Pregenerated sensors for FAM83E (Mus musculus)
Ensembl gene IDs: ENSMUSG00000054161Ensembl transcript IDs: ENSMUST00000129507.5
Found 110 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTAGTGAGCTCACCCAATTCTAGAGCAATTAAGACCAGTCCCTTCTaGTGCCAAGATCCTAGACTACAGGCCTCACATACAGCCAATGTC | + |
|
Preference number: 1 (lower is better) Translates to: LVSSPNSRAIKTSPF*CQDPRLQASHTANV Trigger: GACATTGGCTGTATGTGAGGCCTGTAGTCTAGGATCTTGGCAGCAGAAGGGACTGGTCTTAATTGCTCTAGAATTGGGTGAGCTCACTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| 3UTR-3UTR CCA 90 bp | TCTCCTCTCCTGGACTCAACTTTATCTATGTCTTCTCTGTCGTGGGGTTGCCCCTGCCCATTTCCCAGATaGCAACACCAAGCTCTTAGT | + |
|
Preference number: 2 (lower is better) Translates to: SPLLDSTLSMSSLSWGCPCPFPR*QHQALS Trigger: ACTAAGAGCTTGGTGTTGCCATCTGGGAAATGGGCA...GGGGCAACCCCACGACAGAGAAGACATAGATAAAGTTGAGTCCAGGAGAGGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| 3UTR CAA 90 bp | CATGCTCTGAAGCCTTCCCTTAGCTCCCACAGAAAACTCCAGACATaGTCCAGTGTCTCAGTATCCCCGGTACTTTCCAGACCTTTGTTT | + |
|
Preference number: 2 (lower is better) Translates to: HALKPSLSSHRKLQT*SSVSVSPVLSRPLF Trigger: AAACAAAGGTCTGGAAAGTACCGGGGATACTGAGACACTGGACAATGTCTGGAGTTTTCTGTGGGAGCTAAGGGAAGGCTTCAGAGCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| 3UTR-3UTR GCA 90 bp | TCCAGACATTGTCCAGTGTCTCAGTATCCCCGGTACTTTCCAGACCTTTGTTTTACCAGTCCCTTCTGCTaGCAAGATCCTAGACTACAG | + |
|
Preference number: 2 (lower is better) Translates to: SRHCPVSQYPRYFPDLCFTSPFC*QDPRLQ Trigger: CTGTAGTCTAGGATCTTGGCAGCAGAAGGGACTGGT...AAAACAAAGGTCTGGAAAGTACCGGGGATACTGAGACACTGGACAATGTCTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| 3UTR-3UTR GCA 90 bp | TATCTATGTCTTCTCTGTCGTGGGGTTGCCCCACTATCTCTTTATATAGTACATTGCAGCAGTCCTGTCTaGTGCTCTGGACCTCTCTGC | + |
|
Preference number: 2 (lower is better) Translates to: YLCLLCRGVAPLSLYIVHCSSPV*CSGPLC Trigger: GCAGAGAGGTCCAGAGCAGCAGACAGGACTGCTGCA...ATGTACTATATAAAGAGATAGTGGGGCAACCCCACGACAGAGAAGACATAGATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| 3UTR-3UTR CCA 90 bp | ACAGAAAACTCCAGACATTGTCCAGTGTCTCAGTATCCCCGGTACTTTCCAGACTTAATTCTCCTCTCCTaGACTCAACTTTATCTATGT | + |
|
Preference number: 2 (lower is better) Translates to: TENSRHCPVSQYPRYFPDLILLS*TQLYLC Trigger: ACATAGATAAAGTTGAGTCCAGGAGAGGAGAATTAA...GTCTGGAAAGTACCGGGGATACTGAGACACTGGACAATGTCTGGAGTTTTCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| 3UTR GCA 72 bp | CTCTGCAGCAGTCCTGTCTGCTGCTCTGGACCTCTCTaGCCATTTCCCAGATGGCAACACCAAGCTCTTAGT | + |
|
Preference number: 3 (lower is better) Translates to: LCSSPVCCSGPL*PFPRWQHQALS Trigger: ACTAAGAGCTTGGTGTTGCCATCTGGGAAATGGGCAGAGAGGTCCAGAGCAGCAGACAGGACTGCTGCAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| 3UTR TCA 72 bp | TGGAGTTTAATCCGAGTAGAATACAGGGACATGCTCTaGAGCCTTCCCTTAGCTCCCACAGAAAACTCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: WSLIRVEYRDML*SLPLAPTENSR Trigger: TCTGGAGTTTTCTGTGGGAGCTAAGGGAAGGCTTCAGAGCATGTCCCTGTATTCTACTCGGATTAAACTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| 3UTR GCA 72 bp | TCACCCAATTCTAGAGCAATTAAGACCAGTCCCTTCTaGTGCCAAGATCCTAGACTACAGGCCTCACATACA | + |
|
Preference number: 3 (lower is better) Translates to: SPNSRAIKTSPF*CQDPRLQASHT Trigger: TGTATGTGAGGCCTGTAGTCTAGGATCTTGGCAGCAGAAGGGACTGGTCTTAATTGCTCTAGAATTGGGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| 3UTR CCA 72 bp | CTCCTGGACTCAACTTTATCTATGTCTTCTCTGTCGTaGGGTTGCCCCACTATCTCTTTATATAGTACATGG | + |
|
Preference number: 3 (lower is better) Translates to: LLDSTLSMSSLS*GCPTISLYSTW Trigger: CCATGTACTATATAAAGAGATAGTGGGGCAACCCCACGACAGAGAAGACATAGATAAAGTTGAGTCCAGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS-3UTR TCA 90 bp | CCTGTCTCTGCAGCAGTCCTGTCTGCTGCTCTGGACCTCTCTGCCCATTTCCCACAGGCAGCCAGGCGTTaGGCCAAAGGCCCATCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: PVSAAVLSAALDLSAHFPQAARR*AKGPSD Trigger: GTCTGATGGGCCTTTGGCTCAACGCCTGGCTGCCTG...TGGGAAATGGGCAGAGAGGTCCAGAGCAGCAGACAGGACTGCTGCAGAGACAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS-3UTR CCA 90 bp | CCTGTCTCTGCAGCAGTCCTGTCTGCTGCTCTGGACCTCTCTGCCCATTTCCCAAACTTCTCCCGCACATaGCCGCTCACCTGCCGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: PVSAAVLSAALDLSAHFPNFSRT*PLTCRR Trigger: GCGACGGCAGGTGAGCGGCCATGTGCGGGAGAAGTT...TGGGAAATGGGCAGAGAGGTCCAGAGCAGCAGACAGGACTGCTGCAGAGACAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS-3UTR CCA 90 bp | CCTGTCTCTGCAGCAGTCCTGTCTGCTGCTCTGGACCTCTCTGCCCATTTCCCACTTGAGCCAGAGAGCTaGGACAGGCGGCTAAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PVSAAVLSAALDLSAHFPLEPES*DRRLRS Trigger: GGACCTTAGCCGCCTGTCCCAGCTCTCTGGCTCAAG...TGGGAAATGGGCAGAGAGGTCCAGAGCAGCAGACAGGACTGCTGCAGAGACAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS-3UTR