Pregenerated sensors for FAM81A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032224Ensembl transcript IDs: ENSMUST00000034749.16, ENSMUST00000123206.8, ENSMUST00000141775.2
Found 132 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGGCACATGCACACCCTGGATGGGATCCGGAACATAGCCACGATGTaGCTGCAGAGCCATCTGGCTCTTAGCCCCACGTGCAGTCTCCTG | + |
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Preference number: 1 (lower is better) Translates to: WHMHTLDGIRNIATM*LQSHLALSPTCSLL Trigger: CAGGAGACTGCACGTGGGGCTAAGAGCCAGATGGCTCTGCAGCCACATCGTGGCTATGTTCCGGATCCCATCCAGGGTGTGCATGTGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
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| 3UTR CCA 90 bp | CCAAGCAGCCAGGGTGGAGGGTCCCTGCCACAGTGTCTTGTCACATaGTCGGCAACGTCTCGAATACCTGGCGGTATCACCAGCAGCTGT | + |
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Preference number: 1 (lower is better) Translates to: PSSQGGGSLPQCLVT*SATSRIPGGITSSC Trigger: ACAGCTGCTGGTGATACCGCCAGGTATTCGAGACGTTGCCGACCATGTGACAAGACACTGTGGCAGGGACCCTCCACCCTGGCTGCTTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
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| 3UTR CCA 90 bp | GTCAGTTGCTCTTTAAACTCCCCAAGTGACCCCAAGCAGCCAGGGTaGAGGGTCCCTGCCACAGTGTCTTGTCACATGGTCGGCAACGTC | + |
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Preference number: 1 (lower is better) Translates to: VSCSLNSPSDPKQPG*RVPATVSCHMVGNV Trigger: GACGTTGCCGACCATGTGACAAGACACTGTGGCAGGGACCCTCCACCCTGGCTGCTTGGGGTCACTTGGGGAGTTTAAAGAGCAACTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
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| 3UTR TCA 90 bp | GGTCAGGAGGTTGTTTGGTGTCAGTTGCTCTTTAAACTCCCCAAGTaGCCCCAAGCAGCCAGGGTGGAGGGTCCCTGCCACAGTGTCTTG | + |
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Preference number: 1 (lower is better) Translates to: GQEVVWCQLLFKLPK*PQAARVEGPCHSVL Trigger: CAAGACACTGTGGCAGGGACCCTCCACCCTGGCTGCTTGGGGTCACTTGGGGAGTTTAAAGAGCAACTGACACCAAACAACCTCCTGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
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| 3UTR CCA 90 bp | CTTAGACCCATGAGAGCGCATTTCTTGGCACATGCACACCCTGGATaGGATCCGGAACATAGCCACGATGTGGCTGCAGAGCCATCTGGC | + |
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Preference number: 1 (lower is better) Translates to: LRPMRAHFLAHAHPG*DPEHSHDVAAEPSG Trigger: GCCAGATGGCTCTGCAGCCACATCGTGGCTATGTTCCGGATCCCATCCAGGGTGTGCATGTGCCAAGAAATGCGCTCTCATGGGTCTAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
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| 3UTR CCA 90 bp | CACGAAGCATCGCTGACTTCTCCTAGGTGGGCAGATCCTCCTGCATaGAGACGAAACGATGTGTGGGGAGATGAAGAAATGCAGGATGGG | + |
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Preference number: 1 (lower is better) Translates to: HEASLTSPRWADPPA*RRNDVWGDEEMQDG Trigger: CCCATCCTGCATTTCTTCATCTCCCCACACATCGTTTCGTCTCCATGCAGGAGGATCTGCCCACCTAGGAGAAGTCAGCGATGCTTCGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
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| 3UTR TCA 90 bp | ACACAGGGAAAGAAGAAACCACACTGTCTGGTCACGAAGCATCGCTaGCTTCTCCTAGGTGGGCAGATCCTCCTGCATGGAGACGAAACG | + |
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Preference number: 1 (lower is better) Translates to: TQGKKKPHCLVTKHR*LLLGGQILLHGDET Trigger: CGTTTCGTCTCCATGCAGGAGGATCTGCCCACCTAGGAGAAGTCAGCGATGCTTCGTGACCAGACAGTGTGGTTTCTTCTTTCCCTGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
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| 3UTR GCA 90 bp | CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTCTCTCTCTCTGTaGCCTCACTTTAACACAGAAGTGCAAATGGCACAGGCTCAAGTC | + |
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Preference number: 1 (lower is better) Translates to: LSLSLSLSLSPSLSL*PHFNTEVQMAQAQV Trigger: GACTTGAGCCTGTGCCATTTGCACTTCTGTGTTAAAGTGAGGGCACAGAGAGAGAGAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
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| 3UTR TCA 90 bp | GTGGGCAGATCCTCCTGCATGGAGACGAAACGATGTGTGGGGAGATaGAGAAATGCAGGATGGGTACATGTTCCTCACATAACCTCTCAT | + |
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Preference number: 1 (lower is better) Translates to: VGRSSCMETKRCVGR*RNAGWVHVPHITSH Trigger: ATGAGAGGTTATGTGAGGAACATGTACCCATCCTGCATTTCTTCATCTCCCCACACATCGTTTCGTCTCCATGCAGGAGGATCTGCCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
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| 3UTR GCA 90 bp | CTCTCTCTCCCTCTCTCTCTCTGTGCCCTCACTTTAACACAGAAGTaGAAATGGCACAGGCTCAAGTCTTCAATGACTCAAACATGGCAA | + |
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Preference number: 1 (lower is better) Translates to: LSLPLSLCALTLTQK*KWHRLKSSMTQTWQ Trigger: TTGCCATGTTTGAGTCATTGAAGACTTGAGCCTGTGCCATTTGCACTTCTGTGTTAAAGTGAGGGCACAGAGAGAGAGAGGGAGAGAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
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| 3UTR GCA 90 bp | ATCCTCCTGCATGGAGACGAAACGATGTGTGGGGAGATGAAGAAATaGAGGATGGGTACATGTTCCTCACATAACCTCTCATGCATCCAA | + |
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Preference number: 1 (lower is better) Translates to: ILLHGDETMCGEMKK*RMGTCSSHNLSCIQ Trigger: TTGGATGCATGAGAGGTTATGTGAGGAACATGTACCCATCCTGCATTTCTTCATCTCCCCACACATCGTTTCGTCTCCATGCAGGAGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
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| 3UTR CCA 90 bp | CTCCCTCTCTCTCTCTGTGCCCTCACTTTAACACAGAAGTGCAAATaGCACAGGCTCAAGTCTTCAATGACTCAAACATGGCAACTGAAA | + |
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Preference number: 1 (lower is better) Translates to: LPLSLCALTLTQKCK*HRLKSSMTQTWQLK Trigger: TTTCAGTTGCCATGTTTGAGTCATTGAAGACTTGAGCCTGTGCCATTTGCACTTCTGTGTTAAAGTGAGGGCACAGAGAGAGAGAGGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
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| 3UTR CCA 90 bp | TTTGATTTTCCTGAGTCCTTGCACATGAGAGAGGAAAGGAAAGGATaGGGTGTTGTTCTTGGAACTTTTAAATGCTCCTGTTCTCTCTCT | + |
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Preference number: 1 (lower is better) Translates to: FDFPESLHMREERKG*GVVLGTFKCSCSLS Trigger: AGAGAGAGAACAGGAGCATTTAAAAGTTCCAAGAACAACACCCCATCCTTTCCTTTCCTCTCTCATGTGCAAGGACTCAGGAAAATCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
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| 3UTR CCA 90 bp | GGTCCCAAGAGTAGAATATTAGGTACTTTAGCAGCATATCTTACATaGGTCAACAGTAAGAGCCAGGTAGAATCTCAGTGTGGTTTATTC | + |
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Preference number: 1 (lower is better) Translates to: GPKSRILGTLAAYLT*VNSKSQVESQCGLF Trigger: GAATAAACCACACTGAGATTCTACCTGGCTCTTACTGTTGACCCATGTAAGATATGCTGCTAAAGTACCTAATATTCTACTCTTGGGACC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
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| 3UTR GCA 90 bp | ATGAAGAAATGCAGGATGGGTACATGTTCCTCACATAACCTCTCATaGATCCAAACTCAAATCAAAGTTTTCAAGGTCCCAAGAGTAGAA | + |
