Pregenerated sensors for FAM78A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050592Ensembl transcript IDs: ENSMUST00000056406.7, ENSMUST00000139629.2
Found 190 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTGCCTGCTACTGAAGGCTCCAGGCCCAACTCGAGGCTTGTGTGTTaGTCCTCTCTGCACTTCTTGCAGGTCTGTCCAGGGCTTCGGTGG | + |
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Preference number: 1 (lower is better) Translates to: LPATEGSRPNSRLVC*SSLHFLQVCPGLRW Trigger: CCACCGAAGCCCTGGACAGACCTGCAAGAAGTGCAGAGAGGATCAACACACAAGCCTCGAGTTGGGCCTGGAGCCTTCAGTAGCAGGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139629.2 |
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| 3UTR GCA 90 bp | CTGAAGGCTCCAGGCCCAACTCGAGGCTTGTGTGTTGATCCTCTCTaGACTTCTTGCAGGTCTGTCCAGGGCTTCGGTGGCTGGAGAAGC | + |
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Preference number: 1 (lower is better) Translates to: LKAPGPTRGLCVDPL*TSCRSVQGFGGWRS Trigger: GCTTCTCCAGCCACCGAAGCCCTGGACAGACCTGCAAGAAGTGCAGAGAGGATCAACACACAAGCCTCGAGTTGGGCCTGGAGCCTTCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139629.2 |
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| 3UTR TCA 90 bp | ACCCCAAGACTGCCTACCATGTGTCAAGCCAGTTTCACAATGGCCTaGCACCTCCCAGGTGAGTCAGCTGACTGCTTGCTCCCCAGACCT | + |
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Preference number: 1 (lower is better) Translates to: TPRLPTMCQASFTMA*HLPGESADCLLPRP Trigger: AGGTCTGGGGAGCAAGCAGTCAGCTGACTCACCTGGGAGGTGTCAGGCCATTGTGAAACTGGCTTGACACATGGTAGGCAGTCTTGGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
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| 3UTR TCA 90 bp | TGCACTTCTTGCAGGTCTGTCCAGGGCTTCGGTGGCTGGAGAAGCTaGGCTGATGTCAGCATTCCCTCAAGTTCCTGTGAGCTCCTGTGC | + |
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Preference number: 1 (lower is better) Translates to: CTSCRSVQGFGGWRS*ADVSIPSSSCELLC Trigger: GCACAGGAGCTCACAGGAACTTGAGGGAATGCTGACATCAGCTCAGCTTCTCCAGCCACCGAAGCCCTGGACAGACCTGCAAGAAGTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139629.2 |
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| 3UTR CCA 90 bp | GTTCCTGGACACTCAGCCCAGGGTCTTAAAAACTCATTTCTGTGGTaGTGTCTCCAGCTGCCTGCTACTGAAGGCTCCAGGCCCAACTCG | + |
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Preference number: 1 (lower is better) Translates to: VPGHSAQGLKNSFLW*CLQLPATEGSRPNS Trigger: CGAGTTGGGCCTGGAGCCTTCAGTAGCAGGCAGCTGGAGACACCACCACAGAAATGAGTTTTTAAGACCCTGGGCTGAGTGTCCAGGAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139629.2 |
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| 3UTR CCA 90 bp | GGTGTTCCTGGACACTCAGCCCAGGGTCTTAAAAACTCATTTCTGTaGTGGTGTCTCCAGCTGCCTGCTACTGAAGGCTCCAGGCCCAAC | + |
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Preference number: 1 (lower is better) Translates to: GVPGHSAQGLKNSFL*WCLQLPATEGSRPN Trigger: GTTGGGCCTGGAGCCTTCAGTAGCAGGCAGCTGGAGACACCACCACAGAAATGAGTTTTTAAGACCCTGGGCTGAGTGTCCAGGAACACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139629.2 |