TCA 90 bp | GGACCTCTCTGCCCATTTCCCAGATGGCAACACCAAGCTCTTAGTGAGCTCACCGGCCCTCAGGAGGACTaGACAAAGGGCTTCGAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: GPLCPFPRWQHQALSELTGPQED*TKGFEP Trigger: CGGCTCGAAGCCCTTTGTTCAGTCCTCCTGAGGGCC...GGTGAGCTCACTAAGAGCTTGGTGTTGCCATCTGGGAAATGGGCAGAGAGGTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS-3UTR TCA 90 bp | GGACCTCTCTGCCCATTTCCCAGATGGCAACACCAAGCTCTTAGTGAGCTCACCGCTCCGGTGCAGGCGTaGGTCACTCCATGTGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GPLCPFPRWQHQALSELTAPVQA*VTPCEA Trigger: AGCTTCACATGGAGTGACTCACGCCTGCACCGGAGC...GGTGAGCTCACTAAGAGCTTGGTGTTGCCATCTGGGAAATGGGCAGAGAGGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS-3UTR GCA 90 bp | GTCCTGTCTGCTGCTCTGGACCTCTCTGCCCATTTCCCAGATGGCAACACCAAGGGCAACCTCTCCTGCTaGACACAGGCCCAGAAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: VLSAALDLSAHFPDGNTKGNLSC*TQAQKV Trigger: GACTTTCTGGGCCTGTGTGCAGCAGGAGAGGTTGCC...CTTGGTGTTGCCATCTGGGAAATGGGCAGAGAGGTCCAGAGCAGCAGACAGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS-3UTR GCA 90 bp | ACAGAAAACTCCAGACATTGTCCAGTGTCTCAGTATCCCCGGTACTTTCCAGACACATGGCCGCTCACCTaGCGTCGCCTGCGGCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TENSRHCPVSQYPRYFPDTWPLT*RRLRLW Trigger: CCAGAGCCGCAGGCGACGGCAGGTGAGCGGCCATGT...GTCTGGAAAGTACCGGGGATACTGAGACACTGGACAATGTCTGGAGTTTTCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS-3UTR GCA 90 bp | CATTTCCCAGATGGCAACACCAAGCTCTTAGTGAGCTCACCCAATTCTAGAGCACCTCCAGTGCCCCGCTaGCTCATCAGGGCCCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: HFPDGNTKLLVSSPNSRAPPVPR*LIRALA Trigger: AGCCAGGGCCCTGATGAGGCAGCGGGGCACTGGAGG...TGCTCTAGAATTGGGTGAGCTCACTAAGAGCTTGGTGTTGCCATCTGGGAAATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS-3UTR GCA 90 bp | TCTCCTGGACTCAACTTTATCTATGTCTTCTCTGTCGTGGGGTTGCCCCACTATTGGGCCCACCTCCAGTaGCCCGCTGCCTCATCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SPGLNFIYVFSVVGLPHYWAHLQ*PAASSG Trigger: CCCTGATGAGGCAGCGGGGCACTGGAGGTGGGCCCA...ATAGTGGGGCAACCCCACGACAGAGAAGACATAGATAAAGTTGAGTCCAGGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS-3UTR CCA 90 bp | TCCCTTAGCTCCCACAGAAAACTCCAGACATTGTCCAGTGTCTCAGTATCCCCGTTGGCCCTCGCCTGGTaGCTGGGTGTAGAGTTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: SLSSHRKLQTLSSVSVSPLALAW*LGVELR Trigger: GCGCAACTCTACACCCAGCCACCAGGCGAGGGCCAA...CGGGGATACTGAGACACTGGACAATGTCTGGAGTTTTCTGTGGGAGCTAAGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS-3UTR GCA 90 bp | GAGTTTAATCCGAGTAGAATACAGGGACATGCTCTGAAGCCTTCCCTTAGCTCCTCACCTGCCGTCGCCTaGGGCTCTGGAAGGTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: EFNPSRIQGHALKPSLSSSPAVA*GSGRCG Trigger: GCCACACCTTCCAGAGCCGCAGGCGACGGCAGGTGA...GGAGCTAAGGGAAGGCTTCAGAGCATGTCCCTGTATTCTACTCGGATTAAACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS-3UTR CCA 90 bp | CTTCCCTTAGCTCCCACAGAAAACTCCAGACATTGTCCAGTGTCTCAGTATCCCCGGCTCTGGAAGGTGTaGCCCTGCACGGTCCGGATA | + |
|
Preference number: 4 (lower is better) Translates to: LPLAPTENSRHCPVSQYPRLWKV*PCTVRI Trigger: TATCCGGACCGTGCAGGGCCACACCTTCCAGAGCCG...GGGATACTGAGACACTGGACAATGTCTGGAGTTTTCTGTGGGAGCTAAGGGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS-3UTR CCA 90 bp | ACAGAAAACTCCAGACATTGTCCAGTGTCTCAGTATCCCCGGTACTTTCCAGACGCTTCGGGGCAGCTGTaGGCCCTCAGGAGGACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: TENSRHCPVSQYPRYFPDASGQL*ALRRTE Trigger: TTCAGTCCTCCTGAGGGCCCACAGCTGCCCCGAAGC...GTCTGGAAAGTACCGGGGATACTGAGACACTGGACAATGTCTGGAGTTTTCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS-3UTR CCA 90 bp | TCTCCTGGACTCAACTTTATCTATGTCTTCTCTGTCGTGGGGTTGCCCCACTATGAGCTGGCCCCGTGGTaGTGGGGGTCTCCTGTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SPGLNFIYVFSVVGLPHYELAPW*WGSPVC Trigger: ACAAACAGGAGACCCCCACCACCACGGGGCCAGCTC...ATAGTGGGGCAACCCCACGACAGAGAAGACATAGATAAAGTTGAGTCCAGGAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS-3UTR GCA 90 bp | CCTGTCTCTGCAGCAGTCCTGTCTGCTGCTCTGGACCTCTCTGCCCATTTCCCACTGGTTGAAGGCATCTaGAATTTCTCCTGTGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: PVSAAVLSAALDLSAHFPLVEGI*NFSCEQ Trigger: TTGCTCACAGGAGAAATTGCAGATGCCTTCAACCAG...TGGGAAATGGGCAGAGAGGTCCAGAGCAGCAGACAGGACTGCTGCAGAGACAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS-3UTR CCA 90 bp | TCCAGACATTGTCCAGTGTCTCAGTATCCCCGGTACTTTCCAGACCTTTGTTTTGGGTCGGGGGACCACTaGTTGTCCTGGTGCGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: SRHCPVSQYPRYFPDLCFGSGDH*LSWCAV Trigger: TACAGCGCACCAGGACAACCAGTGGTCCCCCGACCC...AAAACAAAGGTCTGGAAAGTACCGGGGATACTGAGACACTGGACAATGTCTGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS-3UTR CCA 90 bp | TCCAGACATTGTCCAGTGTCTCAGTATCCCCGGTACTTTCCAGACCTTTGTTTTTCGAGTGCCAGCCGCTaGCCCTCAGAGTACAAGACG | + |
