Pregenerated sensors for FAM83D (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027654Ensembl transcript IDs: ENSMUST00000029183.3
Found 121 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCAAACAATGCTGCAGAATCAAAGCAAAGGTGGCCCAGTGTCAGGTaGGAGAGGGTGGCTGGGGCCATGCATGTGAGGCTCTGTTGGCCT | + |
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Preference number: 1 (lower is better) Translates to: SNNAAESKQRWPSVR*ERVAGAMHVRLCWP Trigger: AGGCCAACAGAGCCTCACATGCATGGCCCCAGCCACCCTCTCCCACCTGACACTGGGCCACCTTTGCTTTGATTCTGCAGCATTGTTTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| 3UTR-3UTR CCA 90 bp | GCAGAATCAAAGCAAAGGTGGCCCAGTGTCAGGTGGGAGAGGGTGGCTGGGGCCCATGTGAGGCTCTGTTaGCCTCAGGACAGAGGGCTG | + |
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Preference number: 2 (lower is better) Translates to: AESKQRWPSVRWERVAGAHVRLC*PQDRGL Trigger: CAGCCCTCTGTCCTGAGGCCAACAGAGCCTCACATG...GGCCCCAGCCACCCTCTCCCACCTGACACTGGGCCACCTTTGCTTTGATTCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| 3UTR CCA 72 bp | GCTGCAGAATCAAAGCAAAGGTGGCCCAGTGTCAGGTaGGAGAGGGTGGCTGGGGCCATGCATGTGAGGCTC | + |
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Preference number: 3 (lower is better) Translates to: AAESKQRWPSVR*ERVAGAMHVRL Trigger: GAGCCTCACATGCATGGCCCCAGCCACCCTCTCCCACCTGACACTGGGCCACCTTTGCTTTGATTCTGCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS-3UTR TCA 90 bp | TGCAGAATCAAAGCAAAGGTGGCCCAGTGTCAGGTGGGAGAGGGTGGCTGGGGCCCGCGGGGCTGGAAATaGGCCTCGACACGCGTGGCA | + |
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Preference number: 4 (lower is better) Translates to: CRIKAKVAQCQVGEGGWGPRGWK*ASTRVA Trigger: TGCCACGCGTGTCGAGGCTCATTTCCAGCCCCGCGG...GCCCCAGCCACCCTCTCCCACCTGACACTGGGCCACCTTTGCTTTGATTCTGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS-3UTR GCA 90 bp | GTGGGAGAGGGTGGCTGGGGCCATGCATGTGAGGCTCTGTTGGCCTCAGGACAGAGGCACAGATCCAGATaGGGGGTGCCCAGACCCAGG | + |
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Preference number: 4 (lower is better) Translates to: VGEGGWGHACEALLASGQRHRSR*GVPRPR Trigger: CCTGGGTCTGGGCACCCCGCATCTGGATCTGTGCCT...CTGTCCTGAGGCCAACAGAGCCTCACATGCATGGCCCCAGCCACCCTCTCCCAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS-3UTR CCA 90 bp | GAATCAAAGCAAAGGTGGCCCAGTGTCAGGTGGGAGAGGGTGGCTGGGGCCATGGAGCCTCGACACGCGTaGCACCGCGGTAGGCACCCT | + |
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Preference number: 4 (lower is better) Translates to: ESKQRWPSVRWERVAGAMEPRHA*HRGRHP Trigger: AGGGTGCCTACCGCGGTGCCACGCGTGTCGAGGCTC...CATGGCCCCAGCCACCCTCTCCCACCTGACACTGGGCCACCTTTGCTTTGATTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS-3UTR CCA 90 bp | GCAGAATCAAAGCAAAGGTGGCCCAGTGTCAGGTGGGAGAGGGTGGCTGGGGCCGACCACACTGTGGCCTaGGAGCTCGCTGCCCTGGTG | + |
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Preference number: 4 (lower is better) Translates to: AESKQRWPSVRWERVAGADHTVA*ELAALV Trigger: CACCAGGGCAGCGAGCTCCCAGGCCACAGTGTGGTC...GGCCCCAGCCACCCTCTCCCACCTGACACTGGGCCACCTTTGCTTTGATTCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS-3UTR TCA 90 bp | TGCAGAATCAAAGCAAAGGTGGCCCAGTGTCAGGTGGGAGAGGGTGGCTGGGGCCCCGACGAGCATTCGTaGGAGGAGCCGAACGAGTCC | + |
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Preference number: 4 (lower is better) Translates to: CRIKAKVAQCQVGEGGWGPDEHS*EEPNES Trigger: GGACTCGTTCGGCTCCTCTCACGAATGCTCGTCGGG...GCCCCAGCCACCCTCTCCCACCTGACACTGGGCCACCTTTGCTTTGATTCTGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS-3UTR TCA 90 bp | GTGGGAGAGGGTGGCTGGGGCCATGCATGTGAGGCTCTGTTGGCCTCAGGACAGTTGGACTGGGCACCCTaGGGAAGGAAGCTCTCGTCA | + |
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Preference number: 4 (lower is better) Translates to: VGEGGWGHACEALLASGQLDWAP*GRKLSS Trigger: TGACGAGAGCTTCCTTCCTCAGGGTGCCCAGTCCAA...CTGTCCTGAGGCCAACAGAGCCTCACATGCATGGCCCCAGCCACCCTCTCCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS-3UTR CCA 90 bp | GTGGGAGAGGGTGGCTGGGGCCATGCATGTGAGGCTCTGTTGGCCTCAGGACAGGGGCTCCTTCGACTGTaGCTTTCGGTCAGCCAGATG | + |
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Preference number: 4 (lower is better) Translates to: VGEGGWGHACEALLASGQGLLRL*LSVSQM Trigger: CATCTGGCTGACCGAAAGCCACAGTCGAAGGAGCCC...CTGTCCTGAGGCCAACAGAGCCTCACATGCATGGCCCCAGCCACCCTCTCCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS-3UTR CCA 90 bp | CAGAATCAAAGCAAAGGTGGCCCAGTGTCAGGTGGGAGAGGGTGGCTGGGGCCAACTTGGACCACACTGTaGCCTGGGAGCTCGCTGCCC | + |
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Preference number: 4 (lower is better) Translates to: QNQSKGGPVSGGRGWLGPTWTTL*PGSSLP Trigger: GGGCAGCGAGCTCCCAGGCCACAGTGTGGTCCAAGT...TGGCCCCAGCCACCCTCTCCCACCTGACACTGGGCCACCTTTGCTTTGATTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS-3UTR TCA 90 bp | GAATCAAAGCAAAGGTGGCCCAGTGTCAGGTGGGAGAGGGTGGCTGGGGCCATGGGAGCTGATGGGCTCTaGCTGAGCATACAGGATCCG | + |
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Preference number: 4 (lower is better) Translates to: ESKQRWPSVRWERVAGAMGADGL*LSIQDP Trigger: CGGATCCTGTATGCTCAGTCAGAGCCCATCAGCTCC...CATGGCCCCAGCCACCCTCTCCCACCTGACACTGGGCCACCTTTGCTTTGATTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS-3UTR TCA 90 bp | GTGGGAGAGGGTGGCTGGGGCCATGCATGTGAGGCTCTGTTGGCCTCAGGACAGACAGGAGTTTGGAGCTaGTGGGCTCTGACTGAGCAT | + |
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Preference number: 4 (lower is better) Translates to: VGEGGWGHACEALLASGQTGVWS*WALTEH Trigger: ATGCTCAGTCAGAGCCCATCAGCTCCAAACTCCTGT...CTGTCCTGAGGCCAACAGAGCCTCACATGCATGGCCCCAGCCACCCTCTCCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS-3UTR GCA 90 bp | GTGGGAGAGGGTGGCTGGGGCCATGCATGTGAGGCTCTGTTGGCCTCAGGACAGTTCCTACAGCTCTCCTaGAGGTCTCGGAAGATGTCG | + |