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| 3UTR CCA 90 bp | ACGCATGGGTTCGTGTTCACAGTACTGTCCGTGACCAAGGACAGTTaGTGCTTATTGCTAGAAACAGTGAGTGTCCATGCCCGGATGGGC | + |
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Preference number: 1 (lower is better) Translates to: THGFVFTVLSVTKDS*CLLLETVSVHARMG Trigger: GCCCATCCGGGCATGGACACTCACTGTTTCTAGCAATAAGCACCAACTGTCCTTGGTCACGGACAGTACTGTGAACACGAACCCATGCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
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| 3UTR GCA 90 bp | CATGGGTTCGTGTTCACAGTACTGTCCGTGACCAAGGACAGTTGGTaGTTATTGCTAGAAACAGTGAGTGTCCATGCCCGGATGGGCATG | + |
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Preference number: 1 (lower is better) Translates to: HGFVFTVLSVTKDSW*LLLETVSVHARMGM Trigger: CATGCCCATCCGGGCATGGACACTCACTGTTTCTAGCAATAAGCACCAACTGTCCTTGGTCACGGACAGTACTGTGAACACGAACCCATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
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| 3UTR GCA 90 bp | GGTTTCTTTGACATTGTCTTCAAGAGTCTCGCGCCTGCTGGTAAGTaGACGCATGGGTTCGTGTTCACAGTACTGTCCGTGACCAAGGAC | + |
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Preference number: 1 (lower is better) Translates to: GFFDIVFKSLAPAGK*THGFVFTVLSVTKD Trigger: GTCCTTGGTCACGGACAGTACTGTGAACACGAACCCATGCGTGCACTTACCAGCAGGCGCGAGACTCTTGAAGACAATGTCAAAGAAACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
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| 3UTR TCA 90 bp | AGTGCTAAGGACTCAGGTCCCCAGGTGGATCTCACACTATGTTTCTaGTGTCTTCCTTCTCAGAGCCACGGTAAAGGCTTACTCTGGGCT | + |
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Preference number: 1 (lower is better) Translates to: SAKDSGPQVDLTLCF*CLPSQSHGKGLLWA Trigger: AGCCCAGAGTAAGCCTTTACCGTGGCTCTGAGAAGGAAGACATCAGAAACATAGTGTGAGATCCACCTGGGGACCTGAGTCCTTAGCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139629.2 |
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| 3UTR GCA 90 bp | ACACACACGAAAGGGAAACATGATGACTTATCTTCATATCTCATATaGAGGGGGCCCTTGGTAAACCAAGTCATTAAAGCAGATAGGCCA | + |
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Preference number: 1 (lower is better) Translates to: THTKGKHDDLSSYLI*RGPLVNQVIKADRP Trigger: TGGCCTATCTGCTTTAATGACTTGGTTTACCAAGGGCCCCCTGCATATGAGATATGAAGATAAGTCATCATGTTTCCCTTTCGTGTGTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139629.2 |
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| 3UTR-3UTR CCA 90 bp | TTCCCAGCTCTGACTGAAGAGGGCAAGTCCTGTAGGGCAGAGATCCGTGGCCTTTGGGGGTGGGGTGGGTaGGCGCCTGTTGTCCCTGGC | + |
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Preference number: 2 (lower is better) Translates to: FPALTEEGKSCRAEIRGLWGWGG*APVVPG Trigger: GCCAGGGACAACAGGCGCCCACCCACCCCACCCCCA...AAGGCCACGGATCTCTGCCCTACAGGACTTGCCCTCTTCAGTCAGAGCTGGGAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
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| 3UTR-3UTR GCA 90 bp | GTCTCGCGCCTGCTGGTAAGTGCACGCATGGGTTCGTGTTCACAGTACTGTCCGCAGACTCAGTGGCAATaGCCCAACCCCAACCCTGCC | + |