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Preference number: 1 (lower is better) Translates to: MKKCRMGTCSSHNLS*IQTQIKVFKVPRVE Trigger: TTCTACTCTTGGGACCTTGAAAACTTTGATTTGAGTTTGGATGCATGAGAGGTTATGTGAGGAACATGTACCCATCCTGCATTTCTTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
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| 3UTR TCA 90 bp | GCCACCATCCCATTATTAAATATATGGCTATCACTACACAGGTTGTaGGTGGTTTCAAAAATAGCTTTAAATAGTAAAAGCCGGTACCCC | + |
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Preference number: 1 (lower is better) Translates to: ATIPLLNIWLSLHRL*VVSKIALNSKSRYP Trigger: GGGGTACCGGCTTTTACTATTTAAAGCTATTTTTGAAACCACTCACAACCTGTGTAGTGATAGCCATATATTTAATAATGGGATGGTGGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
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| 3UTR-3UTR TCA 90 bp | CCAGGGTCAGCAGGTGTCCCCTGTCTCCTCCTCCCAAGTGTCCTGTGTGCTCACCGATGTGTGGGGAGATaGAGAAATGCAGGATGGGTA | + |
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Preference number: 2 (lower is better) Translates to: PGSAGVPCLLLPSVLCAHRCVGR*RNAGWV Trigger: TACCCATCCTGCATTTCTTCATCTCCCCACACATCG...GTGAGCACACAGGACACTTGGGAGGAGGAGACAGGGGACACCTGCTGACCCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
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| 3UTR-3UTR CCA 90 bp | CAGGTGTCCCCTGTCTCCTCCTCCCAAGTGTCCTGTGTGCTCACCCTTCCCCCTGAGGAAAGGAAAGGATaGGGTGTTGTTCTTGGAACT | + |
|
Preference number: 2 (lower is better) Translates to: QVSPVSSSQVSCVLTLPPEERKG*GVVLGT Trigger: AGTTCCAAGAACAACACCCCATCCTTTCCTTTCCTC...AGGGGGAAGGGTGAGCACACAGGACACTTGGGAGGAGGAGACAGGGGACACCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
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| 3UTR-3UTR GCA 90 bp | CCAGGGTCAGCAGGTGTCCCCTGTCTCCTCCTCCCAAGTGTCCTGTGTGCTCACACTTTAACACAGAAGTaGAAATGGCACAGGCTCAAG | + |
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Preference number: 2 (lower is better) Translates to: PGSAGVPCLLLPSVLCAHTLTQK*KWHRLK Trigger: CTTGAGCCTGTGCCATTTGCACTTCTGTGTTAAAGT...GTGAGCACACAGGACACTTGGGAGGAGGAGACAGGGGACACCTGCTGACCCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
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| 3UTR-3UTR GCA 90 bp | TCGAATACCTGGCGGTATCACCAGCAGCTGTGTCACCTGCTTACATCACCTGCTGCATTTCTTGGCACATaGACACCCTGGATGGGATCC | + |
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Preference number: 2 (lower is better) Translates to: SNTWRYHQQLCHLLTSPAAFLGT*TPWMGS Trigger: GGATCCCATCCAGGGTGTGCATGTGCCAAGAAATGC...AGCAGGTGATGTAAGCAGGTGACACAGCTGCTGGTGATACCGCCAGGTATTCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
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| 3UTR CAA 90 bp | AGGGCAGCTGATTCTCCTTTAAACTTTGGCGAGAAGAGTACTCCATaGTCTTCGCAGGATGGCTGGCCTCCCCATAGCACACAGAATCGC | + |
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Preference number: 2 (lower is better) Translates to: RAADSPLNFGEKSTP*SSQDGWPPHSTQNR Trigger: GCGATTCTGTGTGCTATGGGGAGGCCAGCCATCCTGCGAAGACAATGGAGTACTCTTCTCGCCAAAGTTTAAAGGAGAATCAGCTGCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
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| 3UTR-3UTR GCA 90 bp | TCAATGACTCAAACATGGCAACTGAAAATAAAACGCCTGCAAAGGTGCCGGGACGCTCTTAGCCCCACGTaGAGTCTCCTGTCAGGTCCT | + |
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Preference number: 2 (lower is better) Translates to: SMTQTWQLKIKRLQRCRDALSPT*SLLSGP Trigger: AGGACCTGACAGGAGACTGCACGTGGGGCTAAGAGC...GTCCCGGCACCTTTGCAGGCGTTTTATTTTCAGTTGCCATGTTTGAGTCATTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
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| 3UTR-3UTR CCA 90 bp | CCAGGGTCAGCAGGTGTCCCCTGTCTCCTCCTCCCAAGTGTCCTGTGTGCTCACTCAATGACTCAAACATaGCAACTGAAAATAAAACGC | + |
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Preference number: 2 (lower is better) Translates to: PGSAGVPCLLLPSVLCAHSMTQT*QLKIKR Trigger: GCGTTTTATTTTCAGTTGCCATGTTTGAGTCATTGA...GTGAGCACACAGGACACTTGGGAGGAGGAGACAGGGGACACCTGCTGACCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
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| 3UTR-3UTR TCA 90 bp | TCAATGACTCAAACATGGCAACTGAAAATAAAACGCCTGCAAAGGTGCCGGGACAAACGCTTAGACCCATaGGAGCGCATTTCTTGGCAC | + |
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Preference number: 2 (lower is better) Translates to: SMTQTWQLKIKRLQRCRDKRLDP*ERISWH Trigger: GTGCCAAGAAATGCGCTCTCATGGGTCTAAGCGTTT...GTCCCGGCACCTTTGCAGGCGTTTTATTTTCAGTTGCCATGTTTGAGTCATTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
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| 3UTR-3UTR TCA 90 bp | TGTTCCTCACATAACCTCTCATGCATCCAAACTCAAATCAAAGTTTTCAAGGTCTTCCATGAAGGATGCTaGGTGCGGCCCACCATGACA | + |
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Preference number: 2 (lower is better) Translates to: CSSHNLSCIQTQIKVFKVFHEGC*VRPTMT Trigger: TGTCATGGTGGGCCGCACTCAGCATCCTTCATGGAA...GACCTTGAAAACTTTGATTTGAGTTTGGATGCATGAGAGGTTATGTGAGGAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
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| 3UTR-3UTR TCA 90 bp | TCAATGACTCAAACATGGCAACTGAAAATAAAACGCCTGCAAAGGTGCCGGGACTCACTACACAGGTTGTaGGTGGTTTCAAAAATAGCT | + |
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Preference number: 2 (lower is better) Translates to: SMTQTWQLKIKRLQRCRDSLHRL*VVSKIA Trigger: AGCTATTTTTGAAACCACTCACAACCTGTGTAGTGA...GTCCCGGCACCTTTGCAGGCGTTTTATTTTCAGTTGCCATGTTTGAGTCATTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
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| 3UTR-3UTR GCA 90 bp | CACATAACCTCTCATGCATCCAAACTCAAATCAAAGTTTTCAAGGTCCCAAGAGCTTGGAACTTTTAAATaGTCCTGTTCTCTCTCTCTC | + |
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Preference number: 2 (lower is better) Translates to: HITSHASKLKSKFSRSQELGTFK*SCSLSL Trigger: GAGAGAGAGAGAACAGGAGCATTTAAAAGTTCCAAG...CTCTTGGGACCTTGAAAACTTTGATTTGAGTTTGGATGCATGAGAGGTTATGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
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| 3UTR CCA 72 bp | CACACCCTGGATGGGATCCGGAACATAGCCACGATGTaGCTGCAGAGCCATCTGGCTCTTAGCCCCACGTGC | + |
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Preference number: 3 (lower is better) Translates to: HTLDGIRNIATM*LQSHLALSPTC Trigger: GCACGTGGGGCTAAGAGCCAGATGGCTCTGCAGCCACATCGTGGCTATGTTCCGGATCCCATCCAGGGTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
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| 3UTR CCA 72 bp | CAGGGTGGAGGGTCCCTGCCACAGTGTCTTGTCACATaGTCGGCAACGTCTCGAATACCTGGCGGTATCACC | + |
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Preference number: 3 (lower is better) Translates to: QGGGSLPQCLVT*SATSRIPGGIT Trigger: GGTGATACCGCCAGGTATTCGAGACGTTGCCGACCATGTGACAAGACACTGTGGCAGGGACCCTCCACCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
