Pregenerated sensors for FAM83A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051225Ensembl transcript IDs: ENSMUST00000050374.3, ENSMUST00000160942.8
Found 166 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTCAGGAAGGGGCCACATTTCTCACTTCTGGCTTCGTTTATTTGGTaGGCTCTAGCTGTGGCCAGAAAGAAGAGCTGGGAGCTCTGGGGG | + |
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Preference number: 1 (lower is better) Translates to: VRKGPHFSLLASFIW*ALAVARKKSWELWG Trigger: CCCCCAGAGCTCCCAGCTCTTCTTTCTGGCCACAGCTAGAGCTCACCAAATAAACGAAGCCAGAAGTGAGAAATGTGGCCCCTTCCTGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050374.3 |
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| 3UTR CCA 90 bp | GTTCTCTTAAGCAAGAGCCAGAGTCTGCTAAAGAGCCTCATGGGATaGAAACTTCCAGCCTCCTCAGGCTGTCCCATCCCTGTAGGCAGC | + |
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Preference number: 1 (lower is better) Translates to: VLLSKSQSLLKSLMG*KLPASSGCPIPVGS Trigger: GCTGCCTACAGGGATGGGACAGCCTGAGGAGGCTGGAAGTTTCCATCCCATGAGGCTCTTTAGCAGACTCTGGCTCTTGCTTAAGAGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
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| 3UTR GCA 90 bp | AGGAGGTCAGATCTCATTACAGATGGTTGTGAGCCACCATGTGGTTaGTGGGAATTGAACTCAGGATCTCCGGAAGAGCAGTCGGTGCTC | + |
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Preference number: 1 (lower is better) Translates to: RRSDLITDGCEPPCG*WELNSGSPEEQSVL Trigger: GAGCACCGACTGCTCTTCCGGAGATCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGAGATCTGACCTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
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| 3UTR TCA 90 bp | GGGGAGGAGCATTTCCTACCAGAAACATCCAGAATTCTGAATCTCTaGGGAAGAGAATGGAGCCTGCTTATAAAGCTTAGACTGCATTTT | + |
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Preference number: 1 (lower is better) Translates to: GEEHFLPETSRILNL*GREWSLLIKLRLHF Trigger: AAAATGCAGTCTAAGCTTTATAAGCAGGCTCCATTCTCTTCCTCAGAGATTCAGAATTCTGGATGTTTCTGGTAGGAAATGCTCCTCCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
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| 3UTR CAA 90 bp | CAGTGTCAGGAAGGGGCCACATTTCTCACTTCTGGCTTCGTTTATTaGGTGAGCTCTAGCTGTGGCCAGAAAGAAGAGCTGGGAGCTCTG | + |
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Preference number: 2 (lower is better) Translates to: QCQEGATFLTSGFVY*VSSSCGQKEELGAL Trigger: CAGAGCTCCCAGCTCTTCTTTCTGGCCACAGCTAGAGCTCACCAAATAAACGAAGCCAGAAGTGAGAAATGTGGCCCCTTCCTGACACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050374.3 |
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| 3UTR-3UTR TCA 90 bp | GAGGCCGGAGAGAGTAGAAAGAAGTCTCTGTCCAATTTCAGTGTCAGGAAGGGGGCTTCGTTTATTTGGTaGGCTCTAGCTGTGGCCAGA | + |
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Preference number: 2 (lower is better) Translates to: EAGESRKKSLSNFSVRKGASFIW*ALAVAR Trigger: TCTGGCCACAGCTAGAGCTCACCAAATAAACGAAGC...CCCCTTCCTGACACTGAAATTGGACAGAGACTTCTTTCTACTCTCTCCGGCCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050374.3 |
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| 3UTR-3UTR GCA 90 bp | ATTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATTGAACTCAGGATCTCAGGAAATTCTGCAGTaGTCAGTCCTTCCCCCACCC | + |
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Preference number: 2 (lower is better) Translates to: ITDGCEPPCGCWELNSGSQEILQ*SVLPPP Trigger: GGGTGGGGGAAGGACTGAGCACTGCAGAATTTCCTG...AGATCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCTGTAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
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| 3UTR-3UTR GCA 90 bp | TTCAGACACTCCAGAAGAGGAGGTCAGATCTCATTACAGATGGTTGTGAGCCACACAGCCAGGAAATTCTaGAGTGCTCAGTCCTTCCCC | + |
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Preference number: 2 (lower is better) Translates to: FRHSRRGGQISLQMVVSHTARKF*SAQSFP Trigger: GGGGAAGGACTGAGCACTGCAGAATTTCCTGGCTGT...GTGGCTCACAACCATCTGTAATGAGATCTGACCTCCTCTTCTGGAGTGTCTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
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| 3UTR-3UTR CCA 90 bp | CAATTTCAGTGTCAGGAAGGGGCCACATTTCTCACTTCTGGCTTCGTTTATTTGCACTGCCCGGAAGCCTaGACAGCAGATGAAACCAGT | + |
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Preference number: 2 (lower is better) Translates to: QFQCQEGATFLTSGFVYLHCPEA*TADETS Trigger: ACTGGTTTCATCTGCTGTCCAGGCTTCCGGGCAGTG...CAAATAAACGAAGCCAGAAGTGAGAAATGTGGCCCCTTCCTGACACTGAAATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050374.3 |
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| 3UTR-3UTR TCA 90 bp | CCACCATGTGGTTGCTGGGAATTGAACTCAGGATCTCCGGAAGAGCAGTCGGTGAAACATCCAGAATTCTaGATCTCTGAGGAAGAGAAT | + |
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Preference number: 2 (lower is better) Translates to: PPCGCWELNSGSPEEQSVKHPEF*ISEEEN Trigger: ATTCTCTTCCTCAGAGATTCAGAATTCTGGATGTTT...CACCGACTGCTCTTCCGGAGATCCTGAGTTCAATTCCCAGCAACCACATGGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
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| 3UTR-3UTR CCA 90 bp | AAAGTTAAAAGCAAATCTATTGTTTTATCACAATTCCTAAGAGGCCGGAGAGAGCACATTTCTCACTTCTaGCTTCGTTTATTTGGTGAG | + |
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Preference number: 2 (lower is better) Translates to: KVKSKSIVLSQFLRGRREHISHF*LRLFGE Trigger: CTCACCAAATAAACGAAGCCAGAAGTGAGAAATGTG...CTCTCTCCGGCCTCTTAGGAATTGTGATAAAACAATAGATTTGCTTTTAACTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050374.3 |
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| 3UTR CCA 72 bp | AGCAAGAGCCAGAGTCTGCTAAAGAGCCTCATGGGATaGAAACTTCCAGCCTCCTCAGGCTGTCCCATCCCT | + |
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Preference number: 3 (lower is better) Translates to: SKSQSLLKSLMG*KLPASSGCPIP Trigger: AGGGATGGGACAGCCTGAGGAGGCTGGAAGTTTCCATCCCATGAGGCTCTTTAGCAGACTCTGGCTCTTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
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| 3UTR TCA 72 bp | CAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATTaGACTCAGGATCTCCGGAAGAGCAGTCGGTGCTCT | + |
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Preference number: 3 (lower is better) Translates to: QMVVSHHVVAGN*TQDLRKSSRCS Trigger: AGAGCACCGACTGCTCTTCCGGAGATCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
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| 3UTR CCA 72 bp | AACGGCCTTTGGAAGACAGGGGTTCTTAGACACGTCTaGTCATTGAGGTCTCTCCCCTGTCTCACTGGAATC | + |
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Preference number: 3 (lower is better) Translates to: NGLWKTGVLRHV*SLRSLPCLTGI Trigger: GATTCCAGTGAGACAGGGGAGAGACCTCAATGACCAGACGTGTCTAAGAACCCCTGTCTTCCAAAGGCCGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
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| 3UTR CCA 72 bp | CTCATTACAGATGGTTGTGAGCCACCATGTGGTTGCTaGGAATTGAACTCAGGATCTCCGGAAGAGCAGTCG | + |
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Preference number: 3 (lower is better) Translates to: LITDGCEPPCGC*ELNSGSPEEQS Trigger: CGACTGCTCTTCCGGAGATCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
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| 3UTR TCA 72 bp | CCAGAAGAGGAGGTCAGATCTCATTACAGATGGTTGTaGGCCACCATGTGGTTGCTGGGAATTGAACTCAGG | + |
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Preference number: 3 (lower is better) Translates to: PEEEVRSHYRWL*ATMWLLGIELR Trigger: CCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGAGATCTGACCTCCTCTTCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
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| 3UTR GCA 72 bp | GATCTCATTACAGATGGTTGTGAGCCACCATGTGGTTaGTGGGAATTGAACTCAGGATCTCCGGAAGAGCAG | + |
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Preference number: 3 (lower is better) Translates to: DLITDGCEPPCG*WELNSGSPEEQ Trigger: CTGCTCTTCCGGAGATCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGAGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
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| CDS-3UTR CCA 90 bp | GGTGGGGTGGGAGCAGCCATCATCCAGCTGGTACCCCACTTAGCCCATCACTGCGGGGGCTCCTTGGCCTaGGCCTGGATGTACTGGGCC | + |
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Preference number: 4 (lower is better) Translates to: GGVGAAIIQLVPHLAHHCGGSLA*AWMYWA Trigger: GGCCCAGTACATCCAGGCCCAGGCCAAGGAGCCCCC...GCAGTGATGGGCTAAGTGGGGTACCAGCTGGATGATGGCTGCTCCCACCCCACC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000050374.3 |
