Pregenerated sensors for FAM81B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000109228Ensembl transcript IDs: ENSMUST00000208418.2
Found 65 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | TATTCATTTTCTTATTCACAACTTTTCCCAACAAACCCTTGCACCAGCTGCTGGACGGTGCGCTCCTGGTaGCTCAGCCTGTCTTCTAGC | + |
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Preference number: 4 (lower is better) Translates to: YSFSYSQLFPTNPCTSCWTVRSW*LSLSSS Trigger: GCTAGAAGACAGGCTGAGTCACCAGGAGCGCACCGT...CCAGCAGCTGGTGCAAGGGTTTGTTGGGAAAAGTTGTGAATAAGAAAATGAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208418.2 |
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| CDS-3UTR CCA 90 bp | ATATTCATTTTCTTATTCACAACTTTTCCCAACAAACCCTTGCACCAGCTGCTGAAGGGGGCCATCAGGTaGATCGGGCTGTTCTTCGGC | + |
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Preference number: 4 (lower is better) Translates to: IFIFLFTTFPNKPLHQLLKGAIR*IGLFFG Trigger: GCCGAAGAACAGCCCGATCCACCTGATGGCCCCCTT...CAGCAGCTGGTGCAAGGGTTTGTTGGGAAAAGTTGTGAATAAGAAAATGAATAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000208418.2 |
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| CDS-3UTR TCA 90 bp | TATTCATTTTCTTATTCACAACTTTTCCCAACAAACCCTTGCACCAGCTGCTGGAGCCTGTCTTCTAGCTaGCTTGTTTGGTTGCTTGGC | + |
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Preference number: 4 (lower is better) Translates to: YSFSYSQLFPTNPCTSCWSLSSS*LVWLLG Trigger: GCCAAGCAACCAAACAAGTCAGCTAGAAGACAGGCT...CCAGCAGCTGGTGCAAGGGTTTGTTGGGAAAAGTTGTGAATAAGAAAATGAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208418.2 |
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| CDS-3UTR GCA 90 bp | TTTCTTATTCACAACTTTTCCCAACAAACCCTTGCACCAGCTGCTGGAAAAGACGCTGACTTGTTTGGTTaGTTGGCATGGCAGGAAGAA | + |
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Preference number: 4 (lower is better) Translates to: FLIHNFSQQTLAPAAGKDADLFG*LAWQEE Trigger: TTCTTCCTGCCATGCCAAGCAACCAAACAAGTCAGC...GTCTTTTCCAGCAGCTGGTGCAAGGGTTTGTTGGGAAAAGTTGTGAATAAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208418.2 |
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| CDS-3UTR CCA 90 bp | TATTCATTTTCTTATTCACAACTTTTCCCAACAAACCCTTGCACCAGCTGCTGGTTTGGTTGCTTGGCATaGCAGGAAGAAAGGGGCAAC | + |
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Preference number: 4 (lower is better) Translates to: YSFSYSQLFPTNPCTSCWFGCLA*QEERGN Trigger: GTTGCCCCTTTCTTCCTGCCATGCCAAGCAACCAAA...CCAGCAGCTGGTGCAAGGGTTTGTTGGGAAAAGTTGTGAATAAGAAAATGAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000208418.2 |
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| CDS-3UTR TCA 90 bp | CTAAAGATATTCATTTTCTTATTCACAACTTTTCCCAACAAACCCTTGCACCAGTCTTTTCTTGGTCAATaGCTGAGCCAGGAAGGGGGC | + |
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Preference number: 4 (lower is better) Translates to: LKIFIFLFTTFPNKPLHQSFLGQ*LSQEGG Trigger: GCCCCCTTCCTGGCTCAGTCATTGACCAAGAAAAGA...CTGGTGCAAGGGTTTGTTGGGAAAAGTTGTGAATAAGAAAATGAATATCTTTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000208418.2 |
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| CDS-3UTR TCA 90 bp | TTTCTTATTCACAACTTTTCCCAACAAACCCTTGCACCAGCTGCTGGAAAAGACTTTGTTGGAGAGAATTaGGGGAGTCGTGGATTGATT | + |
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Preference number: 4 (lower is better) Translates to: FLIHNFSQQTLAPAAGKDFVGEN*GSRGLI Trigger: AATCAATCCACGACTCCCTCAATTCTCTCCAACAAA...GTCTTTTCCAGCAGCTGGTGCAAGGGTTTGTTGGGAAAAGTTGTGAATAAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000208418.2 |
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| CDS-3UTR GCA 90 bp | TATTCATTTTCTTATTCACAACTTTTCCCAACAAACCCTTGCACCAGCTGCTGGTTTAAATTTGAGGTGTaGTCAGAGGCAGAGGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: YSFSYSQLFPTNPCTSCWFKFEV*SEAEAS Trigger: AGAGGCCTCTGCCTCTGAGCACACCTCAAATTTAAA...CCAGCAGCTGGTGCAAGGGTTTGTTGGGAAAAGTTGTGAATAAGAAAATGAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208418.2 |