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| 3UTR-3UTR CAA 90 bp | CCAGGGTCAGCAGGTGTCCCCTGTCTCCTCCTCCCAAGTGTCCTGTGTGCTCACGATTTTCCTGAGTCCTaGCACATGAGAGAGGAAAGG | + |
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Preference number: 3 (lower is better) Translates to: PGSAGVPCLLLPSVLCAHDFPES*HMREER Trigger: CCTTTCCTCTCTCATGTGCAAGGACTCAGGAAAATC...GTGAGCACACAGGACACTTGGGAGGAGGAGACAGGGGACACCTGCTGACCCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
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| 3UTR TCA 72 bp | GTTGTTTGGTGTCAGTTGCTCTTTAAACTCCCCAAGTaGCCCCAAGCAGCCAGGGTGGAGGGTCCCTGCCAC | + |
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Preference number: 3 (lower is better) Translates to: VVWCQLLFKLPK*PQAARVEGPCH Trigger: GTGGCAGGGACCCTCCACCCTGGCTGCTTGGGGTCACTTGGGGAGTTTAAAGAGCAACTGACACCAAACAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
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| 3UTR CCA 72 bp | TCTTTAAACTCCCCAAGTGACCCCAAGCAGCCAGGGTaGAGGGTCCCTGCCACAGTGTCTTGTCACATGGTC | + |
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Preference number: 3 (lower is better) Translates to: SLNSPSDPKQPG*RVPATVSCHMV Trigger: GACCATGTGACAAGACACTGTGGCAGGGACCCTCCACCCTGGCTGCTTGGGGTCACTTGGGGAGTTTAAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
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| 3UTR CCA 72 bp | ATGAGAGCGCATTTCTTGGCACATGCACACCCTGGATaGGATCCGGAACATAGCCACGATGTGGCTGCAGAG | + |
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Preference number: 3 (lower is better) Translates to: MRAHFLAHAHPG*DPEHSHDVAAE Trigger: CTCTGCAGCCACATCGTGGCTATGTTCCGGATCCCATCCAGGGTGTGCATGTGCCAAGAAATGCGCTCTCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
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| 3UTR-3UTR CAA 90 bp | CAGGTGTCCCCTGTCTCCTCCTCCCAAGTGTCCTGTGTGCTCACCCTTCCCCCTGATGGGGTGTTGTTCTaGGAACTTTTAAATGCTCCT | + |
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Preference number: 3 (lower is better) Translates to: QVSPVSSSQVSCVLTLPPDGVLF*ELLNAP Trigger: AGGAGCATTTAAAAGTTCCAAGAACAACACCCCATC...AGGGGGAAGGGTGAGCACACAGGACACTTGGGAGGAGGAGACAGGGGACACCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
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| 3UTR TCA 72 bp | CTCTCTGTCCATACAAAGGTGTGTGCAGCTATTCCATaGAGGATGCTGAGTGCGGCCCACCATGACAGCGAT | + |
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Preference number: 3 (lower is better) Translates to: LSVHTKVCAAIP*RMLSAAHHDSD Trigger: ATCGCTGTCATGGTGGGCCGCACTCAGCATCCTTCATGGAATAGCTGCACACACCTTTGTATGGACAGAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
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| 3UTR CCA 72 bp | TCGCTGACTTCTCCTAGGTGGGCAGATCCTCCTGCATaGAGACGAAACGATGTGTGGGGAGATGAAGAAATG | + |
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Preference number: 3 (lower is better) Translates to: SLTSPRWADPPA*RRNDVWGDEEM Trigger: CATTTCTTCATCTCCCCACACATCGTTTCGTCTCCATGCAGGAGGATCTGCCCACCTAGGAGAAGTCAGCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
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| 3UTR CCA 72 bp | TGGGCAGATCCTCCTGCATGGAGACGAAACGATGTGTaGGGAGATGAAGAAATGCAGGATGGGTACATGTTC | + |
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Preference number: 3 (lower is better) Translates to: WADPPAWRRNDV*GDEEMQDGYMF Trigger: GAACATGTACCCATCCTGCATTTCTTCATCTCCCCACACATCGTTTCGTCTCCATGCAGGAGGATCTGCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
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| 3UTR GCA 72 bp | TCTCTCTCTCTCTCTCTCTCTCCCTCTCTCTCTCTGTaGCCTCACTTTAACACAGAAGTGCAAATGGCACAG | + |
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Preference number: 3 (lower is better) Translates to: SLSLSLSPSLSL*PHFNTEVQMAQ Trigger: CTGTGCCATTTGCACTTCTGTGTTAAAGTGAGGGCACAGAGAGAGAGAGGGAGAGAGAGAGAGAGAGAGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
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| 3UTR TCA 72 bp | GGTGTTTTCAAGACTGAAGGTAAACGCTTAGACCCATaGGAGCGCATTTCTTGGCACATGCACACCCTGGAT | + |
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Preference number: 3 (lower is better) Translates to: GVFKTEGKRLDP*ERISWHMHTLD Trigger: ATCCAGGGTGTGCATGTGCCAAGAAATGCGCTCTCATGGGTCTAAGCGTTTACCTTCAGTCTTGAAAACACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
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| 3UTR-3UTR CAA 90 bp | TCGAATACCTGGCGGTATCACCAGCAGCTGTGTCACCTGCTTACATCACCTGCTTCCAAAATAGTAGTCTaGGCTAGAGCATCAAGCATT | + |
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Preference number: 3 (lower is better) Translates to: SNTWRYHQQLCHLLTSPASKIVV*ARASSI Trigger: AATGCTTGATGCTCTAGCCAAGACTACTATTTTGGA...AGCAGGTGATGTAAGCAGGTGACACAGCTGCTGGTGATACCGCCAGGTATTCGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
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| 3UTR TCA 72 bp | ATACAAAGGTGTGTGCAGCTATTCCATGAAGGATGCTaGGTGCGGCCCACCATGACAGCGATGAAATCATTA | + |
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Preference number: 3 (lower is better) Translates to: IQRCVQLFHEGC*VRPTMTAMKSL Trigger: TAATGATTTCATCGCTGTCATGGTGGGCCGCACTCAGCATCCTTCATGGAATAGCTGCACACACCTTTGTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
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| 3UTR GCA 72 bp | CCGTCTCCTCGCAGTATTACAAATGTAGTCTCGCTTTaGCTCTCTGTCCATACAAAGGTGTGTGCAGCTATT | + |
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Preference number: 3 (lower is better) Translates to: PSPRSITNVVSL*LSVHTKVCAAI Trigger: AATAGCTGCACACACCTTTGTATGGACAGAGAGGCAAAGCGAGACTACATTTGTAATACTGCGAGGAGACGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
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| 3UTR GCA 72 bp | CCTCTCTCTCTCTGTGCCCTCACTTTAACACAGAAGTaGAAATGGCACAGGCTCAAGTCTTCAATGACTCAA | + |
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Preference number: 3 (lower is better) Translates to: PLSLCALTLTQK*KWHRLKSSMTQ Trigger: TTGAGTCATTGAAGACTTGAGCCTGTGCCATTTGCACTTCTGTGTTAAAGTGAGGGCACAGAGAGAGAGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
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| 3UTR GCA 72 bp | CATGGAGACGAAACGATGTGTGGGGAGATGAAGAAATaGAGGATGGGTACATGTTCCTCACATAACCTCTCA | + |
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Preference number: 3 (lower is better) Translates to: HGDETMCGEMKK*RMGTCSSHNLS Trigger: TGAGAGGTTATGTGAGGAACATGTACCCATCCTGCATTTCTTCATCTCCCCACACATCGTTTCGTCTCCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
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| 3UTR CCA 72 bp | TCTCTCTGTGCCCTCACTTTAACACAGAAGTGCAAATaGCACAGGCTCAAGTCTTCAATGACTCAAACATGG | + |
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Preference number: 3 (lower is better) Translates to: SLCALTLTQKCK*HRLKSSMTQTW Trigger: CCATGTTTGAGTCATTGAAGACTTGAGCCTGTGCCATTTGCACTTCTGTGTTAAAGTGAGGGCACAGAGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