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| CDS-3UTR TCA 90 bp | GGTGGGAGCAGCCATCATCCAGCTGGTACCCCACTTAGCCCATCACTGCCCGGACAGTCCTCTGGGTCCTaGCTCAGCCCCTCCGGCAGA | + |
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Preference number: 4 (lower is better) Translates to: GGSSHHPAGTPLSPSLPGQSSGS*LSPSGR Trigger: TCTGCCGGAGGGGCTGAGTCAGGACCCAGAGGACTG...TCCGGGCAGTGATGGGCTAAGTGGGGTACCAGCTGGATGATGGCTGCTCCCACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050374.3 |
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| CDS-3UTR GCA 90 bp | GGTGGGAGCAGCCATCATCCAGCTGGTACCCCACTTAGCCCATCACTGCCCGGAGGCTGGCCCGGGAGATaGAGCGGCGGACCAAATCTC | + |
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Preference number: 4 (lower is better) Translates to: GGSSHHPAGTPLSPSLPGGWPGR*SGGPNL Trigger: GAGATTTGGTCCGCCGCTGCATCTCCCGGGCCAGCC...TCCGGGCAGTGATGGGCTAAGTGGGGTACCAGCTGGATGATGGCTGCTCCCACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050374.3 |
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| CDS-3UTR CCA 90 bp | GGCAGGTGGCTGCCCTGGGCTTTGCTGAAGGCCATTCCTAGCCATGACAACTCAGGGGGCTCCTTGGCCTaGGCCTGGATGTACTGGGCC | + |
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Preference number: 4 (lower is better) Translates to: GRWLPWALLKAIPSHDNSGGSLA*AWMYWA Trigger: GGCCCAGTACATCCAGGCCCAGGCCAAGGAGCCCCC...TGAGTTGTCATGGCTAGGAATGGCCTTCAGCAAAGCCCAGGGCAGCCACCTGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
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| CDS-3UTR TCA 90 bp | GGCAGGTGGCTGCCCTGGGCTTTGCTGAAGGCCATTCCTAGCCATGACAACTCACAGTCCTCTGGGTCCTaGCTCAGCCCCTCCGGCAGA | + |
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Preference number: 4 (lower is better) Translates to: GRWLPWALLKAIPSHDNSQSSGS*LSPSGR Trigger: TCTGCCGGAGGGGCTGAGTCAGGACCCAGAGGACTG...TGAGTTGTCATGGCTAGGAATGGCCTTCAGCAAAGCCCAGGGCAGCCACCTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
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| CDS-3UTR GCA 90 bp | AAACTTCCAGCCTCCTCAGGCTGTCCCATCCCTGTAGGCAGCAGCTTCAGGTGGGGCTGGCCCGGGAGATaGAGCGGCGGACCAAATCTC | + |
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Preference number: 4 (lower is better) Translates to: KLPASSGCPIPVGSSFRWGWPGR*SGGPNL Trigger: GAGATTTGGTCCGCCGCTGCATCTCCCGGGCCAGCC...CCACCTGAAGCTGCTGCCTACAGGGATGGGACAGCCTGAGGAGGCTGGAAGTTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
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| CDS-3UTR GCA 90 bp | CTAAAGAGCCTCATGGGATGGAAACTTCCAGCCTCCTCAGGCTGTCCCATCCCTACCAGGCCGAGTTGCTaGAGCTGCAGCCGGGTGGGC | + |
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Preference number: 4 (lower is better) Translates to: LKSLMGWKLPASSGCPIPTRPSC*SCSRVG Trigger: GCCCACCCGGCTGCAGCTGCAGCAACTCGGCCTGGT...AGGGATGGGACAGCCTGAGGAGGCTGGAAGTTTCCATCCCATGAGGCTCTTTAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
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| CDS-3UTR GCA 90 bp | GCCACCATGTGGTTGCTGGGAATTGAACTCAGGATCTCCGGAAGAGCAGTCGGTGGCACCAGGCCGAGTTaGTGCAGCTGCAGCCGGGTG | + |
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Preference number: 4 (lower is better) Translates to: ATMWLLGIELRISGRAVGGTRPS*CSCSRV Trigger: CACCCGGCTGCAGCTGCAGCAACTCGGCCTGGTGCC...ACCGACTGCTCTTCCGGAGATCCTGAGTTCAATTCCCAGCAACCACATGGTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
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| CDS-3UTR CCA 90 bp | CAGCTGGTACCCCACTTAGCCCATCACTGCCCGGAAGCCTGGACAGCAGATGAACCAAGAGGGCATCTGTaGCCAGCCGGGCGCTCTCAT | + |
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Preference number: 4 (lower is better) Translates to: QLVPHLAHHCPEAWTADEPRGHL*PAGRSH Trigger: ATGAGAGCGCCCGGCTGGCCACAGATGCCCTCTTGG...TTCATCTGCTGTCCAGGCTTCCGGGCAGTGATGGGCTAAGTGGGGTACCAGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050374.3 |
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| CDS-3UTR CCA 90 bp | CCCACCCCAACCCCGACTCCCAGTGCTATTAGCTCACAGGGAACCAGGCTCAATGGGCCAGGGGACTGCTaGGCCCTGAAGATGTGGACA | + |
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Preference number: 4 (lower is better) Translates to: PTPTPTPSAISSQGTRLNGPGDC*ALKMWT Trigger: TGTCCACATCTTCAGGGCCCAGCAGTCCCCTGGCCC...ATTGAGCCTGGTTCCCTGTGAGCTAATAGCACTGGGAGTCGGGGTTGGGGTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
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| CDS-3UTR CCA 90 bp | CCACCATGTGGTTGCTGGGAATTGAACTCAGGATCTCCGGAAGAGCAGTCGGTGGCAGCCTTGGAACCGTaGGTGGGATGGGGGCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: PPCGCWELNSGSPEEQSVAALEP*VGWGPG Trigger: CCCTGGCCCCCATCCCACCCACGGTTCCAAGGCTGC...CACCGACTGCTCTTCCGGAGATCCTGAGTTCAATTCCCAGCAACCACATGGTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
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| CDS-3UTR GCA 90 bp | AAAGAGCCTCATGGGATGGAAACTTCCAGCCTCCTCAGGCTGTCCCATCCCTGTTGGGGGCCAGGGGACTaGTGGGCCCTGAAGATGTGG | + |
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Preference number: 4 (lower is better) Translates to: KEPHGMETSSLLRLSHPCWGPGD*WALKMW Trigger: CCACATCTTCAGGGCCCAGCAGTCCCCTGGCCCCCA...ACAGGGATGGGACAGCCTGAGGAGGCTGGAAGTTTCCATCCCATGAGGCTCTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
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| CDS-3UTR CCA 90 bp | GGCAGGTGGCTGCCCTGGGCTTTGCTGAAGGCCATTCCTAGCCATGACAACTCACATCAGGGGGCTCCTTaGCCTGGGCCTGGATGTACT | + |
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Preference number: 4 (lower is better) Translates to: GRWLPWALLKAIPSHDNSHQGAP*PGPGCT Trigger: AGTACATCCAGGCCCAGGCCAAGGAGCCCCCTGATG...TGAGTTGTCATGGCTAGGAATGGCCTTCAGCAAAGCCCAGGGCAGCCACCTGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
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| CDS-3UTR CCA 90 bp | AAACTTCCAGCCTCCTCAGGCTGTCCCATCCCTGTAGGCAGCAGCTTCAGGTGGAGGAGTCCAGTCCTCTaGGTCCTGACTCAGCCCCTC | + |
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Preference number: 4 (lower is better) Translates to: KLPASSGCPIPVGSSFRWRSPVL*VLTQPL Trigger: GAGGGGCTGAGTCAGGACCCAGAGGACTGGACTCCT...CCACCTGAAGCTGCTGCCTACAGGGATGGGACAGCCTGAGGAGGCTGGAAGTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
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| CDS-3UTR CCA 90 bp | CCCACCCCAACCCCGACTCCCAGTGCTATTAGCTCACAGGGAACCAGGCTCAATATAGGGCTGCAGCCTTaGAACCGTGGGTGGGATGGG | + |
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Preference number: 4 (lower is better) Translates to: PTPTPTPSAISSQGTRLNIGLQP*NRGWDG Trigger: CCCATCCCACCCACGGTTCCAAGGCTGCAGCCCTAT...ATTGAGCCTGGTTCCCTGTGAGCTAATAGCACTGGGAGTCGGGGTTGGGGTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
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| CDS-3UTR CCA 90 bp | AAAGAGCCTCATGGGATGGAAACTTCCAGCCTCCTCAGGCTGTCCCATCCCTGTGACCAAGAGAGGCTGTaGGGCCACGGCTCTCCGGGT | + |
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Preference number: 4 (lower is better) Translates to: KEPHGMETSSLLRLSHPCDQERL*GHGSPG Trigger: ACCCGGAGAGCCGTGGCCCCACAGCCTCTCTTGGTC...ACAGGGATGGGACAGCCTGAGGAGGCTGGAAGTTTCCATCCCATGAGGCTCTTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
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| CDS-3UTR CCA 90 bp | AAAGAGCCTCATGGGATGGAAACTTCCAGCCTCCTCAGGCTGTCCCATCCCTGTCCAAGAGGGCATCTGTaGCCAGCCGGGCGCTCTCAT | + |
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Preference number: 4 (lower is better) Translates to: KEPHGMETSSLLRLSHPCPRGHL*PAGRSH Trigger: ATGAGAGCGCCCGGCTGGCCACAGATGCCCTCTTGG...ACAGGGATGGGACAGCCTGAGGAGGCTGGAAGTTTCCATCCCATGAGGCTCTTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
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| CDS-3UTR CCA 90 bp | AAAGAGCCTCATGGGATGGAAACTTCCAGCCTCCTCAGGCTGTCCCATCCCTGTTGGGCCTGGATGTACTaGGCCTCCGCTGAGGACAGG | + |
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Preference number: 4 (lower is better) Translates to: KEPHGMETSSLLRLSHPCWAWMY*ASAEDR Trigger: CCTGTCCTCAGCGGAGGCCCAGTACATCCAGGCCCA...ACAGGGATGGGACAGCCTGAGGAGGCTGGAAGTTTCCATCCCATGAGGCTCTTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
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| CDS-3UTR CCA 90 bp | GCCACCATGTGGTTGCTGGGAATTGAACTCAGGATCTCCGGAAGAGCAGTCGGTGCTGCTGTAGGGAGCTaGTGCTCCCTCATGGGGCCT | + |
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Preference number: 4 (lower is better) Translates to: ATMWLLGIELRISGRAVGAAVGS*CSLMGP Trigger: AGGCCCCATGAGGGAGCACCAGCTCCCTACAGCAGC...ACCGACTGCTCTTCCGGAGATCCTGAGTTCAATTCCCAGCAACCACATGGTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
