Pregenerated sensors for FAM83C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074647Ensembl transcript IDs: ENSMUST00000029143.7, ENSMUST00000239423.2
Found 173 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGTCTCCTGCAGGTGCTAAGTTCAGGAGAAAGACCCATGACCAGCTaGAGCCCGAGCTTCCAGAGACATTCAGCAAGGTGGTCTGTGTGT | + |
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Preference number: 1 (lower is better) Translates to: SLLQVLSSGERPMTS*SPSFQRHSARWSVC Trigger: ACACACAGACCACCTTGCTGAATGTCTCTGGAAGCTCGGGCTGCAGCTGGTCATGGGTCTTTCTCCTGAACTTAGCACCTGCAGGAGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| 3UTR GCA 90 bp | TTCAGCAAGGTGGTCTGTGTGTTTGTGTCTAAGTGTTCAACTACGTaGTCTGCTTATCTCCCCCAGCTCACCCCAGATCCGCTCATTGAG | + |
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Preference number: 1 (lower is better) Translates to: FSKVVCVFVSKCSTT*SAYLPQLTPDPLIE Trigger: CTCAATGAGCGGATCTGGGGTGAGCTGGGGGAGATAAGCAGAGCACGTAGTTGAACACTTAGACACAAACACACAGACCACCTTGCTGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| 3UTR CCA 90 bp | TATAACGGGAGCGCCAAGGCCAAGAGACCAAACACTACTGGGGACTaGGCGGTCAGGAACATAAATTTGTCTGTCACAGATTCAGACTCG | + |
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Preference number: 1 (lower is better) Translates to: YNGSAKAKRPNTTGD*AVRNINLSVTDSDS Trigger: CGAGTCTGAATCTGTGACAGACAAATTTATGTTCCTGACCGCCCAGTCCCCAGTAGTGTTTGGTCTCTTGGCCTTGGCGCTCCCGTTATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| 3UTR CCA 90 bp | CCAGAGGACAATGGACTGGCAGAATTCCCTAACCTGTCACTTGATTaGATCTTCCTCCAAATTAACCATCCAAGCTCTGGACTTCAGTGC | + |
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Preference number: 1 (lower is better) Translates to: PEDNGLAEFPNLSLD*IFLQINHPSSGLQC Trigger: GCACTGAAGTCCAGAGCTTGGATGGTTAATTTGGAGGAAGATCCAATCAAGTGACAGGTTAGGGAATTCTGCCAGTCCATTGTCCTCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| 3UTR CCA 90 bp | CTTTCGGCTCTAGGGAATGTTCAGGGTGAGGTTGTGAGCACAGCTTaGTGCAGAGTTAGGATGAAGAGTCATATGTGTATTTATAGTTTC | + |
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Preference number: 1 (lower is better) Translates to: LSALGNVQGEVVSTA*CRVRMKSHMCIYSF Trigger: GAAACTATAAATACACATATGACTCTTCATCCTAACTCTGCACCAAGCTGTGCTCACAACCTCACCCTGAACATTCCCTAGAGCCGAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| 3UTR TCA 90 bp | TATAAAATGGGAAGAATATCAATCGTCTGTTCTCTTTGGCCTCTGTaGCAGAAGCAAGATGTCAAAAATGAGCATCATCCTTTGGAAGGC | + |
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Preference number: 1 (lower is better) Translates to: YKMGRISIVCSLWPL*QKQDVKNEHHPLEG Trigger: GCCTTCCAAAGGATGATGCTCATTTTTGACATCTTGCTTCTGTCACAGAGGCCAAAGAGAACAGACGATTGATATTCTTCCCATTTTATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| 3UTR-3UTR CCA 90 bp | CCAGATCCGCTCATTGAGCCCCACACCACTCTCTGGCTTACTCTACCAAGAACTGCCTGGGCTGCTAGATaGCCCCCTTCTTTATGCAGC | + |
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Preference number: 2 (lower is better) Translates to: PDPLIEPHTTLWLTLPRTAWAAR*PPSLCS Trigger: GCTGCATAAAGAAGGGGGCCATCTAGCAGCCCAGGC...AGTTCTTGGTAGAGTAAGCCAGAGAGTGGTGTGGGGCTCAATGAGCGGATCTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| 3UTR-3UTR CCA 90 bp | CCAGATCCGCTCATTGAGCCCCACACCACTCTCTGGCTTACTCTACCAAGAACTAGGAAGTTTTTGGCCTaGGCTGCTAGATGGCCCCCT | + |
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Preference number: 2 (lower is better) Translates to: PDPLIEPHTTLWLTLPRTRKFLA*AARWPP Trigger: AGGGGGCCATCTAGCAGCCCAGGCCAAAAACTTCCT...AGTTCTTGGTAGAGTAAGCCAGAGAGTGGTGTGGGGCTCAATGAGCGGATCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| 3UTR CAA 90 bp | CCTTCTTTATGCAGCACCCCAGCTTCATACTCTCACACTCCAGACTaGAACCTGAGCATGTCGTCTCTGGATGGAGGGAGGATCTGTCCC | + |
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Preference number: 2 (lower is better) Translates to: PSLCSTPASYSHTPD*NLSMSSLDGGRICP Trigger: GGGACAGATCCTCCCTCCATCCAGAGACGACATGCTCAGGTTCAAGTCTGGAGTGTGAGAGTATGAAGCTGGGGTGCTGCATAAAGAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| 3UTR CAA 90 bp | TGCAGCCCGAGCTTCCAGAGACATTCAGCAAGGTGGTCTGTGTGTTaGTGTCTAAGTGTTCAACTACGTGCTCTGCTTATCTCCCCCAGC | + |
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Preference number: 2 (lower is better) Translates to: CSPSFQRHSARWSVC*CLSVQLRALLISPS Trigger: GCTGGGGGAGATAAGCAGAGCACGTAGTTGAACACTTAGACACAAACACACAGACCACCTTGCTGAATGTCTCTGGAAGCTCGGGCTGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| 3UTR-3UTR CCA 90 bp | CCGAGCTTCCAGAGACATTCAGCAAGGTGGTCTGTGTGTTTGTGTCTAAGTGTTCATGTCGTCTCTGGATaGAGGGAGGATCTGTCCCTG | + |
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Preference number: 2 (lower is better) Translates to: PSFQRHSARWSVCLCLSVHVVSG*REDLSL Trigger: CAGGGACAGATCCTCCCTCCATCCAGAGACGACATG...AACACTTAGACACAAACACACAGACCACCTTGCTGAATGTCTCTGGAAGCTCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| 3UTR-3UTR TCA 90 bp | GTGGTCTGTGTGTTTGTGTCTAAGTGTTCAACTACGTGCTCTGCTTATCTCCCCAGGGAATGTTCAGGGTaGGGTTGTGAGCACAGCTTG | + |
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Preference number: 2 (lower is better) Translates to: VVCVFVSKCSTTCSAYLPRECSG*GCEHSL Trigger: CAAGCTGTGCTCACAACCTCACCCTGAACATTCCCT...GGGGAGATAAGCAGAGCACGTAGTTGAACACTTAGACACAAACACACAGACCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| 3UTR-3UTR GCA 90 bp | AATGAGCATCATCCTTTGGAAGGCATCACAATAAGGCACAAACCTCGGCGCTGCAAACAGGGCAGCCACTaGAGCAGTCTGTTCATCTTG | + |
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Preference number: 2 (lower is better) Translates to: NEHHPLEGITIRHKPRRCKQGSH*SSLFIL Trigger: CAAGATGAACAGACTGCTGCAGTGGCTGCCCTGTTT...GCAGCGCCGAGGTTTGTGCCTTATTGTGATGCCTTCCAAAGGATGATGCTCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| 3UTR CAA 90 bp | AAGAGACCAAACACTACTGGGGACTGGGCGGTCAGGAACATAAATTaGTCTGTCACAGATTCAGACTCGGATTCTGTGATGGAGCATCCC | + |
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Preference number: 2 (lower is better) Translates to: KRPNTTGDWAVRNIN*SVTDSDSDSVMEHP Trigger: GGGATGCTCCATCACAGAATCCGAGTCTGAATCTGTGACAGACAAATTTATGTTCCTGACCGCCCAGTCCCCAGTAGTGTTTGGTCTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| 3UTR-3UTR TCA 90 bp | AGCTTCCAGAGACATTCAGCAAGGTGGTCTGTGTGTTTGTGTCTAAGTGTTCAATTCAGGGTGAGGTTGTaGGCACAGCTTGGTGCAGAG | + |
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Preference number: 2 (lower is better) Translates to: SFQRHSARWSVCLCLSVQFRVRL*AQLGAE Trigger: CTCTGCACCAAGCTGTGCTCACAACCTCACCCTGAA...TTGAACACTTAGACACAAACACACAGACCACCTTGCTGAATGTCTCTGGAAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| 3UTR-3UTR TCA 90 bp | TGGCTTACTCTACCAAGAACTCTTAACTCTCCTCCACCTGGCTCTCCCCCTGTCTGTGTACTAGAAGCTTaGATTTTCTGTGGCCATTCA | + |
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Preference number: 2 (lower is better) Translates to: WLTLPRTLNSPPPGSPPVCVLEA*IFCGHS Trigger: TGAATGGCCACAGAAAATTCAAGCTTCTAGTACACA...GACAGGGGGAGAGCCAGGTGGAGGAGAGTTAAGAGTTCTTGGTAGAGTAAGCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| 3UTR-3UTR TCA 90 bp | CCAAGTCAGCCTCTCTCTGATAAGCTTTGTCGATCGCTCTACTATCTCCATGACTGTGTAAAAGAGTCTTaGGACCAGGAAGTTTTTGGC | + |
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Preference number: 2 (lower is better) Translates to: PSQPLSDKLCRSLYYLHDCVKES*DQEVFG Trigger: GCCAAAAACTTCCTGGTCTCAAGACTCTTTTACACA...GTCATGGAGATAGTAGAGCGATCGACAAAGCTTATCAGAGAGAGGCTGACTTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| 3UTR-3UTR TCA 90 bp | CCTCCAAGTCAGCCTCTCTCTGATAAGCTTTGTCGATCGCTCTACTATCTCCATGCAAGATGTCAAAAATaGGCATCATCCTTTGGAAGG | + |
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Preference number: 2 (lower is better) Translates to: PPSQPLSDKLCRSLYYLHARCQK*ASSFGR Trigger: CCTTCCAAAGGATGATGCTCATTTTTGACATCTTGC...ATGGAGATAGTAGAGCGATCGACAAAGCTTATCAGAGAGAGGCTGACTTGGAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| 3UTR-3UTR TCA 90 bp | CCTCCAAGTCAGCCTCTCTCTGATAAGCTTTGTCGATCGCTCTACTATCTCCATTTAGGCAGACCATATTaGTTATGTACCTGCAACAGA | + |
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Preference number: 2 (lower is better) Translates to: PPSQPLSDKLCRSLYYLHLGRPY*LCTCNR Trigger: TCTGTTGCAGGTACATAATCAATATGGTCTGCCTAA...ATGGAGATAGTAGAGCGATCGACAAAGCTTATCAGAGAGAGGCTGACTTGGAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| 3UTR-3UTR TCA 90 bp | TGTCACTTGATTGGATCTTCCTCCAAATTAACCATCCAAGCTCTGGACTTCAGTTCTCTTTGGCCTCTGTaGCAGAAGCAAGATGTCAAA | + |
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Preference number: 2 (lower is better) Translates to: CHLIGSSSKLTIQALDFSSLWPL*QKQDVK Trigger: TTTGACATCTTGCTTCTGTCACAGAGGCCAAAGAGA...ACTGAAGTCCAGAGCTTGGATGGTTAATTTGGAGGAAGATCCAATCAAGTGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| 3UTR-3UTR CCA 90 bp | CCGAGCTTCCAGAGACATTCAGCAAGGTGGTCTGTGTGTTTGTGTCTAAGTGTTAACCTGTCACTTGATTaGATCTTCCTCCAAATTAAC | + |