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Preference number: 4 (lower is better) Translates to: VGEGGWGHACEALLASGQFLQLS*RSRKMS Trigger: CGACATCTTCCGAGACCTGCAGGAGAGCTGTAGGAA...CTGTCCTGAGGCCAACAGAGCCTCACATGCATGGCCCCAGCCACCCTCTCCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS-3UTR GCA 90 bp | TGCAGAATCAAAGCAAAGGTGGCCCAGTGTCAGGTGGGAGAGGGTGGCTGGGGCCCTCTGGGCCCAGGTTaGTCTTCCTGGGAGTACTTG | + |
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Preference number: 4 (lower is better) Translates to: CRIKAKVAQCQVGEGGWGPLGPG*SSWEYL Trigger: CAAGTACTCCCAGGAAGAGCAACCTGGGCCCAGAGG...GCCCCAGCCACCCTCTCCCACCTGACACTGGGCCACCTTTGCTTTGATTCTGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS-3UTR CCA 90 bp | CAGAATCAAAGCAAAGGTGGCCCAGTGTCAGGTGGGAGAGGGTGGCTGGGGCCACAGGGCGCTTGGGTTTaGCTCTGTCTTTTGGCGGCT | + |
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Preference number: 4 (lower is better) Translates to: QNQSKGGPVSGGRGWLGPQGAWV*LCLLAA Trigger: AGCCGCCAAAAGACAGAGCCAAACCCAAGCGCCCTG...TGGCCCCAGCCACCCTCTCCCACCTGACACTGGGCCACCTTTGCTTTGATTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS-3UTR CCA 90 bp | TGGGAGAGGGTGGCTGGGGCCATGCATGTGAGGCTCTGTTGGCCTCAGGACAGACTTGCCAGCGAGCCCTaGGAAGACACAGAAGAGGAT | + |
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Preference number: 4 (lower is better) Translates to: WERVAGAMHVRLCWPQDRLASEP*EDTEED Trigger: ATCCTCTTCTGTGTCTTCCCAGGGCTCGCTGGCAAG...TCTGTCCTGAGGCCAACAGAGCCTCACATGCATGGCCCCAGCCACCCTCTCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS-3UTR GCA 90 bp | GAATCAAAGCAAAGGTGGCCCAGTGTCAGGTGGGAGAGGGTGGCTGGGGCCATGTCATTCGCAGCAGATTaGCCAGTGTGGGCTCCTTCG | + |
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Preference number: 4 (lower is better) Translates to: ESKQRWPSVRWERVAGAMSFAAD*PVWAPS Trigger: CGAAGGAGCCCACACTGGGCAATCTGCTGCGAATGA...CATGGCCCCAGCCACCCTCTCCCACCTGACACTGGGCCACCTTTGCTTTGATTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS-3UTR CCA 90 bp | TGGGAGAGGGTGGCTGGGGCCATGCATGTGAGGCTCTGTTGGCCTCAGGACAGACACATGTCCAAAAAGTaGGGGAGCAGAGTCTGGTCC | + |
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Preference number: 4 (lower is better) Translates to: WERVAGAMHVRLCWPQDRHMSKK*GSRVWS Trigger: GGACCAGACTCTGCTCCCCCACTTTTTGGACATGTG...TCTGTCCTGAGGCCAACAGAGCCTCACATGCATGGCCCCAGCCACCCTCTCCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS-3UTR CCA 90 bp | GAATCAAAGCAAAGGTGGCCCAGTGTCAGGTGGGAGAGGGTGGCTGGGGCCATGCCAGGTTGCTCTTCCTaGGAGTACTTGAGAGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: ESKQRWPSVRWERVAGAMPGCSS*EYLRAW Trigger: CCAGGCTCTCAAGTACTCCCAGGAAGAGCAACCTGG...CATGGCCCCAGCCACCCTCTCCCACCTGACACTGGGCCACCTTTGCTTTGATTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS-3UTR CCA 90 bp | GTGGGAGAGGGTGGCTGGGGCCATGCATGTGAGGCTCTGTTGGCCTCAGGACAGGTGACAACTGTGGTTTaGGTCCCAACACACATCATG | + |
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Preference number: 4 (lower is better) Translates to: VGEGGWGHACEALLASGQVTTVV*VPTHIM Trigger: CATGATGTGTGTTGGGACCCAAACCACAGTTGTCAC...CTGTCCTGAGGCCAACAGAGCCTCACATGCATGGCCCCAGCCACCCTCTCCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS-3UTR TCA 90 bp | TGGGAGAGGGTGGCTGGGGCCATGCATGTGAGGCTCTGTTGGCCTCAGGACAGAGAAGATGTCGATGTCTaGGAAAACGTCCATTACCAC | + |
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Preference number: 4 (lower is better) Translates to: WERVAGAMHVRLCWPQDREDVDV*ENVHYH Trigger: GTGGTAATGGACGTTTTCTCAGACATCGACATCTTC...TCTGTCCTGAGGCCAACAGAGCCTCACATGCATGGCCCCAGCCACCCTCTCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS-3UTR TCA 90 bp | TGGGAGAGGGTGGCTGGGGCCATGCATGTGAGGCTCTGTTGGCCTCAGGACAGAAGTGTGAACTTCTCATaGACCTTCCCGACAACCTTT | + |
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Preference number: 4 (lower is better) Translates to: WERVAGAMHVRLCWPQDRSVNFS*TFPTTF Trigger: AAAGGTTGTCGGGAAGGTTCATGAGAAGTTCACACT...TCTGTCCTGAGGCCAACAGAGCCTCACATGCATGGCCCCAGCCACCCTCTCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS-3UTR TCA 90 bp | GCAGAATCAAAGCAAAGGTGGCCCAGTGTCAGGTGGGAGAGGGTGGCTGGGGCCGGTCAAACTTGCTATTaGTCTGGAAGTTGGACAGGA | + |
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Preference number: 4 (lower is better) Translates to: AESKQRWPSVRWERVAGAGQTCY*SGSWTG Trigger: TCCTGTCCAACTTCCAGATCAATAGCAAGTTTGACC...GGCCCCAGCCACCCTCTCCCACCTGACACTGGGCCACCTTTGCTTTGATTCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS-3UTR GCA 90 bp | GCAGAATCAAAGCAAAGGTGGCCCAGTGTCAGGTGGGAGAGGGTGGCTGGGGCCGAACTCTCAGATCCATaGACATGTCCAAAAAGTGGG | + |
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Preference number: 4 (lower is better) Translates to: AESKQRWPSVRWERVAGAELSDP*TCPKSG Trigger: CCCACTTTTTGGACATGTGCATGGATCTGAGAGTTC...GGCCCCAGCCACCCTCTCCCACCTGACACTGGGCCACCTTTGCTTTGATTCTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS-3UTR TCA 90 bp | CAGAATCAAAGCAAAGGTGGCCCAGTGTCAGGTGGGAGAGGGTGGCTGGGGCCAGACAACCTTTGTTCCTaGCCTTGCATAGTAGATATT | + |
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Preference number: 4 (lower is better) Translates to: QNQSKGGPVSGGRGWLGPDNLCS*PCIVDI Trigger: AATATCTACTATGCAAGGTCAGGAACAAAGGTTGTC...TGGCCCCAGCCACCCTCTCCCACCTGACACTGGGCCACCTTTGCTTTGATTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS-3UTR GCA 90 bp | CAGAATCAAAGCAAAGGTGGCCCAGTGTCAGGTGGGAGAGGGTGGCTGGGGCCAGAATTACCAAGTTACTaGTGTTTAATTTGCCGTCGG | + |