|
Preference number: 4 (lower is better) Translates to: SRHCPVSQYPRYFPDLCFSSASR*PSEYKT Trigger: CGTCTTGTACTCTGAGGGCCAGCGGCTGGCACTCGA...AAAACAAAGGTCTGGAAAGTACCGGGGATACTGAGACACTGGACAATGTCTGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS-3UTR CCA 90 bp | CTTCCCTTAGCTCCCACAGAAAACTCCAGACATTGTCCAGTGTCTCAGTATCCCAGGCCCAGTCTGATGTaGTGGCATTGTCCCCCAATC | + |
|
Preference number: 4 (lower is better) Translates to: LPLAPTENSRHCPVSQYPRPSLM*WHCPPI Trigger: GATTGGGGGACAATGCCACCACATCAGACTGGGCCT...GGGATACTGAGACACTGGACAATGTCTGGAGTTTTCTGTGGGAGCTAAGGGAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS-3UTR TCA 90 bp | CTCAACTTTATCTATGTCTTCTCTGTCGTGGGGTTGCCCCACTATCTCTTTATAAGAGTTGCGCCCGGGTaGTGCCCTTCCAGGCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LNFIYVFSVVGLPHYLFIRVAPG*CPSRQC Trigger: ACACTGCCTGGAAGGGCATCACCCGGGCGCAACTCT...TATAAAGAGATAGTGGGGCAACCCCACGACAGAGAAGACATAGATAAAGTTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS-3UTR GCA 90 bp | CATTTCCCAGATGGCAACACCAAGCTCTTAGTGAGCTCACCCAATTCTAGAGCAAGGTTCACCCCTAACTaGTGGGCTAGTGCCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: HFPDGNTKLLVSSPNSRARFTPN*WASARK Trigger: CTTCCTGGCACTAGCCCAGCAGTTAGGGGTGAACCT...TGCTCTAGAATTGGGTGAGCTCACTAAGAGCTTGGTGTTGCCATCTGGGAAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS-3UTR TCA 90 bp | CAACTTTATCTATGTCTTCTCTGTCGTGGGGTTGCCCCACTATCTCTTTATATAGCCGTAGCCAGGGCCTaGGCCTCATCTGCACTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: QLYLCLLCRGVAPLSLYIAVARA*ASSALR Trigger: TCTGAGTGCAGATGAGGCTCAGGCCCTGGCTACGGC...TATATAAAGAGATAGTGGGGCAACCCCACGACAGAGAAGACATAGATAAAGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS-3UTR GCA 90 bp | CATTTCCCAGATGGCAACACCAAGCTCTTAGTGAGCTCACCCAATTCTAGAGCAAGGAAGGCAGGCAGATaGTGGTGGTCAAGCAGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: HFPDGNTKLLVSSPNSRARKAGR*WWSSSK Trigger: CTTACTGCTTGACCACCAGCATCTGCCTGCCTTCCT...TGCTCTAGAATTGGGTGAGCTCACTAAGAGCTTGGTGTTGCCATCTGGGAAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS-3UTR CCA 90 bp | CTCTCTGCCCATTTCCCAGATGGCAACACCAAGCTCTTAGTGAGCTCACCCAATAGGACACGGAACTCCTaGTTGAAGGCATCTGCAATT | + |
|
Preference number: 4 (lower is better) Translates to: LSAHFPDGNTKLLVSSPNRTRNS*LKASAI Trigger: AATTGCAGATGCCTTCAACCAGGAGTTCCGTGTCCT...ATTGGGTGAGCTCACTAAGAGCTTGGTGTTGCCATCTGGGAAATGGGCAGAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| 3UTR CAA 72 bp | AAGCCTTCCCTTAGCTCCCACAGAAAACTCCAGACATaGTCCAGTGTCTCAGTATCCCCGGTACTTTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KPSLSSHRKLQT*SSVSVSPVLSR Trigger: TCTGGAAAGTACCGGGGATACTGAGACACTGGACAATGTCTGGAGTTTTCTGTGGGAGCTAAGGGAAGGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS-3UTR TCA 90 bp | CAACTTTATCTATGTCTTCTCTGTCGTGGGGTTGCCCCACTATCTCTTTATATATCCTCAAGATGTCACTaGGAGCTGGCCCCGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QLYLCLLCRGVAPLSLYISSRCH*ELAPWW Trigger: CCACCACGGGGCCAGCTCTCAGTGACATCTTGAGGA...TATATAAAGAGATAGTGGGGCAACCCCACGACAGAGAAGACATAGATAAAGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS-3UTR TCA 90 bp | ATTCTCCTCTCCTGGACTCAACTTTATCTATGTCTTCTCTGTCGTGGGGTTGCCATTTTCACCATCACTTaGGCCAGAGAGCTGGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: ILLSWTQLYLCLLCRGVAIFTIT*ARELGQ Trigger: CTGTCCCAGCTCTCTGGCTCAAGTGATGGTGAAAAT...GGCAACCCCACGACAGAGAAGACATAGATAAAGTTGAGTCCAGGAGAGGAGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS-3UTR TCA 90 bp | CAACTTTATCTATGTCTTCTCTGTCGTGGGGTTGCCCCACTATCTCTTTATATACTGCAATTTCTCCTGTaGGCAAGGTCACCAGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QLYLCLLCRGVAPLSLYILQFLL*ARSPGS Trigger: GGAGCCTGGTGACCTTGCTCACAGGAGAAATTGCAG...TATATAAAGAGATAGTGGGGCAACCCCACGACAGAGAAGACATAGATAAAGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS-3UTR CCA 90 bp | AACTCCAGACATTGTCCAGTGTCTCAGTATCCCCGGTACTTTCCAGACCTTTGTGCAGCCTGGATTTCCTaGTGTACCAACTCTTTAATG | + |
|
Preference number: 4 (lower is better) Translates to: NSRHCPVSQYPRYFPDLCAAWIS*CTNSLM Trigger: CATTAAAGAGTTGGTACACCAGGAAATCCAGGCTGC...ACAAAGGTCTGGAAAGTACCGGGGATACTGAGACACTGGACAATGTCTGGAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS-3UTR CCA 90 bp | TATCTATGTCTTCTCTGTCGTGGGGTTGCCCCACTATCTCTTTATATAGTACATCCCAGTCTGATGTGGTaGCATTGTCCCCCAATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: YLCLLCRGVAPLSLYIVHPSLMW*HCPPIS Trigger: GGAGATTGGGGGACAATGCCACCACATCAGACTGGG...ATGTACTATATAAAGAGATAGTGGGGCAACCCCACGACAGAGAAGACATAGATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS-3UTR CCA 90 bp | TCTCCTGGACTCAACTTTATCTATGTCTTCTCTGTCGTGGGGTTGCCCCACTATAGACCCAGAACTTCTTaGACTCATTTTCACCATCAC | + |
|