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Preference number: 2 (lower is better) Translates to: VSRLLVSARMGSCSQYCPQTQWQ*PNPNPA Trigger: GGCAGGGTTGGGGTTGGGGCATTGCCACTGAGTCTG...CGGACAGTACTGTGAACACGAACCCATGCGTGCACTTACCAGCAGGCGCGAGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
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| 3UTR-3UTR CCA 90 bp | GGAGCGCAAGATATGTGGGTTTGGGGGTCCCCATGTCCAGAGCAGTTCGGGCCAGCGTATGGGCATCCCTaGGTGCTGGAACCCCAGATT | + |
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Preference number: 2 (lower is better) Translates to: GAQDMWVWGSPCPEQFGPAYGHP*VLEPQI Trigger: AATCTGGGGTTCCAGCACCCAGGGATGCCCATACGC...TGGCCCGAACTGCTCTGGACATGGGGACCCCCAAACCCACATATCTTGCGCTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
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| 3UTR CAA 90 bp | TCTGTTGACTCGGTCCAAGCTTGTCACCACAGCTCCTTCGGGTCCTaGTCCCAGCAGACCTCAGGCTTTGGGACCCCGAGCAGTGGATTC | + |
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Preference number: 2 (lower is better) Translates to: SVDSVQACHHSSFGS*SQQTSGFGTPSSGF Trigger: GAATCCACTGCTCGGGGTCCCAAAGCCTGAGGTCTGCTGGGACAAGGACCCGAAGGAGCTGTGGTGACAAGCTTGGACCGAGTCAACAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139629.2 |
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| 3UTR-3UTR TCA 90 bp | TTGACATTGTCTTCAAGAGTCTCGCGCCTGCTGGTAAGTGCACGCATGGGTTCGGGAGCAGGGTTCAGGTaGGCCTCCCCTCTTCCCAGC | + |
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Preference number: 2 (lower is better) Translates to: LTLSSRVSRLLVSARMGSGAGFR*ASPLPS Trigger: GCTGGGAAGAGGGGAGGCTCACCTGAACCCTGCTCC...CGAACCCATGCGTGCACTTACCAGCAGGCGCGAGACTCTTGAAGACAATGTCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
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| 3UTR-3UTR GCA 90 bp | ATAGAGAAAGAGAAGGCTCCAGGGAGGTCCAGCCCTGACAAGTGGCTCTCCAGCACCAGCCTCCTCCCCTaGCCCTGCATCCACAAAGAG | + |
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Preference number: 2 (lower is better) Translates to: IEKEKAPGRSSPDKWLSSTSLLP*PCIHKE Trigger: CTCTTTGTGGATGCAGGGGCAGGGGAGGAGGCTGGT...GCTGGAGAGCCACTTGTCAGGGCTGGACCTCCCTGGAGCCTTCTCTTTCTCTAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
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| 3UTR CAA 90 bp | AGCAGACCTCAGGCTTTGGGACCCCGAGCAGTGGATTCGCTGGGTTaGGATCGGGCACAGGAGGTAAACAGCTGTGTTCTTTCCTCCCAC | + |
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Preference number: 2 (lower is better) Translates to: SRPQALGPRAVDSLG*DRAQEVNSCVLSSH Trigger: GTGGGAGGAAAGAACACAGCTGTTTACCTCCTGTGCCCGATCCAAACCCAGCGAATCCACTGCTCGGGGTCCCAAAGCCTGAGGTCTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139629.2 |
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| 3UTR-3UTR TCA 90 bp | TTGACATTGTCTTCAAGAGTCTCGCGCCTGCTGGTAAGTGCACGCATGGGTTCGAGGGAGGTCCAGCCCTaGCAAGTGGCTCTCCAGCCA | + |
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Preference number: 2 (lower is better) Translates to: LTLSSRVSRLLVSARMGSREVQP*QVALQP Trigger: TGGCTGGAGAGCCACTTGTCAGGGCTGGACCTCCCT...CGAACCCATGCGTGCACTTACCAGCAGGCGCGAGACTCTTGAAGACAATGTCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