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Preference number: 2 (lower is better) Translates to: PSFQRHSARWSVCLCLSVNLSLD*IFLQIN Trigger: GTTAATTTGGAGGAAGATCCAATCAAGTGACAGGTT...AACACTTAGACACAAACACACAGACCACCTTGCTGAATGTCTCTGGAAGCTCGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| 3UTR GCA 72 bp | CAGGTGCTAAGTTCAGGAGAAAGACCCATGACCAGCTaGAGCCCGAGCTTCCAGAGACATTCAGCAAGGTGG | + |
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Preference number: 3 (lower is better) Translates to: QVLSSGERPMTS*SPSFQRHSARW Trigger: CCACCTTGCTGAATGTCTCTGGAAGCTCGGGCTGCAGCTGGTCATGGGTCTTTCTCCTGAACTTAGCACCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| 3UTR-3UTR CAA 90 bp | CCGCTCATTGAGCCCCACACCACTCTCTGGCTTACTCTACCAAGAACTCTTAACGAGACCAGGAAGTTTTaGGCCTGGGCTGCTAGATGG | + |
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Preference number: 3 (lower is better) Translates to: PLIEPHTTLWLTLPRTLNETRKF*AWAARW Trigger: CCATCTAGCAGCCCAGGCCAAAAACTTCCTGGTCTC...GTTAAGAGTTCTTGGTAGAGTAAGCCAGAGAGTGGTGTGGGGCTCAATGAGCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| 3UTR GCA 72 bp | GTGGTCTGTGTGTTTGTGTCTAAGTGTTCAACTACGTaGTCTGCTTATCTCCCCCAGCTCACCCCAGATCCG | + |
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Preference number: 3 (lower is better) Translates to: VVCVFVSKCSTT*SAYLPQLTPDP Trigger: CGGATCTGGGGTGAGCTGGGGGAGATAAGCAGAGCACGTAGTTGAACACTTAGACACAAACACACAGACCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| 3UTR-3UTR CAA 90 bp | ATGACCAGCTGCAGCCCGAGCTTCCAGAGACATTCAGCAAGGTGGTCTGTGTGTTGCAGATTCTATGTGTaGTGTCTGGGCAAACAAAAT | + |
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Preference number: 3 (lower is better) Translates to: MTSCSPSFQRHSARWSVCCRFYV*CLGKQN Trigger: ATTTTGTTTGCCCAGACACAACACATAGAATCTGCA...ACACACAGACCACCTTGCTGAATGTCTCTGGAAGCTCGGGCTGCAGCTGGTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| 3UTR-3UTR CAA 90 bp | ATGACCAGCTGCAGCCCGAGCTTCCAGAGACATTCAGCAAGGTGGTCTGTGTGTTCTAATACATCTGTCTaGTTCTCTGAGGTTTGTGCT | + |
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Preference number: 3 (lower is better) Translates to: MTSCSPSFQRHSARWSVCSNTSV*FSEVCA Trigger: AGCACAAACCTCAGAGAACAAGACAGATGTATTAGA...ACACACAGACCACCTTGCTGAATGTCTCTGGAAGCTCGGGCTGCAGCTGGTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| 3UTR-3UTR CAA 90 bp | AGCTTCCAGAGACATTCAGCAAGGTGGTCTGTGTGTTTGTGTCTAAGTGTTCAATCTCACACTCCAGACTaGAACCTGAGCATGTCGTCT | + |
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Preference number: 3 (lower is better) Translates to: SFQRHSARWSVCLCLSVQSHTPD*NLSMSS Trigger: AGACGACATGCTCAGGTTCAAGTCTGGAGTGTGAGA...TTGAACACTTAGACACAAACACACAGACCACCTTGCTGAATGTCTCTGGAAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| 3UTR-3UTR CAA 90 bp | GTGGTCTGTGTGTTTGTGTCTAAGTGTTCAACTACGTGCTCTGCTTATCTCCCCGTCAGGAACATAAATTaGTCTGTCACAGATTCAGAC | + |
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Preference number: 3 (lower is better) Translates to: VVCVFVSKCSTTCSAYLPVRNIN*SVTDSD Trigger: GTCTGAATCTGTGACAGACAAATTTATGTTCCTGAC...GGGGAGATAAGCAGAGCACGTAGTTGAACACTTAGACACAAACACACAGACCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| 3UTR GCA 72 bp | GGGAATGTTCAGGGTGAGGTTGTGAGCACAGCTTGGTaGAGAGTTAGGATGAAGAGTCATATGTGTATTTAT | + |
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Preference number: 3 (lower is better) Translates to: GNVQGEVVSTAW*RVRMKSHMCIY Trigger: ATAAATACACATATGACTCTTCATCCTAACTCTGCACCAAGCTGTGCTCACAACCTCACCCTGAACATTCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| 3UTR CCA 72 bp | AATGGACTGGCAGAATTCCCTAACCTGTCACTTGATTaGATCTTCCTCCAAATTAACCATCCAAGCTCTGGA | + |
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Preference number: 3 (lower is better) Translates to: NGLAEFPNLSLD*IFLQINHPSSG Trigger: TCCAGAGCTTGGATGGTTAATTTGGAGGAAGATCCAATCAAGTGACAGGTTAGGGAATTCTGCCAGTCCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| 3UTR CCA 72 bp | AGGTTCTATCTAGAGAAGATGGAGAATGACAATAACTaGTGTGACGTGTCCAACCCCAAACATACAGGAAAC | + |
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Preference number: 3 (lower is better) Translates to: RFYLEKMENDNN*CDVSNPKHTGN Trigger: GTTTCCTGTATGTTTGGGGTTGGACACGTCACACCAGTTATTGTCATTCTCCATCTTCTCTAGATAGAACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| 3UTR CCA 72 bp | TCCAAGCTCTGGACTTCAGTGCCCATTCTTATAAAATaGGAAGAATATCAATCGTCTGTTCTCTTTGGCCTC | + |
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Preference number: 3 (lower is better) Translates to: SKLWTSVPILIK*EEYQSSVLFGL Trigger: GAGGCCAAAGAGAACAGACGATTGATATTCTTCCCATTTTATAAGAATGGGCACTGAAGTCCAGAGCTTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| 3UTR CCA 72 bp | AATCAGAGAGCTCTGTATACTCGCTCTATGCATCTATaGGTGTACCTAGTCATTGTTCTCTGTGTACTGTAC | + |
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Preference number: 3 (lower is better) Translates to: NQRALYTRSMHL*VYLVIVLCVLY Trigger: GTACAGTACACAGAGAACAATGACTAGGTACACCCATAGATGCATAGAGCGAGTATACAGAGCTCTCTGATT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| 3UTR-3UTR CAA 90 bp | TGTCACTTGATTGGATCTTCCTCCAAATTAACCATCCAAGCTCTGGACTTCAGTAATGAGCATCATCCTTaGGAAGGCATCACAATAAGG | + |
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Preference number: 3 (lower is better) Translates to: CHLIGSSSKLTIQALDFSNEHHP*EGITIR Trigger: CCTTATTGTGATGCCTTCCAAAGGATGATGCTCATT...ACTGAAGTCCAGAGCTTGGATGGTTAATTTGGAGGAAGATCCAATCAAGTGACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| 3UTR TCA 72 bp | GGAAGAATATCAATCGTCTGTTCTCTTTGGCCTCTGTaGCAGAAGCAAGATGTCAAAAATGAGCATCATCCT | + |
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Preference number: 3 (lower is better) Translates to: GRISIVCSLWPL*QKQDVKNEHHP Trigger: AGGATGATGCTCATTTTTGACATCTTGCTTCTGTCACAGAGGCCAAAGAGAACAGACGATTGATATTCTTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| CDS-3UTR CCA 90 bp | AACGGGAGCGCCAAGGCCAAGAGACCAAACACTACTGGGGACTGGGCGGTCAGGGCAGCCTCGCTGTGCTaGAGCACCAGGGGTGAGCTC | + |
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Preference number: 4 (lower is better) Translates to: NGSAKAKRPNTTGDWAVRAASLC*STRGEL Trigger: GAGCTCACCCCTGGTGCTCCAGCACAGCGAGGCTGC...CCTGACCGCCCAGTCCCCAGTAGTGTTTGGTCTCTTGGCCTTGGCGCTCCCGTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| CDS-3UTR TCA 90 bp | GACTCGGATTCTGTGATGGAGCATCCCCAAACAGGGCAGCCACTGCAGCAGTCTCCGCCTGAGTGGGACTaGAACCTGTGGCCTGGGGCA | + |
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Preference number: 4 (lower is better) Translates to: DSDSVMEHPQTGQPLQQSPPEWD*NLWPGA Trigger: TGCCCCAGGCCACAGGTTTCAGTCCCACTCAGGCGG...AGACTGCTGCAGTGGCTGCCCTGTTTGGGGATGCTCCATCACAGAATCCGAGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| CDS-3UTR TCA 90 bp | AACGGGAGCGCCAAGGCCAAGAGACCAAACACTACTGGGGACTGGGCGGTCAGGGACTCAAGAACACCCTaGCCCTGGGACAGGAGATCC | + |
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Preference number: 4 (lower is better) Translates to: NGSAKAKRPNTTGDWAVRDSRTP*PWDRRS Trigger: GGATCTCCTGTCCCAGGGTCAGGGTGTTCTTGAGTC...CCTGACCGCCCAGTCCCCAGTAGTGTTTGGTCTCTTGGCCTTGGCGCTCCCGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| CDS-3UTR CCA 90 bp | GACTCGGATTCTGTGATGGAGCATCCCCAAACAGGGCAGCCACTGCAGCAGTCTGGGCTTGGGGTTCTGTaGCAGGAGGTCCAGTTGGCC | + |
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Preference number: 4 (lower is better) Translates to: DSDSVMEHPQTGQPLQQSGLGVL*QEVQLA Trigger: GGCCAACTGGACCTCCTGCCACAGAACCCCAAGCCC...AGACTGCTGCAGTGGCTGCCCTGTTTGGGGATGCTCCATCACAGAATCCGAGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| CDS-3UTR TCA 90 bp | ATGACCAGCTGCAGCCCGAGCTTCCAGAGACATTCAGCAAGGTGGTCTGTGTGTGGCAGGACCTGGGGATaGGGACCCCATACCCATGTC | + |
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Preference number: 4 (lower is better) Translates to: MTSCSPSFQRHSARWSVCGRTWG*GPHTHV Trigger: GACATGGGTATGGGGTCCTCATCCCCAGGTCCTGCC...ACACACAGACCACCTTGCTGAATGTCTCTGGAAGCTCGGGCTGCAGCTGGTCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| CDS-3UTR TCA 90 bp | ATGACCAGCTGCAGCCCGAGCTTCCAGAGACATTCAGCAAGGTGGTCTGTGTGTCCCGCTCTTCGGAGATaGCCTGAAGGTAGGCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: MTSCSPSFQRHSARWSVCPALRR*PEGRQP Trigger: AGGCTGCCTACCTTCAGGTCATCTCCGAAGAGCGGG...ACACACAGACCACCTTGCTGAATGTCTCTGGAAGCTCGGGCTGCAGCTGGTCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| CDS-3UTR CCA 90 bp | CCGCTCATTGAGCCCCACACCACTCTCTGGCTTACTCTACCAAGAACTCTTAACCTGAAACCTGTGGCCTaGGGCACTTCAGGCCAGCCC | + |
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Preference number: 4 (lower is better) Translates to: PLIEPHTTLWLTLPRTLNLKPVA*GTSGQP Trigger: GGGCTGGCCTGAAGTGCCCCAGGCCACAGGTTTCAG...GTTAAGAGTTCTTGGTAGAGTAAGCCAGAGAGTGGTGTGGGGCTCAATGAGCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| CDS-3UTR CCA 90 bp | GTGGTCTGTGTGTTTGTGTCTAAGTGTTCAACTACGTGCTCTGCTTATCTCCCCGGACGCCACGTCGGCTaGAGGCCTCCATCAGGTCGC | + |