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| 3UTR TCA 72 bp | AAGCTGAACTCTACCAGGACTTCTCTTAATGTAGGGTaGGGGGCAATACATACCTGTAGCAACTCATTCACT | + |
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Preference number: 3 (lower is better) Translates to: KLNSTRTSLNVG*GAIHTCSNSFT Trigger: AGTGAATGAGTTGCTACAGGTATGTATTGCCCCTCACCCTACATTAAGAGAAGTCCTGGTAGAGTTCAGCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
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| 3UTR-3UTR CAA 90 bp | TTTCAAGGTCCCAAGAGTAGAATATTAGGTACTTTAGCAGCATATCTTACATGGATGAGAGCGCATTTCTaGGCACATGCACACCCTGGA | + |
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Preference number: 3 (lower is better) Translates to: FQGPKSRILGTLAAYLTWMRAHF*AHAHPG Trigger: TCCAGGGTGTGCATGTGCCAAGAAATGCGCTCTCAT...CCATGTAAGATATGCTGCTAAAGTACCTAATATTCTACTCTTGGGACCTTGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
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| 3UTR GCA 72 bp | TGCAGGATGGGTACATGTTCCTCACATAACCTCTCATaGATCCAAACTCAAATCAAAGTTTTCAAGGTCCCA | + |
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Preference number: 3 (lower is better) Translates to: CRMGTCSSHNLS*IQTQIKVFKVP Trigger: TGGGACCTTGAAAACTTTGATTTGAGTTTGGATGCATGAGAGGTTATGTGAGGAACATGTACCCATCCTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
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| 3UTR CCA 72 bp | AGTAGAATATTAGGTACTTTAGCAGCATATCTTACATaGGTCAACAGTAAGAGCCAGGTAGAATCTCAGTGT | + |
|
Preference number: 3 (lower is better) Translates to: SRILGTLAAYLT*VNSKSQVESQC Trigger: ACACTGAGATTCTACCTGGCTCTTACTGTTGACCCATGTAAGATATGCTGCTAAAGTACCTAATATTCTACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
||
| CDS-3UTR CCA 90 bp | CAGGTGTCCCCTGTCTCCTCCTCCCAAGTGTCCTGTGTGCTCACCCTTCCCCCTCCCAAGCCAGAGAGCTaGCGCATCTCCAGCGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: QVSPVSSSQVSCVLTLPPPKPES*RISSVF Trigger: AAAGACGCTGGAGATGCGCCAGCTCTCTGGCTTGGG...AGGGGGAAGGGTGAGCACACAGGACACTTGGGAGGAGGAGACAGGGGACACCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
||
| 3UTR CAA 72 bp | CAAGCAGCCAGGGTGGAGGGTCCCTGCCACAGTGTCTaGTCACATGGTCGGCAACGTCTCGAATACCTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: QAARVEGPCHSV*SHGRQRLEYLA Trigger: CGCCAGGTATTCGAGACGTTGCCGACCATGTGACAAGACACTGTGGCAGGGACCCTCCACCCTGGCTGCTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
||
| CDS-3UTR CCA 90 bp | CCAGGGTCAGCAGGTGTCCCCTGTCTCCTCCTCCCAAGTGTCCTGTGTGCTCACAGCCTGGCCGACATCTaGCTGAGTTTCTTCTCTACG | + |
|
Preference number: 4 (lower is better) Translates to: PGSAGVPCLLLPSVLCAHSLADI*LSFFST Trigger: CGTAGAGAAGAAACTCAGCCAGATGTCGGCCAGGCT...GTGAGCACACAGGACACTTGGGAGGAGGAGACAGGGGACACCTGCTGACCCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
||
| CDS-3UTR GCA 90 bp | CCAGGGTCAGCAGGTGTCCCCTGTCTCCTCCTCCCAAGTGTCCTGTGTGCTCACATATCCCGATTCAGTTaGTTCACAATGGCGGTTATG | + |
|
Preference number: 4 (lower is better) Translates to: PGSAGVPCLLLPSVLCAHISRFS*FTMAVM Trigger: CATAACCGCCATTGTGAAGCAACTGAATCGGGATAT...GTGAGCACACAGGACACTTGGGAGGAGGAGACAGGGGACACCTGCTGACCCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
||
| CDS-3UTR GCA 90 bp | TCGAATACCTGGCGGTATCACCAGCAGCTGTGTCACCTGCTTACATCACCTGCTGGCATGCTCCACCAGTaGTGCTGTGGTTTTCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: SNTWRYHQQLCHLLTSPAGMLHQ*CCGFLM Trigger: CATGAGAAAACCACAGCAGCACTGGTGGAGCATGCC...AGCAGGTGATGTAAGCAGGTGACACAGCTGCTGGTGATACCGCCAGGTATTCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
||
| CDS-3UTR GCA 90 bp | TCGAATACCTGGCGGTATCACCAGCAGCTGTGTCACCTGCTTACATCACCTGCTTCCCTGGCACGGATCTaGTCCTGGAGAACCTCAATA | + |
|
Preference number: 4 (lower is better) Translates to: SNTWRYHQQLCHLLTSPASLARI*SWRTSI Trigger: TATTGAGGTTCTCCAGGAGCAGATCCGTGCCAGGGA...AGCAGGTGATGTAAGCAGGTGACACAGCTGCTGGTGATACCGCCAGGTATTCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
||
| CDS-3UTR TCA 90 bp | TCGAATACCTGGCGGTATCACCAGCAGCTGTGTCACCTGCTTACATCACCTGCTGCTGTGGTTTTCTCATaGCAGAGGATCCTGTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SNTWRYHQQLCHLLTSPAAVVFS*QRILSS Trigger: GGAAGACAGGATCCTCTGTCATGAGAAAACCACAGC...AGCAGGTGATGTAAGCAGGTGACACAGCTGCTGGTGATACCGCCAGGTATTCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
||
| CDS-3UTR CCA 90 bp | TTACATAGGATCTCAGTCTTACACCACAACCCTGATGTGTTTACCACACTGTCTGCCATGGTCAGGGACTaGCTGTGTCGGGGCATGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LHRISVLHHNPDVFTTLSAMVRD*LCRGMV Trigger: GACCATGCCCCGACACAGCCAGTCCCTGACCATGGC...AGACAGTGTGGTAAACACATCAGGGTTGTGGTGTAAGACTGAGATCCTATGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
||
| CDS-3UTR CCA 90 bp | TGTTCCTCACATAACCTCTCATGCATCCAAACTCAAATCAAAGTTTTCAAGGTCGCTCGGCAGAGAGCCTaGCTATGCTGGCGTCGCACC | + |
|
Preference number: 4 (lower is better) Translates to: CSSHNLSCIQTQIKVFKVARQRA*LCWRRT Trigger: GGTGCGACGCCAGCATAGCCAGGCTCTCTGCCGAGC...GACCTTGAAAACTTTGATTTGAGTTTGGATGCATGAGAGGTTATGTGAGGAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
||
| CDS-3UTR CCA 90 bp | AATCCAGATGTGGACTTAAAGCTGAACTCTACCAGGACTTCTCTTAATGTAGGGAGGAGCTGGAGCTGGTaGTTGCTGTCCCTGTGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: NPDVDLKLNSTRTSLNVGRSWSW*LLSLWD Trigger: GTCCCACAGGGACAGCAACCACCAGCTCCAGCTCCT...CCCTACATTAAGAGAAGTCCTGGTAGAGTTCAGCTTTAAGTCCACATCTGGATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
||
| 3UTR CAA 72 bp | GATTCTCCTTTAAACTTTGGCGAGAAGAGTACTCCATaGTCTTCGCAGGATGGCTGGCCTCCCCATAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: DSPLNFGEKSTP*SSQDGWPPHST Trigger: TGTGCTATGGGGAGGCCAGCCATCCTGCGAAGACAATGGAGTACTCTTCTCGCCAAAGTTTAAAGGAGAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
||
| CDS-3UTR GCA 90 bp | CTCCTGCATGGAGACGAAACGATGTGTGGGGAGATGAAGAAATGCAGGATGGGTCAGGATAAGCTTGGCTaGTTGCTGTTCCTTGTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LLHGDETMCGEMKKCRMGQDKLG*LLFLVQ Trigger: TTGAACAAGGAACAGCAAGCAGCCAAGCTTATCCTG...ACCCATCCTGCATTTCTTCATCTCCCCACACATCGTTTCGTCTCCATGCAGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
||
| 3UTR CAA 72 bp | CCCGTCTCCTCGCAGTATTACAAATGTAGTCTCGCTTaGCCTCTCTGTCCATACAAAGGTGTGTGCAGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: PVSSQYYKCSLA*PLCPYKGVCSY Trigger: ATAGCTGCACACACCTTTGTATGGACAGAGAGGCAAAGCGAGACTACATTTGTAATACTGCGAGGAGACGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
||
| CDS-3UTR TCA 90 bp | AATCCAGATGTGGACTTAAAGCTGAACTCTACCAGGACTTCTCTTAATGTAGGGTGCTGGATCTGCTTCTaGAGTTGGTCCCTGTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: NPDVDLKLNSTRTSLNVGCWICF*SWSLSS Trigger: GCTGGACAGGGACCAACTTCAGAAGCAGATCCAGCA...CCCTACATTAAGAGAAGTCCTGGTAGAGTTCAGCTTTAAGTCCACATCTGGATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
||