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| 3UTR-3UTR GCA 90 bp | TCCTCTGACCACCATGACACTCTGTCACACGCATGCCAGCATCCGCACACACATTCCTGTGAGCTCCTGTaGGCATCCCTCCACAGCAAC | + |
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Preference number: 2 (lower is better) Translates to: SSDHHDTLSHACQHPHTHSCELL*ASLHSN Trigger: GTTGCTGTGGAGGGATGCGCACAGGAGCTCACAGGA...ATGTGTGTGCGGATGCTGGCATGCGTGTGACAGAGTGTCATGGTGGTCAGAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139629.2 |
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| 3UTR-3UTR CCA 90 bp | GGTCCAAGCTTGTCACCACAGCTCCTTCGGGTCCTTGTCCCAGCAGACCTCAGGAACTCATTTCTGTGGTaGTGTCTCCAGCTGCCTGCT | + |
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Preference number: 2 (lower is better) Translates to: GPSLSPQLLRVLVPADLRNSFLW*CLQLPA Trigger: AGCAGGCAGCTGGAGACACCACCACAGAAATGAGTT...CCTGAGGTCTGCTGGGACAAGGACCCGAAGGAGCTGTGGTGACAAGCTTGGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139629.2 |
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| 3UTR-3UTR CCA 90 bp | GGTCCAAGCTTGTCACCACAGCTCCTTCGGGTCCTTGTCCCAGCAGACCTCAGGAAGAATAGGTGTTCCTaGACACTCAGCCCAGGGTCT | + |
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Preference number: 2 (lower is better) Translates to: GPSLSPQLLRVLVPADLRKNRCS*TLSPGS Trigger: AGACCCTGGGCTGAGTGTCCAGGAACACCTATTCTT...CCTGAGGTCTGCTGGGACAAGGACCCGAAGGAGCTGTGGTGACAAGCTTGGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139629.2 |
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| 3UTR-3UTR TCA 90 bp | ATAGAGAAAGAGAAGGCTCCAGGGAGGTCCAGCCCTGACAAGTGGCTCTCCAGCAGTTTCACAATGGCCTaGCACCTCCCAGGTGAGTCA | + |
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Preference number: 2 (lower is better) Translates to: IEKEKAPGRSSPDKWLSSSFTMA*HLPGES Trigger: TGACTCACCTGGGAGGTGTCAGGCCATTGTGAAACT...GCTGGAGAGCCACTTGTCAGGGCTGGACCTCCCTGGAGCCTTCTCTTTCTCTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
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| 3UTR-3UTR GCA 90 bp | TTGACATTGTCTTCAAGAGTCTCGCGCCTGCTGGTAAGTGCACGCATGGGTTCGGGTGAGTCAGCTGACTaGTTGCTCCCCAGACCTCCA | + |
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Preference number: 2 (lower is better) Translates to: LTLSSRVSRLLVSARMGSGESAD*LLPRPP Trigger: TGGAGGTCTGGGGAGCAAGCAGTCAGCTGACTCACC...CGAACCCATGCGTGCACTTACCAGCAGGCGCGAGACTCTTGAAGACAATGTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
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| 3UTR CAA 90 bp | GGTAAAGGCTTACTCTGGGCTAGAAGCCGGTTTCCTCTGAGTCTGTaGACTCGGTCCAAGCTTGTCACCACAGCTCCTTCGGGTCCTTGT | + |
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Preference number: 2 (lower is better) Translates to: GKGLLWARSRFPLSL*TRSKLVTTAPSGPC Trigger: ACAAGGACCCGAAGGAGCTGTGGTGACAAGCTTGGACCGAGTCAACAGACTCAGAGGAAACCGGCTTCTAGCCCAGAGTAAGCCTTTACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139629.2 |
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| 3UTR-3UTR TCA 90 bp | AGGGTGTCCAGGAGGAGAGCGGGAAGTGTGTTTGCTCTCAGGGACCTGGAGTTATCGAGGCTTGTGTGTTaGTCCTCTCTGCACTTCTTG | + |