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Preference number: 4 (lower is better) Translates to: QNQSKGGPVSGGRGWLGPELPSY*CLICRR Trigger: CCGACGGCAAATTAAACAGCAGTAACTTGGTAATTC...TGGCCCCAGCCACCCTCTCCCACCTGACACTGGGCCACCTTTGCTTTGATTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS-3UTR GCA 90 bp | CTTAGAGACAAAGGCAGGGTTGCCAGAAAGAAGAACAAAATCCAGGCAAACAAAGGAGCTCACCGAGCTTaGCAGCGAGCCCTGGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: LRDKGRVARKKNKIQANKGAHRA*QRALGR Trigger: TCTTCCCAGGGCTCGCTGGCAAGCTCGGTGAGCTCC...TTTGTTTGCCTGGATTTTGTTCTTCTTTCTGGCAACCCTGCCTTTGTCTCTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS-3UTR CCA 90 bp | AAAATATCAAACAATGCTGCAGAATCAAAGCAAAGGTGGCCCAGTGTCAGGTGGTTTGGCTCTGTCTTTTaGCGGCTCCTCTGGGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: KISNNAAESKQRWPSVRWFGSVF*RLLWAQ Trigger: CTGGGCCCAGAGGAGCCGCCAAAAGACAGAGCCAAA...CCACCTGACACTGGGCCACCTTTGCTTTGATTCTGCAGCATTGTTTGATATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS-3UTR GCA 90 bp | AAAATATCAAACAATGCTGCAGAATCAAAGCAAAGGTGGCCCAGTGTCAGGTGGCAGGTACTTGGGGTATaGGGGAGTGTGGAGATCAGC | + |
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Preference number: 4 (lower is better) Translates to: KISNNAAESKQRWPSVRWQVLGV*GSVEIS Trigger: GCTGATCTCCACACTCCCGCATACCCCAAGTACCTG...CCACCTGACACTGGGCCACCTTTGCTTTGATTCTGCAGCATTGTTTGATATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS-3UTR CCA 90 bp | AAAATATCAAACAATGCTGCAGAATCAAAGCAAAGGTGGCCCAGTGTCAGGTGGTGGGGGAGCAGAGTCTaGTCCAGGAGGATGTACACA | + |
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Preference number: 4 (lower is better) Translates to: KISNNAAESKQRWPSVRWWGSRV*SRRMYT Trigger: TGTGTACATCCTCCTGGACCAGACTCTGCTCCCCCA...CCACCTGACACTGGGCCACCTTTGCTTTGATTCTGCAGCATTGTTTGATATTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS-3UTR TCA 90 bp | CTTAGAGACAAAGGCAGGGTTGCCAGAAAGAAGAACAAAATCCAGGCAAACAAACTGATGGGCTCTGACTaGGCATACAGGATCCGGAAC | + |
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Preference number: 4 (lower is better) Translates to: LRDKGRVARKKNKIQANKLMGSD*AYRIRN Trigger: GTTCCGGATCCTGTATGCTCAGTCAGAGCCCATCAG...TTTGTTTGCCTGGATTTTGTTCTTCTTTCTGGCAACCCTGCCTTTGTCTCTAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS-3UTR GCA 90 bp | AAAATATCAAACAATGCTGCAGAATCAAAGCAAAGGTGGCCCAGTGTCAGGTGGCTCACTCAGGCTTACTaGAGCCATCTCTTCTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: KISNNAAESKQRWPSVRWLTQAY*SHLFSG Trigger: CCCAGAGAAGAGATGGCTGCAGTAAGCCTGAGTGAG...CCACCTGACACTGGGCCACCTTTGCTTTGATTCTGCAGCATTGTTTGATATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS-3UTR CCA 90 bp | CTTAGAGACAAAGGCAGGGTTGCCAGAAAGAAGAACAAAATCCAGGCAAACAAAGAGTACTTGAGAGCCTaGCCAGCCTCATTCGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: LRDKGRVARKKNKIQANKEYLRA*PASFAA Trigger: TGCTGCGAATGAGGCTGGCCAGGCTCTCAAGTACTC...TTTGTTTGCCTGGATTTTGTTCTTCTTTCTGGCAACCCTGCCTTTGTCTCTAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS-3UTR TCA 90 bp | CTTAGAGACAAAGGCAGGGTTGCCAGAAAGAAGAACAAAATCCAGGCAAACAAATTTTCCTGCTCAGGATaGACTCTCAGATCCATGCAC | + |
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Preference number: 4 (lower is better) Translates to: LRDKGRVARKKNKIQANKFSCSG*TLRSMH Trigger: GTGCATGGATCTGAGAGTTCATCCTGAGCAGGAAAA...TTTGTTTGCCTGGATTTTGTTCTTCTTTCTGGCAACCCTGCCTTTGTCTCTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS-3UTR TCA 90 bp | TATAGTATATTTATTTATGATGTACCCTTAGAGACAAAGGCAGGGTTGCCAGAACTTCCTGGGAGTACTTaGGAGCCTGGCCAGCCTCAT | + |
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Preference number: 4 (lower is better) Translates to: YSIFIYDVPLETKAGLPELPGST*EPGQPH Trigger: ATGAGGCTGGCCAGGCTCTCAAGTACTCCCAGGAAG...TTCTGGCAACCCTGCCTTTGTCTCTAAGGGTACATCATAAATAAATATACTATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS-3UTR CCA 90 bp | TATAGTATATTTATTTATGATGTACCCTTAGAGACAAAGGCAGGGTTGCCAGAATCTCTGGGCTCTGTTTaGGTAGCAGCATCAGCCACC | + |
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Preference number: 4 (lower is better) Translates to: YSIFIYDVPLETKAGLPESLGSV*VAASAT Trigger: GGTGGCTGATGCTGCTACCCAAACAGAGCCCAGAGA...TTCTGGCAACCCTGCCTTTGTCTCTAAGGGTACATCATAAATAAATATACTATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS-3UTR CCA 90 bp | TATAGTATATTTATTTATGATGTACCCTTAGAGACAAAGGCAGGGTTGCCAGAATCGACACTGACATCTTaGATGCCGGTGACCCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: YSIFIYDVPLETKAGLPESTLTS*MPVTLL Trigger: AAGAAGGGTCACCGGCATCCAAGATGTCAGTGTCGA...TTCTGGCAACCCTGCCTTTGTCTCTAAGGGTACATCATAAATAAATATACTATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS-3UTR TCA 90 bp | TATAGTATATTTATTTATGATGTACCCTTAGAGACAAAGGCAGGGTTGCCAGAATTCCGTCAATCAGTGTaGACTTCTCATGAACCTTCC | + |
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Preference number: 4 (lower is better) Translates to: YSIFIYDVPLETKAGLPEFRQSV*TSHEPS Trigger: GGAAGGTTCATGAGAAGTTCACACTGATTGACGGAA...TTCTGGCAACCCTGCCTTTGTCTCTAAGGGTACATCATAAATAAATATACTATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS GCA 90 bp | CGCCGTAAGAAGGCGGCCCAGGCGTCGGGACCACCGGCCAGCAGCTaGTCGAGAGCCAGACGCCGCGCCTCGCTGAACAGCTCCGTGGGG | + |
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Preference number: 5 (lower is better) Translates to: RRKKAAQASGPPASS*SRARRRASLNSSVG Trigger: CCCCACGGAGCTGTTCAGCGAGGCGCGGCGTCTGGCTCTCGAGCAGCTGCTGGCCGGTGGTCCCGACGCCTGGGCCGCCTTCTTACGGCG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS TCA 90 bp | GACCACCGGCCAGCAGCTGCTCGAGAGCCAGACGCCGCGCCTCGCTaGACAGCTCCGTGGGGTTGGGCGGTCCGCACGGAGACAGGCAGG | + |
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Preference number: 5 (lower is better) Translates to: DHRPAAAREPDAAPR*TAPWGWAVRTETGR Trigger: CCTGCCTGTCTCCGTGCGGACCGCCCAACCCCACGGAGCTGTTCAGCGAGGCGCGGCGTCTGGCTCTCGAGCAGCTGCTGGCCGGTGGTC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS CCA 90 bp | CTCCGGCGCCCGCGCCGCGGGGCTGGAAATGAGCCTCGACACGCGTaGCACCGCGGTAGGCACCCTGGTAGAAGGAAGGCCAGCCGAGCT | + |