| CDS-3UTR GCA 90 bp | GGAGACGAAACGATGTGTGGGGAGATGAAGAAATGCAGGATGGGTACATGTTCCATAAGCTTGGCTGCTTaGTGTTCCTTGTTCAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: GDETMCGEMKKCRMGTCSISLAA*CSLFKC Trigger: GCACTTGAACAAGGAACAGCAAGCAGCCAAGCTTAT...GGAACATGTACCCATCCTGCATTTCTTCATCTCCCCACACATCGTTTCGTCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
||
| CDS-3UTR CCA 90 bp | TCAATGACTCAAACATGGCAACTGAAAATAAAACGCCTGCAAAGGTGCCGGGACCCACCAGTGCTGCTGTaGTTTTCTCATGACAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SMTQTWQLKIKRLQRCRDPPVLL*FSHDRG Trigger: TCCTCTGTCATGAGAAAACCACAGCAGCACTGGTGG...GTCCCGGCACCTTTGCAGGCGTTTTATTTTCAGTTGCCATGTTTGAGTCATTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
||
| CDS-3UTR CCA 90 bp | TCAATGACTCAAACATGGCAACTGAAAATAAAACGCCTGCAAAGGTGCCGGGACTGCTCTGCTCTGAGATaGACAAGTCCACTCTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SMTQTWQLKIKRLQRCRDCSALR*TSPLCS Trigger: TGAGCAGAGTGGACTTGTCCATCTCAGAGCAGAGCA...GTCCCGGCACCTTTGCAGGCGTTTTATTTTCAGTTGCCATGTTTGAGTCATTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
||
| CDS-3UTR CCA 90 bp | TGTTCCTCACATAACCTCTCATGCATCCAAACTCAAATCAAAGTTTTCAAGGTCTCCAGGAGCTGGAGCTaGTGGTTGCTGTCCCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: CSSHNLSCIQTQIKVFKVSRSWS*WLLSLW Trigger: CCACAGGGACAGCAACCACCAGCTCCAGCTCCTGGA...GACCTTGAAAACTTTGATTTGAGTTTGGATGCATGAGAGGTTATGTGAGGAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
||
| CDS-3UTR GCA 90 bp | TGTTCCTCACATAACCTCTCATGCATCCAAACTCAAATCAAAGTTTTCAAGGTCGCTGGAGCTGGTGGTTaGTGTCCCTGTGGGACATCT | + |
|
Preference number: 4 (lower is better) Translates to: CSSHNLSCIQTQIKVFKVAGAGG*CPCGTS Trigger: AGATGTCCCACAGGGACAGCAACCACCAGCTCCAGC...GACCTTGAAAACTTTGATTTGAGTTTGGATGCATGAGAGGTTATGTGAGGAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
||
| CDS-3UTR CCA 90 bp | GGTACATGTTCCTCACATAACCTCTCATGCATCCAAACTCAAATCAAAGTTTTCCTTCCAAGAACAGCCTaGCTAAGCGGTCACCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: GTCSSHNLSCIQTQIKVFLPRTA*LSGHLP Trigger: GGGGAGGTGACCGCTTAGCCAGGCTGTTCTTGGAAG...GAAAACTTTGATTTGAGTTTGGATGCATGAGAGGTTATGTGAGGAACATGTACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
||
| CDS-3UTR CCA 90 bp | TTACATAGGATCTCAGTCTTACACCACAACCCTGATGTGTTTACCACACTGTCTGCACGGATCTGCTCCTaGAGAACCTCAATATCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: LHRISVLHHNPDVFTTLSARICS*RTSISR Trigger: TCGGGATATTGAGGTTCTCCAGGAGCAGATCCGTGC...AGACAGTGTGGTAAACACATCAGGGTTGTGGTGTAAGACTGAGATCCTATGTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
||
| CDS-3UTR TCA 90 bp | AATCCAGATGTGGACTTAAAGCTGAACTCTACCAGGACTTCTCTTAATGTAGGGTTTGGTGCTCTGCTCTaGGATGGACAAGTCCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: NPDVDLKLNSTRTSLNVGFGALL*DGQVHS Trigger: AGAGTGGACTTGTCCATCTCAGAGCAGAGCACCAAA...CCCTACATTAAGAGAAGTCCTGGTAGAGTTCAGCTTTAAGTCCACATCTGGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
||
| CDS-3UTR GCA 90 bp | TGTTCCTCACATAACCTCTCATGCATCCAAACTCAAATCAAAGTTTTCAAGGTCCGCTCCTGTTCTTGTTaGAGCCAACTCCGTGCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: CSSHNLSCIQTQIKVFKVRSCSC*SQLRAD Trigger: GTCTGCACGGAGTTGGCTGCAACAAGAACAGGAGCG...GACCTTGAAAACTTTGATTTGAGTTTGGATGCATGAGAGGTTATGTGAGGAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
||
| CDS-3UTR CCA 90 bp | AAATCATTAGGATGCTTAAAATTACATAGGATCTCAGTCTTACACCACAACCCTGGCTGTGTCGGGGCATaGTCTTCACTCGCCTTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: KSLGCLKLHRISVLHHNPGCVGA*SSLALD Trigger: ATCTAAGGCGAGTGAAGACCATGCCCCGACACAGCC...AGGGTTGTGGTGTAAGACTGAGATCCTATGTAATTTTAAGCATCCTAATGATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
||
| CDS-3UTR CCA 90 bp | CACATAACCTCTCATGCATCCAAACTCAAATCAAAGTTTTCAAGGTCCCAAGAGCGTGCAGACAAAATCTaGTTGCTGAGCTCTTCAACG | + |
|
Preference number: 4 (lower is better) Translates to: HITSHASKLKSKFSRSQERADKI*LLSSST Trigger: CGTTGAAGAGCTCAGCAACCAGATTTTGTCTGCACG...CTCTTGGGACCTTGAAAACTTTGATTTGAGTTTGGATGCATGAGAGGTTATGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
||
| CDS-3UTR TCA 90 bp | TTACATAGGATCTCAGTCTTACACCACAACCCTGATGTGTTTACCACACTGTCTTCAGCATTCCTCTTCTaGCTCTCTTCGATTTTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LHRISVLHHNPDVFTTLSSAFLF*LSSILS Trigger: TGACAAAATCGAAGAGAGTCAGAAGAGGAATGCTGA...AGACAGTGTGGTAAACACATCAGGGTTGTGGTGTAAGACTGAGATCCTATGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
||
| CDS-3UTR GCA 90 bp | GGTACATGTTCCTCACATAACCTCTCATGCATCCAAACTCAAATCAAAGTTTTCCCTCCCCCTTTATTCTaGATCTTCTGCAAACTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GTCSSHNLSCIQTQIKVFPPPLF*IFCKLL Trigger: CAGCAGTTTGCAGAAGATGCAGAATAAAGGGGGAGG...GAAAACTTTGATTTGAGTTTGGATGCATGAGAGGTTATGTGAGGAACATGTACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
||
| CDS-3UTR CCA 90 bp | TTTCAAGGTCCCAAGAGTAGAATATTAGGTACTTTAGCAGCATATCTTACATGGTGGTTGCTGTCCCTGTaGGACATCTTCAGTTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: FQGPKSRILGTLAAYLTWWLLSL*DIFSLV Trigger: CACCAAACTGAAGATGTCCCACAGGGACAGCAACCA...CCATGTAAGATATGCTGCTAAAGTACCTAATATTCTACTCTTGGGACCTTGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
||
| 3UTR CAA 72 bp | AAGCCGGTACCCCTAGGTGGATATAAATATCGTGCCTaGTGGGATCTAGATAAACGTTGTAAGTTTCTACTT | + |
|
Preference number: 4 (lower is better) Translates to: KPVPLGGYKYRA*WDLDKRCKFLL Trigger: AAGTAGAAACTTACAACGTTTATCTAGATCCCACAAGGCACGATATTTATATCCACCTAGGGGTACCGGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
||
| CDS-3UTR TCA 90 bp | TGTTCCTCACATAACCTCTCATGCATCCAAACTCAAATCAAAGTTTTCAAGGTCTGGCGGTTATGTTTCTaGTATGCTCTTCCAAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: CSSHNLSCIQTQIKVFKVWRLCF*YALPRT Trigger: TGTTCTTGGAAGAGCATATCAGAAACATAACCGCCA...GACCTTGAAAACTTTGATTTGAGTTTGGATGCATGAGAGGTTATGTGAGGAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
||
| CDS-3UTR GCA 90 bp | ATAAAAGCCTTTCAAAATCTGAGGGAATCGGGCTCAACTGCACTTAGGGAAATATTATTCTGCATCTTCTaGAAACTGCTGACGATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: IKAFQNLRESGSTALREILFCIF*KLLTMS Trigger: TGACATCGTCAGCAGTTTGCAGAAGATGCAGAATAA...TATTTCCCTAAGTGCAGTTGAGCCCGATTCCCTCAGATTTTGAAAGGCTTTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
||
| CDS-3UTR GCA 90 bp | TGTTCCTCACATAACCTCTCATGCATCCAAACTCAAATCAAAGTTTTCAAGGTCTGGACAAGTCCACTCTaGTCAAAAGCTGAGAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: CSSHNLSCIQTQIKVFKVWTSPL*SKAEKS Trigger: AGATTTCTCAGCTTTTGAGCAGAGTGGACTTGTCCA...GACCTTGAAAACTTTGATTTGAGTTTGGATGCATGAGAGGTTATGTGAGGAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
||
| CDS-3UTR GCA 90 bp | AAATCATTAGGATGCTTAAAATTACATAGGATCTCAGTCTTACACCACAACCCTACATCTTCAGTTTGGTaGTCTGCTCTGAGATGGACA | + |
|
Preference number: 4 (lower is better) Translates to: KSLGCLKLHRISVLHHNPTSSVW*SALRWT Trigger: TGTCCATCTCAGAGCAGAGCACCAAACTGAAGATGT...AGGGTTGTGGTGTAAGACTGAGATCCTATGTAATTTTAAGCATCCTAATGATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
||
| CDS-3UTR GCA 90 bp | AAATCATTAGGATGCTTAAAATTACATAGGATCTCAGTCTTACACCACAACCCTAGATGGTCTATTTTCTaGAGAAGTTCTTTCTCTATC | + |
|