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| CDS-3UTR GCA 90 bp | TTTCTTATTCACAACTTTTCCCAACAAACCCTTGCACCAGCTGCTGGAAAAGACTTTTCCAGCTTTTCCTaGACAACCTTCAGACACTCA | + |
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Preference number: 4 (lower is better) Translates to: FLIHNFSQQTLAPAAGKDFSSFS*TTFRHS Trigger: TGAGTGTCTGAAGGTTGTGCAGGAAAAGCTGGAAAA...GTCTTTTCCAGCAGCTGGTGCAAGGGTTTGTTGGGAAAAGTTGTGAATAAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000208418.2 |
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| CDS-3UTR GCA 90 bp | TATTCATTTTCTTATTCACAACTTTTCCCAACAAACCCTTGCACCAGCTGCTGGCGGAAAGCTTCACAATaGTTGAATCACATCTGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: YSFSYSQLFPTNPCTSCWRKASQ*LNHIWL Trigger: TAGCCAGATGTGATTCAAGCATTGTGAAGCTTTCCG...CCAGCAGCTGGTGCAAGGGTTTGTTGGGAAAAGTTGTGAATAAGAAAATGAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208418.2 |
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| CDS-3UTR CCA 90 bp | TTTCTTATTCACAACTTTTCCCAACAAACCCTTGCACCAGCTGCTGGAAAAGACGATAGAAGAGAATGGTaGTCCTTCTTCTGGAATGAT | + |
|
Preference number: 4 (lower is better) Translates to: FLIHNFSQQTLAPAAGKDDRREW*SFFWND Trigger: ATCATTCCAGAAGAAGGACCACCATTCTCTTCTATC...GTCTTTTCCAGCAGCTGGTGCAAGGGTTTGTTGGGAAAAGTTGTGAATAAGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208418.2 |
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| CDS-3UTR TCA 90 bp | CTAAAGATATTCATTTTCTTATTCACAACTTTTCCCAACAAACCCTTGCACCAGAGCAAGTTCTTGCACTaGTTTCTCCATCTGTCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LKIFIFLFTTFPNKPLHQSKFLH*FLHLSA Trigger: TGCCGACAGATGGAGAAATCAGTGCAAGAACTTGCT...CTGGTGCAAGGGTTTGTTGGGAAAAGTTGTGAATAAGAAAATGAATATCTTTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208418.2 |
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| CDS-3UTR GCA 90 bp | TTTCTTATTCACAACTTTTCCCAACAAACCCTTGCACCAGCTGCTGGAAAAGACCACTTTATTTATTTCTaGCTCCTGTTTCTGGGAGTT | + |
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Preference number: 4 (lower is better) Translates to: FLIHNFSQQTLAPAAGKDHFIYF*LLFLGV Trigger: AACTCCCAGAAACAGGAGGCAGAAATAAATAAAGTG...GTCTTTTCCAGCAGCTGGTGCAAGGGTTTGTTGGGAAAAGTTGTGAATAAGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208418.2 |
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| CDS-3UTR CCA 90 bp | ATATTCATTTTCTTATTCACAACTTTTCCCAACAAACCCTTGCACCAGCTGCTGGTGATGGTCTGTATGTaGCTTTCTAGTAACTTCCTG | + |
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Preference number: 4 (lower is better) Translates to: IFIFLFTTFPNKPLHQLLVMVCM*LSSNFL Trigger: CAGGAAGTTACTAGAAAGCCACATACAGACCATCAC...CAGCAGCTGGTGCAAGGGTTTGTTGGGAAAAGTTGTGAATAAGAAAATGAATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208418.2 |
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| CDS-3UTR CCA 90 bp | TATTCATTTTCTTATTCACAACTTTTCCCAACAAACCCTTGCACCAGCTGCTGGAGGAGCTCAATGTTTTaGTTGAGTTTCTTGACGATG | + |
|
Preference number: 4 (lower is better) Translates to: YSFSYSQLFPTNPCTSCWRSSMF*LSFLTM Trigger: CATCGTCAAGAAACTCAACCAAAACATTGAGCTCCT...CCAGCAGCTGGTGCAAGGGTTTGTTGGGAAAAGTTGTGAATAAGAAAATGAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000208418.2 |
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| CDS-3UTR CCA 90 bp | CTAAAGATATTCATTTTCTTATTCACAACTTTTCCCAACAAACCCTTGCACCAGAGACACTCATTCATGTaGCTCAGGTGGTCTTTTCCG | + |
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Preference number: 4 (lower is better) Translates to: LKIFIFLFTTFPNKPLHQRHSFM*LRWSFP Trigger: CGGAAAAGACCACCTGAGCCACATGAATGAGTGTCT...CTGGTGCAAGGGTTTGTTGGGAAAAGTTGTGAATAAGAAAATGAATATCTTTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000208418.2 |