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Preference number: 4 (lower is better) Translates to: VVCVFVSKCSTTCSAYLPGRHVG*RPPSGR Trigger: GCGACCTGATGGAGGCCTCCAGCCGACGTGGCGTCC...GGGGAGATAAGCAGAGCACGTAGTTGAACACTTAGACACAAACACACAGACCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| CDS-3UTR TCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAAAGAGTCTTGAGACCAGGAAGTCTGGAGCACCAGGGGTaGGCTCTCCCTCCACCAGGG | + |
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Preference number: 4 (lower is better) Translates to: VCVCVCVCVCKRVLRPGSLEHQG*ALPPPG Trigger: CCCTGGTGGAGGGAGAGCTCACCCCTGGTGCTCCAG...ACTTCCTGGTCTCAAGACTCTTTTACACACACACACACACACACACACACACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| CDS-3UTR TCA 90 bp | TGGCTTACTCTACCAAGAACTCTTAACTCTCCTCCACCTGGCTCTCCCCCTGTCCCCCACGCACATGGCTaGTCATGTAGTCCACGTCCA | + |
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Preference number: 4 (lower is better) Translates to: WLTLPRTLNSPPPGSPPVPHAHG*SCSPRP Trigger: TGGACGTGGACTACATGATCAGCCATGTGCGTGGGG...GACAGGGGGAGAGCCAGGTGGAGGAGAGTTAAGAGTTCTTGGTAGAGTAAGCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| CDS-3UTR TCA 90 bp | CCGCTCATTGAGCCCCACACCACTCTCTGGCTTACTCTACCAAGAACTCTTAACGCCCTCCACAGGCTGTaGCTCCGCATACAGACATCG | + |
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Preference number: 4 (lower is better) Translates to: PLIEPHTTLWLTLPRTLNALHRL*LRIQTS Trigger: CGATGTCTGTATGCGGAGTCACAGCCTGTGGAGGGC...GTTAAGAGTTCTTGGTAGAGTAAGCCAGAGAGTGGTGTGGGGCTCAATGAGCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| CDS-3UTR CCA 90 bp | GACTCGGATTCTGTGATGGAGCATCCCCAAACAGGGCAGCCACTGCAGCAGTCTAAGTCTTCCACAATGTaGCCCCTCAGCTGCAGTACC | + |
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Preference number: 4 (lower is better) Translates to: DSDSVMEHPQTGQPLQQSKSSTM*PLSCST Trigger: GGTACTGCAGCTGAGGGGCCACATTGTGGAAGACTT...AGACTGCTGCAGTGGCTGCCCTGTTTGGGGATGCTCCATCACAGAATCCGAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| CDS-3UTR CCA 90 bp | CCGCTCATTGAGCCCCACACCACTCTCTGGCTTACTCTACCAAGAACTCTTAACGTTCTGGGGGACAACTaGGTCCAGGTCCCTCACTCC | + |
|
Preference number: 4 (lower is better) Translates to: PLIEPHTTLWLTLPRTLNVLGDN*VQVPHS Trigger: GGAGTGAGGGACCTGGACCCAGTTGTCCCCCAGAAC...GTTAAGAGTTCTTGGTAGAGTAAGCCAGAGAGTGGTGTGGGGCTCAATGAGCGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| 3UTR CAA 72 bp | TGCAGCACCCCAGCTTCATACTCTCACACTCCAGACTaGAACCTGAGCATGTCGTCTCTGGATGGAGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: CSTPASYSHTPD*NLSMSSLDGGR Trigger: CCTCCCTCCATCCAGAGACGACATGCTCAGGTTCAAGTCTGGAGTGTGAGAGTATGAAGCTGGGGTGCTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| CDS-3UTR CCA 90 bp | CCAGATCCGCTCATTGAGCCCCACACCACTCTCTGGCTTACTCTACCAAGAACTAGGTCCAGTTTGCTGTaGCCCAAGGTCAGCCGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: PDPLIEPHTTLWLTLPRTRSSLL*PKVSRF Trigger: GAAACGGCTGACCTTGGGCCACAGCAAACTGGACCT...AGTTCTTGGTAGAGTAAGCCAGAGAGTGGTGTGGGGCTCAATGAGCGGATCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| CDS-3UTR TCA 90 bp | CCTCCAAGTCAGCCTCTCTCTGATAAGCTTTGTCGATCGCTCTACTATCTCCATCCGTTTGGGCCTGGCTaGAGAGGAATCGCAGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PPSQPLSDKLCRSLYYLHPFGPG*RGIAAG Trigger: ACCTGCTGCGATTCCTCTTCAGCCAGGCCCAAACGG...ATGGAGATAGTAGAGCGATCGACAAAGCTTATCAGAGAGAGGCTGACTTGGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| CDS-3UTR CCA 90 bp | CCAAGTCAGCCTCTCTCTGATAAGCTTTGTCGATCGCTCTACTATCTCCATGACAAGGTCTCTGACCCCTaGGCCTCGCTGAGCTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PSQPLSDKLCRSLYYLHDKVSDP*ASLSSG Trigger: TCCTGAGCTCAGCGAGGCCCAGGGGTCAGAGACCTT...GTCATGGAGATAGTAGAGCGATCGACAAAGCTTATCAGAGAGAGGCTGACTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| CDS-3UTR CCA 90 bp | CCTCCAAGTCAGCCTCTCTCTGATAAGCTTTGTCGATCGCTCTACTATCTCCATAACTTCTCCAGGGCCTaGCCGGTGAATCGGCGACCT | + |
|
Preference number: 4 (lower is better) Translates to: PPSQPLSDKLCRSLYYLHNFSRA*PVNRRP Trigger: AGGTCGCCGATTCACCGGCCAGGCCCTGGAGAAGTT...ATGGAGATAGTAGAGCGATCGACAAAGCTTATCAGAGAGAGGCTGACTTGGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| CDS-3UTR TCA 90 bp | CCGCTCATTGAGCCCCACACCACTCTCTGGCTTACTCTACCAAGAACTCTTAACCTTCAGAGAGCATGCTaGGGTCTTGGCCTAAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: PLIEPHTTLWLTLPRTLNLQRAC*GLGLRS Trigger: AGACCTTAGGCCAAGACCTCAGCATGCTCTCTGAAG...GTTAAGAGTTCTTGGTAGAGTAAGCCAGAGAGTGGTGTGGGGCTCAATGAGCGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| CDS-3UTR GCA 90 bp | TGTGTGTGTGTGTGTGTGTGTAAAAGAGTCTTGAGACCAGGAAGTTTTTGGCCTCTGTCTCCAGAGCTGTaGCAGGTACCCAACGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCVCKRVLRPGSFWPLSPEL*QVPNGR Trigger: GCGGCCGTTGGGTACCTGGCACAGCTCTGGAGACAG...AGGCCAAAAACTTCCTGGTCTCAAGACTCTTTTACACACACACACACACACACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| CDS-3UTR CCA 90 bp | CCGCTCATTGAGCCCCACACCACTCTCTGGCTTACTCTACCAAGAACTCTTAACTTGACGATACAGGGATaGCTGGCCACCAGCTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: PLIEPHTTLWLTLPRTLNLTIQG*LATSFM Trigger: CATGAAGCTGGTGGCCAGCCATCCCTGTATCGTCAA...GTTAAGAGTTCTTGGTAGAGTAAGCCAGAGAGTGGTGTGGGGCTCAATGAGCGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| CDS-3UTR CCA 90 bp | CCGAGCTTCCAGAGACATTCAGCAAGGTGGTCTGTGTGTTTGTGTCTAAGTGTTCTGAGGCGATCCAGGTaGTCATGGCTTTGGCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PSFQRHSARWSVCLCLSVLRRSR*SWLWLR Trigger: CCTGAGCCAAAGCCATGACCACCTGGATCGCCTCAG...AACACTTAGACACAAACACACAGACCACCTTGCTGAATGTCTCTGGAAGCTCGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| CDS-3UTR GCA 90 bp | GTGGTCTGTGTGTTTGTGTCTAAGTGTTCAACTACGTGCTCTGCTTATCTCCCCAGCCTACTCCAGCCATaGGAACTGGGCTTGGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VVCVFVSKCSTTCSAYLPSLLQP*ELGLVL Trigger: CAGAACCAAGCCCAGTTCGCATGGCTGGAGTAGGCT...GGGGAGATAAGCAGAGCACGTAGTTGAACACTTAGACACAAACACACAGACCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| CDS-3UTR CCA 90 bp | GTGGTCTGTGTGTTTGTGTCTAAGTGTTCAACTACGTGCTCTGCTTATCTCCCCAGTACCATGCTGGTGTaGGCCTGGCTGCATAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: VVCVFVSKCSTTCSAYLPSTMLV*AWLHSQ Trigger: TTGGCTATGCAGCCAGGCCCACACCAGCATGGTACT...GGGGAGATAAGCAGAGCACGTAGTTGAACACTTAGACACAAACACACAGACCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAAAGAGTCTTGAGACCAGGAAGTGCTGCAGTACCATGCTaGTGTGGGCCTGGCTGCATA | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVCVCKRVLRPGSAAVPC*CGPGCI Trigger: TATGCAGCCAGGCCCACACCAGCATGGTACTGCAGC...ACTTCCTGGTCTCAAGACTCTTTTACACACACACACACACACACACACACACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| CDS-3UTR CCA 90 bp | TGTGTGTGTGTGTGTGTGTGTAAAAGAGTCTTGAGACCAGGAAGTTTTTGGCCTAGAGGACTGGGACCATaGCGATGCGCCCAGCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCVCKRVLRPGSFWPRGLGP*RCAQLA Trigger: AGCAAGCTGGGCGCATCGCCATGGTCCCAGTCCTCT...AGGCCAAAAACTTCCTGGTCTCAAGACTCTTTTACACACACACACACACACACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| CDS-3UTR GCA 90 bp | TGTGTGTGTGTGTGTGTGTGTAAAAGAGTCTTGAGACCAGGAAGTTTTTGGCCTATGTGGCCCCTCAGCTaGAGTACCATGCTGGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCVCKRVLRPGSFWPMWPLS*STMLVW Trigger: CCACACCAGCATGGTACTGCAGCTGAGGGGCCACAT...AGGCCAAAAACTTCCTGGTCTCAAGACTCTTTTACACACACACACACACACACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| CDS-3UTR GCA 90 bp | CCGAGCTTCCAGAGACATTCAGCAAGGTGGTCTGTGTGTTTGTGTCTAAGTGTTCAGTCGCTTCTCATCTaGAGAGCCTACTCCAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: PSFQRHSARWSVCLCLSVQSLLI*RAYSSH Trigger: ATGGCTGGAGTAGGCTCTGCAGATGAGAAGCGACTG...AACACTTAGACACAAACACACAGACCACCTTGCTGAATGTCTCTGGAAGCTCGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| CDS-3UTR GCA 90 bp | TGGCTTACTCTACCAAGAACTCTTAACTCTCCTCCACCTGGCTCTCCCCCTGTCGTGCAAACAGGTCATTaGTACTACCATTCTGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: WLTLPRTLNSPPPGSPPVVQTGH*YYHSDG Trigger: GCCATCAGAATGGTAGTAGCAATGACCTGTTTGCAC...GACAGGGGGAGAGCCAGGTGGAGGAGAGTTAAGAGTTCTTGGTAGAGTAAGCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| CDS-3UTR CCA 90 bp | TGTGTGTGTGTGTGTGTGTGTAAAAGAGTCTTGAGACCAGGAAGTTTTTGGCCTTCCAGCCATGCGAACTaGGCTTGGTTCTGGGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCVCKRVLRPGSFWPSSHAN*AWFWGT Trigger: TGTCCCCCAGAACCAAGCCCAGTTCGCATGGCTGGA...AGGCCAAAAACTTCCTGGTCTCAAGACTCTTTTACACACACACACACACACACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| CDS-3UTR CCA 90 bp | ACCATCCAAGCTCTGGACTTCAGTGCCCATTCTTATAAAATGGGAAGAATATCAACTCACGGGAGCCCCTaGGATGCCCGGCTCAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: TIQALDFSAHSYKMGRISTHGSP*DARLRF Trigger: AAACCTGAGCCGGGCATCCCAGGGGCTCCCGTGAGT...TGATATTCTTCCCATTTTATAAGAATGGGCACTGAAGTCCAGAGCTTGGATGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| CDS-3UTR TCA 90 bp | GTACATAGAAACACAGGAACTGCAGATTCTATGTGTTGTGTCTGGGCAAACAAAACTTGGGAGCAGAGGTaGCCCCACTGCCAGGGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: VHRNTGTADSMCCVWANKTWEQR*PHCQGQ Trigger: TTGACCCTGGCAGTGGGGTCACCTCTGCTCCCAAGT...TTTGTTTGCCCAGACACAACACATAGAATCTGCAGTTCCTGTGTTTCTATGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| CDS-3UTR CCA 90 bp | AGCTTCCAGAGACATTCAGCAAGGTGGTCTGTGTGTTTGTGTCTAAGTGTTCAAAGCATGCTGAGGTCTTaGCCTAAGGTCTCTGACCCC | + |