Preference number: 4 (lower is better) Translates to: SPGLNFIYVFSVVGLPHYRPRTS*THFHHH Trigger: GTGATGGTGAAAATGAGTCCAAGAAGTTCTGGGTCT...ATAGTGGGGCAACCCCACGACAGAGAAGACATAGATAAAGTTGAGTCCAGGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS GCA 90 bp | TCACCGTCCAGGAGCACGAACTTCTCCCGCACATGGCCGCTCACCTaGCGTCGCCTGCGGCTCTGGAAGGTGTGGCCCTGCACGGTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: SPSRSTNFSRTWPLT*RRLRLWKVWPCTVR Trigger: CCGGACCGTGCAGGGCCACACCTTCCAGAGCCGCAGGCGACGGCAGGTGAGCGGCCATGTGCGGGAGAAGTTCGTGCTCCTGGACGGTGA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS TCA 90 bp | CCACACGGTGTGGGCTTCGGGGCAGCTGTGGGCCCTCAGGAGGACTaGACAAAGGGCTTCGAGCCGGAGCTGCAGAGAGCGGCCTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: PHGVGFGAAVGPQED*TKGFEPELQRAAWR Trigger: CCTCCAGGCCGCTCTCTGCAGCTCCGGCTCGAAGCCCTTTGTTCAGTCCTCCTGAGGGCCCACAGCTGCCCCGAAGCCCACACCGTGTGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS GCA 90 bp | GCCCTTCCAGGCAGTGTCTTCAGGCCAGCCAAGCCGCAGCAGGGGTaGCGGCTCCTCAGATTGCCTCGGCCAGTAGGTCAGGCTGCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: ALPGSVFRPAKPQQG*RLLRLPRPVGQAAH Trigger: GTGGGCAGCCTGACCTACTGGCCGAGGCAATCTGAGGAGCCGGCACCCCTGCTGCGGCTTGGCTGGCCTGAAGACACTGCCTGGAAGGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS CCA 90 bp | CACAGGACAGCGCAGGGCCACACGGTGTGGGCTTCGGGGCAGCTGTaGGCCCTCAGGAGGACTGAACAAAGGGCTTCGAGCCGGAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: HRTAQGHTVWASGQL*ALRRTEQRASSRSC Trigger: GCAGCTCCGGCTCGAAGCCCTTTGTTCAGTCCTCCTGAGGGCCCACAGCTGCCCCGAAGCCCACACCGTGTGGCCCTGCGCTGTCCTGTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS TCA 90 bp | GTGGTTGGCCCTCGCCTGGTGGCTGGGTGTAGAGTTGCGCCCGGGTaGTGCCCTTCCAGGCAGTGTCTTCAGGCCAGCCAAGCCGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: VVGPRLVAGCRVAPG*CPSRQCLQASQAAA Trigger: TGCTGCGGCTTGGCTGGCCTGAAGACACTGCCTGGAAGGGCATCACCCGGGCGCAACTCTACACCCAGCCACCAGGCGAGGGCCAACCAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS GCA 90 bp | GGAGCACGAACTTCTCCCGCACATGGCCGCTCACCTGCCGTCGCCTaGGGCTCTGGAAGGTGTGGCCCTGCACGGTCCGGATATCCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: GARTSPAHGRSPAVA*GSGRCGPARSGYPG Trigger: ACCTGGATATCCGGACCGTGCAGGGCCACACCTTCCAGAGCCGCAGGCGACGGCAGGTGAGCGGCCATGTGCGGGAGAAGTTCGTGCTCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS CCA 90 bp | CGCACATGGCCGCTCACCTGCCGTCGCCTGCGGCTCTGGAAGGTGTaGCCCTGCACGGTCCGGATATCCAGGTTCTCAGTGGTCCACAGG | + |
|
Preference number: 5 (lower is better) Translates to: RTWPLTCRRLRLWKV*PCTVRISRFSVVHR Trigger: CCTGTGGACCACTGAGAACCTGGATATCCGGACCGTGCAGGGCCACACCTTCCAGAGCCGCAGGCGACGGCAGGTGAGCGGCCATGTGCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS CCA 90 bp | GAGATGACCCTGTCACCGTCCAGGAGCACGAACTTCTCCCGCACATaGCCGCTCACCTGCCGTCGCCTGCGGCTCTGGAAGGTGTGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: EMTLSPSRSTNFSRT*PLTCRRLRLWKVWP Trigger: GGGCCACACCTTCCAGAGCCGCAGGCGACGGCAGGTGAGCGGCCATGTGCGGGAGAAGTTCGTGCTCCTGGACGGTGACAGGGTCATCTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS GCA 90 bp | TGGCCGCTCACCTGCCGTCGCCTGCGGCTCTGGAAGGTGTGGCCCTaGACGGTCCGGATATCCAGGTTCTCAGTGGTCCACAGGTTCACC | + |
|
Preference number: 5 (lower is better) Translates to: WPLTCRRLRLWKVWP*TVRISRFSVVHRFT Trigger: GGTGAACCTGTGGACCACTGAGAACCTGGATATCCGGACCGTGCAGGGCCACACCTTCCAGAGCCGCAGGCGACGGCAGGTGAGCGGCCA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS CCA 90 bp | CTTCGAGTGCCAGCCGCTGGCCCTCAGAGTACAAGACGGCAGGGCTaGCCTTCGTTAGGGCTGGCTCGCCAGCCCCCAACTCCTCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: LRVPAAGPQSTRRQG*PSLGLARQPPTPLL Trigger: AAGGAGAGGAGTTGGGGGCTGGCGAGCCAGCCCTAACGAAGGCCAGCCCTGCCGTCTTGTACTCTGAGGGCCAGCGGCTGGCACTCGAAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS GCA 90 bp | ACAGGCCCAGAAAGTCTCCTCGCCACTGCTCAGCAGGGCTTCGAGTaGCAGCCGCTGGCCCTCAGAGTACAAGACGGCAGGGCTGGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: TGPESLLATAQQGFE*QPLALRVQDGRAGL Trigger: AAGGCCAGCCCTGCCGTCTTGTACTCTGAGGGCCAGCGGCTGGCACTCGAAGCCCTGCTGAGCAGTGGCGAGGAGACTTTCTGGGCCTGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS GCA 90 bp | CTGTGGGCCCTCAGGAGGACTGAACAAAGGGCTTCGAGCCGGAGCTaGAGAGAGCGGCCTGGAGGCTGCGTACAGGACACGGAACTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: LWALRRTEQRASSRS*RERPGGCVQDTELL Trigger: CAGGAGTTCCGTGTCCTGTACGCAGCCTCCAGGCCGCTCTCTGCAGCTCCGGCTCGAAGCCCTTTGTTCAGTCCTCCTGAGGGCCCACAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS GCA 90 bp | AGGGCTGTGAACGGGAATCCATCTCAGCTCTGGGCCCACCTCCAGTaGCCCGCTGCCTCATCAGGGCCCTGGCTGGAGTGTCCTTGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: RAVNGNPSQLWAHLQ*PAASSGPWLECPWR Trigger: TCTCCAAGGACACTCCAGCCAGGGCCCTGATGAGGCAGCGGGGCACTGGAGGTGGGCCCAGAGCTGAGATGGATTCCCGTTCACAGCCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS CCA 90 bp | AACTTCTCCCGCACATGGCCGCTCACCTGCCGTCGCCTGCGGCTCTaGAAGGTGTGGCCCTGCACGGTCCGGATATCCAGGTTCTCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: NFSRTWPLTCRRLRL*KVWPCTVRISRFSV Trigger: CACTGAGAACCTGGATATCCGGACCGTGCAGGGCCACACCTTCCAGAGCCGCAGGCGACGGCAGGTGAGCGGCCATGTGCGGGAGAAGTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS GCA 90 bp | GCAACCTCTCCTGCTGCACACAGGCCCAGAAAGTCTCCTCGCCACTaGTCAGCAGGGCTTCGAGTGCCAGCCGCTGGCCCTCAGAGTACA | + |