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| CDS-3UTR CCA 90 bp | TATTCATTTTCTTATTCACAACTTTTCCCAACAAACCCTTGCACCAGCTGCTGGGTTTTCTGTATTTGTTaGAGAGAATTGAGGGAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: YSFSYSQLFPTNPCTSCWVFCIC*RELRES Trigger: CGACTCCCTCAATTCTCTCCAACAAATACAGAAAAC...CCAGCAGCTGGTGCAAGGGTTTGTTGGGAAAAGTTGTGAATAAGAAAATGAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000208418.2 |
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| CDS-3UTR TCA 90 bp | TATTCATTTTCTTATTCACAACTTTTCCCAACAAACCCTTGCACCAGCTGCTGGTCTGTTTCTACTGAATaGAGGTGGATAGAAGAGAAT | + |
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Preference number: 4 (lower is better) Translates to: YSFSYSQLFPTNPCTSCWSVSTE*RWIEEN Trigger: ATTCTCTTCTATCCACCTTCATTCAGTAGAAACAGA...CCAGCAGCTGGTGCAAGGGTTTGTTGGGAAAAGTTGTGAATAAGAAAATGAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208418.2 |
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| CDS-3UTR GCA 90 bp | ATATTCATTTTCTTATTCACAACTTTTCCCAACAAACCCTTGCACCAGCTGCTGTTGATGTTTAGATCCTaGACTGCAAAGTTAGTTCCT | + |
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Preference number: 4 (lower is better) Translates to: IFIFLFTTFPNKPLHQLLLMFRS*TAKLVP Trigger: AGGAACTAACTTTGCAGTGCAGGATCTAAACATCAA...CAGCAGCTGGTGCAAGGGTTTGTTGGGAAAAGTTGTGAATAAGAAAATGAATAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208418.2 |
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| CDS-3UTR CCA 90 bp | CTAAAGATATTCATTTTCTTATTCACAACTTTTCCCAACAAACCCTTGCACCAGGTGGATAGAAGAGAATaGTGGTCCTTCTTCTGGAAT | + |
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Preference number: 4 (lower is better) Translates to: LKIFIFLFTTFPNKPLHQVDRRE*WSFFWN Trigger: ATTCCAGAAGAAGGACCACCATTCTCTTCTATCCAC...CTGGTGCAAGGGTTTGTTGGGAAAAGTTGTGAATAAGAAAATGAATATCTTTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208418.2 |
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| CDS-3UTR CCA 90 bp | TATTCATTTTCTTATTCACAACTTTTCCCAACAAACCCTTGCACCAGCTGCTGGTTTCTAGTAACTTCCTaGCAAGAGATTCTTCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: YSFSYSQLFPTNPCTSCWFLVTS*QEILLF Trigger: GAAAAGAAGAATCTCTTGCCAGGAAGTTACTAGAAA...CCAGCAGCTGGTGCAAGGGTTTGTTGGGAAAAGTTGTGAATAAGAAAATGAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000208418.2 |
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| CDS-3UTR CCA 90 bp | CTAAAGATATTCATTTTCTTATTCACAACTTTTCCCAACAAACCCTTGCACCAGTTCATGTGGCTCAGGTaGTCTTTTCCGTACTTGATA | + |
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Preference number: 4 (lower is better) Translates to: LKIFIFLFTTFPNKPLHQFMWLR*SFPYLI Trigger: TATCAAGTACGGAAAAGACCACCTGAGCCACATGAA...CTGGTGCAAGGGTTTGTTGGGAAAAGTTGTGAATAAGAAAATGAATATCTTTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000208418.2 |
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| CDS-3UTR TCA 90 bp | CTAAAGATATTCATTTTCTTATTCACAACTTTTCCCAACAAACCCTTGCACCAGTACATCTGTTTCTACTaGATGAAGGTGGATAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: LKIFIFLFTTFPNKPLHQYICFY*MKVDRR Trigger: TCTTCTATCCACCTTCATTCAGTAGAAACAGATGTA...CTGGTGCAAGGGTTTGTTGGGAAAAGTTGTGAATAAGAAAATGAATATCTTTAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208418.2 |
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| CDS-3UTR CCA 90 bp | CTAAAGATATTCATTTTCTTATTCACAACTTTTCCCAACAAACCCTTGCACCAGGAATTGAGGGAGTCGTaGATTGATTTAAATCCTGAT | + |
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Preference number: 4 (lower is better) Translates to: LKIFIFLFTTFPNKPLHQELRES*IDLNPD Trigger: ATCAGGATTTAAATCAATCCACGACTCCCTCAATTC...CTGGTGCAAGGGTTTGTTGGGAAAAGTTGTGAATAAGAAAATGAATATCTTTAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208418.2 |