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Preference number: 5 (lower is better) Translates to: LRRPRRGAGNEPRHA*HRGRHPGRRKASRA Trigger: AGCTCGGCTGGCCTTCCTTCTACCAGGGTGCCTACCGCGGTGCCACGCGTGTCGAGGCTCATTTCCAGCCCCGCGGCGCGGGCGCCGGAG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS GCA 90 bp | CAATCACCTCTCGGGCGGAGCGCAACTGCTGGCGCAGCGCATCCTTaGAGCCATACGGGCCTCCGGCGCCCGCGCCGCGGGGCTGGAAAT | + |
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Preference number: 5 (lower is better) Translates to: QSPLGRSATAGAAHP*SHTGLRRPRRGAGN Trigger: ATTTCCAGCCCCGCGGCGCGGGCGCCGGAGGCCCGTATGGCTGCAAGGATGCGCTGCGCCAGCAGTTGCGCTCCGCCCGAGAGGTGATTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS CCA 90 bp | ACGTCCATTACCACAGCAATCACCTCTCGGGCGGAGCGCAACTGCTaGCGCAGCGCATCCTTGCAGCCATACGGGCCTCCGGCGCCCGCG | + |
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Preference number: 5 (lower is better) Translates to: TSITTAITSRAERNC*RSASLQPYGPPAPA Trigger: CGCGGGCGCCGGAGGCCCGTATGGCTGCAAGGATGCGCTGCGCCAGCAGTTGCGCTCCGCCCGAGAGGTGATTGCTGTGGTAATGGACGT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS GCA 90 bp | GCTCCAACGCCGGCGGTTCCAGGTCCGACTGCTCCGGAAAGTAGGTaGCCGACGAGCATTCGTGAGAGGAGCCGAACGAGTCCTCCGCTA | + |
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Preference number: 5 (lower is better) Translates to: APTPAVPGPTAPESR*PTSIRERSRTSPPL Trigger: TAGCGGAGGACTCGTTCGGCTCCTCTCACGAATGCTCGTCGGGCACCTACTTTCCGGAGCAGTCGGACCTGGAACCGCCGGCGTTGGAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS GCA 90 bp | AAAACGTCCATTACCACAGCAATCACCTCTCGGGCGGAGCGCAACTaGTGGCGCAGCGCATCCTTGCAGCCATACGGGCCTCCGGCGCCC | + |
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Preference number: 5 (lower is better) Translates to: KTSITTAITSRAERN*WRSASLQPYGPPAP Trigger: GGGCGCCGGAGGCCCGTATGGCTGCAAGGATGCGCTGCGCCAGCAGTTGCGCTCCGCCCGAGAGGTGATTGCTGTGGTAATGGACGTTTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
||
| CDS-3UTR CAA 90 bp | GCAGAATCAAAGCAAAGGTGGCCCAGTGTCAGGTGGGAGAGGGTGGCTGGGGCCCCCAGACCCAGGTACTaGGGGTATGCGGGAGTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: AESKQRWPSVRWERVAGAPRPRY*GYAGVW Trigger: CCACACTCCCGCATACCCCAAGTACCTGGGTCTGGG...GGCCCCAGCCACCCTCTCCCACCTGACACTGGGCCACCTTTGCTTTGATTCTGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS TCA 90 bp | CCCGGGGCTGTAGCTGAGGTAGTGCTCTGTGAAGAGCGTTCTCCGTaGGAGCACGGTGAGCATCTGGGTGAGCCGGGACCTGATGCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: PGAVAEVVLCEERSP*EHGEHLGEPGPDAS Trigger: ACTGGCATCAGGTCCCGGCTCACCCAGATGCTCACCGTGCTCTCACGGAGAACGCTCTTCACAGAGCACTACCTCAGCTACAGCCCCGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS CCA 90 bp | GCTCCTCTGGGCCCAGGTTGCTCTTCCTGGGAGTACTTGAGAGCCTaGCCAGCCTCATTCGCAGCAGATTGCCCAGTGTGGGCTCCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: APLGPGCSSWEYLRA*PASFAADCPVWAPS Trigger: CGAAGGAGCCCACACTGGGCAATCTGCTGCGAATGAGGCTGGCCAGGCTCTCAAGTACTCCCAGGAAGAGCAACCTGGGCCCAGAGGAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS-3UTR CAA 90 bp | GCAGAATCAAAGCAAAGGTGGCCCAGTGTCAGGTGGGAGAGGGTGGCTGGGGCCTCAGGGCGCTTGGGTTaGGCTCTGTCTTTTGGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: AESKQRWPSVRWERVAGASGRLG*ALSFGG Trigger: GCCGCCAAAAGACAGAGCCAAACCCAAGCGCCCTGA...GGCCCCAGCCACCCTCTCCCACCTGACACTGGGCCACCTTTGCTTTGATTCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS TCA 90 bp | TTTTGGCGGCTCCTCTGGGCCCAGGTTGCTCTTCCTGGGAGTACTTaGGAGCCTGGCCAGCCTCATTCGCAGCAGATTGCCCAGTGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: FWRLLWAQVALPGST*EPGQPHSQQIAQCG Trigger: CCCACACTGGGCAATCTGCTGCGAATGAGGCTGGCCAGGCTCTCAAGTACTCCCAGGAAGAGCAACCTGGGCCCAGAGGAGCCGCCAAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
||
| CDS CCA 90 bp | TTGGGGTATGCGGGAGTGTGGAGATCAGCAGCCGTCAGGGAGACATaGGAGCTCACCGAGCTTGCCAGCGAGCCCTGGGAAGACACAGAA | + |
|
Preference number: 5 (lower is better) Translates to: LGYAGVWRSAAVRET*ELTELASEPWEDTE Trigger: TTCTGTGTCTTCCCAGGGCTCGCTGGCAAGCTCGGTGAGCTCCCATGTCTCCCTGACGGCTGCTGATCTCCACACTCCCGCATACCCCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS CCA 90 bp | CCCTTAGGCACAGATCCAGATGCGGGGTGCCCAGACCCAGGTACTTaGGGTATGCGGGAGTGTGGAGATCAGCAGCCGTCAGGGAGACAT | + |
|
Preference number: 5 (lower is better) Translates to: PLGTDPDAGCPDPGT*GMRECGDQQPSGRH Trigger: ATGTCTCCCTGACGGCTGCTGATCTCCACACTCCCGCATACCCCAAGTACCTGGGTCTGGGCACCCCGCATCTGGATCTGTGCCTAAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
||
| CDS GCA 90 bp | TCCTGGGAGTACTTGAGAGCCTGGCCAGCCTCATTCGCAGCAGATTaGCCAGTGTGGGCTCCTTCGACTGTGGCTTTCGGTCAGCCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: SWEYLRAWPASFAAD*PVWAPSTVAFGQPD Trigger: ATCTGGCTGACCGAAAGCCACAGTCGAAGGAGCCCACACTGGGCAATCTGCTGCGAATGAGGCTGGCCAGGCTCTCAAGTACTCCCAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
||
| CDS-3UTR CAA 90 bp | GTGGGAGAGGGTGGCTGGGGCCATGCATGTGAGGCTCTGTTGGCCTCAGGACAGCCTTCCCGACAACCTTaGTTCCTGACCTTGCATAGT | + |
|
Preference number: 5 (lower is better) Translates to: VGEGGWGHACEALLASGQPSRQP*FLTLHS Trigger: ACTATGCAAGGTCAGGAACAAAGGTTGTCGGGAAGG...CTGTCCTGAGGCCAACAGAGCCTCACATGCATGGCCCCAGCCACCCTCTCCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
||
| CDS-3UTR CAA 90 bp | GCAGAATCAAAGCAAAGGTGGCCCAGTGTCAGGTGGGAGAGGGTGGCTGGGGCCAAGTTGGACAGGAGTTaGGAGCTGATGGGCTCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: AESKQRWPSVRWERVAGAKLDRS*ELMGSD Trigger: GTCAGAGCCCATCAGCTCCAAACTCCTGTCCAACTT...GGCCCCAGCCACCCTCTCCCACCTGACACTGGGCCACCTTTGCTTTGATTCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS-3UTR CAA 90 bp | CAGAATCAAAGCAAAGGTGGCCCAGTGTCAGGTGGGAGAGGGTGGCTGGGGCCACTCGACACTGACATCTaGGATGCCGGTGACCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: QNQSKGGPVSGGRGWLGPLDTDI*DAGDPS Trigger: AGAAGGGTCACCGGCATCCAAGATGTCAGTGTCGAG...TGGCCCCAGCCACCCTCTCCCACCTGACACTGGGCCACCTTTGCTTTGATTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