|
Preference number: 4 (lower is better) Translates to: SFQRHSARWSVCLCLSVQSMLRS*PKVSDP Trigger: GGGGTCAGAGACCTTAGGCCAAGACCTCAGCATGCT...TTGAACACTTAGACACAAACACACAGACCACCTTGCTGAATGTCTCTGGAAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| CDS-3UTR CCA 90 bp | TGGCAGAATTCCCTAACCTGTCACTTGATTGGATCTTCCTCCAAATTAACCATCACCACCGTTTGGGCCTaGCTGAAGAGGAATCGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: WQNSLTCHLIGSSSKLTITTVWA*LKRNRS Trigger: GCTGCGATTCCTCTTCAGCCAGGCCCAAACGGTGGT...GATGGTTAATTTGGAGGAAGATCCAATCAAGTGACAGGTTAGGGAATTCTGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| CDS-3UTR CCA 90 bp | ACCATCCAAGCTCTGGACTTCAGTGCCCATTCTTATAAAATGGGAAGAATATCATGGGAGCCCATTCTCTaGAAGCCGGGACAGTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TIQALDFSAHSYKMGRISWEPIL*KPGQCW Trigger: CCAGCACTGTCCCGGCTTCCAGAGAATGGGCTCCCA...TGATATTCTTCCCATTTTATAAGAATGGGCACTGAAGTCCAGAGCTTGGATGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAAAGAGTCTTGAGACCAGGAAGTGACCTGGGGCATCAGTaGATCCTCATTGCTACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVCVCKRVLRPGSDLGHQ*ILIATE Trigger: TTCTGTAGCAATGAGGATCCACTGATGCCCCAGGTC...ACTTCCTGGTCTCAAGACTCTTTTACACACACACACACACACACACACACACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| CDS-3UTR CCA 90 bp | ACCATCCAAGCTCTGGACTTCAGTGCCCATTCTTATAAAATGGGAAGAATATCAAGGTCCAGTTTGCTGTaGCCCAGGGTCAGTCGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TIQALDFSAHSYKMGRISRSSLL*PRVSRF Trigger: GAAGCGACTGACCCTGGGCCACAGCAAACTGGACCT...TGATATTCTTCCCATTTTATAAGAATGGGCACTGAAGTCCAGAGCTTGGATGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| CDS-3UTR GCA 90 bp | TTAACCATCCAAGCTCTGGACTTCAGTGCCCATTCTTATAAAATGGGAAGAATAGGTGAATCGGCGACCTaGCTTGCTGCAGTACGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LTIQALDFSAHSYKMGRIGESAT*LAAVRV Trigger: GACACGTACTGCAGCAAGGCAGGTCGCCGATTCACC...TATTCTTCCCATTTTATAAGAATGGGCACTGAAGTCCAGAGCTTGGATGGTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| CDS-3UTR GCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAAAGAGTCTTGAGACCAGGAAGTCAGCCGTTTCTCAGGTaGAAACAGGTCATTGCTACT | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVCVCKRVLRPGSQPFLR*KQVIAT Trigger: AGTAGCAATGACCTGTTTGCACCTGAGAAACGGCTG...ACTTCCTGGTCTCAAGACTCTTTTACACACACACACACACACACACACACACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| CDS-3UTR CCA 90 bp | ACCATCCAAGCTCTGGACTTCAGTGCCCATTCTTATAAAATGGGAAGAATATCAACAGCCACCACCGTTTaGGCCTGGCTGAAGAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: TIQALDFSAHSYKMGRISTATTV*AWLKRN Trigger: ATTCCTCTTCAGCCAGGCCCAAACGGTGGTGGCTGT...TGATATTCTTCCCATTTTATAAGAATGGGCACTGAAGTCCAGAGCTTGGATGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| CDS-3UTR CCA 90 bp | GTACATAGAAACACAGGAACTGCAGATTCTATGTGTTGTGTCTGGGCAAACAAAATGCTGGTGTGGGCCTaGCTGCATAGCCAAGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VHRNTGTADSMCCVWANKMLVWA*LHSQVK Trigger: CTTCACTTGGCTATGCAGCCAGGCCCACACCAGCAT...TTTGTTTGCCCAGACACAACACATAGAATCTGCAGTTCCTGTGTTTCTATGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| CDS-3UTR CCA 90 bp | TGGACTTCAGTGCCCATTCTTATAAAATGGGAAGAATATCAATCGTCTGTTCTCGGAAGGCTAGGGTCTTaGCTTGCTGGGAGCCCATTC | + |
|
Preference number: 4 (lower is better) Translates to: WTSVPILIKWEEYQSSVLGRLGS*LAGSPF Trigger: GAATGGGCTCCCAGCAAGCCAAGACCCTAGCCTTCC...GAGAACAGACGATTGATATTCTTCCCATTTTATAAGAATGGGCACTGAAGTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAAAGAGTCTTGAGACCAGGAAGTAGGTGGTCATGGCTTTaGCTCAGGGATACTTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVCVCKRVLRPGSRWSWL*LRDTFF Trigger: GAAGAAAGTATCCCTGAGCCAAAGCCATGACCACCT...ACTTCCTGGTCTCAAGACTCTTTTACACACACACACACACACACACACACACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| 3UTR CAA 72 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTAAAAGAGTCTaGAGACCAGGAAGTTTTTGGCCTGGGCTGCTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCVCVCKRV*RPGSFWPGLLD Trigger: ATCTAGCAGCCCAGGCCAAAAACTTCCTGGTCTCAAGACTCTTTTACACACACACACACACACACACACACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| 3UTR CAA 72 bp | AACACTACTGGGGACTGGGCGGTCAGGAACATAAATTaGTCTGTCACAGATTCAGACTCGGATTCTGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: NTTGDWAVRNIN*SVTDSDSDSVM Trigger: CATCACAGAATCCGAGTCTGAATCTGTGACAGACAAATTTATGTTCCTGACCGCCCAGTCCCCAGTAGTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| CDS-3UTR GCA 90 bp | ACCATCCAAGCTCTGGACTTCAGTGCCCATTCTTATAAAATGGGAAGAATATCAGAAGCTGTAACTGCCTaGCACCACCTGTTCACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: TIQALDFSAHSYKMGRISEAVTA*HHLFTV Trigger: GACTGTGAACAGGTGGTGGCAGGCAGTTACAGCTTC...TGATATTCTTCCCATTTTATAAGAATGGGCACTGAAGTCCAGAGCTTGGATGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| CDS-3UTR CCA 90 bp | TGTGTGTGTGTGTGTGTGTGTAAAAGAGTCTTGAGACCAGGAAGTTTTTGGCCTAGTTGGCCATGGTTATaGTTTAGGGACAGCTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCVCKRVLRPGSFWPSWPWL*FRDSFL Trigger: CAGGAAGCTGTCCCTAAACCATAACCATGGCCAACT...AGGCCAAAAACTTCCTGGTCTCAAGACTCTTTTACACACACACACACACACACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| CDS-3UTR TCA 90 bp | TTAACCATCCAAGCTCTGGACTTCAGTGCCCATTCTTATAAAATGGGAAGAATAGGAGCTCCATGTCAGTaGAAACGTCCATCACCACAG | + |
|
Preference number: 4 (lower is better) Translates to: LTIQALDFSAHSYKMGRIGAPCQ*KRPSPQ Trigger: CTGTGGTGATGGACGTTTTCACTGACATGGAGCTCC...TATTCTTCCCATTTTATAAGAATGGGCACTGAAGTCCAGAGCTTGGATGGTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| CDS-3UTR TCA 90 bp | GTACATAGAAACACAGGAACTGCAGATTCTATGTGTTGTGTCTGGGCAAACAAATTGGGATCTGAAAGTTaGCGATACAGGGATGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VHRNTGTADSMCCVWANKLGSES*RYRDGW Trigger: CCAGCCATCCCTGTATCGTCAACTTTCAGATCCCAA...TTTGTTTGCCCAGACACAACACATAGAATCTGCAGTTCCTGTGTTTCTATGTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| CDS-3UTR TCA 90 bp | TGGACTTCAGTGCCCATTCTTATAAAATGGGAAGAATATCAATCGTCTGTTCTCTCAGCTCACCAGGTCTaGGGGAACCTGACTCAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: WTSVPILIKWEEYQSSVLSAHQV*GNLTQE Trigger: TTCTTGAGTCAGGTTCCCTCAGACCTGGTGAGCTGA...GAGAACAGACGATTGATATTCTTCCCATTTTATAAGAATGGGCACTGAAGTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| 3UTR CAA 72 bp | AGGACAATGGACTGGCAGAATTCCCTAACCTGTCACTaGATTGGATCTTCCTCCAAATTAACCATCCAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RTMDWQNSLTCH*IGSSSKLTIQA Trigger: AGCTTGGATGGTTAATTTGGAGGAAGATCCAATCAAGTGACAGGTTAGGGAATTCTGCCAGTCCATTGTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| CDS-3UTR TCA 90 bp | TGTCACTTGATTGGATCTTCCTCCAAATTAACCATCCAAGCTCTGGACTTCAGTGACTTCGGAGCTGCTTaGATTTGGACTTGTTGTATT | + |
|
Preference number: 4 (lower is better) Translates to: CHLIGSSSKLTIQALDFSDFGAA*IWTCCI Trigger: AATACAACAAGTCCAAATTCAAGCAGCTCCGAAGTC...ACTGAAGTCCAGAGCTTGGATGGTTAATTTGGAGGAAGATCCAATCAAGTGACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
||
| CDS-3UTR GCA 90 bp | ACCATCCAAGCTCTGGACTTCAGTGCCCATTCTTATAAAATGGGAAGAATATCAAAGCGACTTCGGAGCTaGTTGAATTTGGACTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: TIQALDFSAHSYKMGRISKRLRS*LNLDLL Trigger: CAACAAGTCCAAATTCAAGCAGCTCCGAAGTCGCTT...TGATATTCTTCCCATTTTATAAGAATGGGCACTGAAGTCCAGAGCTTGGATGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
||
| CDS-3UTR CCA 90 bp | GTACATAGAAACACAGGAACTGCAGATTCTATGTGTTGTGTCTGGGCAAACAAAGAGGGGAGATATGGTTaGGATCTGAAAGTTGACGAT | + |
|
Preference number: 4 (lower is better) Translates to: VHRNTGTADSMCCVWANKEGRYG*DLKVDD Trigger: ATCGTCAACTTTCAGATCCCAACCATATCTCCCCTC...TTTGTTTGCCCAGACACAACACATAGAATCTGCAGTTCCTGTGTTTCTATGTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
||
| CDS GCA 90 bp | CCCCGTTCCAGGAGGGCATCTGCCGCCAGTCTTGCAGCCTCGCTGTaGTGGAGCACCAGGGGTGAGCTCTCCCTCCACCAGGGCCGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PRSRRASAASLAASL*WSTRGELSLHQGRF Trigger: GAAGCGGCCCTGGTGGAGGGAGAGCTCACCCCTGGTGCTCCAGCACAGCGAGGCTGCAAGACTGGCGGCAGATGCCCTCCTGGAACGGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029143.7 ENSMUST00000239423.2 |
||
| CDS CCA 90 bp | CGTTCCAGGAGGGCATCTGCCGCCAGTCTTGCAGCCTCGCTGTGCTaGAGCACCAGGGGTGAGCTCTCCCTCCACCAGGGCCGCTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RSRRASAASLAASLC*STRGELSLHQGRFS Trigger: GCTGAAGCGGCCCTGGTGGAGGGAGAGCTCACCCCTGGTGCTCCAGCACAGCGAGGCTGCAAGACTGGCGGCAGATGCCCTCCTGGAACG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029143.7 ENSMUST00000239423.2 |
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| CDS TCA 90 bp | CCACGTCCAGGGCACTCAGGAAGGGCAGCTCCCGCTCTTCGGAGATaGCCTGAAGGTAGGCAGCCTCTCCCCGTTCCAGGAGGGCATCTG | + |