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| CDS GCA 90 bp | TGCGCTCCTGGTGACTCAGCCTGTCTTCTAGCTGACTTGTTTGGTTaGTTGGCATGGCAGGAAGAAAGGGGCAACCCTTGTCAACATACT | + |
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Preference number: 5 (lower is better) Translates to: CAPGDSACLLADLFG*LAWQEERGNPCQHT Trigger: AGTATGTTGACAAGGGTTGCCCCTTTCTTCCTGCCATGCCAAGCAACCAAACAAGTCAGCTAGAAGACAGGCTGAGTCACCAGGAGCGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208418.2 |
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| CDS CCA 90 bp | GGTGACTCAGCCTGTCTTCTAGCTGACTTGTTTGGTTGCTTGGCATaGCAGGAAGAAAGGGGCAACCCTTGTCAACATACTCAACTAGAT | + |
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Preference number: 5 (lower is better) Translates to: GDSACLLADLFGCLA*QEERGNPCQHTQLD Trigger: ATCTAGTTGAGTATGTTGACAAGGGTTGCCCCTTTCTTCCTGCCATGCCAAGCAACCAAACAAGTCAGCTAGAAGACAGGCTGAGTCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208418.2 |
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| CDS GCA 90 bp | CCGCGAAGGTCTCCAACTCCTTGTATGTGTTTGATGTTTAGATCCTaGACTGCAAAGTTAGTTCCTGTGGTCACCTGGTCTCGGATTCTT | + |
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Preference number: 5 (lower is better) Translates to: PRRSPTPCMCLMFRS*TAKLVPVVTWSRIL Trigger: AAGAATCCGAGACCAGGTGACCACAGGAACTAACTTTGCAGTGCAGGATCTAAACATCAAACACATACAAGGAGTTGGAGACCTTCGCGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208418.2 |
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| CDS CCA 90 bp | CTTTCTAGTAACTTCCTGGCAAGAGATTCTTCTTTTCGAAACCCCTaGCTTCCGTGGAGGCAAGCAGAGATGTCCTCCTTGATTCGGAAA | + |
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Preference number: 5 (lower is better) Translates to: LSSNFLARDSSFRNP*LPWRQAEMSSLIRK Trigger: TTTCCGAATCAAGGAGGACATCTCTGCTTGCCTCCACGGAAGCCAGGGGTTTCGAAAAGAAGAATCTCTTGCCAGGAAGTTACTAGAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208418.2 |
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| CDS CCA 90 bp | TCTTGCACTGATTTCTCCATCTGTCGGCACTCATGTCTGATGAACTaGATGTCTCCGGAAAGCTTCACAATGCTTGAATCACATCTGGCT | + |
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Preference number: 5 (lower is better) Translates to: SCTDFSICRHSCLMN*MSPESFTMLESHLA Trigger: AGCCAGATGTGATTCAAGCATTGTGAAGCTTTCCGGAGACATCCAGTTCATCAGACATGAGTGCCGACAGATGGAGAAATCAGTGCAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208418.2 |
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| CDS GCA 90 bp | ACATCCAAGTTCTTAGAAATGGTTTCTAGGGCAGAAGCAAGTTCTTaGACTGATTTCTCCATCTGTCGGCACTCATGTCTGATGAACTGG | + |
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Preference number: 5 (lower is better) Translates to: TSKFLEMVSRAEASS*TDFSICRHSCLMNW Trigger: CCAGTTCATCAGACATGAGTGCCGACAGATGGAGAAATCAGTGCAAGAACTTGCTTCTGCCCTAGAAACCATTTCTAAGAACTTGGATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208418.2 |
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| CDS CCA 90 bp | ACCTGGTCTCGGATTCTTATTTGGTCTTCTAGGAGCTCAATGTTTTaGTTGAGTTTCTTGACGATGCTGGTGATGGTCTGTATGTGGCTT | + |
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Preference number: 5 (lower is better) Translates to: TWSRILIWSSRSSMF*LSFLTMLVMVCMWL Trigger: AAGCCACATACAGACCATCACCAGCATCGTCAAGAAACTCAACCAAAACATTGAGCTCCTAGAAGACCAAATAAGAATCCGAGACCAGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208418.2 |
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| CDS CCA 90 bp | ACTGCAAAGTTAGTTCCTGTGGTCACCTGGTCTCGGATTCTTATTTaGTCTTCTAGGAGCTCAATGTTTTGGTTGAGTTTCTTGACGATG | + |
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Preference number: 5 (lower is better) Translates to: TAKLVPVVTWSRILI*SSRSSMFWLSFLTM Trigger: CATCGTCAAGAAACTCAACCAAAACATTGAGCTCCTAGAAGACCAAATAAGAATCCGAGACCAGGTGACCACAGGAACTAACTTTGCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208418.2 |