||
| CDS CCA 90 bp | TCAGCTTCAGTCTGTGTGGTAGTGGACTTGGACCACACTGTGGCCTaGGAGCTCGCTGCCCTGGTGACAACTGTGGTTTGGGTCCCAACA | + |
|
Preference number: 5 (lower is better) Translates to: SASVCVVVDLDHTVA*ELAALVTTVVWVPT Trigger: TGTTGGGACCCAAACCACAGTTGTCACCAGGGCAGCGAGCTCCCAGGCCACAGTGTGGTCCAAGTCCACTACCACACAGACTGAAGCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
||
| CDS TCA 90 bp | CCGCTTCCTACAGCTCTCCTGCAGGTCTCGGAAGATGTCGATGTCTaGGAAAACGTCCATTACCACAGCAATCACCTCTCGGGCGGAGCG | + |
|
Preference number: 5 (lower is better) Translates to: PLPTALLQVSEDVDV*ENVHYHSNHLSGGA Trigger: CGCTCCGCCCGAGAGGTGATTGCTGTGGTAATGGACGTTTTCTCAGACATCGACATCTTCCGAGACCTGCAGGAGAGCTGTAGGAAGCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
||
| CDS CCA 90 bp | AGCACGGTGAGCATCTGGGTGAGCCGGGACCTGATGCCAGTGAAGTaGACCTGCCGCTCCTTACTTAAGTTTCTGAACGAGTCCCTTAGG | + |
|
Preference number: 5 (lower is better) Translates to: STVSIWVSRDLMPVK*TCRSLLKFLNESLR Trigger: CCTAAGGGACTCGTTCAGAAACTTAAGTAAGGAGCGGCAGGTCCACTTCACTGGCATCAGGTCCCGGCTCACCCAGATGCTCACCGTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
||
| CDS GCA 90 bp | TCCTTACTTAAGTTTCTGAACGAGTCCCTTAGGCACAGATCCAGATaGGGGGTGCCCAGACCCAGGTACTTGGGGTATGCGGGAGTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SLLKFLNESLRHRSR*GVPRPRYLGYAGVW Trigger: CCACACTCCCGCATACCCCAAGTACCTGGGTCTGGGCACCCCGCATCTGGATCTGTGCCTAAGGGACTCGTTCAGAAACTTAAGTAAGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS GCA 90 bp | GTGAGCATCTGGGTGAGCCGGGACCTGATGCCAGTGAAGTGGACCTaGCGCTCCTTACTTAAGTTTCTGAACGAGTCCCTTAGGCACAGA | + |
|
Preference number: 5 (lower is better) Translates to: VSIWVSRDLMPVKWT*RSLLKFLNESLRHR Trigger: TCTGTGCCTAAGGGACTCGTTCAGAAACTTAAGTAAGGAGCGGCAGGTCCACTTCACTGGCATCAGGTCCCGGCTCACCCAGATGCTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS CCA 90 bp | TGGAAGACCTCGACACTGACATCTTGGATGCCGGTGACCCTTCTTTaGACTGGGCACCCTGAGGAAGGAAGCTCTCGTCAGCTTCAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: WKTSTLTSWMPVTLL*TGHPEEGSSRQLQS Trigger: AGACTGAAGCTGACGAGAGCTTCCTTCCTCAGGGTGCCCAGTCCAAAGAAGGGTCACCGGCATCCAAGATGTCAGTGTCGAGGTCTTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS CCA 90 bp | CAGAAGAGGATGACCTCACACTGGAAGACCTCGACACTGACATCTTaGATGCCGGTGACCCTTCTTTGGACTGGGCACCCTGAGGAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: QKRMTSHWKTSTLTS*MPVTLLWTGHPEEG Trigger: TCCTTCCTCAGGGTGCCCAGTCCAAAGAAGGGTCACCGGCATCCAAGATGTCAGTGTCGAGGTCTTCCAGTGTGAGGTCATCCTCTTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS-3UTR CAA 90 bp | GTGGGAGAGGGTGGCTGGGGCCATGCATGTGAGGCTCTGTTGGCCTCAGGACAGCCTTTGTTCCTGACCTaGCATAGTAGATATTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: VGEGGWGHACEALLASGQPLFLT*HSRYFL Trigger: CAGGAAATATCTACTATGCAAGGTCAGGAACAAAGG...CTGTCCTGAGGCCAACAGAGCCTCACATGCATGGCCCCAGCCACCCTCTCCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS-3UTR CAA 90 bp | TGGGAGAGGGTGGCTGGGGCCATGCATGTGAGGCTCTGTTGGCCTCAGGACAGAGCCAGATGGTCAAACTaGCTATTGATCTGGAAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: WERVAGAMHVRLCWPQDRARWSN*LLIWKL Trigger: CAACTTCCAGATCAATAGCAAGTTTGACCATCTGGC...TCTGTCCTGAGGCCAACAGAGCCTCACATGCATGGCCCCAGCCACCCTCTCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
||
| CDS-3UTR CAA 90 bp | GCAGAATCAAAGCAAAGGTGGCCCAGTGTCAGGTGGGAGAGGGTGGCTGGGGCCTTACTGCTGTTTAATTaGCCGTCGGTCCAGGTAAAA | + |
|
Preference number: 5 (lower is better) Translates to: AESKQRWPSVRWERVAGALLLFN*PSVQVK Trigger: TTTTACCTGGACCGACGGCAAATTAAACAGCAGTAA...GGCCCCAGCCACCCTCTCCCACCTGACACTGGGCCACCTTTGCTTTGATTCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
||
| CDS CCA 90 bp | TTGCCCAGTGTGGGCTCCTTCGACTGTGGCTTTCGGTCAGCCAGATaGTCAAACTTGCTATTGATCTGGAAGTTGGACAGGAGTTTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LPSVGSFDCGFRSAR*SNLLLIWKLDRSLE Trigger: CTCCAAACTCCTGTCCAACTTCCAGATCAATAGCAAGTTTGACCATCTGGCTGACCGAAAGCCACAGTCGAAGGAGCCCACACTGGGCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS-3UTR CAA 90 bp | TATAGTATATTTATTTATGATGTACCCTTAGAGACAAAGGCAGGGTTGCCAGAACGCACCTCGTCGGCGTaGAGGAAGCGGCCCAGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: YSIFIYDVPLETKAGLPERTSSA*RKRPSR Trigger: GCGGCTGGGCCGCTTCCTCAACGCCGACGAGGTGCG...TTCTGGCAACCCTGCCTTTGTCTCTAAGGGTACATCATAAATAAATATACTATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
||
| CDS TCA 90 bp | TTGATCTGGAAGTTGGACAGGAGTTTGGAGCTGATGGGCTCTGACTaGGCATACAGGATCCGGAACTCCAGATCAAAGTGTTCAACCACT | + |
|
Preference number: 5 (lower is better) Translates to: LIWKLDRSLELMGSD*AYRIRNSRSKCSTT Trigger: AGTGGTTGAACACTTTGATCTGGAGTTCCGGATCCTGTATGCTCAGTCAGAGCCCATCAGCTCCAAACTCCTGTCCAACTTCCAGATCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS TCA 90 bp | GCTATTGATCTGGAAGTTGGACAGGAGTTTGGAGCTGATGGGCTCTaGCTGAGCATACAGGATCCGGAACTCCAGATCAAAGTGTTCAAC | + |
|
Preference number: 5 (lower is better) Translates to: AIDLEVGQEFGADGL*LSIQDPELQIKVFN Trigger: GTTGAACACTTTGATCTGGAGTTCCGGATCCTGTATGCTCAGTCAGAGCCCATCAGCTCCAAACTCCTGTCCAACTTCCAGATCAATAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS-3UTR CAA 90 bp | CTTAGAGACAAAGGCAGGGTTGCCAGAAAGAAGAACAAAATCCAGGCAAACAAATCTTCCTGGGAGTACTaGAGAGCCTGGCCAGCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: LRDKGRVARKKNKIQANKSSWEY*RAWPAS Trigger: TGAGGCTGGCCAGGCTCTCAAGTACTCCCAGGAAGA...TTTGTTTGCCTGGATTTTGTTCTTCTTTCTGGCAACCCTGCCTTTGTCTCTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS-3UTR CAA 90 bp | AAAATATCAAACAATGCTGCAGAATCAAAGCAAAGGTGGCCCAGTGTCAGGTGGTCAGAGTCAGGGCGCTaGGGTTTGGCTCTGTCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: KISNNAAESKQRWPSVRWSESGR*GLALSF Trigger: AAAAGACAGAGCCAAACCCAAGCGCCCTGACTCTGA...CCACCTGACACTGGGCCACCTTTGCTTTGATTCTGCAGCATTGTTTGATATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS-3UTR CAA 90 bp | AAAATATCAAACAATGCTGCAGAATCAAAGCAAAGGTGGCCCAGTGTCAGGTGGCTCACAGAAACCAGGTaGGTAGAGGCTCTGGTAAAG | + |