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| CDS-3UTR CCA 90 bp | AAAGAGCCTCATGGGATGGAAACTTCCAGCCTCCTCAGGCTGTCCCATCCCTGTAGGGGTGAGTCACCCTaGGCACCAGGCCGAGTTGCT | + |
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Preference number: 4 (lower is better) Translates to: KEPHGMETSSLLRLSHPCRGESP*APGRVA Trigger: AGCAACTCGGCCTGGTGCCCAGGGTGACTCACCCCT...ACAGGGATGGGACAGCCTGAGGAGGCTGGAAGTTTCCATCCCATGAGGCTCTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
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| CDS-3UTR TCA 90 bp | CTAAAGAGCCTCATGGGATGGAAACTTCCAGCCTCCTCAGGCTGTCCCATCCCTGGGACTGCTGGGCCCTaGAGATGTGGACAGACTCTG | + |
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Preference number: 4 (lower is better) Translates to: LKSLMGWKLPASSGCPIPGTAGP*RCGQTL Trigger: CAGAGTCTGTCCACATCTTCAGGGCCCAGCAGTCCC...AGGGATGGGACAGCCTGAGGAGGCTGGAAGTTTCCATCCCATGAGGCTCTTTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
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| CDS-3UTR CCA 90 bp | CCCACCCCAACCCCGACTCCCAGTGCTATTAGCTCACAGGGAACCAGGCTCAATGCTGGCCGGGTCCACTaGTTCTTGACATCTTCCAGA | + |
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Preference number: 4 (lower is better) Translates to: PTPTPTPSAISSQGTRLNAGRVH*FLTSSR Trigger: TCTGGAAGATGTCAAGAACCAGTGGACCCGGCCAGC...ATTGAGCCTGGTTCCCTGTGAGCTAATAGCACTGGGAGTCGGGGTTGGGGTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
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| CDS-3UTR CCA 90 bp | CCACCATGTGGTTGCTGGGAATTGAACTCAGGATCTCCGGAAGAGCAGTCGGTGGGTGTGCAGCAGAGCTaGCTCACTGCCTTCCGAAGC | + |
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Preference number: 4 (lower is better) Translates to: PPCGCWELNSGSPEEQSVGVQQS*LTAFRS Trigger: GCTTCGGAAGGCAGTGAGCCAGCTCTGCTGCACACC...CACCGACTGCTCTTCCGGAGATCCTGAGTTCAATTCCCAGCAACCACATGGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
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| CDS-3UTR CCA 90 bp | CCGACTCCCAGTGCTATTAGCTCACAGGGAACCAGGCTCAATCATATTGGTCCTCCTTGGAACCGTGGGTaGGATGGGGGCCAGGGGACT | + |
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Preference number: 4 (lower is better) Translates to: PTPSAISSQGTRLNHIGPPWNRG*DGGQGT Trigger: AGTCCCCTGGCCCCCATCCCACCCACGGTTCCAAGG...AGGACCAATATGATTGAGCCTGGTTCCCTGTGAGCTAATAGCACTGGGAGTCGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
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| CDS-3UTR CCA 90 bp | GAGGCCGGAGAGAGTAGAAAGAAGTCTCTGTCCAATTTCAGTGTCAGGAAGGGGTGGGCCTGGATGTACTaGGCCTCCGCTGAGGACAGG | + |
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Preference number: 4 (lower is better) Translates to: EAGESRKKSLSNFSVRKGWAWMY*ASAEDR Trigger: CCTGTCCTCAGCGGAGGCCCAGTACATCCAGGCCCA...CCCCTTCCTGACACTGAAATTGGACAGAGACTTCTTTCTACTCTCTCCGGCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050374.3 |
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| CDS-3UTR CCA 90 bp | CAGCTGGTACCCCACTTAGCCCATCACTGCCCGGAAGCCTGGACAGCAGATGAAATACCCCGCGCTTGTTaGCTGCCTCTAGAATGTCAC | + |
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Preference number: 4 (lower is better) Translates to: QLVPHLAHHCPEAWTADEIPRAC*LPLECH Trigger: GTGACATTCTAGAGGCAGCCAACAAGCGCGGGGTAT...TTCATCTGCTGTCCAGGCTTCCGGGCAGTGATGGGCTAAGTGGGGTACCAGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050374.3 |
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| CDS-3UTR CCA 90 bp | TTAAGGTACAGCCTTACAGCCAGGAAATTCTGCAGTGCTCAGTCCTTCCCCCACGACCCATCAGGGGCTTaGAGGAGGCGTAGAGGCGTC | + |
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Preference number: 4 (lower is better) Translates to: LRYSLTARKFCSAQSFPHDPSGA*RRRRGV Trigger: GACGCCTCTACGCCTCCTCCAAGCCCCTGATGGGTC...GTGGGGGAAGGACTGAGCACTGCAGAATTTCCTGGCTGTAAGGCTGTACCTTAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
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| CDS-3UTR CCA 90 bp | AAAGAGCCTCATGGGATGGAAACTTCCAGCCTCCTCAGGCTGTCCCATCCCTGTGACAGACTCTGGTTGTaGGCATTGCTGCCGGTCGAC | + |
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Preference number: 4 (lower is better) Translates to: KEPHGMETSSLLRLSHPCDRLWL*ALLPVD Trigger: GTCGACCGGCAGCAATGCCCACAACCAGAGTCTGTC...ACAGGGATGGGACAGCCTGAGGAGGCTGGAAGTTTCCATCCCATGAGGCTCTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
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| CDS-3UTR GCA 90 bp | AAAGAGCCTCATGGGATGGAAACTTCCAGCCTCCTCAGGCTGTCCCATCCCTGTGACGTTTCCGGATCTTaGCCACATGCCTTGACCGAC | + |
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Preference number: 4 (lower is better) Translates to: KEPHGMETSSLLRLSHPCDVSGS*PHALTD Trigger: GTCGGTCAAGGCATGTGGGCAAGATCCGGAAACGTC...ACAGGGATGGGACAGCCTGAGGAGGCTGGAAGTTTCCATCCCATGAGGCTCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
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| CDS-3UTR CCA 90 bp | CCACCATGTGGTTGCTGGGAATTGAACTCAGGATCTCCGGAAGAGCAGTCGGTGTGGGCCCTGAAGATGTaGACAGACTCTGGTTGTGGG | + |
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Preference number: 4 (lower is better) Translates to: PPCGCWELNSGSPEEQSVWALKM*TDSGCG Trigger: CCCACAACCAGAGTCTGTCCACATCTTCAGGGCCCA...CACCGACTGCTCTTCCGGAGATCCTGAGTTCAATTCCCAGCAACCACATGGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
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| CDS-3UTR TCA 90 bp | CAGACAGGTTCTGGCGTCTCATTGCTAATCCATCAGGTCCAGGGAACAGTTTTTAGTCACTGGTGCCGCTaGGGCGGCCATTGGGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: QTGSGVSLLIHQVQGTVFSHWCR*GGHWEL Trigger: AAGCTCCCAATGGCCGCCTCAGCGGCACCAGTGACT...AAAAACTGTTCCCTGGACCTGATGGATTAGCAATGAGACGCCAGAACCTGTCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
||
| CDS-3UTR TCA 90 bp | ATTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATTGAACTCAGGATCTCGGTCGACAGGCTGCTaGAGGGGTTGGAGGAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: ITDGCEPPCGCWELNSGSRSTGC*RGWRRC Trigger: GCACCTCCTCCAACCCCTTCAGCAGCCTGTCGACCG...AGATCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCTGTAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
||
| CDS-3UTR TCA 90 bp | TTCAGACACTCCAGAAGAGGAGGTCAGATCTCATTACAGATGGTTGTGAGCCACTGGGCCTGTAGGCCATaGGGCTGCTGTAGGGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FRHSRRGGQISLQMVVSHWACRP*GCCREL Trigger: CAGCTCCCTACAGCAGCCTCATGGCCTACAGGCCCA...GTGGCTCACAACCATCTGTAATGAGATCTGACCTCCTCTTCTGGAGTGTCTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
||
| CDS-3UTR GCA 90 bp | GCCACCATGTGGTTGCTGGGAATTGAACTCAGGATCTCCGGAAGAGCAGTCGGTGAGAGGATGTTCCTGTaGACGTGTCCACAGAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: ATMWLLGIELRISGRAVGERMFL*TCPQSQ Trigger: TTGGCTCTGTGGACACGTGCACAGGAACATCCTCTC...ACCGACTGCTCTTCCGGAGATCCTGAGTTCAATTCCCAGCAACCACATGGTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
||
| CDS-3UTR CCA 90 bp | CCTAAGAGGCCGGAGAGAGTAGAAAGAAGTCTCTGTCCAATTTCAGTGTCAGGAAGAATGGCCAGGACCTaGCTGGCCCGGGAGATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PKRPERVERSLCPISVSGRMART*LAREMQ Trigger: CTGCATCTCCCGGGCCAGCCAGGTCCTGGCCATTCT...TCCTGACACTGAAATTGGACAGAGACTTCTTTCTACTCTCTCCGGCCTCTTAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050374.3 |
||
| 3UTR CAA 72 bp | ACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATaGAACTCAGGATCTCCGGAAGAGCAGTCGGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TDGCEPPCGCWE*NSGSPEEQSVL Trigger: GAGCACCGACTGCTCTTCCGGAGATCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
||
| CDS-3UTR TCA 90 bp | CCACCATGTGGTTGCTGGGAATTGAACTCAGGATCTCCGGAAGAGCAGTCGGTGGGCAAATTTCCTGCCTaGCTTGGCACAATACACCTC | + |
|
Preference number: 4 (lower is better) Translates to: PPCGCWELNSGSPEEQSVGKFPA*LGTIHL Trigger: GAGGTGTATTGTGCCAAGTCAGGCAGGAAATTTGCC...CACCGACTGCTCTTCCGGAGATCCTGAGTTCAATTCCCAGCAACCACATGGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
||
| CDS-3UTR CCA 90 bp | GGAGAGAGTAGAAAGAAGTCTCTGTCCAATTTCAGTGTCAGGAAGGGGCCACATCATCAGGGGGCTCCTTaGCCTGGGCCTGGATGTACT | + |
|
Preference number: 4 (lower is better) Translates to: GESRKKSLSNFSVRKGPHHQGAP*PGPGCT Trigger: AGTACATCCAGGCCCAGGCCAAGGAGCCCCCTGATG...ATGTGGCCCCTTCCTGACACTGAAATTGGACAGAGACTTCTTTCTACTCTCTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050374.3 |
||
| CDS-3UTR CCA 90 bp | GGCAGGTGGCTGCCCTGGGCTTTGCTGAAGGCCATTCCTAGCCATGACAACTCACCATTTGGAAGTAGATaGTGGCACTGGACTTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GRWLPWALLKAIPSHDNSPFGSR*WHWTFP Trigger: AGGAAAAGTCCAGTGCCACCATCTACTTCCAAATGG...TGAGTTGTCATGGCTAGGAATGGCCTTCAGCAAAGCCCAGGGCAGCCACCTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