Preference number: 4 (lower is better) Translates to: KSLGCLKLHRISVLHHNPRWSIF*RSSFSI Trigger: GATAGAGAAAGAACTTCTGCAGAAAATAGACCATCT...AGGGTTGTGGTGTAAGACTGAGATCCTATGTAATTTTAAGCATCCTAATGATTT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
||
| CDS-3UTR CAA 90 bp | CCAGGGTCAGCAGGTGTCCCCTGTCTCCTCCTCCCAAGTGTCCTGTGTGCTCACGATCTGCTTCTGAAGTaGGTCCCTGTCCAGCTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: PGSAGVPCLLLPSVLCAHDLLLK*VPVQLH Trigger: ATGAAGCTGGACAGGGACCAACTTCAGAAGCAGATC...GTGAGCACACAGGACACTTGGGAGGAGGAGACAGGGGACACCTGCTGACCCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
||
| CDS CCA 90 bp | GGAGCTGGAGCTGGTGGTTGCTGTCCCTGTGGGACATCTTCAGTTTaGTGCTCTGCTCTGAGATGGACAAGTCCACTCTGCTCAAAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: GAGAGGCCPCGTSSV*CSALRWTSPLCSKA Trigger: AGCTTTTGAGCAGAGTGGACTTGTCCATCTCAGAGCAGAGCACCAAACTGAAGATGTCCCACAGGGACAGCAACCACCAGCTCCAGCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
||
| CDS-3UTR CAA 90 bp | TCGAATACCTGGCGGTATCACCAGCAGCTGTGTCACCTGCTTACATCACCTGCTGCTGCTTGCTGTTCCTaGTTCAAGTGCTGGAGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: SNTWRYHQQLCHLLTSPAAACCS*FKCWSP Trigger: GGGACTCCAGCACTTGAACAAGGAACAGCAAGCAGC...AGCAGGTGATGTAAGCAGGTGACACAGCTGCTGGTGATACCGCCAGGTATTCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
||
| CDS TCA 90 bp | TTGATGCGGAAGGCATGCTCCACCAGTGCTGCTGTGGTTTTCTCATaGCAGAGGATCCTGTCTTCCAGCTGCTCCACCAGACTCACAGAA | + |
|
Preference number: 5 (lower is better) Translates to: LMRKACSTSAAVVFS*QRILSSSCSTRLTE Trigger: TTCTGTGAGTCTGGTGGAGCAGCTGGAAGACAGGATCCTCTGTCATGAGAAAACCACAGCAGCACTGGTGGAGCATGCCTTCCGCATCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034749.16 ENSMUST00000123206.8 ENSMUST00000141775.2 |
||
| CDS GCA 90 bp | GCTGACGATGTCATCTTTGATGCGGAAGGCATGCTCCACCAGTGCTaGTGTGGTTTTCTCATGACAGAGGATCCTGTCTTCCAGCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: ADDVIFDAEGMLHQC*CGFLMTEDPVFQLL Trigger: GAGCAGCTGGAAGACAGGATCCTCTGTCATGAGAAAACCACAGCAGCACTGGTGGAGCATGCCTTCCGCATCAAAGATGACATCGTCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034749.16 ENSMUST00000123206.8 ENSMUST00000141775.2 |
||
| CDS-3UTR CAA 90 bp | GGAGACGAAACGATGTGTGGGGAGATGAAGAAATGCAGGATGGGTACATGTTCCCTTGGCCTCCAGCACTaGTCTGAGGGACCCTATGCT | + |
|
Preference number: 5 (lower is better) Translates to: GDETMCGEMKKCRMGTCSLGLQH*SEGPYA Trigger: AGCATAGGGTCCCTCAGACAAGTGCTGGAGGCCAAG...GGAACATGTACCCATCCTGCATTTCTTCATCTCCCCACACATCGTTTCGTCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
||
| CDS TCA 90 bp | ACCTTCTCCTCGTCCGGCTTTCTCTGTCCTTCAGCATTCCTCTTCTaGCTCTCTTCGATTTTGTCAAGCCTGGCCGACATCTGGCTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: TFSSSGFLCPSAFLF*LSSILSSLADIWLS Trigger: ACTCAGCCAGATGTCGGCCAGGCTTGACAAAATCGAAGAGAGTCAGAAGAGGAATGCTGAAGGACAGAGAAAGCCGGACGAGGAGAAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
||
| CDS GCA 90 bp | ACTGCTGACGATGTCATCTTTGATGCGGAAGGCATGCTCCACCAGTaGTGCTGTGGTTTTCTCATGACAGAGGATCCTGTCTTCCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: TADDVIFDAEGMLHQ*CCGFLMTEDPVFQL Trigger: CAGCTGGAAGACAGGATCCTCTGTCATGAGAAAACCACAGCAGCACTGGTGGAGCATGCCTTCCGCATCAAAGATGACATCGTCAGCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034749.16 ENSMUST00000123206.8 ENSMUST00000141775.2 |
||
| CDS CCA 90 bp | AGCTCTTCAACGGTGCCTTTAAATTTAGTGTCCAGGAGCTGGAGCTaGTGGTTGCTGTCCCTGTGGGACATCTTCAGTTTGGTGCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SSSTVPLNLVSRSWS*WLLSLWDIFSLVLC Trigger: GCAGAGCACCAAACTGAAGATGTCCCACAGGGACAGCAACCACCAGCTCCAGCTCCTGGACACTAAATTTAAAGGCACCGTTGAAGAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
||
| CDS CCA 90 bp | TTAAATTTAGTGTCCAGGAGCTGGAGCTGGTGGTTGCTGTCCCTGTaGGACATCTTCAGTTTGGTGCTCTGCTCTGAGATGGACAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LNLVSRSWSWWLLSL*DIFSLVLCSEMDKS Trigger: GGACTTGTCCATCTCAGAGCAGAGCACCAAACTGAAGATGTCCCACAGGGACAGCAACCACCAGCTCCAGCTCCTGGACACTAAATTTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
||
| CDS CCA 90 bp | TCTTCAACGGTGCCTTTAAATTTAGTGTCCAGGAGCTGGAGCTGGTaGTTGCTGTCCCTGTGGGACATCTTCAGTTTGGTGCTCTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SSTVPLNLVSRSWSW*LLSLWDIFSLVLCS Trigger: AGAGCAGAGCACCAAACTGAAGATGTCCCACAGGGACAGCAACCACCAGCTCCAGCTCCTGGACACTAAATTTAAAGGCACCGTTGAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
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| CDS TCA 90 bp | CCTCAATATCCCGATTCAGTTGCTTCACAATGGCGGTTATGTTTCTaGTATGCTCTTCCAAGAACAGCCTGGCTAAGCGGTCACCTCCCC | + |
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Preference number: 5 (lower is better) Translates to: PQYPDSVASQWRLCF*YALPRTAWLSGHLP Trigger: GGGGAGGTGACCGCTTAGCCAGGCTGTTCTTGGAAGAGCATATCAGAAACATAACCGCCATTGTGAAGCAACTGAATCGGGATATTGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
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| CDS GCA 90 bp | CTGTCCTTCTGCGTCTTTGATTTTTGTTTCCAGGATAAGCTTGGCTaGTTGCTGTTCCTTGTTCAAGTGCTGGAGTCCCTCGTAGGTCGA | + |
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Preference number: 5 (lower is better) Translates to: LSFCVFDFCFQDKLG*LLFLVQVLESLVGR Trigger: TCGACCTACGAGGGACTCCAGCACTTGAACAAGGAACAGCAAGCAGCCAAGCTTATCCTGGAAACAAAAATCAAAGACGCAGAAGGACAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
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| CDS-3UTR CAA 90 bp | GGAGACGAAACGATGTGTGGGGAGATGAAGAAATGCAGGATGGGTACATGTTCCGATAAGCTTGGCTGCTaGCTGTTCCTTGTTCAAGTG | + |
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Preference number: 5 (lower is better) Translates to: GDETMCGEMKKCRMGTCSDKLGC*LFLVQV Trigger: CACTTGAACAAGGAACAGCAAGCAGCCAAGCTTATC...GGAACATGTACCCATCCTGCATTTCTTCATCTCCCCACACATCGTTTCGTCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
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| CDS GCA 90 bp | ATATCCCGATTCAGTTGCTTCACAATGGCGGTTATGTTTCTGATATaGTCTTCCAAGAACAGCCTGGCTAAGCGGTCACCTCCCCCTTTA | + |
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Preference number: 5 (lower is better) Translates to: ISRFSCFTMAVMFLI*SSKNSLAKRSPPPL Trigger: TAAAGGGGGAGGTGACCGCTTAGCCAGGCTGTTCTTGGAAGAGCATATCAGAAACATAACCGCCATTGTGAAGCAACTGAATCGGGATAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
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| CDS-3UTR CAA 90 bp | CTCCTGCATGGAGACGAAACGATGTGTGGGGAGATGAAGAAATGCAGGATGGGTAATATCCCGATTCAGTaGCTTCACAATGGCGGTTAT | + |
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Preference number: 5 (lower is better) Translates to: LLHGDETMCGEMKKCRMGNIPIQ*LHNGGY Trigger: ATAACCGCCATTGTGAAGCAACTGAATCGGGATATT...ACCCATCCTGCATTTCTTCATCTCCCCACACATCGTTTCGTCTCCATGCAGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
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| CDS-3UTR CAA 90 bp | GGTACATGTTCCTCACATAACCTCTCATGCATCCAAACTCAAATCAAAGTTTTCAGCTGGAGCTGGTGGTaGCTGTCCCTGTGGGACATC | + |