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Preference number: 2 (lower is better) Translates to: RVSRRRAGSVFALRDLELSRLVC*SSLHFL Trigger: CAAGAAGTGCAGAGAGGATCAACACACAAGCCTCGA...TAACTCCAGGTCCCTGAGAGCAAACACACTTCCCGCTCTCCTCCTGGACACCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139629.2 |
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| 3UTR-3UTR TCA 90 bp | ACTCTGTCACACGCATGCCAGCATCCGCACACACATCACACACACGTAGTCTTACACAGCACTAGCTTGTaGAACCAGCCCTCAGGAGGC | + |
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Preference number: 2 (lower is better) Translates to: TLSHACQHPHTHHTHVVLHSTSL*NQPSGG Trigger: GCCTCCTGAGGGCTGGTTTCACAAGCTAGTGCTGTG...TAAGACTACGTGTGTGTGATGTGTGTGCGGATGCTGGCATGCGTGTGACAGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139629.2 |
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| 3UTR-3UTR CCA 90 bp | TCTGTGCTTATTACTGGTTCGAATCCAGTGATGCAGCTGTTAGTACGCTTAACGCTGCAGGGAAGCACGTaGAGGAGCCAGGAGGCCGGC | + |
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Preference number: 2 (lower is better) Translates to: SVLITGSNPVMQLLVRLTLQGST*RSQEAG Trigger: GCCGGCCTCCTGGCTCCTCCACGTGCTTCCCTGCAG...CGTTAAGCGTACTAACAGCTGCATCACTGGATTCGAACCAGTAATAAGCACAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
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| 3UTR-3UTR CCA 90 bp | ATAGAGAAAGAGAAGGCTCCAGGGAGGTCCAGCCCTGACAAGTGGCTCTCCAGCGGGGTTCTACTGGGGTaGAATAGAAGCTCTAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: IEKEKAPGRSSPDKWLSSGVLLG*NRSSRK Trigger: CTTCCTAGAGCTTCTATTCCACCCCAGTAGAACCCC...GCTGGAGAGCCACTTGTCAGGGCTGGACCTCCCTGGAGCCTTCTCTTTCTCTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
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| 3UTR-3UTR CCA 90 bp | TTGACATTGTCTTCAAGAGTCTCGCGCCTGCTGGTAAGTGCACGCATGGGTTCGGGCATCCCTGGGTGCTaGAACCCCAGATTCAAGTGT | + |
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Preference number: 2 (lower is better) Translates to: LTLSSRVSRLLVSARMGSGIPGC*NPRFKC Trigger: ACACTTGAATCTGGGGTTCCAGCACCCAGGGATGCC...CGAACCCATGCGTGCACTTACCAGCAGGCGCGAGACTCTTGAAGACAATGTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
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| 3UTR CAA 90 bp | CACGCATGGGTTCGTGTTCACAGTACTGTCCGTGACCAAGGACAGTaGGTGCTTATTGCTAGAAACAGTGAGTGTCCATGCCCGGATGGG | + |
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Preference number: 2 (lower is better) Translates to: HAWVRVHSTVRDQGQ*VLIARNSECPCPDG Trigger: CCCATCCGGGCATGGACACTCACTGTTTCTAGCAATAAGCACCAACTGTCCTTGGTCACGGACAGTACTGTGAACACGAACCCATGCGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
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| 3UTR-3UTR GCA 90 bp | CTCATATGCAGGGGGCCCTTGGTAAACCAAGTCATTAAAGCAGATAGGCCACCGCCTCTCTGCACTTCTTaGAGGTCTGTCCAGGGCTTC | + |
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Preference number: 2 (lower is better) Translates to: LICRGPLVNQVIKADRPPPLCTS*RSVQGF Trigger: GAAGCCCTGGACAGACCTGCAAGAAGTGCAGAGAGG...CGGTGGCCTATCTGCTTTAATGACTTGGTTTACCAAGGGCCCCCTGCATATGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139629.2 |