|
Preference number: 5 (lower is better) Translates to: ATSPAAHRPRKSPRH*SAGLRVPAAGPQST Trigger: TGTACTCTGAGGGCCAGCGGCTGGCACTCGAAGCCCTGCTGAGCAGTGGCGAGGAGACTTTCTGGGCCTGTGTGCAGCAGGAGAGGTTGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS TCA 90 bp | GACCACTGGTTGTCCTGGTGCGCTGTACACTCCTCAAGATGTCACTaGGAGCTGGCCCCGTGGTGGTGGGGGTCTCCTGTTTGTCCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: DHWLSWCAVHSSRCH*ELAPWWWGSPVCPA Trigger: AGCGGGACAAACAGGAGACCCCCACCACCACGGGGCCAGCTCTCAGTGACATCTTGAGGAGTGTACAGCGCACCAGGACAACCAGTGGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS CCA 90 bp | GGTTGTCCTGGTGCGCTGTACACTCCTCAAGATGTCACTGAGAGCTaGCCCCGTGGTGGTGGGGGTCTCCTGTTTGTCCCGCTCGAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: GCPGALYTPQDVTES*PRGGGGLLFVPLED Trigger: ATCCTCGAGCGGGACAAACAGGAGACCCCCACCACCACGGGGCCAGCTCTCAGTGACATCTTGAGGAGTGTACAGCGCACCAGGACAACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS GCA 90 bp | CCTGGAGGCTGCGTACAGGACACGGAACTCCTGGTTGAAGGCATCTaGAATTTCTCCTGTGAGCAAGGTCACCAGGCTCCGGTGCAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: PGGCVQDTELLVEGI*NFSCEQGHQAPVQA Trigger: CGCCTGCACCGGAGCCTGGTGACCTTGCTCACAGGAGAAATTGCAGATGCCTTCAACCAGGAGTTCCGTGTCCTGTACGCAGCCTCCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS CCA 90 bp | TTCCTGGTGTACCAACTCTTTAATGGGTGGTTGGCCCTCGCCTGGTaGCTGGGTGTAGAGTTGCGCCCGGGTGATGCCCTTCCAGGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: FLVYQLFNGWLALAW*LGVELRPGDALPGS Trigger: ACTGCCTGGAAGGGCATCACCCGGGCGCAACTCTACACCCAGCCACCAGGCGAGGGCCAACCACCCATTAAAGAGTTGGTACACCAGGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS CCA 90 bp | GATTTCCTGGTGTACCAACTCTTTAATGGGTGGTTGGCCCTCGCCTaGTGGCTGGGTGTAGAGTTGCGCCCGGGTGATGCCCTTCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: DFLVYQLFNGWLALA*WLGVELRPGDALPG Trigger: GCCTGGAAGGGCATCACCCGGGCGCAACTCTACACCCAGCCACCAGGCGAGGGCCAACCACCCATTAAAGAGTTGGTACACCAGGAAATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS-3UTR CAA 90 bp | GTCCTGTCTGCTGCTCTGGACCTCTCTGCCCATTTCCCAGATGGCAACACCAAGTGCCGGCTCCTCAGATaGCCTCGGCCAGTAGGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: VLSAALDLSAHFPDGNTKCRLLR*PRPVGQ Trigger: CTGACCTACTGGCCGAGGCAATCTGAGGAGCCGGCA...CTTGGTGTTGCCATCTGGGAAATGGGCAGAGAGGTCCAGAGCAGCAGACAGGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS GCA 90 bp | GAACAAAGGGCTTCGAGCCGGAGCTGCAGAGAGCGGCCTGGAGGCTaGGTACAGGACACGGAACTCCTGGTTGAAGGCATCTGCAATTTC | + |
|
Preference number: 5 (lower is better) Translates to: EQRASSRSCRERPGG*VQDTELLVEGICNF Trigger: GAAATTGCAGATGCCTTCAACCAGGAGTTCCGTGTCCTGTACGCAGCCTCCAGGCCGCTCTCTGCAGCTCCGGCTCGAAGCCCTTTGTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS CCA 90 bp | CTTTCGAGCAGCCTGGATTTCCTGGTGTACCAACTCTTTAATGGGTaGTTGGCCCTCGCCTGGTGGCTGGGTGTAGAGTTGCGCCCGGGT | + |
|
Preference number: 5 (lower is better) Translates to: LSSSLDFLVYQLFNG*LALAWWLGVELRPG Trigger: ACCCGGGCGCAACTCTACACCCAGCCACCAGGCGAGGGCCAACCACCCATTAAAGAGTTGGTACACCAGGAAATCCAGGCTGCTCGAAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS CCA 90 bp | GCTGCAGAGAGCGGCCTGGAGGCTGCGTACAGGACACGGAACTCCTaGTTGAAGGCATCTGCAATTTCTCCTGTGAGCAAGGTCACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: AAESGLEAAYRTRNS*LKASAISPVSKVTR Trigger: CCTGGTGACCTTGCTCACAGGAGAAATTGCAGATGCCTTCAACCAGGAGTTCCGTGTCCTGTACGCAGCCTCCAGGCCGCTCTCTGCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS CCA 90 bp | CAGAACTTCTTGGACTCATTTTCACCATCACTTGAGCCAGAGAGCTaGGACAGGCGGCTAAGGTCCCATAGGGAGCGGCTGGGTCGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: QNFLDSFSPSLEPES*DRRLRSHRERLGRV Trigger: GACCCGACCCAGCCGCTCCCTATGGGACCTTAGCCGCCTGTCCCAGCTCTCTGGCTCAAGTGATGGTGAAAATGAGTCCAAGAAGTTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS TCA 90 bp | TGCAATTTCTCCTGTGAGCAAGGTCACCAGGCTCCGGTGCAGGCGTaGGTCACTCCATGTGAAGCTGTAGGATCCCGAGATGACCCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: CNFSCEQGHQAPVQA*VTPCEAVGSRDDPV Trigger: GACAGGGTCATCTCGGGATCCTACAGCTTCACATGGAGTGACTCACGCCTGCACCGGAGCCTGGTGACCTTGCTCACAGGAGAAATTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS CCA 90 bp | ACATCCATGACTACAGCCACCAGCTTTCGAGCAGCCTGGATTTCCTaGTGTACCAACTCTTTAATGGGTGGTTGGCCCTCGCCTGGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: TSMTTATSFRAAWIS*CTNSLMGGWPSPGG Trigger: GCCACCAGGCGAGGGCCAACCACCCATTAAAGAGTTGGTACACCAGGAAATCCAGGCTGCTCGAAAGCTGGTGGCTGTAGTCATGGATGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS-3UTR CAA 90 bp | TCTCCTCTCCTGGACTCAACTTTATCTATGTCTTCTCTGTCGTGGGGTTGCCCCACAGGCAGCCAGGCGTaGAGCCAAAGGCCCATCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SPLLDSTLSMSSLSWGCPTGSQA*SQRPIR Trigger: TCTGATGGGCCTTTGGCTCAACGCCTGGCTGCCTGT...GGGGCAACCCCACGACAGAGAAGACATAGATAAAGTTGAGTCCAGGAGAGGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS-3UTR CAA 90 bp | CAACTTTATCTATGTCTTCTCTGTCGTGGGGTTGCCCCACTATCTCTTTATATATGGCTGGGTGTAGAGTaGCGCCCGGGTGATGCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: QLYLCLLCRGVAPLSLYIWLGVE*RPGDAL Trigger: AAGGGCATCACCCGGGCGCAACTCTACACCCAGCCA...TATATAAAGAGATAGTGGGGCAACCCCACGACAGAGAAGACATAGATAAAGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS-3UTR CAA 90 bp | CTTCCCTTAGCTCCCACAGAAAACTCCAGACATTGTCCAGTGTCTCAGTATCCCGAGACCCAGAACTTCTaGGACTCATTTTCACCATCA | + |
|
Preference number: 5 (lower is better) Translates to: LPLAPTENSRHCPVSQYPETQNF*DSFSPS Trigger: TGATGGTGAAAATGAGTCCAAGAAGTTCTGGGTCTC...GGGATACTGAGACACTGGACAATGTCTGGAGTTTTCTGTGGGAGCTAAGGGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS-3UTR CAA 90 bp | CTCAACTTTATCTATGTCTTCTCTGTCGTGGGGTTGCCCCACTATCTCTTTATACTGGCTGGAGTGTCCTaGGAGACCCAGAACTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LNFIYVFSVVGLPHYLFILAGVS*ETQNFL Trigger: CAAGAAGTTCTGGGTCTCCAAGGACACTCCAGCCAG...TATAAAGAGATAGTGGGGCAACCCCACGACAGAGAAGACATAGATAAAGTTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS-3UTR CAA 90 bp | CAACTTTATCTATGTCTTCTCTGTCGTGGGGTTGCCCCACTATCTCTTTATATAACACGGAACTCCTGGTaGAAGGCATCTGCAATTTCT | + |
|
Preference number: 5 (lower is better) Translates to: QLYLCLLCRGVAPLSLYITRNSW*KASAIS Trigger: AGAAATTGCAGATGCCTTCAACCAGGAGTTCCGTGT...TATATAAAGAGATAGTGGGGCAACCCCACGACAGAGAAGACATAGATAAAGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS GCA 72 bp | ACTTCTCCCGCACATGGCCGCTCACCTGCCGTCGCCTaGGGCTCTGGAAGGTGTGGCCCTGCACGGTCCGGA | + |
|
Preference number: 6 (lower is better) Translates to: TSPAHGRSPAVA*GSGRCGPARSG Trigger: TCCGGACCGTGCAGGGCCACACCTTCCAGAGCCGCAGGCGACGGCAGGTGAGCGGCCATGTGCGGGAGAAGT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS CCA 72 bp | CGCACATGGCCGCTCACCTGCCGTCGCCTGCGGCTCTaGAAGGTGTGGCCCTGCACGGTCCGGATATCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: RTWPLTCRRLRL*KVWPCTVRISR Trigger: CCTGGATATCCGGACCGTGCAGGGCCACACCTTCCAGAGCCGCAGGCGACGGCAGGTGAGCGGCCATGTGCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS CCA 72 bp | TACAGGGGCCACAGGACAGCGCAGGGCCACACGGTGTaGGCTTCGGGGCAGCTGTGGGCCCTCAGGAGGACT | + |
|
Preference number: 6 (lower is better) Translates to: YRGHRTAQGHTV*ASGQLWALRRT Trigger: AGTCCTCCTGAGGGCCCACAGCTGCCCCGAAGCCCACACCGTGTGGCCCTGCGCTGTCCTGTGGCCCCTGTA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS GCA 72 bp | AGGAGCACGAACTTCTCCCGCACATGGCCGCTCACCTaGCGTCGCCTGCGGCTCTGGAAGGTGTGGCCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: RSTNFSRTWPLT*RRLRLWKVWPC Trigger: GCAGGGCCACACCTTCCAGAGCCGCAGGCGACGGCAGGTGAGCGGCCATGTGCGGGAGAAGTTCGTGCTCCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS TCA 72 bp | TCGGCCAGTAGGTCAGGCTGCCCACGTCCCCATCGGTaGTGGCTGTTCCCGTGCCTGCTGCACCAGGCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: SASRSGCPRPHR*WLFPCLLHQAP Trigger: AGGAGCCTGGTGCAGCAGGCACGGGAACAGCCATCACCGATGGGGACGTGGGCAGCCTGACCTACTGGCCGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS TCA 72 bp | GTGGGCTTCGGGGCAGCTGTGGGCCCTCAGGAGGACTaGACAAAGGGCTTCGAGCCGGAGCTGCAGAGAGCG | + |
|
Preference number: 6 (lower is better) Translates to: VGFGAAVGPQED*TKGFEPELQRA Trigger: CGCTCTCTGCAGCTCCGGCTCGAAGCCCTTTGTTCAGTCCTCCTGAGGGCCCACAGCTGCCCCGAAGCCCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS GCA 72 bp | CCTGCTGCACACAGGCCCAGAAAGTCTCCTCGCCACTaGTCAGCAGGGCTTCGAGTGCCAGCCGCTGGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: PAAHRPRKSPRH*SAGLRVPAAGP Trigger: AGGGCCAGCGGCTGGCACTCGAAGCCCTGCTGAGCAGTGGCGAGGAGACTTTCTGGGCCTGTGTGCAGCAGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS GCA 72 bp | GGCAGTGTCTTCAGGCCAGCCAAGCCGCAGCAGGGGTaGCGGCTCCTCAGATTGCCTCGGCCAGTAGGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: GSVFRPAKPQQG*RLLRLPRPVGQ Trigger: CTGACCTACTGGCCGAGGCAATCTGAGGAGCCGGCACCCCTGCTGCGGCTTGGCTGGCCTGAAGACACTGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS CCA 72 bp | CCGCTCACCTGCCGTCGCCTGCGGCTCTGGAAGGTGTaGCCCTGCACGGTCCGGATATCCAGGTTCTCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: PLTCRRLRLWKV*PCTVRISRFSV Trigger: CACTGAGAACCTGGATATCCGGACCGTGCAGGGCCACACCTTCCAGAGCCGCAGGCGACGGCAGGTGAGCGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS CCA 72 bp | CTGTCACCGTCCAGGAGCACGAACTTCTCCCGCACATaGCCGCTCACCTGCCGTCGCCTGCGGCTCTGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: LSPSRSTNFSRT*PLTCRRLRLWK Trigger: CTTCCAGAGCCGCAGGCGACGGCAGGTGAGCGGCCATGTGCGGGAGAAGTTCGTGCTCCTGGACGGTGACAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS CAA 72 bp | GGGTGGTTGGCCCTCGCCTGGTGGCTGGGTGTAGAGTaGCGCCCGGGTGATGCCCTTCCAGGCAGTGTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: GWLALAWWLGVE*RPGDALPGSVF Trigger: GAAGACACTGCCTGGAAGGGCATCACCCGGGCGCAACTCTACACCCAGCCACCAGGCGAGGGCCAACCACCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS TCA 72 bp | CCTCGCCTGGTGGCTGGGTGTAGAGTTGCGCCCGGGTaGTGCCCTTCCAGGCAGTGTCTTCAGGCCAGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: PRLVAGCRVAPG*CPSRQCLQASQ Trigger: TTGGCTGGCCTGAAGACACTGCCTGGAAGGGCATCACCCGGGCGCAACTCTACACCCAGCCACCAGGCGAGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS GCA 72 bp | ACCTGCCGTCGCCTGCGGCTCTGGAAGGTGTGGCCCTaGACGGTCCGGATATCCAGGTTCTCAGTGGTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: TCRRLRLWKVWP*TVRISRFSVVH Trigger: GTGGACCACTGAGAACCTGGATATCCGGACCGTGCAGGGCCACACCTTCCAGAGCCGCAGGCGACGGCAGGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS GCA 72 bp | AACGGGAATCCATCTCAGCTCTGGGCCCACCTCCAGTaGCCCGCTGCCTCATCAGGGCCCTGGCTGGAGTGT | + |
|
Preference number: 6 (lower is better) Translates to: NGNPSQLWAHLQ*PAASSGPWLEC Trigger: ACACTCCAGCCAGGGCCCTGATGAGGCAGCGGGGCACTGGAGGTGGGCCCAGAGCTGAGATGGATTCCCGTT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS CCA 72 bp | AGCCAGGCGTTGAGCCAAAGGCCCATCAGACAGCAATaGGGCTACAGGGGCCACAGGACAGCGCAGGGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: SQALSQRPIRQQ*GYRGHRTAQGH Trigger: GTGGCCCTGCGCTGTCCTGTGGCCCCTGTAGCCCCATTGCTGTCTGATGGGCCTTTGGCTCAACGCCTGGCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS GCA 72 bp | GCTTCGAGCCGGAGCTGCAGAGAGCGGCCTGGAGGCTaGGTACAGGACACGGAACTCCTGGTTGAAGGCATC | + |
|
Preference number: 6 (lower is better) Translates to: ASSRSCRERPGG*VQDTELLVEGI Trigger: GATGCCTTCAACCAGGAGTTCCGTGTCCTGTACGCAGCCTCCAGGCCGCTCTCTGCAGCTCCGGCTCGAAGC 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS GCA 72 bp | CTCAGGAGGACTGAACAAAGGGCTTCGAGCCGGAGCTaGAGAGAGCGGCCTGGAGGCTGCGTACAGGACACG | + |
|
Preference number: 6 (lower is better) Translates to: LRRTEQRASSRS*RERPGGCVQDT Trigger: CGTGTCCTGTACGCAGCCTCCAGGCCGCTCTCTGCAGCTCCGGCTCGAAGCCCTTTGTTCAGTCCTCCTGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS CCA 72 bp | CCCATAGGGAGCGGCTGGGTCGGGTCGGGGGACCACTaGTTGTCCTGGTGCGCTGTACACTCCTCAAGATGT | + |
|
Preference number: 6 (lower is better) Translates to: PIGSGWVGSGDH*LSWCAVHSSRC Trigger: ACATCTTGAGGAGTGTACAGCGCACCAGGACAACCAGTGGTCCCCCGACCCGACCCAGCCGCTCCCTATGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS CAA 90 bp | CTCTTTAATGGGTGGTTGGCCCTCGCCTGGTGGCTGGGTGTAGAGTaGCGCCCGGGTGATGCCCTTCCAGGCAGTGTCTTCAGGCCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: LFNGWLALAWWLGVE*RPGDALPGSVFRPA Trigger: GGCTGGCCTGAAGACACTGCCTGGAAGGGCATCACCCGGGCGCAACTCTACACCCAGCCACCAGGCGAGGGCCAACCACCCATTAAAGAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS CCA 72 bp | GTGATGGCTGTTCCCGTGCCTGCTGCACCAGGCTCCTaGCTAGGTACTAGCCAGTCTTCAGCAGCCGTAGCC | + |
|
Preference number: 6 (lower is better) Translates to: VMAVPVPAAPGS*LGTSQSSAAVA Trigger: GGCTACGGCTGCTGAAGACTGGCTAGTACCTAGCCAGGAGCCTGGTGCAGCAGGCACGGGAACAGCCATCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS CAA 72 bp | ATAGGGAGCGGCTGGGTCGGGTCGGGGGACCACTGGTaGTCCTGGTGCGCTGTACACTCCTCAAGATGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: IGSGWVGSGDHW*SWCAVHSSRCH Trigger: GTGACATCTTGAGGAGTGTACAGCGCACCAGGACAACCAGTGGTCCCCCGACCCGACCCAGCCGCTCCCTAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS CCA 72 bp | GTGTACCAACTCTTTAATGGGTGGTTGGCCCTCGCCTaGTGGCTGGGTGTAGAGTTGCGCCCGGGTGATGCC | + |
|
Preference number: 6 (lower is better) Translates to: VYQLFNGWLALA*WLGVELRPGDA Trigger: GGCATCACCCGGGCGCAACTCTACACCCAGCCACCAGGCGAGGGCCAACCACCCATTAAAGAGTTGGTACAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS CCA 72 bp | TCCTTCCAGAGCCTGAGCCAGAGGCCCAGTCTGATGTaGTGGCATTGTCCCCCAATCTCCTTTGGGCTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: SFQSLSQRPSLM*WHCPPISFGLG Trigger: CCCCAGCCCAAAGGAGATTGGGGGACAATGCCACCACATCAGACTGGGCCTCTGGCTCAGGCTCTGGAAGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS TCA 72 bp | TTGTCCTGGTGCGCTGTACACTCCTCAAGATGTCACTaGGAGCTGGCCCCGTGGTGGTGGGGGTCTCCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: LSWCAVHSSRCH*ELAPWWWGSPV Trigger: AACAGGAGACCCCCACCACCACGGGGCCAGCTCTCAGTGACATCTTGAGGAGTGTACAGCGCACCAGGACAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS CCA 72 bp | TACCAACTCTTTAATGGGTGGTTGGCCCTCGCCTGGTaGCTGGGTGTAGAGTTGCGCCCGGGTGATGCCCTT | + |