||
| CDS-3UTR CCA 90 bp | ATTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATTGAACTCAGGATCTAGAATGGCCAGGACCTaGCTGGCCCGGGAGATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ITDGCEPPCGCWELNSGSRMART*LAREMQ Trigger: CTGCATCTCCCGGGCCAGCCAGGTCCTGGCCATTCT...AGATCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCTGTAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
||
| CDS-3UTR CCA 90 bp | CCGACTCCCAGTGCTATTAGCTCACAGGGAACCAGGCTCAATCATATTGGTCCTTTGTCACACATCTCCTaGAAGAGCTTCACCCCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: PTPSAISSQGTRLNHIGPLSHIS*KSFTPP Trigger: GGGCGGGGTGAAGCTCTTCCAGGAGATGTGTGACAA...AGGACCAATATGATTGAGCCTGGTTCCCTGTGAGCTAATAGCACTGGGAGTCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
||
| CDS-3UTR CCA 90 bp | CCCACCCCAACCCCGACTCCCAGTGCTATTAGCTCACAGGGAACCAGGCTCAATAACTTCTCTTGGATTTaGCCGGCAAATTTCCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PTPTPTPSAISSQGTRLNNFSWI*PANFLP Trigger: AGGCAGGAAATTTGCCGGCCAAATCCAAGAGAAGTT...ATTGAGCCTGGTTCCCTGTGAGCTAATAGCACTGGGAGTCGGGGTTGGGGTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
||
| CDS-3UTR CCA 90 bp | ATTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATTGAACTCAGGATCTAGGAGGTGCGGTCACTaGCAGAGTCACTGGTGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: ITDGCEPPCGCWELNSGSRRCGH*QSHWCR Trigger: GCGGCACCAGTGACTCTGCCAGTGACCGCACCTCCT...AGATCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCTGTAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
||
| CDS-3UTR TCA 90 bp | GAGGCCGGAGAGAGTAGAAAGAAGTCTCTGTCCAATTTCAGTGTCAGGAAGGGGGGGTCCACTGGTTCTTaGCATCTTCCAGACGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: EAGESRKKSLSNFSVRKGGSTGS*HLPDVS Trigger: GGAAACGTCTGGAAGATGTCAAGAACCAGTGGACCC...CCCCTTCCTGACACTGAAATTGGACAGAGACTTCTTTCTACTCTCTCCGGCCTC 52% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENSMUST00000050374.3 |
||
| CDS-3UTR TCA 90 bp | TTAAGGTACAGCCTTACAGCCAGGAAATTCTGCAGTGCTCAGTCCTTCCCCCACGGGTCCACTGGTTCTTaGCATCTTCCAGACGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LRYSLTARKFCSAQSFPHGSTGS*HLPDVS Trigger: GGAAACGTCTGGAAGATGTCAAGAACCAGTGGACCC...GTGGGGGAAGGACTGAGCACTGCAGAATTTCCTGGCTGTAAGGCTGTACCTTAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
||
| CDS-3UTR CCA 90 bp | AAAGAAGTCTCTGTCCAATTTCAGTGTCAGGAAGGGGCCACATTTCTCACTTCTGCGCCAGTAAGCCTCTaGACCGCCATCCAAGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KEVSVQFQCQEGATFLTSAPVSL*TAIQEG Trigger: GCCCTCTTGGATGGCGGTCCAGAGGCTTACTGGCGC...AGAAGTGAGAAATGTGGCCCCTTCCTGACACTGAAATTGGACAGAGACTTCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050374.3 |
||
| CDS-3UTR CCA 90 bp | TTCAGACACTCCAGAAGAGGAGGTCAGATCTCATTACAGATGGTTGTGAGCCACACACATCCATCAGAATaGCCAGGACCTGGCTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: FRHSRRGGQISLQMVVSHTHPSE*PGPGWP Trigger: GGGCCAGCCAGGTCCTGGCCATTCTGATGGATGTGT...GTGGCTCACAACCATCTGTAATGAGATCTGACCTCCTCTTCTGGAGTGTCTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
||
| CDS-3UTR CCA 90 bp | GTTCTCTTAAGCAAGAGCCAGAGTCTGCTAAAGAGCCTCATGGGATGGAAACTTCCTCATGGGGCCTCATaGGGACCAAGAGAGGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: VLLSKSQSLLKSLMGWKLPHGAS*GPREAV Trigger: CACAGCCTCTCTTGGTCCCCATGAGGCCCCATGAGG...AAGTTTCCATCCCATGAGGCTCTTTAGCAGACTCTGGCTCTTGCTTAAGAGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
||
| CDS-3UTR TCA 90 bp | CCGACTCCCAGTGCTATTAGCTCACAGGGAACCAGGCTCAATCATATTGGTCCTGGATCTCCACATCCGTaGACACATCCATCAGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: PTPSAISSQGTRLNHIGPGSPHP*THPSEW Trigger: CCATTCTGATGGATGTGTTCACGGATGTGGAGATCC...AGGACCAATATGATTGAGCCTGGTTCCCTGTGAGCTAATAGCACTGGGAGTCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
||
| CDS-3UTR GCA 90 bp | GAGGCCGGAGAGAGTAGAAAGAAGTCTCTGTCCAATTTCAGTGTCAGGAAGGGGGGCCGGCAAATTTCCTaGCTGACTTGGCACAATACA | + |
|
Preference number: 4 (lower is better) Translates to: EAGESRKKSLSNFSVRKGGRQIS*LTWHNT Trigger: TGTATTGTGCCAAGTCAGGCAGGAAATTTGCCGGCC...CCCCTTCCTGACACTGAAATTGGACAGAGACTTCTTTCTACTCTCTCCGGCCTC 51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000050374.3 |
||
| CDS-3UTR GCA 90 bp | ATTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATTGAACTCAGGATCTAACAGCTCCACCGCTTaGCCCGTGAACTTGGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ITDGCEPPCGCWELNSGSNSSTA*PVNLER Trigger: CCTCTCCAAGTTCACGGGGCAAGCGGTGGAGCTGTT...AGATCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCTGTAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
||
| CDS-3UTR CCA 90 bp | AGAGTAGAAAGAAGTCTCTGTCCAATTTCAGTGTCAGGAAGGGGCCACATTTCTAGGAGTCCAGTCCTCTaGGTCCTGACTCAGCCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RVERSLCPISVSGRGHISRSPVL*VLTQPL Trigger: GAGGGGCTGAGTCAGGACCCAGAGGACTGGACTCCT...AGAAATGTGGCCCCTTCCTGACACTGAAATTGGACAGAGACTTCTTTCTACTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050374.3 |
||
| CDS-3UTR CCA 90 bp | ATTCCTAAGAGGCCGGAGAGAGTAGAAAGAAGTCTCTGTCCAATTTCAGTGTCAGGTGTGCAGCAGAGCTaGCTCACTGCCTTCCGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: IPKRPERVERSLCPISVSGVQQS*LTAFRS Trigger: GCTTCGGAAGGCAGTGAGCCAGCTCTGCTGCACACC...TGACACTGAAATTGGACAGAGACTTCTTTCTACTCTCTCCGGCCTCTTAGGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050374.3 |
||
| CDS-3UTR TCA 90 bp | GAGGCCGGAGAGAGTAGAAAGAAGTCTCTGTCCAATTTCAGTGTCAGGAAGGGGGGCGGACCAAATCTCTaGTGTTGTTGTGTTTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: EAGESRKKSLSNFSVRKGGGPNL*CCCVCP Trigger: TGGACAAACACAACAACATCAGAGATTTGGTCCGCC...CCCCTTCCTGACACTGAAATTGGACAGAGACTTCTTTCTACTCTCTCCGGCCTC 50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000050374.3 |
||
| CDS-3UTR CCA 90 bp | ATTCCTAAGAGGCCGGAGAGAGTAGAAAGAAGTCTCTGTCCAATTTCAGTGTCAACACATCCATCAGAATaGCCAGGACCTGGCTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: IPKRPERVERSLCPISVSTHPSE*PGPGWP Trigger: GGGCCAGCCAGGTCCTGGCCATTCTGATGGATGTGT...TGACACTGAAATTGGACAGAGACTTCTTTCTACTCTCTCCGGCCTCTTAGGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050374.3 |
||
| CDS-3UTR CCA 90 bp | TTAAGGTACAGCCTTACAGCCAGGAAATTCTGCAGTGCTCAGTCCTTCCCCCACATTTCCTGCCTGACTTaGCACAATACACCTCCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LRYSLTARKFCSAQSFPHISCLT*HNTPPL Trigger: AAGGGGAGGTGTATTGTGCCAAGTCAGGCAGGAAAT...GTGGGGGAAGGACTGAGCACTGCAGAATTTCCTGGCTGTAAGGCTGTACCTTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
||
| CDS-3UTR CCA 90 bp | ATTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATTGAACTCAGGATCTGATGTGGACAGACTCTaGTTGTGGGCATTGCTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: ITDGCEPPCGCWELNSGSDVDRL*LWALLP Trigger: CGGCAGCAATGCCCACAACCAGAGTCTGTCCACATC...AGATCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCTGTAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
||
| CDS-3UTR TCA 90 bp | CCTAAGAGGCCGGAGAGAGTAGAAAGAAGTCTCTGTCCAATTTCAGTGTCAGGAGGATCTCCACATCCGTaGACACATCCATCAGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: PKRPERVERSLCPISVSGGSPHP*THPSEW Trigger: CCATTCTGATGGATGTGTTCACGGATGTGGAGATCC...TCCTGACACTGAAATTGGACAGAGACTTCTTTCTACTCTCTCCGGCCTCTTAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050374.3 |
||
| CDS-3UTR GCA 90 bp | CAATTTCAGTGTCAGGAAGGGGCCACATTTCTCACTTCTGGCTTCGTTTATTTGGACGTTTCCGGATCTTaGCCACATGCCTTGACCGAC | + |
|
Preference number: 4 (lower is better) Translates to: QFQCQEGATFLTSGFVYLDVSGS*PHALTD Trigger: GTCGGTCAAGGCATGTGGGCAAGATCCGGAAACGTC...CAAATAAACGAAGCCAGAAGTGAGAAATGTGGCCCCTTCCTGACACTGAAATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050374.3 |
||
| CDS-3UTR CCA 90 bp | ATTCCTAAGAGGCCGGAGAGAGTAGAAAGAAGTCTCTGTCCAATTTCAGTGTCAGCTGGCCGGGTCCACTaGTTCTTGACATCTTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: IPKRPERVERSLCPISVSAGRVH*FLTSSR Trigger: TCTGGAAGATGTCAAGAACCAGTGGACCCGGCCAGC...TGACACTGAAATTGGACAGAGACTTCTTTCTACTCTCTCCGGCCTCTTAGGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050374.3 |
||
| CDS-3UTR CCA 90 bp | ATTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATTGAACTCAGGATCTATACCCCGCGCTTGTTaGCTGCCTCTAGAATGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: ITDGCEPPCGCWELNSGSIPRAC*LPLECH Trigger: GTGACATTCTAGAGGCAGCCAACAAGCGCGGGGTAT...AGATCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCTGTAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
||
| CDS-3UTR TCA 90 bp | AAAGAAGTCTCTGTCCAATTTCAGTGTCAGGAAGGGGCCACATTTCTCACTTCTGGCAAATTTCCTGCCTaGCTTGGCACAATACACCTC | + |
|
Preference number: 4 (lower is better) Translates to: KEVSVQFQCQEGATFLTSGKFPA*LGTIHL Trigger: GAGGTGTATTGTGCCAAGTCAGGCAGGAAATTTGCC...AGAAGTGAGAAATGTGGCCCCTTCCTGACACTGAAATTGGACAGAGACTTCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050374.3 |