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| 3UTR CAA 90 bp | TTCGTGTTCACAGTACTGTCCGTGACCAAGGACAGTTGGTGCTTATaGCTAGAAACAGTGAGTGTCCATGCCCGGATGGGCATGGGTGTG | + |
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Preference number: 2 (lower is better) Translates to: FVFTVLSVTKDSWCL*LETVSVHARMGMGV Trigger: CACACCCATGCCCATCCGGGCATGGACACTCACTGTTTCTAGCAATAAGCACCAACTGTCCTTGGTCACGGACAGTACTGTGAACACGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
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| 3UTR-3UTR TCA 90 bp | GTCTCGCGCCTGCTGGTAAGTGCACGCATGGGTTCGTGTTCACAGTACTGTCCGATGAACCAGAAGCTCTaGTATGGCTTCTTTACAGTG | + |
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Preference number: 2 (lower is better) Translates to: VSRLLVSARMGSCSQYCPMNQKL*YGFFTV Trigger: CACTGTAAAGAAGCCATATCAGAGCTTCTGGTTCAT...CGGACAGTACTGTGAACACGAACCCATGCGTGCACTTACCAGCAGGCGCGAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
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| 3UTR-3UTR TCA 90 bp | ACTCTGTCACACGCATGCCAGCATCCGCACACACATCACACACACGTAGTCTTACTGGAGAAGCTGAGCTaGTGTCAGCATTCCCTCAAG | + |
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Preference number: 2 (lower is better) Translates to: TLSHACQHPHTHHTHVVLLEKLS*CQHSLK Trigger: CTTGAGGGAATGCTGACATCAGCTCAGCTTCTCCAG...TAAGACTACGTGTGTGTGATGTGTGTGCGGATGCTGGCATGCGTGTGACAGAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139629.2 |
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| 3UTR-3UTR TCA 90 bp | ACTCTGTCACACGCATGCCAGCATCCGCACACACATCACACACACGTAGTCTTATGTAACCAGGTGTGGTaGCACACATCCCAGCAAAGG | + |
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Preference number: 2 (lower is better) Translates to: TLSHACQHPHTHHTHVVLCNQVW*HTSQQR Trigger: CCTTTGCTGGGATGTGTGTCACCACACCTGGTTACA...TAAGACTACGTGTGTGTGATGTGTGTGCGGATGCTGGCATGCGTGTGACAGAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139629.2 |
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| 3UTR-3UTR GCA 90 bp | AGCAGCTCAAAGCAGACATTTCTAGAAACCATGGCATCACTCAAGGACAAGTTCCTCCTCCCCTGCCCCTaGATCCACAAAGAGGAGGGG | + |
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Preference number: 2 (lower is better) Translates to: SSSKQTFLETMASLKDKFLLPCP*IHKEEG Trigger: CCCCTCCTCTTTGTGGATGCAGGGGCAGGGGAGGAG...GAACTTGTCCTTGAGTGATGCCATGGTTTCTAGAAATGTCTGCTTTGAGCTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
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| 3UTR-3UTR CCA 90 bp | GTCTCGCGCCTGCTGGTAAGTGCACGCATGGGTTCGTGTTCACAGTACTGTCCGCCAGAAGCTCTGATATaGCTTCTTTACAGTGTGCTA | + |
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Preference number: 2 (lower is better) Translates to: VSRLLVSARMGSCSQYCPPEALI*LLYSVL Trigger: TAGCACACTGTAAAGAAGCCATATCAGAGCTTCTGG...CGGACAGTACTGTGAACACGAACCCATGCGTGCACTTACCAGCAGGCGCGAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