|
Preference number: 6 (lower is better) Translates to: YQLFNGWLALAW*LGVELRPGDAL Trigger: AAGGGCATCACCCGGGCGCAACTCTACACCCAGCCACCAGGCGAGGGCCAACCACCCATTAAAGAGTTGGTA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS CAA 72 bp | TTTGTCCCGCTCGAGGATGTGACAGGCAGCCAGGCGTaGAGCCAAAGGCCCATCAGACAGCAATGGGGCTAC | + |
|
Preference number: 6 (lower is better) Translates to: FVPLEDVTGSQA*SQRPIRQQWGY Trigger: GTAGCCCCATTGCTGTCTGATGGGCCTTTGGCTCAACGCCTGGCTGCCTGTCACATCCTCGAGCGGGACAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS CAA 90 bp | TCGAGCAGCCTGGATTTCCTGGTGTACCAACTCTTTAATGGGTGGTaGGCCCTCGCCTGGTGGCTGGGTGTAGAGTTGCGCCCGGGTGAT | + |
|
Preference number: 6 (lower is better) Translates to: SSSLDFLVYQLFNGW*ALAWWLGVELRPGD Trigger: ATCACCCGGGCGCAACTCTACACCCAGCCACCAGGCGAGGGCCAACCACCCATTAAAGAGTTGGTACACCAGGAAATCCAGGCTGCTCGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS CAA 90 bp | GCAGAGAGCGGCCTGGAGGCTGCGTACAGGACACGGAACTCCTGGTaGAAGGCATCTGCAATTTCTCCTGTGAGCAAGGTCACCAGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: AESGLEAAYRTRNSW*KASAISPVSKVTRL Trigger: GAGCCTGGTGACCTTGCTCACAGGAGAAATTGCAGATGCCTTCAACCAGGAGTTCCGTGTCCTGTACGCAGCCTCCAGGCCGCTCTCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS CAA 90 bp | CCTCCAGTGCCCCGCTGCCTCATCAGGGCCCTGGCTGGAGTGTCCTaGGAGACCCAGAACTTCTTGGACTCATTTTCACCATCACTTGAG | + |
|
Preference number: 6 (lower is better) Translates to: PPVPRCLIRALAGVS*ETQNFLDSFSPSLE Trigger: CTCAAGTGATGGTGAAAATGAGTCCAAGAAGTTCTGGGTCTCCAAGGACACTCCAGCCAGGGCCCTGATGAGGCAGCGGGGCACTGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS TCA 72 bp | TCCTGTGAGCAAGGTCACCAGGCTCCGGTGCAGGCGTaGGTCACTCCATGTGAAGCTGTAGGATCCCGAGAT | + |
|
Preference number: 6 (lower is better) Translates to: SCEQGHQAPVQA*VTPCEAVGSRD Trigger: ATCTCGGGATCCTACAGCTTCACATGGAGTGACTCACGCCTGCACCGGAGCCTGGTGACCTTGCTCACAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS CCA 72 bp | TTCCAGAGCCTGAGCCAGAGGCCCAGTCTGATGTGGTaGCATTGTCCCCCAATCTCCTTTGGGCTGGGGATA | + |
|
Preference number: 6 (lower is better) Translates to: FQSLSQRPSLMW*HCPPISFGLGI Trigger: TATCCCCAGCCCAAAGGAGATTGGGGGACAATGCCACCACATCAGACTGGGCCTCTGGCTCAGGCTCTGGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS CCA 72 bp | TTGGACTCATTTTCACCATCACTTGAGCCAGAGAGCTaGGACAGGCGGCTAAGGTCCCATAGGGAGCGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LDSFSPSLEPES*DRRLRSHRERL Trigger: CAGCCGCTCCCTATGGGACCTTAGCCGCCTGTCCCAGCTCTCTGGCTCAAGTGATGGTGAAAATGAGTCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS CAA 72 bp | CTGGATTTCCTGGTGTACCAACTCTTTAATGGGTGGTaGGCCCTCGCCTGGTGGCTGGGTGTAGAGTTGCGC | + |
|
Preference number: 6 (lower is better) Translates to: LDFLVYQLFNGW*ALAWWLGVELR Trigger: GCGCAACTCTACACCCAGCCACCAGGCGAGGGCCAACCACCCATTAAAGAGTTGGTACACCAGGAAATCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS CAA 72 bp | GGCCTGGAGGCTGCGTACAGGACACGGAACTCCTGGTaGAAGGCATCTGCAATTTCTCCTGTGAGCAAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: GLEAAYRTRNSW*KASAISPVSKV Trigger: GACCTTGCTCACAGGAGAAATTGCAGATGCCTTCAACCAGGAGTTCCGTGTCCTGTACGCAGCCTCCAGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS GCA 72 bp | TGCGTACAGGACACGGAACTCCTGGTTGAAGGCATCTaGAATTTCTCCTGTGAGCAAGGTCACCAGGCTCCG | + |
|
Preference number: 6 (lower is better) Translates to: CVQDTELLVEGI*NFSCEQGHQAP Trigger: CGGAGCCTGGTGACCTTGCTCACAGGAGAAATTGCAGATGCCTTCAACCAGGAGTTCCGTGTCCTGTACGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS CCA 72 bp | AGCCTGGATTTCCTGGTGTACCAACTCTTTAATGGGTaGTTGGCCCTCGCCTGGTGGCTGGGTGTAGAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: SLDFLVYQLFNG*LALAWWLGVEL Trigger: CAACTCTACACCCAGCCACCAGGCGAGGGCCAACCACCCATTAAAGAGTTGGTACACCAGGAAATCCAGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS CCA 72 bp | ACTACAGCCACCAGCTTTCGAGCAGCCTGGATTTCCTaGTGTACCAACTCTTTAATGGGTGGTTGGCCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: TTATSFRAAWIS*CTNSLMGGWPS Trigger: CGAGGGCCAACCACCCATTAAAGAGTTGGTACACCAGGAAATCCAGGCTGCTCGAAAGCTGGTGGCTGTAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||
| CDS CAA 72 bp | GCCCTGGCTGGAGTGTCCTTGGAGACCCAGAACTTCTaGGACTCATTTTCACCATCACTTGAGCCAGAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: ALAGVSLETQNF*DSFSPSLEPES Trigger: GCTCTCTGGCTCAAGTGATGGTGAAAATGAGTCCAAGAAGTTCTGGGTCTCCAAGGACACTCCAGCCAGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129507.5 |
||