|
Preference number: 5 (lower is better) Translates to: KISNNAAESKQRWPSVRWLTETR*VEALVK Trigger: CTTTACCAGAGCCTCTACCAACCTGGTTTCTGTGAG...CCACCTGACACTGGGCCACCTTTGCTTTGATTCTGCAGCATTGTTTGATATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS-3UTR CAA 90 bp | CTTAGAGACAAAGGCAGGGTTGCCAGAAAGAAGAACAAAATCCAGGCAAACAAAAAAGTGTTCAACCACTaGGCCAGACAGAATTACCAA | + |
|
Preference number: 5 (lower is better) Translates to: LRDKGRVARKKNKIQANKKVFNH*ARQNYQ Trigger: TTGGTAATTCTGTCTGGCCAAGTGGTTGAACACTTT...TTTGTTTGCCTGGATTTTGTTCTTCTTTCTGGCAACCCTGCCTTTGTCTCTAAG 42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS TCA 90 bp | AATCAGTGTGAACTTCTCATGAACCTTCCCGACAACCTTTGTTCCTaGCCTTGCATAGTAGATATTTCCTGTAATTGTCCGAACTGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: NQCELLMNLPDNLCS*PCIVDISCNCPNCH Trigger: ATGACAGTTCGGACAATTACAGGAAATATCTACTATGCAAGGTCAGGAACAAAGGTTGTCGGGAAGGTTCATGAGAAGTTCACACTGATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS-3UTR CAA 90 bp | TATAGTATATTTATTTATGATGTACCCTTAGAGACAAAGGCAGGGTTGCCAGAACTATTGATCTGGAAGTaGGACAGGAGTTTGGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: YSIFIYDVPLETKAGLPELLIWK*DRSLEL Trigger: CAGCTCCAAACTCCTGTCCAACTTCCAGATCAATAG...TTCTGGCAACCCTGCCTTTGTCTCTAAGGGTACATCATAAATAAATATACTATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS GCA 72 bp | CTCGGGCGGAGCGCAACTGCTGGCGCAGCGCATCCTTaGAGCCATACGGGCCTCCGGCGCCCGCGCCGCGGG | + |
|
Preference number: 6 (lower is better) Translates to: LGRSATAGAAHP*SHTGLRRPRRG Trigger: CCCGCGGCGCGGGCGCCGGAGGCCCGTATGGCTGCAAGGATGCGCTGCGCCAGCAGTTGCGCTCCGCCCGAG 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS CAA 72 bp | TCTCGGGCGGAGCGCAACTGCTGGCGCAGCGCATCCTaGCAGCCATACGGGCCTCCGGCGCCCGCGCCGCGG | + |
|
Preference number: 6 (lower is better) Translates to: SRAERNCWRSAS*QPYGPPAPAPR Trigger: CCGCGGCGCGGGCGCCGGAGGCCCGTATGGCTGCAAGGATGCGCTGCGCCAGCAGTTGCGCTCCGCCCGAGA 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS CAA 90 bp | CCCGGCCGCTCGGCAGCGCCCAGAACCTCGCGCACCTCGTCGGCGTaGAGGAAGCGGCCCAGCCGCTCACGCCGTAAGAAGGCGGCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: PGRSAAPRTSRTSSA*RKRPSRSRRKKAAQ Trigger: CTGGGCCGCCTTCTTACGGCGTGAGCGGCTGGGCCGCTTCCTCAACGCCGACGAGGTGCGCGAGGTTCTGGGCGCTGCCGAGCGGCCGGG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS GCA 72 bp | AAGGCGGCCCAGGCGTCGGGACCACCGGCCAGCAGCTaGTCGAGAGCCAGACGCCGCGCCTCGCTGAACAGC | + |
|
Preference number: 6 (lower is better) Translates to: KAAQASGPPASS*SRARRRASLNS Trigger: GCTGTTCAGCGAGGCGCGGCGTCTGGCTCTCGAGCAGCTGCTGGCCGGTGGTCCCGACGCCTGGGCCGCCTT 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS CAA 90 bp | GCAATCACCTCTCGGGCGGAGCGCAACTGCTGGCGCAGCGCATCCTaGCAGCCATACGGGCCTCCGGCGCCCGCGCCGCGGGGCTGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: AITSRAERNCWRSAS*QPYGPPAPAPRGWK Trigger: TTTCCAGCCCCGCGGCGCGGGCGCCGGAGGCCCGTATGGCTGCAAGGATGCGCTGCGCCAGCAGTTGCGCTCCGCCCGAGAGGTGATTGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS TCA 72 bp | CCAGCAGCTGCTCGAGAGCCAGACGCCGCGCCTCGCTaGACAGCTCCGTGGGGTTGGGCGGTCCGCACGGAG | + |
|
Preference number: 6 (lower is better) Translates to: PAAAREPDAAPR*TAPWGWAVRTE Trigger: CTCCGTGCGGACCGCCCAACCCCACGGAGCTGTTCAGCGAGGCGCGGCGTCTGGCTCTCGAGCAGCTGCTGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
||
| CDS CCA 72 bp | CCGCGCCGCGGGGCTGGAAATGAGCCTCGACACGCGTaGCACCGCGGTAGGCACCCTGGTAGAAGGAAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: PRRGAGNEPRHA*HRGRHPGRRKA Trigger: GGCCTTCCTTCTACCAGGGTGCCTACCGCGGTGCCACGCGTGTCGAGGCTCATTTCCAGCCCCGCGGCGCGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
||
| CDS CAA 72 bp | TCGGCAGCGCCCAGAACCTCGCGCACCTCGTCGGCGTaGAGGAAGCGGCCCAGCCGCTCACGCCGTAAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: SAAPRTSRTSSA*RKRPSRSRRKK Trigger: CTTCTTACGGCGTGAGCGGCTGGGCCGCTTCCTCAACGCCGACGAGGTGCGCGAGGTTCTGGGCGCTGCCGA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
||
| CDS CCA 72 bp | ACCACAGCAATCACCTCTCGGGCGGAGCGCAACTGCTaGCGCAGCGCATCCTTGCAGCCATACGGGCCTCCG | + |
|
Preference number: 6 (lower is better) Translates to: TTAITSRAERNC*RSASLQPYGPP Trigger: CGGAGGCCCGTATGGCTGCAAGGATGCGCTGCGCCAGCAGTTGCGCTCCGCCCGAGAGGTGATTGCTGTGGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS GCA 72 bp | CCGGCGGTTCCAGGTCCGACTGCTCCGGAAAGTAGGTaGCCGACGAGCATTCGTGAGAGGAGCCGAACGAGT | + |
|
Preference number: 6 (lower is better) Translates to: PAVPGPTAPESR*PTSIRERSRTS Trigger: ACTCGTTCGGCTCCTCTCACGAATGCTCGTCGGGCACCTACTTTCCGGAGCAGTCGGACCTGGAACCGCCGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
||
| CDS GCA 72 bp | ATTACCACAGCAATCACCTCTCGGGCGGAGCGCAACTaGTGGCGCAGCGCATCCTTGCAGCCATACGGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: ITTAITSRAERN*WRSASLQPYGP Trigger: AGGCCCGTATGGCTGCAAGGATGCGCTGCGCCAGCAGTTGCGCTCCGCCCGAGAGGTGATTGCTGTGGTAAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
||
| CDS CCA 72 bp | CTCAGAGTCAGGGCGCTTGGGTTTGGCTCTGTCTTTTaGCGGCTCCTCTGGGCCCAGGTTGCTCTTCCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: LRVRALGFGSVF*RLLWAQVALPG Trigger: CCCAGGAAGAGCAACCTGGGCCCAGAGGAGCCGCCAAAAGACAGAGCCAAACCCAAGCGCCCTGACTCTGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
||
| CDS CAA 72 bp | CAGCAGCCGTCAGGGAGACATGGGAGCTCACCGAGCTaGCCAGCGAGCCCTGGGAAGACACAGAAGAGGATG | + |
|
Preference number: 6 (lower is better) Translates to: QQPSGRHGSSPS*PASPGKTQKRM Trigger: CATCCTCTTCTGTGTCTTCCCAGGGCTCGCTGGCAAGCTCGGTGAGCTCCCATGTCTCCCTGACGGCTGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
||
| CDS CAA 72 bp | CACAGATCCAGATGCGGGGTGCCCAGACCCAGGTACTaGGGGTATGCGGGAGTGTGGAGATCAGCAGCCGTC | + |
|