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| 3UTR-3UTR CCA 90 bp | TTGACATTGTCTTCAAGAGTCTCGCGCCTGCTGGTAAGTGCACGCATGGGTTCGAGGCTCCCCTACAAATaGCTCAGCAGCAGCAAAAAC | + |
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Preference number: 2 (lower is better) Translates to: LTLSSRVSRLLVSARMGSRLPYK*LSSSKN Trigger: GTTTTTGCTGCTGCTGAGCCATTTGTAGGGGAGCCT...CGAACCCATGCGTGCACTTACCAGCAGGCGCGAGACTCTTGAAGACAATGTCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
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| 3UTR-3UTR CCA 90 bp | GTGACCAAGGACAGTTGGTGCTTATTGCTAGAAACAGTGAGTGTCCATGCCCGGCAAGATATGTGGGTTTaGGGGTCCCCATGTCCAGAG | + |
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Preference number: 2 (lower is better) Translates to: VTKDSWCLLLETVSVHARQDMWV*GSPCPE Trigger: CTCTGGACATGGGGACCCCCAAACCCACATATCTTG...CCGGGCATGGACACTCACTGTTTCTAGCAATAAGCACCAACTGTCCTTGGTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
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| 3UTR-3UTR CCA 90 bp | AGGGTGTCCAGGAGGAGAGCGGGAAGTGTGTTTGCTCTCAGGGACCTGGAGTTAAAAAACTCATTTCTGTaGTGGTGTCTCCAGCTGCCT | + |
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Preference number: 2 (lower is better) Translates to: RVSRRRAGSVFALRDLELKNSFL*WCLQLP Trigger: AGGCAGCTGGAGACACCACCACAGAAATGAGTTTTT...TAACTCCAGGTCCCTGAGAGCAAACACACTTCCCGCTCTCCTCCTGGACACCCT 52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000139629.2 |
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| 3UTR-3UTR TCA 90 bp | GGAGCGCAAGATATGTGGGTTTGGGGGTCCCCATGTCCAGAGCAGTTCGGGCCAATCTGGGTTTCCTTCTaGGCAGTAATATTGTTACTA | + |
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Preference number: 2 (lower is better) Translates to: GAQDMWVWGSPCPEQFGPIWVSF*AVILLL Trigger: TAGTAACAATATTACTGCTCAGAAGGAAACCCAGAT...TGGCCCGAACTGCTCTGGACATGGGGACCCCCAAACCCACATATCTTGCGCTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
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| 3UTR-3UTR TCA 90 bp | AAAGGGAAACATGATGACTTATCTTCATATCTCATATGCAGGGGGCCCTTGGTACCAGCTGCCTGCTACTaGAGGCTCCAGGCCCAACTC | + |
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Preference number: 2 (lower is better) Translates to: KGKHDDLSSYLICRGPLVPAACY*RLQAQL Trigger: GAGTTGGGCCTGGAGCCTTCAGTAGCAGGCAGCTGG...TACCAAGGGCCCCCTGCATATGAGATATGAAGATAAGTCATCATGTTTCCCTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139629.2 |
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| 3UTR-3UTR CCA 90 bp | TGCCTACCATGTGTCAAGCCAGTTTCACAATGGCCTGACACCTCCCAGGTGAGTACCCTGCCAGGCATTTaGGACCAAGATAATGGAAGA | + |
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Preference number: 2 (lower is better) Translates to: CLPCVKPVSQWPDTSQVSTLPGI*DQDNGR Trigger: TCTTCCATTATCTTGGTCCCAAATGCCTGGCAGGGT...ACTCACCTGGGAGGTGTCAGGCCATTGTGAAACTGGCTTGACACATGGTAGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
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| 3UTR-3UTR TCA 90 bp | CTCATATGCAGGGGGCCCTTGGTAAACCAAGTCATTAAAGCAGATAGGCCACCGAGTCTTACTAAAAAGTaGGTGGAGAGCTGGGCATGC | + |