||
| CDS-3UTR CCA 90 bp | CCAATTTCAGTGTCAGGAAGGGGCCACATTTCTCACTTCTGGCTTCGTTTATTTCCATTTGGAAGTAGATaGTGGCACTGGACTTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PISVSGRGHISHFWLRLFPFGSR*WHWTFP Trigger: AGGAAAAGTCCAGTGCCACCATCTACTTCCAAATGG...AAATAAACGAAGCCAGAAGTGAGAAATGTGGCCCCTTCCTGACACTGAAATTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050374.3 |
||
| CDS-3UTR CCA 90 bp | CAATTTCAGTGTCAGGAAGGGGCCACATTTCTCACTTCTGGCTTCGTTTATTTGAACTTCTCTTGGATTTaGCCGGCAAATTTCCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QFQCQEGATFLTSGFVYLNFSWI*PANFLP Trigger: AGGCAGGAAATTTGCCGGCCAAATCCAAGAGAAGTT...CAAATAAACGAAGCCAGAAGTGAGAAATGTGGCCCCTTCCTGACACTGAAATTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050374.3 |
||
| CDS-3UTR CCA 90 bp | AAAGTTAAAAGCAAATCTATTGTTTTATCACAATTCCTAAGAGGCCGGAGAGAGTTGTCACACATCTCCTaGAAGAGCTTCACCCCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: KVKSKSIVLSQFLRGRRELSHIS*KSFTPP Trigger: GGGCGGGGTGAAGCTCTTCCAGGAGATGTGTGACAA...CTCTCTCCGGCCTCTTAGGAATTGTGATAAAACAATAGATTTGCTTTTAACTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000050374.3 |
||
| CDS-3UTR CCA 90 bp | ATTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATTGAACTCAGGATCTATGATGAACTTCTCTTaGATTTGGCCGGCAAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: ITDGCEPPCGCWELNSGSMMNFS*IWPANF Trigger: GAAATTTGCCGGCCAAATCCAAGAGAAGTTCATCAT...AGATCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCTGTAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
||
| CDS-3UTR CCA 90 bp | AAAGAAGTCTCTGTCCAATTTCAGTGTCAGGAAGGGGCCACATTTCTCACTTCTATGATGAACTTCTCTTaGATTTGGCCGGCAAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: KEVSVQFQCQEGATFLTSMMNFS*IWPANF Trigger: GAAATTTGCCGGCCAAATCCAAGAGAAGTTCATCAT...AGAAGTGAGAAATGTGGCCCCTTCCTGACACTGAAATTGGACAGAGACTTCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050374.3 |
||
| CDS-3UTR CCA 90 bp | AAAGTTAAAAGCAAATCTATTGTTTTATCACAATTCCTAAGAGGCCGGAGAGAGATTTCCTGCCTGACTTaGCACAATACACCTCCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: KVKSKSIVLSQFLRGRREISCLT*HNTPPL Trigger: AAGGGGAGGTGTATTGTGCCAAGTCAGGCAGGAAAT...CTCTCTCCGGCCTCTTAGGAATTGTGATAAAACAATAGATTTGCTTTTAACTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000050374.3 |
||
| CDS TCA 90 bp | CCAGGCCGAGTTGCTGCAGCTGCAGCCGGGTGGGCCTGTAGGCCATaGGGCTGCTGTAGGGAGCTGGTGCTCCCTCATGGGGCCTCATGG | + |
|
Preference number: 5 (lower is better) Translates to: PGRVAAAAAGWACRP*GCCRELVLPHGASW Trigger: CCATGAGGCCCCATGAGGGAGCACCAGCTCCCTACAGCAGCCTCATGGCCTACAGGCCCACCCGGCTGCAGCTGCAGCAACTCGGCCTGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
||
| CDS GCA 90 bp | GCCTCATGGGGACCAAGAGAGGCTGTGGGGCCACGGCTCTCCGGGTaGTGTGATAGGGCTGCAGCCTTGGAACCGTGGGTGGGATGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: ASWGPREAVGPRLSG*CDRAAALEPWVGWG Trigger: CCCCCATCCCACCCACGGTTCCAAGGCTGCAGCCCTATCACAGCACCCGGAGAGCCGTGGCCCCACAGCCTCTCTTGGTCCCCATGAGGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
||
| CDS CCA 90 bp | CCGTGGGTGGGATGGGGGCCAGGGGACTGCTGGGCCCTGAAGATGTaGACAGACTCTGGTTGTGGGCATTGCTGCCGGTCGACAGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PWVGWGPGDCWALKM*TDSGCGHCCRSTGC Trigger: GCAGCCTGTCGACCGGCAGCAATGCCCACAACCAGAGTCTGTCCACATCTTCAGGGCCCAGCAGTCCCCTGGCCCCCATCCCACCCACGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
||
| CDS CCA 90 bp | ACTGGCAGAGTCACTGGTGCCGCTGAGGCGGCCATTGGGAGCTTCTaGGCCCTTGTTGGGTTGGAACGGGGCGACCAGCCTCGGGGACTT | + |
|
Preference number: 5 (lower is better) Translates to: TGRVTGAAEAAIGSF*ALVGLERGDQPRGL Trigger: AAGTCCCCGAGGCTGGTCGCCCCGTTCCAACCCAACAAGGGCCCAGAAGCTCCCAATGGCCGCCTCAGCGGCACCAGTGACTCTGCCAGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
||
| CDS TCA 90 bp | AGGGGTTGGAGGAGGTGCGGTCACTGGCAGAGTCACTGGTGCCGCTaGGGCGGCCATTGGGAGCTTCTGGGCCCTTGTTGGGTTGGAACG | + |
|
Preference number: 5 (lower is better) Translates to: RGWRRCGHWQSHWCR*GGHWELLGPCWVGT Trigger: CGTTCCAACCCAACAAGGGCCCAGAAGCTCCCAATGGCCGCCTCAGCGGCACCAGTGACTCTGCCAGTGACCGCACCTCCTCCAACCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
||
| CDS TCA 90 bp | CCTTGGAACCGTGGGTGGGATGGGGGCCAGGGGACTGCTGGGCCCTaGAGATGTGGACAGACTCTGGTTGTGGGCATTGCTGCCGGTCGA | + |
|
Preference number: 5 (lower is better) Translates to: PWNRGWDGGQGTAGP*RCGQTLVVGIAAGR Trigger: TCGACCGGCAGCAATGCCCACAACCAGAGTCTGTCCACATCTTCAGGGCCCAGCAGTCCCCTGGCCCCCATCCCACCCACGGTTCCAAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
||
| CDS CCA 90 bp | GAAGTCTACCTCTCCTTCCTGACTGAGGGCGCGCCAGTAAGCCTCTaGACCGCCATCCAAGAGGGCATCTGTGGCCAGCCGGGCGCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: EVYLSFLTEGAPVSL*TAIQEGICGQPGAL Trigger: GAGAGCGCCCGGCTGGCCACAGATGCCCTCTTGGATGGCGGTCCAGAGGCTTACTGGCGCGCCCTCAGTCAGGAAGGAGAGGTAGACTTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050374.3 ENSMUST00000160942.8 |
||
| CDS CCA 90 bp | GCCAGGGGACTGCTGGGCCCTGAAGATGTGGACAGACTCTGGTTGTaGGCATTGCTGCCGGTCGACAGGCTGCTGAAGGGGTTGGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: ARGLLGPEDVDRLWL*ALLPVDRLLKGLEE Trigger: CTCCTCCAACCCCTTCAGCAGCCTGTCGACCGGCAGCAATGCCCACAACCAGAGTCTGTCCACATCTTCAGGGCCCAGCAGTCCCCTGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
||
| CDS TCA 90 bp | ACTGGGCCTCCGCTGAGGACAGGAAGTCTACCTCTCCTTCCTGACTaGGGGCGCGCCAGTAAGCCTCTGGACCGCCATCCAAGAGGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: TGPPLRTGSLPLLPD*GRASKPLDRHPRGH Trigger: ATGCCCTCTTGGATGGCGGTCCAGAGGCTTACTGGCGCGCCCTCAGTCAGGAAGGAGAGGTAGACTTCCTGTCCTCAGCGGAGGCCCAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050374.3 ENSMUST00000160942.8 |
||
| CDS-3UTR CAA 90 bp | CCACCATGTGGTTGCTGGGAATTGAACTCAGGATCTCCGGAAGAGCAGTCGGTGCCGCTGAGGCGGCCATaGGGAGCTTCTGGGCCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: PPCGCWELNSGSPEEQSVPLRRP*GASGPL Trigger: CAAGGGCCCAGAAGCTCCCAATGGCCGCCTCAGCGG...CACCGACTGCTCTTCCGGAGATCCTGAGTTCAATTCCCAGCAACCACATGGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
||
| CDS-3UTR CAA 90 bp | AAAGAGCCTCATGGGATGGAAACTTCCAGCCTCCTCAGGCTGTCCCATCCCTGTTGGGCCCTTGTTGGGTaGGAACGGGGCGACCAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: KEPHGMETSSLLRLSHPCWALVG*ERGDQP Trigger: AGGCTGGTCGCCCCGTTCCAACCCAACAAGGGCCCA...ACAGGGATGGGACAGCCTGAGGAGGCTGGAAGTTTCCATCCCATGAGGCTCTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
||
| CDS-3UTR CAA 90 bp | CCCACCCCAACCCCGACTCCCAGTGCTATTAGCTCACAGGGAACCAGGCTCAATGTGGACAGACTCTGGTaGTGGGCATTGCTGCCGGTC | + |
|
Preference number: 5 (lower is better) Translates to: PTPTPTPSAISSQGTRLNVDRLW*WALLPV Trigger: GACCGGCAGCAATGCCCACAACCAGAGTCTGTCCAC...ATTGAGCCTGGTTCCCTGTGAGCTAATAGCACTGGGAGTCGGGGTTGGGGTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
||
| CDS-3UTR CAA 90 bp | GGTGGGGTGGGAGCAGCCATCATCCAGCTGGTACCCCACTTAGCCCATCACTGCAATACCCCGCGCTTGTaGGCTGCCTCTAGAATGTCA | + |
|
Preference number: 5 (lower is better) Translates to: GGVGAAIIQLVPHLAHHCNTPRL*AASRMS Trigger: TGACATTCTAGAGGCAGCCAACAAGCGCGGGGTATT...GCAGTGATGGGCTAAGTGGGGTACCAGCTGGATGATGGCTGCTCCCACCCCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000050374.3 |
||
| CDS CCA 90 bp | TGTGGCCAGCCGGGCGCTCTCATTATCACTGAAGTCAGCTCTGGCTaGCCGGGTCCACTGGTTCTTGACATCTTCCAGACGTTTCCGGAT | + |
|
Preference number: 5 (lower is better) Translates to: CGQPGALIITEVSSG*PGPLVLDIFQTFPD Trigger: ATCCGGAAACGTCTGGAAGATGTCAAGAACCAGTGGACCCGGCCAGCCAGAGCTGACTTCAGTGATAATGAGAGCGCCCGGCTGGCCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050374.3 ENSMUST00000160942.8 |
||
| CDS CCA 90 bp | ATCTGGACTTTGTCACACATCTCCTGGAAGAGCTTCACCCCGCCCTaGTCCAGAAGCACACAGACGAATACCCCGCGCTTGTTGGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: IWTLSHISWKSFTPP*SRSTQTNTPRLLAA Trigger: GGCAGCCAACAAGCGCGGGGTATTCGTCTGTGTGCTTCTGGACCAGGGCGGGGTGAAGCTCTTCCAGGAGATGTGTGACAAAGTCCAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050374.3 ENSMUST00000160942.8 |
||
| CDS-3UTR CAA 90 bp | GGTGGGAGCAGCCATCATCCAGCTGGTACCCCACTTAGCCCATCACTGCCCGGAGAACTTCTCTTGGATTaGGCCGGCAAATTTCCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: GGSSHHPAGTPLSPSLPGELLLD*AGKFPA Trigger: GGCAGGAAATTTGCCGGCCAAATCCAAGAGAAGTTC...TCCGGGCAGTGATGGGCTAAGTGGGGTACCAGCTGGATGATGGCTGCTCCCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050374.3 |
||
| CDS-3UTR CAA 90 bp | CCGACTCCCAGTGCTATTAGCTCACAGGGAACCAGGCTCAATCATATTGGTCCTGCTTCTGGGCCCTTGTaGGGTTGGAACGGGGCGACC | + |
|