|
Preference number: 5 (lower is better) Translates to: PRPGHSGRAAPALRR*PEGRQPLPVPGGHL Trigger: CAGATGCCCTCCTGGAACGGGGAGAGGCTGCCTACCTTCAGGTCATCTCCGAAGAGCGGGAGCTGCCCTTCCTGAGTGCCCTGGACGTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029143.7 ENSMUST00000239423.2 |
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| CDS TCA 90 bp | GAGGTGACCCCACTGCCAGGGTCAAAGGACTGGTACTGCTGTGGTTaGGGGCGGGAGAGGACTGGGACCATGGCGATGCGCCCAGCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: EVTPLPGSKDWYCCG*GRERTGTMAMRPAC Trigger: GCAAGCTGGGCGCATCGCCATGGTCCCAGTCCTCTCCCGCCCTCAACCACAGCAGTACCAGTCCTTTGACCCTGGCAGTGGGGTCACCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029143.7 ENSMUST00000239423.2 |
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| CDS GCA 90 bp | GGTACTGCTGTGGTTGAGGGCGGGAGAGGACTGGGACCATGGCGATaGGCCCAGCTTGCTCAGGTTGGCCCTATAGGGTCCAGGAGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: GTAVVEGGRGLGPWR*AQLAQVGPIGSRRG Trigger: TCCCCTCCTGGACCCTATAGGGCCAACCTGAGCAAGCTGGGCGCATCGCCATGGTCCCAGTCCTCTCCCGCCCTCAACCACAGCAGTACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029143.7 ENSMUST00000239423.2 |
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| CDS CCA 90 bp | AGCAGAGGTGACCCCACTGCCAGGGTCAAAGGACTGGTACTGCTGTaGTTGAGGGCGGGAGAGGACTGGGACCATGGCGATGCGCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SRGDPTARVKGLVLL*LRAGEDWDHGDAPS Trigger: GCTGGGCGCATCGCCATGGTCCCAGTCCTCTCCCGCCCTCAACCACAGCAGTACCAGTCCTTTGACCCTGGCAGTGGGGTCACCTCTGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029143.7 ENSMUST00000239423.2 |
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| CDS CCA 90 bp | AGAGCTGTGCCAGGTACCCAACGGCCGCGTGGAAGGCTAGGGTCTTaGCTTGCTGGGAGCCCATTCTCTGGAAGCCGGGACAGTGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: RAVPGTQRPRGRLGS*LAGSPFSGSRDSAG Trigger: CCCAGCACTGTCCCGGCTTCCAGAGAATGGGCTCCCAGCAAGCCAAGACCCTAGCCTTCCACGCGGCCGTTGGGTACCTGGCACAGCTCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029143.7 ENSMUST00000239423.2 |
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| CDS CCA 90 bp | CGCTTCAGCTCCTCCACCCGGCTCCGCAGGGGTCCTGCCATGCCCTaGGTCCCAGCGGGTGCTATTCGGCTAAATGTGCGTATCCACCTA | + |
|
Preference number: 5 (lower is better) Translates to: RFSSSTRLRRGPAMP*VPAGAIRLNVRIHL Trigger: TAGGTGGATACGCACATTTAGCCGAATAGCACCCGCTGGGACCCAGGGCATGGCAGGACCCCTGCGGAGCCGGGTGGAGGAGCTGAAGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239423.2 |
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| CDS CCA 90 bp | AGGACTGGTACTGCTGTGGTTGAGGGCGGGAGAGGACTGGGACCATaGCGATGCGCCCAGCTTGCTCAGGTTGGCCCTATAGGGTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: RTGTAVVEGGRGLGP*RCAQLAQVGPIGSR Trigger: CCTGGACCCTATAGGGCCAACCTGAGCAAGCTGGGCGCATCGCCATGGTCCCAGTCCTCTCCCGCCCTCAACCACAGCAGTACCAGTCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029143.7 ENSMUST00000239423.2 |
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| CDS GCA 90 bp | CATGGTAGGCAGGACCTGGGGATGAGGACCCCATACCCATGTCATTaGGGCCACCACCTCCGGGTAGAGCAAGATAGGAAGACCGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: HGRQDLGMRTPYPCH*GHHLRVEQDRKTGP Trigger: TGGCCCGGTCTTCCTATCTTGCTCTACCCGGAGGTGGTGGCCGCAATGACATGGGTATGGGGTCCTCATCCCCAGGTCCTGCCTACCATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029143.7 ENSMUST00000239423.2 |
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| CDS CCA 90 bp | CTCTTCCACTGTCTCCAGAGCTGTGCCAGGTACCCAACGGCCGCGTaGAAGGCTAGGGTCTTGGCTTGCTGGGAGCCCATTCTCTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LFHCLQSCARYPTAA*KARVLACWEPILWK Trigger: CTTCCAGAGAATGGGCTCCCAGCAAGCCAAGACCCTAGCCTTCCACGCGGCCGTTGGGTACCTGGCACAGCTCTGGAGACAGTGGAAGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029143.7 ENSMUST00000239423.2 |
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| CDS CCA 90 bp | CAGGTCATTGCTACTACCATTCTGATGGCCACTCACGGGAGCCCCTaGGATGCCCGGCTCAGGTTTCTGCCTGGCACCCTGCAGCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: QVIATTILMATHGSP*DARLRFLPGTLQLM Trigger: CATCAGCTGCAGGGTGCCAGGCAGAAACCTGAGCCGGGCATCCCAGGGGCTCCCGTGAGTGGCCATCAGAATGGTAGTAGCAATGACCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029143.7 ENSMUST00000239423.2 |
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| CDS-3UTR CAA 90 bp | GACTCGGATTCTGTGATGGAGCATCCCCAAACAGGGCAGCCACTGCAGCAGTCTGGAGAGGGCGGGAACTaGGGAGCAGAGGTGACCCCA | + |
|
Preference number: 5 (lower is better) Translates to: DSDSVMEHPQTGQPLQQSGEGGN*GAEVTP Trigger: TGGGGTCACCTCTGCTCCCAAGTTCCCGCCCTCTCC...AGACTGCTGCAGTGGCTGCCCTGTTTGGGGATGCTCCATCACAGAATCCGAGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| CDS CCA 90 bp | CGGGAGAGGACTGGGACCATGGCGATGCGCCCAGCTTGCTCAGGTTaGCCCTATAGGGTCCAGGAGGGGAGATATGGTTGGGATCTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: RERTGTMAMRPACSG*PYRVQEGRYGWDLK Trigger: TTTCAGATCCCAACCATATCTCCCCTCCTGGACCCTATAGGGCCAACCTGAGCAAGCTGGGCGCATCGCCATGGTCCCAGTCCTCTCCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029143.7 ENSMUST00000239423.2 |
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| CDS CCA 90 bp | GGTCAGTCGCTTCTCATCTGCAGAGCCTACTCCAGCCATGCGAACTaGGCTTGGTTCTGGGGGACAACTGGGTCCAGGTCCCTCACTCCT | + |
|
Preference number: 5 (lower is better) Translates to: GQSLLICRAYSSHAN*AWFWGTTGSRSLTP Trigger: AGGAGTGAGGGACCTGGACCCAGTTGTCCCCCAGAACCAAGCCCAGTTCGCATGGCTGGAGTAGGCTCTGCAGATGAGAAGCGACTGACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029143.7 ENSMUST00000239423.2 |
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| CDS-3UTR CAA 90 bp | GACTCGGATTCTGTGATGGAGCATCCCCAAACAGGGCAGCCACTGCAGCAGTCTCATCTGCCGCCAGTCTaGCAGCCTCGCTGTGCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: DSDSVMEHPQTGQPLQQSHLPPV*QPRCAG Trigger: TCCAGCACAGCGAGGCTGCAAGACTGGCGGCAGATG...AGACTGCTGCAGTGGCTGCCCTGTTTGGGGATGCTCCATCACAGAATCCGAGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| CDS GCA 90 bp | CATTGCTACTACCATTCTGATGGCCACTCACGGGAGCCCCTGGGATaGCCGGCTCAGGTTTCTGCCTGGCACCCTGCAGCTGATGATACT | + |
|
Preference number: 5 (lower is better) Translates to: HCYYHSDGHSREPLG*PAQVSAWHPAADDT Trigger: AGTATCATCAGCTGCAGGGTGCCAGGCAGAAACCTGAGCCGGGCATCCCAGGGGCTCCCGTGAGTGGCCATCAGAATGGTAGTAGCAATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029143.7 ENSMUST00000239423.2 |
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| CDS CCA 90 bp | TCGCTTCTCATCTGCAGAGCCTACTCCAGCCATGCGAACTGGGCTTaGTTCTGGGGGACAACTGGGTCCAGGTCCCTCACTCCTGAATGG | + |
|
Preference number: 5 (lower is better) Translates to: SLLICRAYSSHANWA*FWGTTGSRSLTPEW Trigger: CCATTCAGGAGTGAGGGACCTGGACCCAGTTGTCCCCCAGAACCAAGCCCAGTTCGCATGGCTGGAGTAGGCTCTGCAGATGAGAAGCGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029143.7 ENSMUST00000239423.2 |
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| CDS CCA 90 bp | GCCACCACCTGTTCACAGTCAATGATGACAAACTTCTCCAGGGCCTaGCCGGTGAATCGGCGACCTGCCTTGCTGCAGTACGTGTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: ATTCSQSMMTNFSRA*PVNRRPALLQYVSP Trigger: TGGAGACACGTACTGCAGCAAGGCAGGTCGCCGATTCACCGGCCAGGCCCTGGAGAAGTTTGTCATCATTGACTGTGAACAGGTGGTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029143.7 ENSMUST00000239423.2 |
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| CDS GCA 90 bp | AATGATGACAAACTTCTCCAGGGCCTGGCCGGTGAATCGGCGACCTaGCTTGCTGCAGTACGTGTCTCCACATGTGCTCCGTACACGCAT | + |
|
Preference number: 5 (lower is better) Translates to: NDDKLLQGLAGESAT*LAAVRVSTCAPYTH Trigger: ATGCGTGTACGGAGCACATGTGGAGACACGTACTGCAGCAAGGCAGGTCGCCGATTCACCGGCCAGGCCCTGGAGAAGTTTGTCATCATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029143.7 ENSMUST00000239423.2 |
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| CDS GCA 90 bp | CATCGGAACTCCCGATCAAAGTCTTCCACAATGTGGCCCCTCAGCTaGAGTACCATGCTGGTGTGGGCCTGGCTGCATAGCCAAGTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: HRNSRSKSSTMWPLS*STMLVWAWLHSQVK Trigger: CTTCACTTGGCTATGCAGCCAGGCCCACACCAGCATGGTACTGCAGCTGAGGGGCCACATTGTGGAAGACTTTGATCGGGAGTTCCGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029143.7 ENSMUST00000239423.2 |
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| CDS CCA 90 bp | TCCGCATACAGACATCGGAACTCCCGATCAAAGTCTTCCACAATGTaGCCCCTCAGCTGCAGTACCATGCTGGTGTGGGCCTGGCTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: SAYRHRNSRSKSSTM*PLSCSTMLVWAWLH Trigger: ATGCAGCCAGGCCCACACCAGCATGGTACTGCAGCTGAGGGGCCACATTGTGGAAGACTTTGATCGGGAGTTCCGATGTCTGTATGCGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029143.7 ENSMUST00000239423.2 |
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| CDS CCA 90 bp | GCTTGCTCAGGTTGGCCCTATAGGGTCCAGGAGGGGAGATATGGTTaGGATCTGAAAGTTGACGATACAGGGATGGCTGGCCACCAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: ACSGWPYRVQEGRYG*DLKVDDTGMAGHQL Trigger: AAGCTGGTGGCCAGCCATCCCTGTATCGTCAACTTTCAGATCCCAACCATATCTCCCCTCCTGGACCCTATAGGGCCAACCTGAGCAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029143.7 ENSMUST00000239423.2 |