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| CDS CCA 90 bp | TTGATGTTTAGATCCTGCACTGCAAAGTTAGTTCCTGTGGTCACCTaGTCTCGGATTCTTATTTGGTCTTCTAGGAGCTCAATGTTTTGG | + |
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Preference number: 5 (lower is better) Translates to: LMFRSCTAKLVPVVT*SRILIWSSRSSMFW Trigger: CCAAAACATTGAGCTCCTAGAAGACCAAATAAGAATCCGAGACCAGGTGACCACAGGAACTAACTTTGCAGTGCAGGATCTAAACATCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208418.2 |
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| CDS-3UTR CAA 90 bp | ATATTCATTTTCTTATTCACAACTTTTCCCAACAAACCCTTGCACCAGCTGCTGGACTTGTTTGGTTGCTaGGCATGGCAGGAAGAAAGG | + |
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Preference number: 5 (lower is better) Translates to: IFIFLFTTFPNKPLHQLLDLFGC*AWQEER Trigger: CCTTTCTTCCTGCCATGCCAAGCAACCAAACAAGTC...CAGCAGCTGGTGCAAGGGTTTGTTGGGAAAAGTTGTGAATAAGAAAATGAATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208418.2 |
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| CDS-3UTR CAA 90 bp | TTTCTTATTCACAACTTTTCCCAACAAACCCTTGCACCAGCTGCTGGAAAAGACATTTGTTGGAGAGAATaGAGGGAGTCGTGGATTGAT | + |
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Preference number: 5 (lower is better) Translates to: FLIHNFSQQTLAPAAGKDICWRE*RESWID Trigger: ATCAATCCACGACTCCCTCAATTCTCTCCAACAAAT...GTCTTTTCCAGCAGCTGGTGCAAGGGTTTGTTGGGAAAAGTTGTGAATAAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208418.2 |
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| CDS CCA 90 bp | ATGTTTTGGTTGAGTTTCTTGACGATGCTGGTGATGGTCTGTATGTaGCTTTCTAGTAACTTCCTGGCAAGAGATTCTTCTTTTCGAAAC | + |
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Preference number: 5 (lower is better) Translates to: MFWLSFLTMLVMVCM*LSSNFLARDSSFRN Trigger: GTTTCGAAAAGAAGAATCTCTTGCCAGGAAGTTACTAGAAAGCCACATACAGACCATCACCAGCATCGTCAAGAAACTCAACCAAAACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208418.2 |
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| CDS-3UTR CAA 90 bp | ATATTCATTTTCTTATTCACAACTTTTCCCAACAAACCCTTGCACCAGCTGCTGCAGGCAGAGAGGCACTaGTGTTTACATCTGTTTCTA | + |
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Preference number: 5 (lower is better) Translates to: IFIFLFTTFPNKPLHQLLQAERH*CLHLFL Trigger: TAGAAACAGATGTAAACACAAGTGCCTCTCTGCCTG...CAGCAGCTGGTGCAAGGGTTTGTTGGGAAAAGTTGTGAATAAGAAAATGAATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208418.2 |
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| CDS-3UTR CAA 90 bp | CTAAAGATATTCATTTTCTTATTCACAACTTTTCCCAACAAACCCTTGCACCAGGCAGAGATGTCCTCCTaGATTCGGAAAGCCTGTTCA | + |
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Preference number: 5 (lower is better) Translates to: LKIFIFLFTTFPNKPLHQAEMSS*IRKACS Trigger: TGAACAGGCTTTCCGAATCAAGGAGGACATCTCTGC...CTGGTGCAAGGGTTTGTTGGGAAAAGTTGTGAATAAGAAAATGAATATCTTTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208418.2 |
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| CDS-3UTR CAA 90 bp | TATTCATTTTCTTATTCACAACTTTTCCCAACAAACCCTTGCACCAGCTGCTGGAGCTCAATGTTTTGGTaGAGTTTCTTGACGATGCTG | + |
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Preference number: 5 (lower is better) Translates to: YSFSYSQLFPTNPCTSCWSSMFW*SFLTML Trigger: CAGCATCGTCAAGAAACTCAACCAAAACATTGAGCT...CCAGCAGCTGGTGCAAGGGTTTGTTGGGAAAAGTTGTGAATAAGAAAATGAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000208418.2 |
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| CDS-3UTR CAA 90 bp | TATTCATTTTCTTATTCACAACTTTTCCCAACAAACCCTTGCACCAGCTGCTGGACTCCTTGTATGTGTTaGATGTTTAGATCCTGCACT | + |
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Preference number: 5 (lower is better) Translates to: YSFSYSQLFPTNPCTSCWTPCMC*MFRSCT Trigger: AGTGCAGGATCTAAACATCAAACACATACAAGGAGT...CCAGCAGCTGGTGCAAGGGTTTGTTGGGAAAAGTTGTGAATAAGAAAATGAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208418.2 |