Preference number: 5 (lower is better) Translates to: PTPSAISSQGTRLNHIGPASGPL*GWNGAT Trigger: GGTCGCCCCGTTCCAACCCAACAAGGGCCCAGAAGC...AGGACCAATATGATTGAGCCTGGTTCCCTGTGAGCTAATAGCACTGGGAGTCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
||
| CDS-3UTR CAA 90 bp | CCACCATGTGGTTGCTGGGAATTGAACTCAGGATCTCCGGAAGAGCAGTCGGTGAAACAGCTCCACCGCTaGCCCCGTGAACTTGGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: PPCGCWELNSGSPEEQSVKQLHR*PRELGE Trigger: CTCTCCAAGTTCACGGGGCAAGCGGTGGAGCTGTTT...CACCGACTGCTCTTCCGGAGATCCTGAGTTCAATTCCCAGCAACCACATGGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
||
| CDS TCA 90 bp | GCTTGTTGGCTGCCTCTAGAATGTCACAAAGGATCTCCACATCCGTaGACACATCCATCAGAATGGCCAGGACCTGGCTGGCCCGGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: ACWLPLECHKGSPHP*THPSEWPGPGWPGR Trigger: TCTCCCGGGCCAGCCAGGTCCTGGCCATTCTGATGGATGTGTTCACGGATGTGGAGATCCTTTGTGACATTCTAGAGGCAGCCAACAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050374.3 ENSMUST00000160942.8 |
||
| CDS TCA 90 bp | AGAGGCGTCGAAATTCCTCATCAAACAGCTCCACCGCTTGCCCCGTaGACTTGGAGAGGATGTTCCTGTGCACGTGTCCACAGAGCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: RGVEIPHQTAPPLAP*TWRGCSCARVHRAK Trigger: CTTGGCTCTGTGGACACGTGCACAGGAACATCCTCTCCAAGTTCACGGGGCAAGCGGTGGAGCTGTTTGATGAGGAATTTCGACGCCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
||
| CDS GCA 90 bp | AGGGCTTCTCAGCCAAAGTCCAGGTGTGCAGCAGAGCTGGCTCACTaGCTTCCGAAGCCACAGGGAAGTAGGTACCTGATTGTAAAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: RASQPKSRCAAELAH*LPKPQGSRYLIVKS Trigger: GCTCTTTACAATCAGGTACCTACTTCCCTGTGGCTTCGGAAGGCAGTGAGCCAGCTCTGCTGCACACCTGGACTTTGGCTGAGAAGCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050374.3 ENSMUST00000160942.8 |
||
| CDS CCA 90 bp | GCGCTCTCATTATCACTGAAGTCAGCTCTGGCTGGCCGGGTCCACTaGTTCTTGACATCTTCCAGACGTTTCCGGATCTTGCCCACATGC | + |
|
Preference number: 5 (lower is better) Translates to: ALSLSLKSALAGRVH*FLTSSRRFRILPTC Trigger: GCATGTGGGCAAGATCCGGAAACGTCTGGAAGATGTCAAGAACCAGTGGACCCGGCCAGCCAGAGCTGACTTCAGTGATAATGAGAGCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050374.3 ENSMUST00000160942.8 |
||
| CDS-3UTR CAA 90 bp | GGAGAGAGTAGAAAGAAGTCTCTGTCCAATTTCAGTGTCAGGAAGGGGCCACATGCATCAGGGGGCTCCTaGGCCTGGGCCTGGATGTAC | + |
|
Preference number: 5 (lower is better) Translates to: GESRKKSLSNFSVRKGPHASGGS*AWAWMY Trigger: GTACATCCAGGCCCAGGCCAAGGAGCCCCCTGATGC...ATGTGGCCCCTTCCTGACACTGAAATTGGACAGAGACTTCTTTCTACTCTCTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050374.3 |
||
| CDS-3UTR CAA 90 bp | CCCACCCCAACCCCGACTCCCAGTGCTATTAGCTCACAGGGAACCAGGCTCAATGAACTTCTCTTGGATTaGGCCGGCAAATTTCCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: PTPTPTPSAISSQGTRLNELLLD*AGKFPA Trigger: GGCAGGAAATTTGCCGGCCAAATCCAAGAGAAGTTC...ATTGAGCCTGGTTCCCTGTGAGCTAATAGCACTGGGAGTCGGGGTTGGGGTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
||
| CDS GCA 90 bp | AACAGCTCCACCGCTTGCCCCGTGAACTTGGAGAGGATGTTCCTGTaGACGTGTCCACAGAGCCAAGAGAAGCTGTATGATCCGGATAAG | + |
|
Preference number: 5 (lower is better) Translates to: NSSTACPVNLERMFL*TCPQSQEKLYDPDK Trigger: CTTATCCGGATCATACAGCTTCTCTTGGCTCTGTGGACACGTGCACAGGAACATCCTCTCCAAGTTCACGGGGCAAGCGGTGGAGCTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
||
| CDS-3UTR CAA 90 bp | CTAAAGAGCCTCATGGGATGGAAACTTCCAGCCTCCTCAGGCTGTCCCATCCCTAATACCCCGCGCTTGTaGGCTGCCTCTAGAATGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LKSLMGWKLPASSGCPIPNTPRL*AASRMS Trigger: TGACATTCTAGAGGCAGCCAACAAGCGCGGGGTATT...AGGGATGGGACAGCCTGAGGAGGCTGGAAGTTTCCATCCCATGAGGCTCTTTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
||
| CDS-3UTR CAA 90 bp | CCGACTCCCAGTGCTATTAGCTCACAGGGAACCAGGCTCAATCATATTGGTCCTACGAATACCCCGCGCTaGTTGGCTGCCTCTAGAATG | + |
|
Preference number: 5 (lower is better) Translates to: PTPSAISSQGTRLNHIGPTNTPR*LAASRM Trigger: CATTCTAGAGGCAGCCAACAAGCGCGGGGTATTCGT...AGGACCAATATGATTGAGCCTGGTTCCCTGTGAGCTAATAGCACTGGGAGTCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
||
| CDS-3UTR CAA 90 bp | GTTCTCTTAAGCAAGAGCCAGAGTCTGCTAAAGAGCCTCATGGGATGGAAACTTCTCTGGTTGTGGGCATaGCTGCCGGTCGACAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VLLSKSQSLLKSLMGWKLLWLWA*LPVDRL Trigger: CAGCCTGTCGACCGGCAGCAATGCCCACAACCAGAG...AAGTTTCCATCCCATGAGGCTCTTTAGCAGACTCTGGCTCTTGCTTAAGAGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
||
| CDS-3UTR CAA 90 bp | TTAAGGTACAGCCTTACAGCCAGGAAATTCTGCAGTGCTCAGTCCTTCCCCCACCGGGTCCACTGGTTCTaGACATCTTCCAGACGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: LRYSLTARKFCSAQSFPHRVHWF*TSSRRF Trigger: GAAACGTCTGGAAGATGTCAAGAACCAGTGGACCCG...GTGGGGGAAGGACTGAGCACTGCAGAATTTCCTGGCTGTAAGGCTGTACCTTAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
||
| CDS-3UTR CAA 90 bp | TCTGGCTTCGTTTATTTGGTGAGCTCTAGCTGTGGCCAGAAAGAAGAGCTGGGAACGAATACCCCGCGCTaGTTGGCTGCCTCTAGAATG | + |
|
Preference number: 5 (lower is better) Translates to: SGFVYLVSSSCGQKEELGTNTPR*LAASRM Trigger: CATTCTAGAGGCAGCCAACAAGCGCGGGGTATTCGT...TCCCAGCTCTTCTTTCTGGCCACAGCTAGAGCTCACCAAATAAACGAAGCCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050374.3 |
||
| CDS-3UTR CAA 90 bp | CTAAAGAGCCTCATGGGATGGAAACTTCCAGCCTCCTCAGGCTGTCCCATCCCTTCAGAGATCTGGACTTaGTCACACATCTCCTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LKSLMGWKLPASSGCPIPSEIWT*SHISWK Trigger: CTTCCAGGAGATGTGTGACAAAGTCCAGATCTCTGA...AGGGATGGGACAGCCTGAGGAGGCTGGAAGTTTCCATCCCATGAGGCTCTTTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
||
| CDS-3UTR CAA 90 bp | CAGACAGGTTCTGGCGTCTCATTGCTAATCCATCAGGTCCAGGGAACAGTTTTTAGACGTTTCCGGATCTaGCCCACATGCCTTGACCGA | + |
|
Preference number: 5 (lower is better) Translates to: QTGSGVSLLIHQVQGTVFRRFRI*PTCLDR Trigger: TCGGTCAAGGCATGTGGGCAAGATCCGGAAACGTCT...AAAAACTGTTCCCTGGACCTGATGGATTAGCAATGAGACGCCAGAACCTGTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
||
| CDS-3UTR CAA 90 bp | GAGGCCGGAGAGAGTAGAAAGAAGTCTCTGTCCAATTTCAGTGTCAGGAAGGGGTCAGAGATCTGGACTTaGTCACACATCTCCTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: EAGESRKKSLSNFSVRKGSEIWT*SHISWK Trigger: CTTCCAGGAGATGTGTGACAAAGTCCAGATCTCTGA...CCCCTTCCTGACACTGAAATTGGACAGAGACTTCTTTCTACTCTCTCCGGCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050374.3 |
||
| CDS CCA 90 bp | GATAAGACAAACCTCCAGTCTGAGATGATGAACTTCTCTTGGATTTaGCCGGCAAATTTCCTGCCTGACTTGGCACAATACACCTCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: DKTNLQSEMMNFSWI*PANFLPDLAQYTSP Trigger: AGGGGAGGTGTATTGTGCCAAGTCAGGCAGGAAATTTGCCGGCCAAATCCAAGAGAAGTTCATCATCTCAGACTGGAGGTTTGTCTTATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050374.3 ENSMUST00000160942.8 |
||
| CDS CCA 90 bp | GATCCGGATAAGACAAACCTCCAGTCTGAGATGATGAACTTCTCTTaGATTTGGCCGGCAAATTTCCTGCCTGACTTGGCACAATACACC | + |
|
Preference number: 5 (lower is better) Translates to: DPDKTNLQSEMMNFS*IWPANFLPDLAQYT Trigger: GGTGTATTGTGCCAAGTCAGGCAGGAAATTTGCCGGCCAAATCCAAGAGAAGTTCATCATCTCAGACTGGAGGTTTGTCTTATCCGGATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050374.3 ENSMUST00000160942.8 |
||
| CDS-3UTR CAA 90 bp | AGAAAGAAGTCTCTGTCCAATTTCAGTGTCAGGAAGGGGCCACATTTCTCACTTCGGGTCCACTGGTTCTaGACATCTTCCAGACGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: RKKSLSNFSVRKGPHFSLRVHWF*TSSRRF Trigger: GAAACGTCTGGAAGATGTCAAGAACCAGTGGACCCG...AAGTGAGAAATGTGGCCCCTTCCTGACACTGAAATTGGACAGAGACTTCTTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050374.3 |
||
| CDS-3UTR CAA 90 bp | CCGACTCCCAGTGCTATTAGCTCACAGGGAACCAGGCTCAATCATATTGGTCCTGATGATGAACTTCTCTaGGATTTGGCCGGCAAATTT | + |
|
Preference number: 5 (lower is better) Translates to: PTPSAISSQGTRLNHIGPDDELL*DLAGKF Trigger: AAATTTGCCGGCCAAATCCAAGAGAAGTTCATCATC...AGGACCAATATGATTGAGCCTGGTTCCCTGTGAGCTAATAGCACTGGGAGTCGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
||
| CDS-3UTR CAA 90 bp | AAAGTTAAAAGCAAATCTATTGTTTTATCACAATTCCTAAGAGGCCGGAGAGAGAGACGTTTCCGGATCTaGCCCACATGCCTTGACCGA | + |
|
Preference number: 5 (lower is better) Translates to: KVKSKSIVLSQFLRGRRERRFRI*PTCLDR Trigger: TCGGTCAAGGCATGTGGGCAAGATCCGGAAACGTCT...CTCTCTCCGGCCTCTTAGGAATTGTGATAAAACAATAGATTTGCTTTTAACTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050374.3 |
||
| CDS-3UTR CAA 90 bp | CAATTTCAGTGTCAGGAAGGGGCCACATTTCTCACTTCTGGCTTCGTTTATTTGGATGATGAACTTCTCTaGGATTTGGCCGGCAAATTT | + |
|
Preference number: 5 (lower is better) Translates to: QFQCQEGATFLTSGFVYLDDELL*DLAGKF Trigger: AAATTTGCCGGCCAAATCCAAGAGAAGTTCATCATC...CAAATAAACGAAGCCAGAAGTGAGAAATGTGGCCCCTTCCTGACACTGAAATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050374.3 |
||