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| CDS CCA 90 bp | CCCGCTTTAGAGAAGGGGCTGAGGCGATCCAGGTGGTCATGGCTTTaGCTCAGGGATACTTTCTTCTCTTCCACTGTCTCCAGAGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: PALEKGLRRSRWSWL*LRDTFFSSTVSRAV Trigger: CACAGCTCTGGAGACAGTGGAAGAGAAGAAAGTATCCCTGAGCCAAAGCCATGACCACCTGGATCGCCTCAGCCCCTTCTCTAAAGCGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029143.7 ENSMUST00000239423.2 |
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| CDS TCA 90 bp | GGGCATCAGTGGATCCTCATTGCTACAGAAGCCCTCCACAGGCTGTaGCTCCGCATACAGACATCGGAACTCCCGATCAAAGTCTTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: GHQWILIATEALHRL*LRIQTSELPIKVFH Trigger: GTGGAAGACTTTGATCGGGAGTTCCGATGTCTGTATGCGGAGTCACAGCCTGTGGAGGGCTTCTGTAGCAATGAGGATCCACTGATGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029143.7 ENSMUST00000239423.2 |
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| CDS TCA 90 bp | CAGGTTGGCCCTATAGGGTCCAGGAGGGGAGATATGGTTGGGATCTaGAAGTTGACGATACAGGGATGGCTGGCCACCAGCTTCATGGTA | + |
|
Preference number: 5 (lower is better) Translates to: QVGPIGSRRGDMVGI*KLTIQGWLATSFMV Trigger: TACCATGAAGCTGGTGGCCAGCCATCCCTGTATCGTCAACTTTCAGATCCCAACCATATCTCCCCTCCTGGACCCTATAGGGCCAACCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029143.7 ENSMUST00000239423.2 |
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| CDS TCA 90 bp | GGTTTAGGGACAGCTTCCTGTTCTCTAGACTCAGCTCACCAGGTCTaGGGGAACCTGACTCAAGAACACCCTGACCCTGGGACAGGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: GLGTASCSLDSAHQV*GNLTQEHPDPGTGD Trigger: ATCTCCTGTCCCAGGGTCAGGGTGTTCTTGAGTCAGGTTCCCTCAGACCTGGTGAGCTGAGTCTAGAGAACAGGAAGCTGTCCCTAAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029143.7 ENSMUST00000239423.2 |
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| CDS CCA 90 bp | GCTTCTCCCGCTTTAGAGAAGGGGCTGAGGCGATCCAGGTGGTCATaGCTTTGGCTCAGGGATACTTTCTTCTCTTCCACTGTCTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: ASPALEKGLRRSRWS*LWLRDTFFSSTVSR Trigger: TCTGGAGACAGTGGAAGAGAAGAAAGTATCCCTGAGCCAAAGCCATGACCACCTGGATCGCCTCAGCCCCTTCTCTAAAGCGGGAGAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029143.7 ENSMUST00000239423.2 |
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| CDS CCA 90 bp | CTAAATGTGCGTATCCACCTAGAGCCCAACCCACCCGAGGCTCCATaGTTTGCATCTGGGTTGGCTGCTATAAGGAAGAAGATACTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: LNVRIHLEPNPPEAP*FASGLAAIRKKILA Trigger: CGCCAGTATCTTCTTCCTTATAGCAGCCAACCCAGATGCAAACCATGGAGCCTCGGGTGGGTTGGGCTCTAGGTGGATACGCACATTTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239423.2 |
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| CDS-3UTR CAA 90 bp | CCAGATCCGCTCATTGAGCCCCACACCACTCTCTGGCTTACTCTACCAAGAACTAATCGCAGCAGGTCCTaGATGCTCTTGCCCTTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: PDPLIEPHTTLWLTLPRTNRSRS*MLLPLS Trigger: AGACAAGGGCAAGAGCATCAAGGACCTGCTGCGATT...AGTTCTTGGTAGAGTAAGCCAGAGAGTGGTGTGGGGCTCAATGAGCGGATCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| CDS-3UTR CAA 90 bp | CCGAGCTTCCAGAGACATTCAGCAAGGTGGTCTGTGTGTTTGTGTCTAAGTGTTCACAGCCACCACCGTTaGGGCCTGGCTGAAGAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: PSFQRHSARWSVCLCLSVHSHHR*GLAEEE Trigger: TTCCTCTTCAGCCAGGCCCAAACGGTGGTGGCTGTG...AACACTTAGACACAAACACACAGACCACCTTGCTGAATGTCTCTGGAAGCTCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| CDS-3UTR CAA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAAAGAGTCTTGAGACCAGGAAGTAGGAGCCTGTGGCGCTaGGAACTGCAGGTCCAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: VCVCVCVCVCKRVLRPGSRSLWR*ELQVQR Trigger: CCTTTGGACCTGCAGTTCCAAGCGCCACAGGCTCCT...ACTTCCTGGTCTCAAGACTCTTTTACACACACACACACACACACACACACACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| CDS-3UTR CAA 90 bp | TGTGTGTGTGTGTGTGTGTGTAAAAGAGTCTTGAGACCAGGAAGTTTTTGGCCTCCCATACCCATGTCATaGCGGCCACCACCTCCGGGT | + |
|
Preference number: 5 (lower is better) Translates to: CVCVCVCKRVLRPGSFWPPIPMS*RPPPPG Trigger: ACCCGGAGGTGGTGGCCGCAATGACATGGGTATGGG...AGGCCAAAAACTTCCTGGTCTCAAGACTCTTTTACACACACACACACACACACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| CDS-3UTR CAA 90 bp | CCGAGCTTCCAGAGACATTCAGCAAGGTGGTCTGTGTGTTTGTGTCTAAGTGTTTGGAAGGCTAGGGTCTaGGCTTGCTGGGAGCCCATT | + |
|
Preference number: 5 (lower is better) Translates to: PSFQRHSARWSVCLCLSVWKARV*ACWEPI Trigger: AATGGGCTCCCAGCAAGCCAAGACCCTAGCCTTCCA...AACACTTAGACACAAACACACAGACCACCTTGCTGAATGTCTCTGGAAGCTCGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| CDS-3UTR CAA 90 bp | TGTGTGTGTGTGTGTGTGTGTAAAAGAGTCTTGAGACCAGGAAGTTTTTGGCCTTTAGGAGCCTGGGGCTaGGGGTTCTGTGGCAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: CVCVCVCKRVLRPGSFWPLGAWG*GFCGRR Trigger: CCTCCTGCCACAGAACCCCAAGCCCCAGGCTCCTAA...AGGCCAAAAACTTCCTGGTCTCAAGACTCTTTTACACACACACACACACACACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| CDS TCA 90 bp | CTCCACATGTGCTCCGTACACGCATATTCACCAGGTGGCCCCCATTaGGGTCCATCTTATAACACATCTCCAGGAAGTACTTCAGGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: LHMCSVHAYSPGGPH*GPSYNTSPGSTSGA Trigger: AGCACCTGAAGTACTTCCTGGAGATGTGTTATAAGATGGACCTCAATGGGGGCCACCTGGTGAATATGCGTGTACGGAGCACATGTGGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029143.7 ENSMUST00000239423.2 |
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| CDS-3UTR CAA 90 bp | TGTCACTTGATTGGATCTTCCTCCAAATTAACCATCCAAGCTCTGGACTTCAGTGGGGTGACCCTAGAGTaGGGACCTCCTGCTTCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: CHLIGSSSKLTIQALDFSGVTLE*GPPASP Trigger: GGGAGAAGCAGGAGGTCCCAACTCTAGGGTCACCCC...ACTGAAGTCCAGAGCTTGGATGGTTAATTTGGAGGAAGATCCAATCAAGTGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| CDS-3UTR CAA 90 bp | TGGCTTACTCTACCAAGAACTCTTAACTCTCCTCCACCTGGCTCTCCCCCTGTCCGGAGCTGCTTGAATTaGGACTTGTTGTATTTAGTG | + |
|
Preference number: 5 (lower is better) Translates to: WLTLPRTLNSPPPGSPPVRSCLN*DLLYLV Trigger: CACTAAATACAACAAGTCCAAATTCAAGCAGCTCCG...GACAGGGGGAGAGCCAGGTGGAGGAGAGTTAAGAGTTCTTGGTAGAGTAAGCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| CDS-3UTR CAA 90 bp | AGCTTCCAGAGACATTCAGCAAGGTGGTCTGTGTGTTTGTGTCTAAGTGTTCAAAGAAGAGGGGAGTGCTaGATGCTGCTGAGGCTGTTA | + |
|
Preference number: 5 (lower is better) Translates to: SFQRHSARWSVCLCLSVQRRGEC*MLLRLL Trigger: TAACAGCCTCAGCAGCATCAAGCACTCCCCTCTTCT...TTGAACACTTAGACACAAACACACAGACCACCTTGCTGAATGTCTCTGGAAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| CDS-3UTR CAA 90 bp | TGTGTGTGTGTGTGTGTGTGTAAAAGAGTCTTGAGACCAGGAAGTTTTTGGCCTATCAGTGGATCCTCATaGCTACAGAAGCCCTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: CVCVCVCKRVLRPGSFWPISGSS*LQKPST Trigger: TGTGGAGGGCTTCTGTAGCAATGAGGATCCACTGAT...AGGCCAAAAACTTCCTGGTCTCAAGACTCTTTTACACACACACACACACACACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| CDS-3UTR CAA 90 bp | TGTGTGTGTGTGTGTGTGTGTAAAAGAGTCTTGAGACCAGGAAGTTTTTGGCCTCAGGTGGTCATGGCTTaGGCTCAGGGATACTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: CVCVCVCKRVLRPGSFWPQVVMA*AQGYFL Trigger: AAGAAAGTATCCCTGAGCCAAAGCCATGACCACCTG...AGGCCAAAAACTTCCTGGTCTCAAGACTCTTTTACACACACACACACACACACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| CDS-3UTR CAA 90 bp | GTGGTCTGTGTGTTTGTGTCTAAGTGTTCAACTACGTGCTCTGCTTATCTCCCCTTGAATTTGGACTTGTaGTATTTAGTGATGAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: VVCVFVSKCSTTCSAYLPLNLDL*YLVMRS Trigger: GGACCTCATCACTAAATACAACAAGTCCAAATTCAA...GGGGAGATAAGCAGAGCACGTAGTTGAACACTTAGACACAAACACACAGACCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| CDS-3UTR CAA 90 bp | CCGAGCTTCCAGAGACATTCAGCAAGGTGGTCTGTGTGTTTGTGTCTAAGTGTTTGCTTGAATTTGGACTaGTTGTATTTAGTGATGAGG | + |
|
Preference number: 5 (lower is better) Translates to: PSFQRHSARWSVCLCLSVCLNLD*LYLVMR Trigger: CCTCATCACTAAATACAACAAGTCCAAATTCAAGCA...AACACTTAGACACAAACACACAGACCACCTTGCTGAATGTCTCTGGAAGCTCGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
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| CDS-3UTR CAA 90 bp | GTACATAGAAACACAGGAACTGCAGATTCTATGTGTTGTGTCTGGGCAAACAAACGACTTCGGAGCTGCTaGAATTTGGACTTGTTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: VHRNTGTADSMCCVWANKRLRSC*NLDLLY Trigger: ATACAACAAGTCCAAATTCAAGCAGCTCCGAAGTCG...TTTGTTTGCCCAGACACAACACATAGAATCTGCAGTTCCTGTGTTTCTATGTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029143.7 |
||
| CDS CAA 90 bp | GGTAGGCAGCCTCTCCCCGTTCCAGGAGGGCATCTGCCGCCAGTCTaGCAGCCTCGCTGTGCTGGAGCACCAGGGGTGAGCTCTCCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: GRQPLPVPGGHLPPV*QPRCAGAPGVSSPS Trigger: GGAGGGAGAGCTCACCCCTGGTGCTCCAGCACAGCGAGGCTGCAAGACTGGCGGCAGATGCCCTCCTGGAACGGGGAGAGGCTGCCTACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029143.7 ENSMUST00000239423.2 |