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| CDS-3UTR CAA 90 bp | ATATTCATTTTCTTATTCACAACTTTTCCCAACAAACCCTTGCACCAGCTGCTGAAAGCTTCACAATGCTaGAATCACATCTGGCTACTC | + |
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Preference number: 5 (lower is better) Translates to: IFIFLFTTFPNKPLHQLLKASQC*NHIWLL Trigger: GAGTAGCCAGATGTGATTCAAGCATTGTGAAGCTTT...CAGCAGCTGGTGCAAGGGTTTGTTGGGAAAAGTTGTGAATAAGAAAATGAATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208418.2 |
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| CDS-3UTR CAA 90 bp | CTAAAGATATTCATTTTCTTATTCACAACTTTTCCCAACAAACCCTTGCACCAGGGACCATCTTTAAATTaGAGGTGTGCTCAGAGGCAG | + |
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Preference number: 5 (lower is better) Translates to: LKIFIFLFTTFPNKPLHQGPSLN*RCAQRQ Trigger: CTGCCTCTGAGCACACCTCAAATTTAAAGATGGTCC...CTGGTGCAAGGGTTTGTTGGGAAAAGTTGTGAATAAGAAAATGAATATCTTTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208418.2 |
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| CDS-3UTR CAA 90 bp | TATTCATTTTCTTATTCACAACTTTTCCCAACAAACCCTTGCACCAGCTGCTGGTGTTTTCTGTATTTGTaGGAGAGAATTGAGGGAGTC | + |
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Preference number: 5 (lower is better) Translates to: YSFSYSQLFPTNPCTSCWCFLYL*ERIEGV Trigger: GACTCCCTCAATTCTCTCCAACAAATACAGAAAACA...CCAGCAGCTGGTGCAAGGGTTTGTTGGGAAAAGTTGTGAATAAGAAAATGAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000208418.2 |
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| CDS-3UTR CAA 90 bp | CTAAAGATATTCATTTTCTTATTCACAACTTTTCCCAACAAACCCTTGCACCAGTTTTGGTTGAGTTTCTaGACGATGCTGGTGATGGTC | + |
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Preference number: 5 (lower is better) Translates to: LKIFIFLFTTFPNKPLHQFWLSF*TMLVMV Trigger: GACCATCACCAGCATCGTCAAGAAACTCAACCAAAA...CTGGTGCAAGGGTTTGTTGGGAAAAGTTGTGAATAAGAAAATGAATATCTTTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000208418.2 |
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| CDS CAA 90 bp | AGGCTACGGTGCGCTCCTGGTGACTCAGCCTGTCTTCTAGCTGACTaGTTTGGTTGCTTGGCATGGCAGGAAGAAAGGGGCAACCCTTGT | + |
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Preference number: 6 (lower is better) Translates to: RLRCAPGDSACLLAD*FGCLAWQEERGNPC Trigger: ACAAGGGTTGCCCCTTTCTTCCTGCCATGCCAAGCAACCAAACAAGTCAGCTAGAAGACAGGCTGAGTCACCAGGAGCGCACCGTAGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208418.2 |
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| CDS CAA 72 bp | TGCGCTCCTGGTGACTCAGCCTGTCTTCTAGCTGACTaGTTTGGTTGCTTGGCATGGCAGGAAGAAAGGGGC | + |
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Preference number: 6 (lower is better) Translates to: CAPGDSACLLAD*FGCLAWQEERG Trigger: GCCCCTTTCTTCCTGCCATGCCAAGCAACCAAACAAGTCAGCTAGAAGACAGGCTGAGTCACCAGGAGCGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208418.2 |
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| CDS CAA 90 bp | GCTCCTGGTGACTCAGCCTGTCTTCTAGCTGACTTGTTTGGTTGCTaGGCATGGCAGGAAGAAAGGGGCAACCCTTGTCAACATACTCAA | + |
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Preference number: 6 (lower is better) Translates to: APGDSACLLADLFGC*AWQEERGNPCQHTQ Trigger: TTGAGTATGTTGACAAGGGTTGCCCCTTTCTTCCTGCCATGCCAAGCAACCAAACAAGTCAGCTAGAAGACAGGCTGAGTCACCAGGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208418.2 |
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| CDS CCA 72 bp | AACTTCCTGGCAAGAGATTCTTCTTTTCGAAACCCCTaGCTTCCGTGGAGGCAAGCAGAGATGTCCTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: NFLARDSSFRNP*LPWRQAEMSSL Trigger: CAAGGAGGACATCTCTGCTTGCCTCCACGGAAGCCAGGGGTTTCGAAAAGAAGAATCTCTTGCCAGGAAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208418.2 |