Preference number: 6 (lower is better) Translates to: HRSRCGVPRPRY*GYAGVWRSAAV Trigger: GACGGCTGCTGATCTCCACACTCCCGCATACCCCAAGTACCTGGGTCTGGGCACCCCGCATCTGGATCTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
||
| CDS CAA 90 bp | CTTTTGGCGGCTCCTCTGGGCCCAGGTTGCTCTTCCTGGGAGTACTaGAGAGCCTGGCCAGCCTCATTCGCAGCAGATTGCCCAGTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: LLAAPLGPGCSSWEY*RAWPASFAADCPVW Trigger: CCACACTGGGCAATCTGCTGCGAATGAGGCTGGCCAGGCTCTCAAGTACTCCCAGGAAGAGCAACCTGGGCCCAGAGGAGCCGCCAAAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
||
| CDS CAA 90 bp | TCCCTTAGGCACAGATCCAGATGCGGGGTGCCCAGACCCAGGTACTaGGGGTATGCGGGAGTGTGGAGATCAGCAGCCGTCAGGGAGACA | + |
|
Preference number: 6 (lower is better) Translates to: SLRHRSRCGVPRPRY*GYAGVWRSAAVRET Trigger: TGTCTCCCTGACGGCTGCTGATCTCCACACTCCCGCATACCCCAAGTACCTGGGTCTGGGCACCCCGCATCTGGATCTGTGCCTAAGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS TCA 72 bp | CTCCTCTGGGCCCAGGTTGCTCTTCCTGGGAGTACTTaGGAGCCTGGCCAGCCTCATTCGCAGCAGATTGCC | + |
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Preference number: 6 (lower is better) Translates to: LLWAQVALPGST*EPGQPHSQQIA Trigger: GGCAATCTGCTGCGAATGAGGCTGGCCAGGCTCTCAAGTACTCCCAGGAAGAGCAACCTGGGCCCAGAGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS CCA 72 bp | GGCCCAGGTTGCTCTTCCTGGGAGTACTTGAGAGCCTaGCCAGCCTCATTCGCAGCAGATTGCCCAGTGTGG | + |
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Preference number: 6 (lower is better) Translates to: GPGCSSWEYLRA*PASFAADCPVW Trigger: CCACACTGGGCAATCTGCTGCGAATGAGGCTGGCCAGGCTCTCAAGTACTCCCAGGAAGAGCAACCTGGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS CCA 72 bp | CTTTTGGCGGCTCCTCTGGGCCCAGGTTGCTCTTCCTaGGAGTACTTGAGAGCCTGGCCAGCCTCATTCGCA | + |
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Preference number: 6 (lower is better) Translates to: LLAAPLGPGCSS*EYLRAWPASFA Trigger: TGCGAATGAGGCTGGCCAGGCTCTCAAGTACTCCCAGGAAGAGCAACCTGGGCCCAGAGGAGCCGCCAAAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS CCA 72 bp | ACAGATCCAGATGCGGGGTGCCCAGACCCAGGTACTTaGGGTATGCGGGAGTGTGGAGATCAGCAGCCGTCA | + |
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Preference number: 6 (lower is better) Translates to: TDPDAGCPDPGT*GMRECGDQQPS Trigger: TGACGGCTGCTGATCTCCACACTCCCGCATACCCCAAGTACCTGGGTCTGGGCACCCCGCATCTGGATCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS CCA 72 bp | GTGAAGAGCGTTCTCCGTGAGAGCACGGTGAGCATCTaGGTGAGCCGGGACCTGATGCCAGTGAAGTGGACC | + |
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Preference number: 6 (lower is better) Translates to: VKSVLRESTVSI*VSRDLMPVKWT Trigger: GGTCCACTTCACTGGCATCAGGTCCCGGCTCACCCAGATGCTCACCGTGCTCTCACGGAGAACGCTCTTCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS CAA 72 bp | GCTCCTCTGGGCCCAGGTTGCTCTTCCTGGGAGTACTaGAGAGCCTGGCCAGCCTCATTCGCAGCAGATTGC | + |
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Preference number: 6 (lower is better) Translates to: APLGPGCSSWEY*RAWPASFAADC Trigger: GCAATCTGCTGCGAATGAGGCTGGCCAGGCTCTCAAGTACTCCCAGGAAGAGCAACCTGGGCCCAGAGGAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS GCA 72 bp | AGTGGACTTGGACCACACTGTGGCCTGGGAGCTCGCTaGCCTGGTGACAACTGTGGTTTGGGTCCCAACACA | + |
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Preference number: 6 (lower is better) Translates to: SGLGPHCGLGAR*PGDNCGLGPNT Trigger: TGTGTTGGGACCCAAACCACAGTTGTCACCAGGGCAGCGAGCTCCCAGGCCACAGTGTGGTCCAAGTCCACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS CCA 72 bp | GTCTGTGTGGTAGTGGACTTGGACCACACTGTGGCCTaGGAGCTCGCTGCCCTGGTGACAACTGTGGTTTGG | + |
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Preference number: 6 (lower is better) Translates to: VCVVVDLDHTVA*ELAALVTTVVW Trigger: CCAAACCACAGTTGTCACCAGGGCAGCGAGCTCCCAGGCCACAGTGTGGTCCAAGTCCACTACCACACAGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS CAA 90 bp | TTCCTGGGAGTACTTGAGAGCCTGGCCAGCCTCATTCGCAGCAGATaGCCCAGTGTGGGCTCCTTCGACTGTGGCTTTCGGTCAGCCAGA | + |
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Preference number: 6 (lower is better) Translates to: FLGVLESLASLIRSR*PSVGSFDCGFRSAR Trigger: TCTGGCTGACCGAAAGCCACAGTCGAAGGAGCCCACACTGGGCAATCTGCTGCGAATGAGGCTGGCCAGGCTCTCAAGTACTCCCAGGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS CAA 90 bp | TCTTCATCGCTGATGGTAGAAGCCTCAGAGTCAGGGCGCTTGGGTTaGGCTCTGTCTTTTGGCGGCTCCTCTGGGCCCAGGTTGCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: SSSLMVEASESGRLG*ALSFGGSSGPRLLF Trigger: GAAGAGCAACCTGGGCCCAGAGGAGCCGCCAAAAGACAGAGCCAAACCCAAGCGCCCTGACTCTGAGGCTTCTACCATCAGCGATGAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS GCA 72 bp | TACTTGAGAGCCTGGCCAGCCTCATTCGCAGCAGATTaGCCAGTGTGGGCTCCTTCGACTGTGGCTTTCGGT | + |
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Preference number: 6 (lower is better) Translates to: YLRAWPASFAAD*PVWAPSTVAFG Trigger: ACCGAAAGCCACAGTCGAAGGAGCCCACACTGGGCAATCTGCTGCGAATGAGGCTGGCCAGGCTCTCAAGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS CAA 72 bp | GGCCTGGGAGCTCGCTGCCCTGGTGACAACTGTGGTTaGGGTCCCAACACACATCATGCTGGAACTAGTCTG | + |
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Preference number: 6 (lower is better) Translates to: GLGARCPGDNCG*GPNTHHAGTSL Trigger: CAGACTAGTTCCAGCATGATGTGTGTTGGGACCCAAACCACAGTTGTCACCAGGGCAGCGAGCTCCCAGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS GCA 72 bp | AAGTTTCTGAACGAGTCCCTTAGGCACAGATCCAGATaGGGGGTGCCCAGACCCAGGTACTTGGGGTATGCG | + |
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Preference number: 6 (lower is better) Translates to: KFLNESLRHRSR*GVPRPRYLGYA Trigger: CGCATACCCCAAGTACCTGGGTCTGGGCACCCCGCATCTGGATCTGTGCCTAAGGGACTCGTTCAGAAACTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS CCA 72 bp | TCGACACTGACATCTTGGATGCCGGTGACCCTTCTTTaGACTGGGCACCCTGAGGAAGGAAGCTCTCGTCAG | + |