||
| CDS CCA 72 bp | AGGGCATCTGCCGCCAGTCTTGCAGCCTCGCTGTGCTaGAGCACCAGGGGTGAGCTCTCCCTCCACCAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: RASAASLAASLC*STRGELSLHQG Trigger: GCCCTGGTGGAGGGAGAGCTCACCCCTGGTGCTCCAGCACAGCGAGGCTGCAAGACTGGCGGCAGATGCCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029143.7 ENSMUST00000239423.2 |
||
| CDS CAA 72 bp | CCTCTCCCCGTTCCAGGAGGGCATCTGCCGCCAGTCTaGCAGCCTCGCTGTGCTGGAGCACCAGGGGTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: PLPVPGGHLPPV*QPRCAGAPGVS Trigger: GCTCACCCCTGGTGCTCCAGCACAGCGAGGCTGCAAGACTGGCGGCAGATGCCCTCCTGGAACGGGGAGAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029143.7 ENSMUST00000239423.2 |
||
| CDS GCA 72 bp | AGGAGGGCATCTGCCGCCAGTCTTGCAGCCTCGCTGTaGTGGAGCACCAGGGGTGAGCTCTCCCTCCACCAG | + |
|
Preference number: 6 (lower is better) Translates to: RRASAASLAASL*WSTRGELSLHQ Trigger: CTGGTGGAGGGAGAGCTCACCCCTGGTGCTCCAGCACAGCGAGGCTGCAAGACTGGCGGCAGATGCCCTCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029143.7 ENSMUST00000239423.2 |
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| CDS GCA 72 bp | AAGGTAGGCAGCCTCTCCCCGTTCCAGGAGGGCATCTaGCGCCAGTCTTGCAGCCTCGCTGTGCTGGAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: KVGSLSPFQEGI*RQSCSLAVLEH Trigger: GTGCTCCAGCACAGCGAGGCTGCAAGACTGGCGGCAGATGCCCTCCTGGAACGGGGAGAGGCTGCCTACCTT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029143.7 ENSMUST00000239423.2 |
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| CDS CCA 72 bp | CCAGGTACCCAACGGCCGCGTGGAAGGCTAGGGTCTTaGCTTGCTGGGAGCCCATTCTCTGGAAGCCGGGAC | + |
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Preference number: 6 (lower is better) Translates to: PGTQRPRGRLGS*LAGSPFSGSRD Trigger: GTCCCGGCTTCCAGAGAATGGGCTCCCAGCAAGCCAAGACCCTAGCCTTCCACGCGGCCGTTGGGTACCTGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029143.7 ENSMUST00000239423.2 |
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| CDS CAA 90 bp | CAGAGCTGTGCCAGGTACCCAACGGCCGCGTGGAAGGCTAGGGTCTaGGCTTGCTGGGAGCCCATTCTCTGGAAGCCGGGACAGTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: QSCARYPTAAWKARV*ACWEPILWKPGQCW Trigger: CCAGCACTGTCCCGGCTTCCAGAGAATGGGCTCCCAGCAAGCCAAGACCCTAGCCTTCCACGCGGCCGTTGGGTACCTGGCACAGCTCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029143.7 ENSMUST00000239423.2 |
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| CDS TCA 72 bp | GGGCACTCAGGAAGGGCAGCTCCCGCTCTTCGGAGATaGCCTGAAGGTAGGCAGCCTCTCCCCGTTCCAGGA | + |
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Preference number: 6 (lower is better) Translates to: GHSGRAAPALRR*PEGRQPLPVPG Trigger: TCCTGGAACGGGGAGAGGCTGCCTACCTTCAGGTCATCTCCGAAGAGCGGGAGCTGCCCTTCCTGAGTGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029143.7 ENSMUST00000239423.2 |
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| CDS TCA 72 bp | CCACTGCCAGGGTCAAAGGACTGGTACTGCTGTGGTTaGGGGCGGGAGAGGACTGGGACCATGGCGATGCGC | + |
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Preference number: 6 (lower is better) Translates to: PLPGSKDWYCCG*GRERTGTMAMR Trigger: GCGCATCGCCATGGTCCCAGTCCTCTCCCGCCCTCAACCACAGCAGTACCAGTCCTTTGACCCTGGCAGTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029143.7 ENSMUST00000239423.2 |
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| CDS GCA 72 bp | TACCATTCTGATGGCCACTCACGGGAGCCCCTGGGATaGCCGGCTCAGGTTTCTGCCTGGCACCCTGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: YHSDGHSREPLG*PAQVSAWHPAA Trigger: AGCTGCAGGGTGCCAGGCAGAAACCTGAGCCGGGCATCCCAGGGGCTCCCGTGAGTGGCCATCAGAATGGTA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029143.7 ENSMUST00000239423.2 |
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| CDS CCA 72 bp | GGACTGGTACTGCTGTGGTTGAGGGCGGGAGAGGACTaGGACCATGGCGATGCGCCCAGCTTGCTCAGGTTG | + |
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Preference number: 6 (lower is better) Translates to: GLVLLWLRAGED*DHGDAPSLLRL Trigger: CAACCTGAGCAAGCTGGGCGCATCGCCATGGTCCCAGTCCTCTCCCGCCCTCAACCACAGCAGTACCAGTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029143.7 ENSMUST00000239423.2 |
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| CDS CAA 72 bp | CCCACTGCCAGGGTCAAAGGACTGGTACTGCTGTGGTaGAGGGCGGGAGAGGACTGGGACCATGGCGATGCG | + |
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Preference number: 6 (lower is better) Translates to: PTARVKGLVLLW*RAGEDWDHGDA Trigger: CGCATCGCCATGGTCCCAGTCCTCTCCCGCCCTCAACCACAGCAGTACCAGTCCTTTGACCCTGGCAGTGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029143.7 ENSMUST00000239423.2 |
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| CDS CAA 90 bp | AGAGGTGACCCCACTGCCAGGGTCAAAGGACTGGTACTGCTGTGGTaGAGGGCGGGAGAGGACTGGGACCATGGCGATGCGCCCAGCTTG | + |
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Preference number: 6 (lower is better) Translates to: RGDPTARVKGLVLLW*RAGEDWDHGDAPSL Trigger: CAAGCTGGGCGCATCGCCATGGTCCCAGTCCTCTCCCGCCCTCAACCACAGCAGTACCAGTCCTTTGACCCTGGCAGTGGGGTCACCTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029143.7 ENSMUST00000239423.2 |
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| CDS CCA 72 bp | GAGCCAGAAGGAGATAGACAGGGACGCCACGTCGGCTaGAGGCCTCCATCAGGTCGCACAGGAGCTCCATGT | + |
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Preference number: 6 (lower is better) Translates to: EPEGDRQGRHVG*RPPSGRTGAPC Trigger: ACATGGAGCTCCTGTGCGACCTGATGGAGGCCTCCAGCCGACGTGGCGTCCCTGTCTATCTCCTTCTGGCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029143.7 ENSMUST00000239423.2 |
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| CDS CCA 72 bp | ACTGCTGTGGTTGAGGGCGGGAGAGGACTGGGACCATaGCGATGCGCCCAGCTTGCTCAGGTTGGCCCTATA | + |
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Preference number: 6 (lower is better) Translates to: TAVVEGGRGLGP*RCAQLAQVGPI Trigger: TATAGGGCCAACCTGAGCAAGCTGGGCGCATCGCCATGGTCCCAGTCCTCTCCCGCCCTCAACCACAGCAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029143.7 ENSMUST00000239423.2 |
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| CDS CCA 72 bp | GACCCCACTGCCAGGGTCAAAGGACTGGTACTGCTGTaGTTGAGGGCGGGAGAGGACTGGGACCATGGCGAT | + |
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Preference number: 6 (lower is better) Translates to: DPTARVKGLVLL*LRAGEDWDHGD Trigger: ATCGCCATGGTCCCAGTCCTCTCCCGCCCTCAACCACAGCAGTACCAGTCCTTTGACCCTGGCAGTGGGGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029143.7 ENSMUST00000239423.2 |
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| CDS CCA 72 bp | TGTCTCCAGAGCTGTGCCAGGTACCCAACGGCCGCGTaGAAGGCTAGGGTCTTGGCTTGCTGGGAGCCCATT | + |
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Preference number: 6 (lower is better) Translates to: CLQSCARYPTAA*KARVLACWEPI Trigger: AATGGGCTCCCAGCAAGCCAAGACCCTAGCCTTCCACGCGGCCGTTGGGTACCTGGCACAGCTCTGGAGACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029143.7 ENSMUST00000239423.2 |
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| CDS CAA 72 bp | GGAGGGCGAGGGACCTGGGGCATCAGTGGATCCTCATaGCTACAGAAGCCCTCCACAGGCTGTGACTCCGCA | + |
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Preference number: 6 (lower is better) Translates to: GGRGTWGISGSS*LQKPSTGCDSA Trigger: TGCGGAGTCACAGCCTGTGGAGGGCTTCTGTAGCAATGAGGATCCACTGATGCCCCAGGTCCCTCGCCCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029143.7 ENSMUST00000239423.2 |
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| CDS GCA 72 bp | AAACTTCTCCAGGGCCTGGCCGGTGAATCGGCGACCTaGCTTGCTGCAGTACGTGTCTCCACATGTGCTCCG | + |
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Preference number: 6 (lower is better) Translates to: KLLQGLAGESAT*LAAVRVSTCAP Trigger: CGGAGCACATGTGGAGACACGTACTGCAGCAAGGCAGGTCGCCGATTCACCGGCCAGGCCCTGGAGAAGTTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029143.7 ENSMUST00000239423.2 |
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| CDS GCA 72 bp | GAGGGCGAGGGACCTGGGGCATCAGTGGATCCTCATTaGTACAGAAGCCCTCCACAGGCTGTGACTCCGCAT | + |
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Preference number: 6 (lower is better) Translates to: EGEGPGASVDPH*YRSPPQAVTPH Trigger: ATGCGGAGTCACAGCCTGTGGAGGGCTTCTGTAGCAATGAGGATCCACTGATGCCCCAGGTCCCTCGCCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029143.7 ENSMUST00000239423.2 |
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| CDS CCA 72 bp | ACTGGGACCATGGCGATGCGCCCAGCTTGCTCAGGTTaGCCCTATAGGGTCCAGGAGGGGAGATATGGTTGG | + |
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Preference number: 6 (lower is better) Translates to: TGTMAMRPACSG*PYRVQEGRYGW Trigger: CCAACCATATCTCCCCTCCTGGACCCTATAGGGCCAACCTGAGCAAGCTGGGCGCATCGCCATGGTCCCAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029143.7 ENSMUST00000239423.2 |