| CDS CAA 72 bp | GTGCCGCTGAGGCGGCCATTGGGAGCTTCTGGGCCCTaGTTGGGTTGGAACGGGGCGACCAGCCTCGGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: VPLRRPLGASGP*LGWNGATSLGD Trigger: GTCCCCGAGGCTGGTCGCCCCGTTCCAACCCAACAAGGGCCCAGAAGCTCCCAATGGCCGCCTCAGCGGCAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
||
| CDS CAA 90 bp | GGTGCCGCTGAGGCGGCCATTGGGAGCTTCTGGGCCCTTGTTGGGTaGGAACGGGGCGACCAGCCTCGGGGACTTCAGACCCATCAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: GAAEAAIGSFWALVG*ERGDQPRGLQTHQG Trigger: CCCCTGATGGGTCTGAAGTCCCCGAGGCTGGTCGCCCCGTTCCAACCCAACAAGGGCCCAGAAGCTCCCAATGGCCGCCTCAGCGGCACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
||
| CDS CAA 72 bp | CCGCTGAGGCGGCCATTGGGAGCTTCTGGGCCCTTGTaGGGTTGGAACGGGGCGACCAGCCTCGGGGACTTC | + |
|
Preference number: 6 (lower is better) Translates to: PLRRPLGASGPL*GWNGATSLGDF Trigger: GAAGTCCCCGAGGCTGGTCGCCCCGTTCCAACCCAACAAGGGCCCAGAAGCTCCCAATGGCCGCCTCAGCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
||
| CDS CAA 90 bp | GAGTCACTGGTGCCGCTGAGGCGGCCATTGGGAGCTTCTGGGCCCTaGTTGGGTTGGAACGGGGCGACCAGCCTCGGGGACTTCAGACCC | + |
|
Preference number: 6 (lower is better) Translates to: ESLVPLRRPLGASGP*LGWNGATSLGDFRP Trigger: GGGTCTGAAGTCCCCGAGGCTGGTCGCCCCGTTCCAACCCAACAAGGGCCCAGAAGCTCCCAATGGCCGCCTCAGCGGCACCAGTGACTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
||
| CDS TCA 72 bp | GTTGCTGCAGCTGCAGCCGGGTGGGCCTGTAGGCCATaGGGCTGCTGTAGGGAGCTGGTGCTCCCTCATGGG | + |
|
Preference number: 6 (lower is better) Translates to: VAAAAAGWACRP*GCCRELVLPHG Trigger: CCCATGAGGGAGCACCAGCTCCCTACAGCAGCCTCATGGCCTACAGGCCCACCCGGCTGCAGCTGCAGCAAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
||
| CDS CCA 72 bp | AGGCGGCCATTGGGAGCTTCTGGGCCCTTGTTGGGTTaGAACGGGGCGACCAGCCTCGGGGACTTCAGACCC | + |
|
Preference number: 6 (lower is better) Translates to: RRPLGASGPLLG*NGATSLGDFRP Trigger: GGGTCTGAAGTCCCCGAGGCTGGTCGCCCCGTTCCAACCCAACAAGGGCCCAGAAGCTCCCAATGGCCGCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
||
| CDS CCA 72 bp | TCCCTCATGGGGCCTCATGGGGACCAAGAGAGGCTGTaGGGCCACGGCTCTCCGGGTGCTGTGATAGGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SLMGPHGDQERL*GHGSPGAVIGL Trigger: CAGCCCTATCACAGCACCCGGAGAGCCGTGGCCCCACAGCCTCTCTTGGTCCCCATGAGGCCCCATGAGGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
||
| CDS CAA 90 bp | TCACTGGTGCCGCTGAGGCGGCCATTGGGAGCTTCTGGGCCCTTGTaGGGTTGGAACGGGGCGACCAGCCTCGGGGACTTCAGACCCATC | + |
|
Preference number: 6 (lower is better) Translates to: SLVPLRRPLGASGPL*GWNGATSLGDFRPI Trigger: GATGGGTCTGAAGTCCCCGAGGCTGGTCGCCCCGTTCCAACCCAACAAGGGCCCAGAAGCTCCCAATGGCCGCCTCAGCGGCACCAGTGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
||
| CDS TCA 72 bp | AGGAGGTGCGGTCACTGGCAGAGTCACTGGTGCCGCTaGGGCGGCCATTGGGAGCTTCTGGGCCCTTGTTGG | + |
|
Preference number: 6 (lower is better) Translates to: RRCGHWQSHWCR*GGHWELLGPCW Trigger: CCAACAAGGGCCCAGAAGCTCCCAATGGCCGCCTCAGCGGCACCAGTGACTCTGCCAGTGACCGCACCTCCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
||
| CDS GCA 72 bp | GGGCCTGTAGGCCATGAGGCTGCTGTAGGGAGCTGGTaGTCCCTCATGGGGCCTCATGGGGACCAAGAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: GPVGHEAAVGSW*SLMGPHGDQER Trigger: CCTCTCTTGGTCCCCATGAGGCCCCATGAGGGAGCACCAGCTCCCTACAGCAGCCTCATGGCCTACAGGCCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
||
| CDS CCA 72 bp | CTCTCCTTCCTGACTGAGGGCGCGCCAGTAAGCCTCTaGACCGCCATCCAAGAGGGCATCTGTGGCCAGCCG | + |
|
Preference number: 6 (lower is better) Translates to: LSFLTEGAPVSL*TAIQEGICGQP Trigger: CGGCTGGCCACAGATGCCCTCTTGGATGGCGGTCCAGAGGCTTACTGGCGCGCCCTCAGTCAGGAAGGAGAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050374.3 ENSMUST00000160942.8 |
||
| CDS CCA 72 bp | GGATGGGGGCCAGGGGACTGCTGGGCCCTGAAGATGTaGACAGACTCTGGTTGTGGGCATTGCTGCCGGTCG | + |
|
Preference number: 6 (lower is better) Translates to: GWGPGDCWALKM*TDSGCGHCCRS Trigger: CGACCGGCAGCAATGCCCACAACCAGAGTCTGTCCACATCTTCAGGGCCCAGCAGTCCCCTGGCCCCCATCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
||
| CDS CAA 90 bp | CTCTGGTTGTGGGCATTGCTGCCGGTCGACAGGCTGCTGAAGGGGTaGGAGGAGGTGCGGTCACTGGCAGAGTCACTGGTGCCGCTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: LWLWALLPVDRLLKG*EEVRSLAESLVPLR Trigger: CCTCAGCGGCACCAGTGACTCTGCCAGTGACCGCACCTCCTCCAACCCCTTCAGCAGCCTGTCGACCGGCAGCAATGCCCACAACCAGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
||
| CDS CAA 90 bp | GGACTGCTGGGCCCTGAAGATGTGGACAGACTCTGGTTGTGGGCATaGCTGCCGGTCGACAGGCTGCTGAAGGGGTTGGAGGAGGTGCGG | + |
|
Preference number: 6 (lower is better) Translates to: GLLGPEDVDRLWLWA*LPVDRLLKGLEEVR Trigger: CCGCACCTCCTCCAACCCCTTCAGCAGCCTGTCGACCGGCAGCAATGCCCACAACCAGAGTCTGTCCACATCTTCAGGGCCCAGCAGTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
||
| CDS TCA 72 bp | GGGCATCTGTGGCCAGCCGGGCGCTCTCATTATCACTaGAGTCAGCTCTGGCTGGCCGGGTCCACTGGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: GHLWPAGRSHYH*SQLWLAGSTGS Trigger: AGAACCAGTGGACCCGGCCAGCCAGAGCTGACTTCAGTGATAATGAGAGCGCCCGGCTGGCCACAGATGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050374.3 ENSMUST00000160942.8 |
||
| CDS TCA 72 bp | CCGCTGAGGACAGGAAGTCTACCTCTCCTTCCTGACTaGGGGCGCGCCAGTAAGCCTCTGGACCGCCATCCA | + |
|
Preference number: 6 (lower is better) Translates to: PLRTGSLPLLPD*GRASKPLDRHP Trigger: TGGATGGCGGTCCAGAGGCTTACTGGCGCGCCCTCAGTCAGGAAGGAGAGGTAGACTTCCTGTCCTCAGCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050374.3 ENSMUST00000160942.8 |
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| CDS CCA 72 bp | CTGCTGGGCCCTGAAGATGTGGACAGACTCTGGTTGTaGGCATTGCTGCCGGTCGACAGGCTGCTGAAGGGG | + |
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Preference number: 6 (lower is better) Translates to: LLGPEDVDRLWL*ALLPVDRLLKG Trigger: CCCCTTCAGCAGCCTGTCGACCGGCAGCAATGCCCACAACCAGAGTCTGTCCACATCTTCAGGGCCCAGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
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| CDS CCA 72 bp | AGGGGACTGCTGGGCCCTGAAGATGTGGACAGACTCTaGTTGTGGGCATTGCTGCCGGTCGACAGGCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: RGLLGPEDVDRL*LWALLPVDRLL Trigger: CAGCAGCCTGTCGACCGGCAGCAATGCCCACAACCAGAGTCTGTCCACATCTTCAGGGCCCAGCAGTCCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
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| CDS CAA 72 bp | GGCCCTGAAGATGTGGACAGACTCTGGTTGTGGGCATaGCTGCCGGTCGACAGGCTGCTGAAGGGGTTGGAG | + |
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Preference number: 6 (lower is better) Translates to: GPEDVDRLWLWA*LPVDRLLKGLE Trigger: CTCCAACCCCTTCAGCAGCCTGTCGACCGGCAGCAATGCCCACAACCAGAGTCTGTCCACATCTTCAGGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
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| CDS CCA 72 bp | GGGCTTCTCAGCCAAAGTCCAGGTGTGCAGCAGAGCTaGCTCACTGCCTTCCGAAGCCACAGGGAAGTAGGT | + |
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Preference number: 6 (lower is better) Translates to: GLLSQSPGVQQS*LTAFRSHREVG Trigger: ACCTACTTCCCTGTGGCTTCGGAAGGCAGTGAGCCAGCTCTGCTGCACACCTGGACTTTGGCTGAGAAGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050374.3 ENSMUST00000160942.8 |
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| CDS CCA 72 bp | CGACCAGCCTCGGGGACTTCAGACCCATCAGGGGCTTaGAGGAGGCGTAGAGGCGTCGAAATTCCTCATCAA | + |
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Preference number: 6 (lower is better) Translates to: RPASGTSDPSGA*RRRRGVEIPHQ Trigger: TTGATGAGGAATTTCGACGCCTCTACGCCTCCTCCAAGCCCCTGATGGGTCTGAAGTCCCCGAGGCTGGTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
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| CDS CCA 72 bp | CCGGGCGCTCTCATTATCACTGAAGTCAGCTCTGGCTaGCCGGGTCCACTGGTTCTTGACATCTTCCAGACG | + |
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Preference number: 6 (lower is better) Translates to: PGALIITEVSSG*PGPLVLDIFQT Trigger: CGTCTGGAAGATGTCAAGAACCAGTGGACCCGGCCAGCCAGAGCTGACTTCAGTGATAATGAGAGCGCCCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050374.3 ENSMUST00000160942.8 |
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| CDS CCA 72 bp | TTGTCACACATCTCCTGGAAGAGCTTCACCCCGCCCTaGTCCAGAAGCACACAGACGAATACCCCGCGCTTG | + |
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Preference number: 6 (lower is better) Translates to: LSHISWKSFTPP*SRSTQTNTPRL Trigger: CAAGCGCGGGGTATTCGTCTGTGTGCTTCTGGACCAGGGCGGGGTGAAGCTCTTCCAGGAGATGTGTGACAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050374.3 ENSMUST00000160942.8 |
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| CDS CAA 90 bp | ACCCCGCCCTGGTCCAGAAGCACACAGACGAATACCCCGCGCTTGTaGGCTGCCTCTAGAATGTCACAAAGGATCTCCACATCCGTGAAC | + |