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Preference number: 6 (lower is better) Translates to: STLTSWMPVTLL*TGHPEEGSSRQ Trigger: CTGACGAGAGCTTCCTTCCTCAGGGTGCCCAGTCCAAAGAAGGGTCACCGGCATCCAAGATGTCAGTGTCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS CAA 72 bp | GATGACCTCACACTGGAAGACCTCGACACTGACATCTaGGATGCCGGTGACCCTTCTTTGGACTGGGCACCC | + |
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Preference number: 6 (lower is better) Translates to: DDLTLEDLDTDI*DAGDPSLDWAP Trigger: GGGTGCCCAGTCCAAAGAAGGGTCACCGGCATCCAAGATGTCAGTGTCGAGGTCTTCCAGTGTGAGGTCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS GCA 72 bp | TGGGTGAGCCGGGACCTGATGCCAGTGAAGTGGACCTaGCGCTCCTTACTTAAGTTTCTGAACGAGTCCCTT | + |
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Preference number: 6 (lower is better) Translates to: WVSRDLMPVKWT*RSLLKFLNESL Trigger: AAGGGACTCGTTCAGAAACTTAAGTAAGGAGCGGCAGGTCCACTTCACTGGCATCAGGTCCCGGCTCACCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS CCA 72 bp | ATGACCTCACACTGGAAGACCTCGACACTGACATCTTaGATGCCGGTGACCCTTCTTTGGACTGGGCACCCT | + |
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Preference number: 6 (lower is better) Translates to: MTSHWKTSTLTS*MPVTLLWTGHP Trigger: AGGGTGCCCAGTCCAAAGAAGGGTCACCGGCATCCAAGATGTCAGTGTCGAGGTCTTCCAGTGTGAGGTCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS CCA 72 bp | AGCATCTGGGTGAGCCGGGACCTGATGCCAGTGAAGTaGACCTGCCGCTCCTTACTTAAGTTTCTGAACGAG | + |
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Preference number: 6 (lower is better) Translates to: SIWVSRDLMPVK*TCRSLLKFLNE Trigger: CTCGTTCAGAAACTTAAGTAAGGAGCGGCAGGTCCACTTCACTGGCATCAGGTCCCGGCTCACCCAGATGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS CCA 72 bp | TCGCAGCAGATTGCCCAGTGTGGGCTCCTTCGACTGTaGCTTTCGGTCAGCCAGATGGTCAAACTTGCTATT | + |
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Preference number: 6 (lower is better) Translates to: SQQIAQCGLLRL*LSVSQMVKLAI Trigger: AATAGCAAGTTTGACCATCTGGCTGACCGAAAGCCACAGTCGAAGGAGCCCACACTGGGCAATCTGCTGCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS CAA 90 bp | GTGGGCTCCTTCGACTGTGGCTTTCGGTCAGCCAGATGGTCAAACTaGCTATTGATCTGGAAGTTGGACAGGAGTTTGGAGCTGATGGGC | + |
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Preference number: 6 (lower is better) Translates to: VGSFDCGFRSARWSN*LLIWKLDRSLELMG Trigger: GCCCATCAGCTCCAAACTCCTGTCCAACTTCCAGATCAATAGCAAGTTTGACCATCTGGCTGACCGAAAGCCACAGTCGAAGGAGCCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS TCA 72 bp | GTTTGGGTCCCAACACACATCATGCTGGAACTAGTCTaGGTTCCCACCTCACTCAGGCTTACTGCAGCCATC | + |
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Preference number: 6 (lower is better) Translates to: VWVPTHIMLELV*VPTSLRLTAAI Trigger: GATGGCTGCAGTAAGCCTGAGTGAGGTGGGAACTCAGACTAGTTCCAGCATGATGTGTGTTGGGACCCAAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS CAA 90 bp | TCCTTCGACTGTGGCTTTCGGTCAGCCAGATGGTCAAACTTGCTATaGATCTGGAAGTTGGACAGGAGTTTGGAGCTGATGGGCTCTGAC | + |
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Preference number: 6 (lower is better) Translates to: SFDCGFRSARWSNLL*IWKLDRSLELMGSD Trigger: GTCAGAGCCCATCAGCTCCAAACTCCTGTCCAACTTCCAGATCAATAGCAAGTTTGACCATCTGGCTGACCGAAAGCCACAGTCGAAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS TCA 72 bp | ACAGCTCTCCTGCAGGTCTCGGAAGATGTCGATGTCTaGGAAAACGTCCATTACCACAGCAATCACCTCTCG | + |
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Preference number: 6 (lower is better) Translates to: TALLQVSEDVDV*ENVHYHSNHLS Trigger: CGAGAGGTGATTGCTGTGGTAATGGACGTTTTCTCAGACATCGACATCTTCCGAGACCTGCAGGAGAGCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS TCA 72 bp | GCCACCCGGATTCCGTCAATCAGTGTGAACTTCTCATaGACCTTCCCGACAACCTTTGTTCCTGACCTTGCA | + |
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Preference number: 6 (lower is better) Translates to: ATRIPSISVNFS*TFPTTFVPDLA Trigger: TGCAAGGTCAGGAACAAAGGTTGTCGGGAAGGTTCATGAGAAGTTCACACTGATTGACGGAATCCGGGTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS GCA 72 bp | TTTGCCGTCGGTCCAGGTAAAACTGTAAGAGCCTGTTaGCACCCGGATTCCGTCAATCAGTGTGAACTTCTC | + |
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Preference number: 6 (lower is better) Translates to: FAVGPGKTVRAC*HPDSVNQCELL Trigger: GAGAAGTTCACACTGATTGACGGAATCCGGGTGGCAACAGGCTCTTACAGTTTTACCTGGACCGACGGCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS TCA 72 bp | AAGTTGGACAGGAGTTTGGAGCTGATGGGCTCTGACTaGGCATACAGGATCCGGAACTCCAGATCAAAGTGT | + |
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Preference number: 6 (lower is better) Translates to: KLDRSLELMGSD*AYRIRNSRSKC Trigger: ACACTTTGATCTGGAGTTCCGGATCCTGTATGCTCAGTCAGAGCCCATCAGCTCCAAACTCCTGTCCAACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS CAA 72 bp | TTCGACTGTGGCTTTCGGTCAGCCAGATGGTCAAACTaGCTATTGATCTGGAAGTTGGACAGGAGTTTGGAG | + |
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Preference number: 6 (lower is better) Translates to: FDCGFRSARWSN*LLIWKLDRSLE Trigger: CTCCAAACTCCTGTCCAACTTCCAGATCAATAGCAAGTTTGACCATCTGGCTGACCGAAAGCCACAGTCGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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| CDS TCA 72 bp | GAACTTCTCATGAACCTTCCCGACAACCTTTGTTCCTaGCCTTGCATAGTAGATATTTCCTGTAATTGTCCG | + |
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Preference number: 6 (lower is better) Translates to: ELLMNLPDNLCS*PCIVDISCNCP Trigger: CGGACAATTACAGGAAATATCTACTATGCAAGGTCAGGAACAAAGGTTGTCGGGAAGGTTCATGAGAAGTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029183.3 |
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