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| CDS CCA 72 bp | GCCTGTCTTCTAGCTGACTTGTTTGGTTGCTTGGCATaGCAGGAAGAAAGGGGCAACCCTTGTCAACATACT | + |
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Preference number: 6 (lower is better) Translates to: ACLLADLFGCLA*QEERGNPCQHT Trigger: AGTATGTTGACAAGGGTTGCCCCTTTCTTCCTGCCATGCCAAGCAACCAAACAAGTCAGCTAGAAGACAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208418.2 |
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| CDS CAA 72 bp | GTGGATCGGGCTGTTCTTCGGCAGGCAGAGAGGCACTaGTGTTTACATCTGTTTCTACTGAATGAAGGTGGA | + |
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Preference number: 6 (lower is better) Translates to: VDRAVLRQAERH*CLHLFLLNEGG Trigger: TCCACCTTCATTCAGTAGAAACAGATGTAAACACAAGTGCCTCTCTGCCTGCCGAAGAACAGCCCGATCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208418.2 |
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| CDS CAA 90 bp | CATCTGGCTACTCTTCCGCGAAGGTCTCCAACTCCTTGTATGTGTTaGATGTTTAGATCCTGCACTGCAAAGTTAGTTCCTGTGGTCACC | + |
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Preference number: 6 (lower is better) Translates to: HLATLPRRSPTPCMC*MFRSCTAKLVPVVT Trigger: GGTGACCACAGGAACTAACTTTGCAGTGCAGGATCTAAACATCAAACACATACAAGGAGTTGGAGACCTTCGCGGAAGAGTAGCCAGATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208418.2 |
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| CDS CCA 72 bp | AGATCCTGCACTGCAAAGTTAGTTCCTGTGGTCACCTaGTCTCGGATTCTTATTTGGTCTTCTAGGAGCTCA | + |
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Preference number: 6 (lower is better) Translates to: RSCTAKLVPVVT*SRILIWSSRSS Trigger: TGAGCTCCTAGAAGACCAAATAAGAATCCGAGACCAGGTGACCACAGGAACTAACTTTGCAGTGCAGGATCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208418.2 |
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| CDS CAA 72 bp | TGGTTGCTTGGCATGGCAGGAAGAAAGGGGCAACCCTaGTCAACATACTCAACTAGATCTGTAGCGTTCTTA | + |
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Preference number: 6 (lower is better) Translates to: WLLGMAGRKGQP*STYSTRSVAFL Trigger: TAAGAACGCTACAGATCTAGTTGAGTATGTTGACAAGGGTTGCCCCTTTCTTCCTGCCATGCCAAGCAACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208418.2 |
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| CDS CCA 72 bp | GATTTCTCCATCTGTCGGCACTCATGTCTGATGAACTaGATGTCTCCGGAAAGCTTCACAATGCTTGAATCA | + |
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Preference number: 6 (lower is better) Translates to: DFSICRHSCLMN*MSPESFTMLES Trigger: TGATTCAAGCATTGTGAAGCTTTCCGGAGACATCCAGTTCATCAGACATGAGTGCCGACAGATGGAGAAATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208418.2 |
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| CDS CCA 72 bp | TGCACAACCTTCAGACACTCATTCATGTGGCTCAGGTaGTCTTTTCCGTACTTGATAAACTGGTTTTCGGTC | + |
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Preference number: 6 (lower is better) Translates to: CTTFRHSFMWLR*SFPYLINWFSV Trigger: GACCGAAAACCAGTTTATCAAGTACGGAAAAGACCACCTGAGCCACATGAATGAGTGTCTGAAGGTTGTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208418.2 |
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| CDS GCA 72 bp | TCTCCAACTCCTTGTATGTGTTTGATGTTTAGATCCTaGACTGCAAAGTTAGTTCCTGTGGTCACCTGGTCT | + |
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Preference number: 6 (lower is better) Translates to: SPTPCMCLMFRS*TAKLVPVVTWS Trigger: AGACCAGGTGACCACAGGAACTAACTTTGCAGTGCAGGATCTAAACATCAAACACATACAAGGAGTTGGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208418.2 |
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| CDS CAA 72 bp | TGGTCTTCTAGGAGCTCAATGTTTTGGTTGAGTTTCTaGACGATGCTGGTGATGGTCTGTATGTGGCTTTCT | + |