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Preference number: 6 (lower is better) Translates to: TPPWSRSTQTNTPRL*AASRMSQRISTSVN Trigger: GTTCACGGATGTGGAGATCCTTTGTGACATTCTAGAGGCAGCCAACAAGCGCGGGGTATTCGTCTGTGTGCTTCTGGACCAGGGCGGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050374.3 ENSMUST00000160942.8 |
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| CDS CAA 90 bp | TTCACCCCGCCCTGGTCCAGAAGCACACAGACGAATACCCCGCGCTaGTTGGCTGCCTCTAGAATGTCACAAAGGATCTCCACATCCGTG | + |
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Preference number: 6 (lower is better) Translates to: FTPPWSRSTQTNTPR*LAASRMSQRISTSV Trigger: CACGGATGTGGAGATCCTTTGTGACATTCTAGAGGCAGCCAACAAGCGCGGGGTATTCGTCTGTGTGCTTCTGGACCAGGGCGGGGTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050374.3 ENSMUST00000160942.8 |
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| CDS CAA 90 bp | GGAGGCGTAGAGGCGTCGAAATTCCTCATCAAACAGCTCCACCGCTaGCCCCGTGAACTTGGAGAGGATGTTCCTGTGCACGTGTCCACA | + |
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Preference number: 6 (lower is better) Translates to: GGVEASKFLIKQLHR*PRELGEDVPVHVST Trigger: TGTGGACACGTGCACAGGAACATCCTCTCCAAGTTCACGGGGCAAGCGGTGGAGCTGTTTGATGAGGAATTTCGACGCCTCTACGCCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
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| CDS GCA 72 bp | CAGCCAAAGTCCAGGTGTGCAGCAGAGCTGGCTCACTaGCTTCCGAAGCCACAGGGAAGTAGGTACCTGATT | + |
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Preference number: 6 (lower is better) Translates to: QPKSRCAAELAH*LPKPQGSRYLI Trigger: AATCAGGTACCTACTTCCCTGTGGCTTCGGAAGGCAGTGAGCCAGCTCTGCTGCACACCTGGACTTTGGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050374.3 ENSMUST00000160942.8 |
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| CDS CAA 72 bp | CTGAAGTCAGCTCTGGCTGGCCGGGTCCACTGGTTCTaGACATCTTCCAGACGTTTCCGGATCTTGCCCACA | + |
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Preference number: 6 (lower is better) Translates to: LKSALAGRVHWF*TSSRRFRILPT Trigger: TGTGGGCAAGATCCGGAAACGTCTGGAAGATGTCAAGAACCAGTGGACCCGGCCAGCCAGAGCTGACTTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050374.3 ENSMUST00000160942.8 |
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| CDS GCA 72 bp | AGGCGTCGAAATTCCTCATCAAACAGCTCCACCGCTTaGCCCGTGAACTTGGAGAGGATGTTCCTGTGCACG | + |
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Preference number: 6 (lower is better) Translates to: RRRNSSSNSSTA*PVNLERMFLCT Trigger: CGTGCACAGGAACATCCTCTCCAAGTTCACGGGGCAAGCGGTGGAGCTGTTTGATGAGGAATTTCGACGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
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| CDS CAA 72 bp | CCCTGGTCCAGAAGCACACAGACGAATACCCCGCGCTaGTTGGCTGCCTCTAGAATGTCACAAAGGATCTCC | + |
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Preference number: 6 (lower is better) Translates to: PWSRSTQTNTPR*LAASRMSQRIS Trigger: GGAGATCCTTTGTGACATTCTAGAGGCAGCCAACAAGCGCGGGGTATTCGTCTGTGTGCTTCTGGACCAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050374.3 ENSMUST00000160942.8 |
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| CDS CAA 72 bp | GAGGCGTCGAAATTCCTCATCAAACAGCTCCACCGCTaGCCCCGTGAACTTGGAGAGGATGTTCCTGTGCAC | + |
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Preference number: 6 (lower is better) Translates to: EASKFLIKQLHR*PRELGEDVPVH Trigger: GTGCACAGGAACATCCTCTCCAAGTTCACGGGGCAAGCGGTGGAGCTGTTTGATGAGGAATTTCGACGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
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| CDS CAA 90 bp | CGTCGAAATTCCTCATCAAACAGCTCCACCGCTTGCCCCGTGAACTaGGAGAGGATGTTCCTGTGCACGTGTCCACAGAGCCAAGAGAAG | + |
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Preference number: 6 (lower is better) Translates to: RRNSSSNSSTACPVN*ERMFLCTCPQSQEK Trigger: CTTCTCTTGGCTCTGTGGACACGTGCACAGGAACATCCTCTCCAAGTTCACGGGGCAAGCGGTGGAGCTGTTTGATGAGGAATTTCGACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
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| CDS TCA 72 bp | GAAATTCCTCATCAAACAGCTCCACCGCTTGCCCCGTaGACTTGGAGAGGATGTTCCTGTGCACGTGTCCAC | + |
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Preference number: 6 (lower is better) Translates to: EIPHQTAPPLAP*TWRGCSCARVH Trigger: GTGGACACGTGCACAGGAACATCCTCTCCAAGTTCACGGGGCAAGCGGTGGAGCTGTTTGATGAGGAATTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
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| CDS GCA 72 bp | ACCGCTTGCCCCGTGAACTTGGAGAGGATGTTCCTGTaGACGTGTCCACAGAGCCAAGAGAAGCTGTATGAT | + |
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Preference number: 6 (lower is better) Translates to: TACPVNLERMFL*TCPQSQEKLYD Trigger: ATCATACAGCTTCTCTTGGCTCTGTGGACACGTGCACAGGAACATCCTCTCCAAGTTCACGGGGCAAGCGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160942.8 |
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| CDS CAA 90 bp | TCATTATCACTGAAGTCAGCTCTGGCTGGCCGGGTCCACTGGTTCTaGACATCTTCCAGACGTTTCCGGATCTTGCCCACATGCCTTGAC | + |
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Preference number: 6 (lower is better) Translates to: SLSLKSALAGRVHWF*TSSRRFRILPTCLD Trigger: GTCAAGGCATGTGGGCAAGATCCGGAAACGTCTGGAAGATGTCAAGAACCAGTGGACCCGGCCAGCCAGAGCTGACTTCAGTGATAATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050374.3 ENSMUST00000160942.8 |
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| CDS TCA 72 bp | CTGCCTCTAGAATGTCACAAAGGATCTCCACATCCGTaGACACATCCATCAGAATGGCCAGGACCTGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: LPLECHKGSPHP*THPSEWPGPGW Trigger: CCAGCCAGGTCCTGGCCATTCTGATGGATGTGTTCACGGATGTGGAGATCCTTTGTGACATTCTAGAGGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050374.3 ENSMUST00000160942.8 |
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| CDS CCA 72 bp | TTATCACTGAAGTCAGCTCTGGCTGGCCGGGTCCACTaGTTCTTGACATCTTCCAGACGTTTCCGGATCTTG | + |
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Preference number: 6 (lower is better) Translates to: LSLKSALAGRVH*FLTSSRRFRIL Trigger: CAAGATCCGGAAACGTCTGGAAGATGTCAAGAACCAGTGGACCCGGCCAGCCAGAGCTGACTTCAGTGATAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050374.3 ENSMUST00000160942.8 |
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| CDS CCA 72 bp | GGTCCAGAAGCACACAGACGAATACCCCGCGCTTGTTaGCTGCCTCTAGAATGTCACAAAGGATCTCCACAT | + |
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Preference number: 6 (lower is better) Translates to: GPEAHRRIPRAC*LPLECHKGSPH Trigger: ATGTGGAGATCCTTTGTGACATTCTAGAGGCAGCCAACAAGCGCGGGGTATTCGTCTGTGTGCTTCTGGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050374.3 ENSMUST00000160942.8 |
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| CDS CAA 72 bp | TGGTCCAGAAGCACACAGACGAATACCCCGCGCTTGTaGGCTGCCTCTAGAATGTCACAAAGGATCTCCACA | + |
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Preference number: 6 (lower is better) Translates to: WSRSTQTNTPRL*AASRMSQRIST Trigger: TGTGGAGATCCTTTGTGACATTCTAGAGGCAGCCAACAAGCGCGGGGTATTCGTCTGTGTGCTTCTGGACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050374.3 ENSMUST00000160942.8 |
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| CDS CAA 90 bp | GATGCAGCGGCGGACCAAATCTCTGATGTTGTTGTGTTTGTCCATTaGGAAGTAGATGGTGGCACTGGACTTTTCCTTCAGGTAGGGCTT | + |
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Preference number: 6 (lower is better) Translates to: DAAADQISDVVVFVH*EVDGGTGLFLQVGL Trigger: AAGCCCTACCTGAAGGAAAAGTCCAGTGCCACCATCTACTTCCAAATGGACAAACACAACAACATCAGAGATTTGGTCCGCCGCTGCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050374.3 ENSMUST00000160942.8 |
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| CDS CCA 72 bp | AACCTCCAGTCTGAGATGATGAACTTCTCTTGGATTTaGCCGGCAAATTTCCTGCCTGACTTGGCACAATAC | + |
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Preference number: 6 (lower is better) Translates to: NLQSEMMNFSWI*PANFLPDLAQY Trigger: GTATTGTGCCAAGTCAGGCAGGAAATTTGCCGGCCAAATCCAAGAGAAGTTCATCATCTCAGACTGGAGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050374.3 ENSMUST00000160942.8 |
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| CDS CCA 72 bp | AAGACAAACCTCCAGTCTGAGATGATGAACTTCTCTTaGATTTGGCCGGCAAATTTCCTGCCTGACTTGGCA | + |
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Preference number: 6 (lower is better) Translates to: KTNLQSEMMNFS*IWPANFLPDLA Trigger: TGCCAAGTCAGGCAGGAAATTTGCCGGCCAAATCCAAGAGAAGTTCATCATCTCAGACTGGAGGTTTGTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050374.3 ENSMUST00000160942.8 |
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