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Preference number: 5 (lower is better) Translates to: GTCSSHNLSCIQTQIKVFSWSWW*LSLWDI Trigger: GATGTCCCACAGGGACAGCAACCACCAGCTCCAGCT...GAAAACTTTGATTTGAGTTTGGATGCATGAGAGGTTATGTGAGGAACATGTACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
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| CDS-3UTR CAA 90 bp | AATCCAGATGTGGACTTAAAGCTGAACTCTACCAGGACTTCTCTTAATGTAGGGCTGTCCAGCTTCATCTaGGCCTCCAGCACTTGTCTG | + |
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Preference number: 5 (lower is better) Translates to: NPDVDLKLNSTRTSLNVGLSSFI*ASSTCL Trigger: CAGACAAGTGCTGGAGGCCAAGATGAAGCTGGACAG...CCCTACATTAAGAGAAGTCCTGGTAGAGTTCAGCTTTAAGTCCACATCTGGATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
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| CDS TCA 90 bp | TCTTCTGACTCTCTTCGATTTTGTCAAGCCTGGCCGACATCTGGCTaGGTTTCTTCTCTACGTCTCTTTCATTGGCTCCACTGTTTTCCT | + |
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Preference number: 5 (lower is better) Translates to: SSDSLRFCQAWPTSG*VSSLRLFHWLHCFP Trigger: AGGAAAACAGTGGAGCCAATGAAAGAGACGTAGAGAAGAAACTCAGCCAGATGTCGGCCAGGCTTGACAAAATCGAAGAGAGTCAGAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
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| CDS GCA 90 bp | TCTATTTTCTGCAGAAGTTCTTTCTCTATCCGCTCCTGTTCTTGTTaGAGCCAACTCCGTGCAGACAAAATCTGGTTGCTGAGCTCTTCA | + |
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Preference number: 5 (lower is better) Translates to: SIFCRSSFSIRSCSC*SQLRADKIWLLSSS Trigger: TGAAGAGCTCAGCAACCAGATTTTGTCTGCACGGAGTTGGCTGCAACAAGAACAGGAGCGGATAGAGAAAGAACTTCTGCAGAAAATAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
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| CDS-3UTR CAA 90 bp | AATCCAGATGTGGACTTAAAGCTGAACTCTACCAGGACTTCTCTTAATGTAGGGGTTTCCAGGATAAGCTaGGCTGCTTGCTGTTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: NPDVDLKLNSTRTSLNVGVSRIS*AACCSL Trigger: CAAGGAACAGCAAGCAGCCAAGCTTATCCTGGAAAC...CCCTACATTAAGAGAAGTCCTGGTAGAGTTCAGCTTTAAGTCCACATCTGGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
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| CDS-3UTR CAA 90 bp | TTACATAGGATCTCAGTCTTACACCACAACCCTGATGTGTTTACCACACTGTCTGCAGACAAAATCTGGTaGCTGAGCTCTTCAACGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LHRISVLHHNPDVFTTLSADKIW*LSSSTV Trigger: CACCGTTGAAGAGCTCAGCAACCAGATTTTGTCTGC...AGACAGTGTGGTAAACACATCAGGGTTGTGGTGTAAGACTGAGATCCTATGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
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| CDS-3UTR CAA 90 bp | TTTCAAGGTCCCAAGAGTAGAATATTAGGTACTTTAGCAGCATATCTTACATGGCCGCTCCTGTTCTTGTaGCAGCCAACTCCGTGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: FQGPKSRILGTLAAYLTWPLLFL*QPTPCR Trigger: TCTGCACGGAGTTGGCTGCAACAAGAACAGGAGCGG...CCATGTAAGATATGCTGCTAAAGTACCTAATATTCTACTCTTGGGACCTTGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
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| CDS GCA 90 bp | GCTCCACTGTTTTCCTTAACAATCAAGGAGAGATGGTCTATTTTCTaGAGAAGTTCTTTCTCTATCCGCTCCTGTTCTTGTTGCAGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: APLFSLTIKERWSIF*RSSFSIRSCSCCSQ Trigger: TTGGCTGCAACAAGAACAGGAGCGGATAGAGAAAGAACTTCTGCAGAAAATAGACCATCTCTCCTTGATTGTTAAGGAAAACAGTGGAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
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| CDS-3UTR CAA 90 bp | TTTCAAGGTCCCAAGAGTAGAATATTAGGTACTTTAGCAGCATATCTTACATGGTGGGACATCTTCAGTTaGGTGCTCTGCTCTGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: FQGPKSRILGTLAAYLTWWDIFS*VLCSEM Trigger: CATCTCAGAGCAGAGCACCAAACTGAAGATGTCCCA...CCATGTAAGATATGCTGCTAAAGTACCTAATATTCTACTCTTGGGACCTTGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
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| CDS-3UTR CAA 90 bp | AATCCAGATGTGGACTTAAAGCTGAACTCTACCAGGACTTCTCTTAATGTAGGGTCTACGTCTCTTTCATaGGCTCCACTGTTTTCCTTA | + |
|
Preference number: 5 (lower is better) Translates to: NPDVDLKLNSTRTSLNVGSTSLS*APLFSL Trigger: TAAGGAAAACAGTGGAGCCAATGAAAGAGACGTAGA...CCCTACATTAAGAGAAGTCCTGGTAGAGTTCAGCTTTAAGTCCACATCTGGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
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| CDS CCA 90 bp | TCTCTTTCATTGGCTCCACTGTTTTCCTTAACAATCAAGGAGAGATaGTCTATTTTCTGCAGAAGTTCTTTCTCTATCCGCTCCTGTTCT | + |
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Preference number: 5 (lower is better) Translates to: SLSLAPLFSLTIKER*SIFCRSSFSIRSCS Trigger: AGAACAGGAGCGGATAGAGAAAGAACTTCTGCAGAAAATAGACCATCTCTCCTTGATTGTTAAGGAAAACAGTGGAGCCAATGAAAGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
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| CDS-3UTR CAA 90 bp | TGTTCCTCACATAACCTCTCATGCATCCAAACTCAAATCAAAGTTTTCAAGGTCTGTCCTTCTGCGTCTTaGATTTTTGTTTCCAGGATA | + |
|
Preference number: 5 (lower is better) Translates to: CSSHNLSCIQTQIKVFKVCPSAS*IFVSRI Trigger: TATCCTGGAAACAAAAATCAAAGACGCAGAAGGACA...GACCTTGAAAACTTTGATTTGAGTTTGGATGCATGAGAGGTTATGTGAGGAACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
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| CDS GCA 72 bp | CTCGGCAGAGAGCCTGGCTATGCTGGCGTCGCACCTTaGAACTCTTCCTCGGAGATCTCCCAAGCCAGAGAG | + |
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Preference number: 6 (lower is better) Translates to: LGREPGYAGVAP*NSSSEISQARE Trigger: CTCTCTGGCTTGGGAGATCTCCGAGGAAGAGTTGCAAGGTGCGACGCCAGCATAGCCAGGCTCTCTGCCGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
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| CDS CCA 72 bp | GTCCCTCGTAGGTCGACTTATGCTCGGCAGAGAGCCTaGCTATGCTGGCGTCGCACCTTGCAACTCTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: VPRRSTYARQRA*LCWRRTLQLFL Trigger: GAGGAAGAGTTGCAAGGTGCGACGCCAGCATAGCCAGGCTCTCTGCCGAGCATAAGTCGACCTACGAGGGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
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| CDS TCA 72 bp | CCCTGTCCAGCTTCATCTTGGCCTCCAGCACTTGTCTaGGGGACCCTATGCTCTCATAGATGGCTGAGAACC | + |
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Preference number: 6 (lower is better) Translates to: PCPASSWPPALV*GTLCSHRWLRT Trigger: GGTTCTCAGCCATCTATGAGAGCATAGGGTCCCTCAGACAAGTGCTGGAGGCCAAGATGAAGCTGGACAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
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| CDS CAA 72 bp | CTCTGGCTTCTGCATCTGCTGGATCTGCTTCTGAAGTaGGTCCCTGTCCAGCTTCATCTTGGCCTCCAGCAC | + |
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Preference number: 6 (lower is better) Translates to: LWLLHLLDLLLK*VPVQLHLGLQH Trigger: GTGCTGGAGGCCAAGATGAAGCTGGACAGGGACCAACTTCAGAAGCAGATCCAGCAGATGCAGAAGCCAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
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| CDS CAA 90 bp | AGGAGCTGGAGCTGGTGGTTGCTGTCCCTGTGGGACATCTTCAGTTaGGTGCTCTGCTCTGAGATGGACAAGTCCACTCTGCTCAAAAGC | + |