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Preference number: 6 (lower is better) Translates to: WSSRSSMFWLSF*TMLVMVCMWLS Trigger: AGAAAGCCACATACAGACCATCACCAGCATCGTCAAGAAACTCAACCAAAACATTGAGCTCCTAGAAGACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208418.2 |
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| CDS CAA 72 bp | ACTCTTCCGCGAAGGTCTCCAACTCCTTGTATGTGTTaGATGTTTAGATCCTGCACTGCAAAGTTAGTTCCT | + |
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Preference number: 6 (lower is better) Translates to: TLPRRSPTPCMC*MFRSCTAKLVP Trigger: AGGAACTAACTTTGCAGTGCAGGATCTAAACATCAAACACATACAAGGAGTTGGAGACCTTCGCGGAAGAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208418.2 |
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| CDS CAA 72 bp | TTTCATGCTGATAATCTCCTCGGACCATCTTTAAATTaGAGGTGTGCTCAGAGGCAGAGGCCTCTATCTTTC | + |
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Preference number: 6 (lower is better) Translates to: FHADNLLGPSLN*RCAQRQRPLSF Trigger: GAAAGATAGAGGCCTCTGCCTCTGAGCACACCTCAAATTTAAAGATGGTCCGAGGAGATTATCAGCATGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208418.2 |
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| CDS CAA 90 bp | TGGTCTCGGATTCTTATTTGGTCTTCTAGGAGCTCAATGTTTTGGTaGAGTTTCTTGACGATGCTGGTGATGGTCTGTATGTGGCTTTCT | + |
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Preference number: 6 (lower is better) Translates to: WSRILIWSSRSSMFW*SFLTMLVMVCMWLS Trigger: AGAAAGCCACATACAGACCATCACCAGCATCGTCAAGAAACTCAACCAAAACATTGAGCTCCTAGAAGACCAAATAAGAATCCGAGACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208418.2 |
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| CDS CAA 90 bp | AGAGGTTCATTTCATGCTGATAATCTCCTCGGACCATCTTTAAATTaGAGGTGTGCTCAGAGGCAGAGGCCTCTATCTTTCCTAAAAGCT | + |
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Preference number: 6 (lower is better) Translates to: RGSFHADNLLGPSLN*RCAQRQRPLSFLKA Trigger: AGCTTTTAGGAAAGATAGAGGCCTCTGCCTCTGAGCACACCTCAAATTTAAAGATGGTCCGAGGAGATTATCAGCATGAAATGAACCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208418.2 |
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| CDS CCA 72 bp | TTGAGTTTCTTGACGATGCTGGTGATGGTCTGTATGTaGCTTTCTAGTAACTTCCTGGCAAGAGATTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: LSFLTMLVMVCM*LSSNFLARDSS Trigger: AGAAGAATCTCTTGCCAGGAAGTTACTAGAAAGCCACATACAGACCATCACCAGCATCGTCAAGAAACTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208418.2 |
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| CDS CCA 72 bp | TTAGTTCCTGTGGTCACCTGGTCTCGGATTCTTATTTaGTCTTCTAGGAGCTCAATGTTTTGGTTGAGTTTC | + |
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Preference number: 6 (lower is better) Translates to: LVPVVTWSRILI*SSRSSMFWLSF Trigger: GAAACTCAACCAAAACATTGAGCTCCTAGAAGACCAAATAAGAATCCGAGACCAGGTGACCACAGGAACTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208418.2 |
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| CDS CAA 90 bp | ATTCTTATTTGGTCTTCTAGGAGCTCAATGTTTTGGTTGAGTTTCTaGACGATGCTGGTGATGGTCTGTATGTGGCTTTCTAGTAACTTC | + |
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Preference number: 6 (lower is better) Translates to: ILIWSSRSSMFWLSF*TMLVMVCMWLSSNF Trigger: GAAGTTACTAGAAAGCCACATACAGACCATCACCAGCATCGTCAAGAAACTCAACCAAAACATTGAGCTCCTAGAAGACCAAATAAGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208418.2 |
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| CDS CAA 72 bp | ATTCTTATTTGGTCTTCTAGGAGCTCAATGTTTTGGTaGAGTTTCTTGACGATGCTGGTGATGGTCTGTATG | + |
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Preference number: 6 (lower is better) Translates to: ILIWSSRSSMFW*SFLTMLVMVCM Trigger: CATACAGACCATCACCAGCATCGTCAAGAAACTCAACCAAAACATTGAGCTCCTAGAAGACCAAATAAGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208418.2 |
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