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| CDS CAA 72 bp | TTCTCCAGGGCCTGGCCGGTGAATCGGCGACCTGCCTaGCTGCAGTACGTGTCTCCACATGTGCTCCGTACA | + |
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Preference number: 6 (lower is better) Translates to: FSRAWPVNRRPA*LQYVSPHVLRT Trigger: TGTACGGAGCACATGTGGAGACACGTACTGCAGCAAGGCAGGTCGCCGATTCACCGGCCAGGCCCTGGAGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029143.7 ENSMUST00000239423.2 |
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| CDS GCA 72 bp | GGCGACCTGCCTTGCTGCAGTACGTGTCTCCACATGTaGTCCGTACACGCATATTCACCAGGTGGCCCCCAT | + |
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Preference number: 6 (lower is better) Translates to: GDLPCCSTCLHM*SVHAYSPGGPH Trigger: ATGGGGGCCACCTGGTGAATATGCGTGTACGGAGCACATGTGGAGACACGTACTGCAGCAAGGCAGGTCGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029143.7 ENSMUST00000239423.2 |
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| CDS CCA 72 bp | ATCTGCAGAGCCTACTCCAGCCATGCGAACTGGGCTTaGTTCTGGGGGACAACTGGGTCCAGGTCCCTCACT | + |
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Preference number: 6 (lower is better) Translates to: ICRAYSSHANWA*FWGTTGSRSLT Trigger: AGTGAGGGACCTGGACCCAGTTGTCCCCCAGAACCAAGCCCAGTTCGCATGGCTGGAGTAGGCTCTGCAGAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029143.7 ENSMUST00000239423.2 |
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| CDS CCA 72 bp | CTTCTCATCTGCAGAGCCTACTCCAGCCATGCGAACTaGGCTTGGTTCTGGGGGACAACTGGGTCCAGGTCC | + |
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Preference number: 6 (lower is better) Translates to: LLICRAYSSHAN*AWFWGTTGSRS Trigger: GGACCTGGACCCAGTTGTCCCCCAGAACCAAGCCCAGTTCGCATGGCTGGAGTAGGCTCTGCAGATGAGAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029143.7 ENSMUST00000239423.2 |
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| CDS CAA 72 bp | GACTGTGACCTAGGGTCTGCCGTCGGTCATCTAGACTaGGCTTGCTGGGCCCGGCAGAAGAATAGGCATCGG | + |
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Preference number: 6 (lower is better) Translates to: DCDLGSAVGHLD*ACWARQKNRHR Trigger: CCGATGCCTATTCTTCTGCCGGGCCCAGCAAGCCAAGTCTAGATGACCGACGGCAGACCCTAGGTCACAGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029143.7 ENSMUST00000239423.2 |
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| CDS CAA 90 bp | ATGACAAACTTCTCCAGGGCCTGGCCGGTGAATCGGCGACCTGCCTaGCTGCAGTACGTGTCTCCACATGTGCTCCGTACACGCATATTC | + |
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Preference number: 6 (lower is better) Translates to: MTNFSRAWPVNRRPA*LQYVSPHVLRTRIF Trigger: GAATATGCGTGTACGGAGCACATGTGGAGACACGTACTGCAGCAAGGCAGGTCGCCGATTCACCGGCCAGGCCCTGGAGAAGTTTGTCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029143.7 ENSMUST00000239423.2 |
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| CDS CAA 90 bp | GGTCCAATTGACTGTGACCTAGGGTCTGCCGTCGGTCATCTAGACTaGGCTTGCTGGGCCCGGCAGAAGAATAGGCATCGGAGGGTATCT | + |
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Preference number: 6 (lower is better) Translates to: GPIDCDLGSAVGHLD*ACWARQKNRHRRVS Trigger: AGATACCCTCCGATGCCTATTCTTCTGCCGGGCCCAGCAAGCCAAGTCTAGATGACCGACGGCAGACCCTAGGTCACAGTCAATTGGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029143.7 ENSMUST00000239423.2 |
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| CDS TCA 72 bp | TGTCTCTTTGAAAATGAACCACCGCCTGAGTGGGACTaGAACCTGTGGCCTGGGGCACTTCAGGCCAGCCCA | + |
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Preference number: 6 (lower is better) Translates to: CLFENEPPPEWD*NLWPGALQASP Trigger: TGGGCTGGCCTGAAGTGCCCCAGGCCACAGGTTTCAGTCCCACTCAGGCGGTGGTTCATTTTCAAAGAGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029143.7 ENSMUST00000239423.2 |
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| CDS CCA 72 bp | AAAACGTCCATCACCACAGCCACCACCGTTTGGGCCTaGCTGAAGAGGAATCGCAGCAGGTCCTTGATGCTC | + |
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Preference number: 6 (lower is better) Translates to: KTSITTATTVWA*LKRNRSRSLML Trigger: GAGCATCAAGGACCTGCTGCGATTCCTCTTCAGCCAGGCCCAAACGGTGGTGGCTGTGGTGATGGACGTTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029143.7 ENSMUST00000239423.2 |
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| CDS TCA 72 bp | GGTCCAGGAGGGGAGATATGGTTGGGATCTGAAAGTTaGCGATACAGGGATGGCTGGCCACCAGCTTCATGG | + |
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Preference number: 6 (lower is better) Translates to: GPGGEIWLGSES*RYRDGWPPASW Trigger: CCATGAAGCTGGTGGCCAGCCATCCCTGTATCGTCAACTTTCAGATCCCAACCATATCTCCCCTCCTGGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029143.7 ENSMUST00000239423.2 |
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| CDS TCA 72 bp | ACAGCTTCCTGTTCTCTAGACTCAGCTCACCAGGTCTaGGGGAACCTGACTCAAGAACACCCTGACCCTGGG | + |
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Preference number: 6 (lower is better) Translates to: TASCSLDSAHQV*GNLTQEHPDPG Trigger: CCCAGGGTCAGGGTGTTCTTGAGTCAGGTTCCCTCAGACCTGGTGAGCTGAGTCTAGAGAACAGGAAGCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029143.7 ENSMUST00000239423.2 |
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| CDS CCA 72 bp | GGTTGGCCCTATAGGGTCCAGGAGGGGAGATATGGTTaGGATCTGAAAGTTGACGATACAGGGATGGCTGGC | + |
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Preference number: 6 (lower is better) Translates to: GWPYRVQEGRYG*DLKVDDTGMAG Trigger: GCCAGCCATCCCTGTATCGTCAACTTTCAGATCCCAACCATATCTCCCCTCCTGGACCCTATAGGGCCAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029143.7 ENSMUST00000239423.2 |
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| CDS CCA 72 bp | GAGAAGGGGCTGAGGCGATCCAGGTGGTCATGGCTTTaGCTCAGGGATACTTTCTTCTCTTCCACTGTCTCC | + |
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Preference number: 6 (lower is better) Translates to: EKGLRRSRWSWL*LRDTFFSSTVS Trigger: GGAGACAGTGGAAGAGAAGAAAGTATCCCTGAGCCAAAGCCATGACCACCTGGATCGCCTCAGCCCCTTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029143.7 ENSMUST00000239423.2 |
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| CDS CCA 72 bp | CGTATCCACCTAGAGCCCAACCCACCCGAGGCTCCATaGTTTGCATCTGGGTTGGCTGCTATAAGGAAGAAG | + |
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Preference number: 6 (lower is better) Translates to: RIHLEPNPPEAP*FASGLAAIRKK Trigger: CTTCTTCCTTATAGCAGCCAACCCAGATGCAAACCATGGAGCCTCGGGTGGGTTGGGCTCTAGGTGGATACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239423.2 |
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| CDS TCA 72 bp | GACAATCTCCTGTCATCTAGAGCCAGCTCACGGTGCTaGAGGGAACTTGAATCGGGGGTGACCCTAGAGTTG | + |
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Preference number: 6 (lower is better) Translates to: DNLLSSRASSRC*RELESGVTLEL Trigger: CAACTCTAGGGTCACCCCCGATTCAAGTTCCCTTCAGCACCGTGAGCTGGCTCTAGATGACAGGAGATTGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029143.7 ENSMUST00000239423.2 |
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| CDS GCA 72 bp | CCACCTAGAGCCCAACCCACCCGAGGCTCCATGGTTTaGATCTGGGTTGGCTGCTATAAGGAAGAAGATACT | + |
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Preference number: 6 (lower is better) Translates to: PPRAQPTRGSMV*IWVGCYKEEDT Trigger: AGTATCTTCTTCCTTATAGCAGCCAACCCAGATGCAAACCATGGAGCCTCGGGTGGGTTGGGCTCTAGGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239423.2 |
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| CDS TCA 72 bp | TGGATCCTCATTGCTACAGAAGCCCTCCACAGGCTGTaGCTCCGCATACAGACATCGGAACTCCCGATCAAA | + |
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Preference number: 6 (lower is better) Translates to: WILIATEALHRL*LRIQTSELPIK Trigger: TTTGATCGGGAGTTCCGATGTCTGTATGCGGAGTCACAGCCTGTGGAGGGCTTCTGTAGCAATGAGGATCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029143.7 ENSMUST00000239423.2 |
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| CDS CCA 72 bp | GCTTTAGAGAAGGGGCTGAGGCGATCCAGGTGGTCATaGCTTTGGCTCAGGGATACTTTCTTCTCTTCCACT | + |
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Preference number: 6 (lower is better) Translates to: ALEKGLRRSRWS*LWLRDTFFSST Trigger: AGTGGAAGAGAAGAAAGTATCCCTGAGCCAAAGCCATGACCACCTGGATCGCCTCAGCCCCTTCTCTAAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029143.7 ENSMUST00000239423.2 |
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| CDS TCA 72 bp | TGCTCCGTACACGCATATTCACCAGGTGGCCCCCATTaGGGTCCATCTTATAACACATCTCCAGGAAGTACT | + |
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Preference number: 6 (lower is better) Translates to: CSVHAYSPGGPH*GPSYNTSPGST Trigger: AGTACTTCCTGGAGATGTGTTATAAGATGGACCTCAATGGGGGCCACCTGGTGAATATGCGTGTACGGAGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029143.7 ENSMUST00000239423.2 |
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