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Preference number: 6 (lower is better) Translates to: RSWSWWLLSLWDIFS*VLCSEMDKSTLLKS Trigger: GCTTTTGAGCAGAGTGGACTTGTCCATCTCAGAGCAGAGCACCAAACTGAAGATGTCCCACAGGGACAGCAACCACCAGCTCCAGCTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
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| CDS TCA 72 bp | AAGGCATGCTCCACCAGTGCTGCTGTGGTTTTCTCATaGCAGAGGATCCTGTCTTCCAGCTGCTCCACCAGA | + |
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Preference number: 6 (lower is better) Translates to: KACSTSAAVVFS*QRILSSSCSTR Trigger: TCTGGTGGAGCAGCTGGAAGACAGGATCCTCTGTCATGAGAAAACCACAGCAGCACTGGTGGAGCATGCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034749.16 ENSMUST00000123206.8 ENSMUST00000141775.2 |
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| CDS CCA 72 bp | GCAACTCTTCCTCGGAGATCTCCCAAGCCAGAGAGCTaGCGCATCTCCAGCGTCTTTAAGGCAGAATTAGTT | + |
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Preference number: 6 (lower is better) Translates to: ATLPRRSPKPES*RISSVFKAELV Trigger: AACTAATTCTGCCTTAAAGACGCTGGAGATGCGCCAGCTCTCTGGCTTGGGAGATCTCCGAGGAAGAGTTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
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| CDS CAA 90 bp | TCAACGGTGCCTTTAAATTTAGTGTCCAGGAGCTGGAGCTGGTGGTaGCTGTCCCTGTGGGACATCTTCAGTTTGGTGCTCTGCTCTGAG | + |
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Preference number: 6 (lower is better) Translates to: STVPLNLVSRSWSWW*LSLWDIFSLVLCSE Trigger: CTCAGAGCAGAGCACCAAACTGAAGATGTCCCACAGGGACAGCAACCACCAGCTCCAGCTCCTGGACACTAAATTTAAAGGCACCGTTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
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| CDS GCA 72 bp | GTCATCTTTGATGCGGAAGGCATGCTCCACCAGTGCTaGTGTGGTTTTCTCATGACAGAGGATCCTGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: VIFDAEGMLHQC*CGFLMTEDPVF Trigger: GAAGACAGGATCCTCTGTCATGAGAAAACCACAGCAGCACTGGTGGAGCATGCCTTCCGCATCAAAGATGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034749.16 ENSMUST00000123206.8 ENSMUST00000141775.2 |
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| CDS GCA 72 bp | TTGCTGTCCCTGTGGGACATCTTCAGTTTGGTGCTCTaGTCTGAGATGGACAAGTCCACTCTGCTCAAAAGC | + |
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Preference number: 6 (lower is better) Translates to: LLSLWDIFSLVL*SEMDKSTLLKS Trigger: GCTTTTGAGCAGAGTGGACTTGTCCATCTCAGAGCAGAGCACCAAACTGAAGATGTCCCACAGGGACAGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
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| CDS CAA 72 bp | TTCTGCATCTTCTGCAAACTGCTGACGATGTCATCTTaGATGCGGAAGGCATGCTCCACCAGTGCTGCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: FCIFCKLLTMSS*MRKACSTSAAV Trigger: CACAGCAGCACTGGTGGAGCATGCCTTCCGCATCAAAGATGACATCGTCAGCAGTTTGCAGAAGATGCAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034749.16 ENSMUST00000123206.8 ENSMUST00000141775.2 |
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| CDS CAA 90 bp | CCCCCTTTATTCTGCATCTTCTGCAAACTGCTGACGATGTCATCTTaGATGCGGAAGGCATGCTCCACCAGTGCTGCTGTGGTTTTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: PPLFCIFCKLLTMSS*MRKACSTSAAVVFS Trigger: TGAGAAAACCACAGCAGCACTGGTGGAGCATGCCTTCCGCATCAAAGATGACATCGTCAGCAGTTTGCAGAAGATGCAGAATAAAGGGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034749.16 ENSMUST00000123206.8 ENSMUST00000141775.2 |
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| CDS TCA 72 bp | CCCGATTCAGTTGCTTCACAATGGCGGTTATGTTTCTaGTATGCTCTTCCAAGAACAGCCTGGCTAAGCGGT | + |
|
Preference number: 6 (lower is better) Translates to: PDSVASQWRLCF*YALPRTAWLSG Trigger: ACCGCTTAGCCAGGCTGTTCTTGGAAGAGCATATCAGAAACATAACCGCCATTGTGAAGCAACTGAATCGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
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| CDS TCA 72 bp | TCTCTTCGATTTTGTCAAGCCTGGCCGACATCTGGCTaGGTTTCTTCTCTACGTCTCTTTCATTGGCTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: SLRFCQAWPTSG*VSSLRLFHWLH Trigger: GTGGAGCCAATGAAAGAGACGTAGAGAAGAAACTCAGCCAGATGTCGGCCAGGCTTGACAAAATCGAAGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
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| CDS GCA 72 bp | GTTTGGTGCTCTGCTCTGAGATGGACAAGTCCACTCTaGTCAAAAGCTGAGAAATCTGTCCTTCTGCGTCTT | + |
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Preference number: 6 (lower is better) Translates to: VWCSALRWTSPL*SKAEKSVLLRL Trigger: AAGACGCAGAAGGACAGATTTCTCAGCTTTTGAGCAGAGTGGACTTGTCCATCTCAGAGCAGAGCACCAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
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| CDS GCA 72 bp | TGCAGAAGTTCTTTCTCTATCCGCTCCTGTTCTTGTTaGAGCCAACTCCGTGCAGACAAAATCTGGTTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: CRSSFSIRSCSC*SQLRADKIWLL Trigger: CAGCAACCAGATTTTGTCTGCACGGAGTTGGCTGCAACAAGAACAGGAGCGGATAGAGAAAGAACTTCTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
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| CDS CAA 90 bp | TCCTTCTGCGTCTTTGATTTTTGTTTCCAGGATAAGCTTGGCTGCTaGCTGTTCCTTGTTCAAGTGCTGGAGTCCCTCGTAGGTCGACTT | + |
|
Preference number: 6 (lower is better) Translates to: SFCVFDFCFQDKLGC*LFLVQVLESLVGRL Trigger: AAGTCGACCTACGAGGGACTCCAGCACTTGAACAAGGAACAGCAAGCAGCCAAGCTTATCCTGGAAACAAAAATCAAAGACGCAGAAGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
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| CDS GCA 72 bp | TTCAGTTGCTTCACAATGGCGGTTATGTTTCTGATATaGTCTTCCAAGAACAGCCTGGCTAAGCGGTCACCT | + |
|
Preference number: 6 (lower is better) Translates to: FSCFTMAVMFLI*SSKNSLAKRSP Trigger: AGGTGACCGCTTAGCCAGGCTGTTCTTGGAAGAGCATATCAGAAACATAACCGCCATTGTGAAGCAACTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
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| CDS GCA 72 bp | TGCGTCTTTGATTTTTGTTTCCAGGATAAGCTTGGCTaGTTGCTGTTCCTTGTTCAAGTGCTGGAGTCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: CVFDFCFQDKLG*LLFLVQVLESL Trigger: GAGGGACTCCAGCACTTGAACAAGGAACAGCAAGCAGCCAAGCTTATCCTGGAAACAAAAATCAAAGACGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
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| CDS CAA 72 bp | GTCTTTGATTTTTGTTTCCAGGATAAGCTTGGCTGCTaGCTGTTCCTTGTTCAAGTGCTGGAGTCCCTCGTA | + |
|
Preference number: 6 (lower is better) Translates to: VFDFCFQDKLGC*LFLVQVLESLV Trigger: TACGAGGGACTCCAGCACTTGAACAAGGAACAGCAAGCAGCCAAGCTTATCCTGGAAACAAAAATCAAAGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
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| CDS GCA 72 bp | TTTTCCTTAACAATCAAGGAGAGATGGTCTATTTTCTaGAGAAGTTCTTTCTCTATCCGCTCCTGTTCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: FSLTIKERWSIF*RSSFSIRSCSC Trigger: ACAAGAACAGGAGCGGATAGAGAAAGAACTTCTGCAGAAAATAGACCATCTCTCCTTGATTGTTAAGGAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034749.16 |
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