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Preference number: 2 (lower is better) Translates to: LICRGPLVNQVIKADRPPSLTKK*VESWAC Trigger: GCATGCCCAGCTCTCCACTCACTTTTTAGTAAGACT...CGGTGGCCTATCTGCTTTAATGACTTGGTTTACCAAGGGCCCCCTGCATATGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000139629.2 |
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| 3UTR-3UTR CCA 90 bp | GTTTTCTGTGCTTATTACTGGTTCGAATCCAGTGATGCAGCTGTTAGTACGCTTCTACATAAGGCCGCATaGCAGAGGGGAGGCAGAGGG | + |
|
Preference number: 2 (lower is better) Translates to: VFCAYYWFESSDAAVSTLLHKAA*QRGGRG Trigger: CCCTCTGCCTCCCCTCTGCCATGCGGCCTTATGTAG...AAGCGTACTAACAGCTGCATCACTGGATTCGAACCAGTAATAAGCACAGAAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
||
| 3UTR-3UTR GCA 90 bp | GTGACCAAGGACAGTTGGTGCTTATTGCTAGAAACAGTGAGTGTCCATGCCCGGCAGGAGGAAAGGGCATaGCATCTTTACCTTAAGACA | + |
|
Preference number: 2 (lower is better) Translates to: VTKDSWCLLLETVSVHARQEERA*HLYLKT Trigger: TGTCTTAAGGTAAAGATGGCATGCCCTTTCCTCCTG...CCGGGCATGGACACTCACTGTTTCTAGCAATAAGCACCAACTGTCCTTGGTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
||
| 3UTR-3UTR TCA 90 bp | GTGACCAAGGACAGTTGGTGCTTATTGCTAGAAACAGTGAGTGTCCATGCCCGGAAGAGTCTGTGGTTTTaGTTCTGCACAAACAACAGG | + |
|
Preference number: 2 (lower is better) Translates to: VTKDSWCLLLETVSVHARKSLWF*FCTNNR Trigger: CCTGTTGTTTGTGCAGAATCAAAACCACAGACTCTT...CCGGGCATGGACACTCACTGTTTCTAGCAATAAGCACCAACTGTCCTTGGTCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
||
| 3UTR-3UTR GCA 90 bp | GTTTTCTGTGCTTATTACTGGTTCGAATCCAGTGATGCAGCTGTTAGTACGCTTGCACCCTCCAGCTGGTaGTTAGCTCCTATATGCAGC | + |
|
Preference number: 2 (lower is better) Translates to: VFCAYYWFESSDAAVSTLAPSSW*LAPICS Trigger: GCTGCATATAGGAGCTAAGCACCAGCTGGAGGGTGC...AAGCGTACTAACAGCTGCATCACTGGATTCGAACCAGTAATAAGCACAGAAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
||
| 3UTR CAA 90 bp | GGGAAACATGATGACTTATCTTCATATCTCATATGCAGGGGGCCCTaGGTAAACCAAGTCATTAAAGCAGATAGGCCACCGATAGGCTTA | + |
|
Preference number: 2 (lower is better) Translates to: GKHDDLSSYLICRGP*VNQVIKADRPPIGL Trigger: TAAGCCTATCGGTGGCCTATCTGCTTTAATGACTTGGTTTACCAAGGGCCCCCTGCATATGAGATATGAAGATAAGTCATCATGTTTCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139629.2 |
||
| 3UTR-3UTR GCA 90 bp | GTGACCAAGGACAGTTGGTGCTTATTGCTAGAAACAGTGAGTGTCCATGCCCGGGATAACAGTTTTCTGTaGTTATTACTGGTTCGAATC | + |
|
Preference number: 2 (lower is better) Translates to: VTKDSWCLLLETVSVHARDNSFL*LLLVRI Trigger: GATTCGAACCAGTAATAAGCACAGAAAACTGTTATC...CCGGGCATGGACACTCACTGTTTCTAGCAATAAGCACCAACTGTCCTTGGTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
||
| 3UTR-3UTR CAA 90 bp | GGAGCGCAAGATATGTGGGTTTGGGGGTCCCCATGTCCAGAGCAGTTCGGGCCACCTGAGATCGCTCTCTaGCCCCCTCACGCAGACGCC | + |
|
Preference number: 3 (lower is better) Translates to: GAQDMWVWGSPCPEQFGPPEIAL*PPHADA Trigger: GGCGTCTGCGTGAGGGGGCAAGAGAGCGATCTCAGG...TGGCCCGAACTGCTCTGGACATGGGGACCCCCAAACCCACATATCTTGCGCTCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
||
| 3UTR GCA 72 bp | GGGGAGCCAAGGAAGCCAGGTGGGCAAAGCCAGGCATaGAGTGGGGAAGGAGCGCAAGATATGTGGGTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: GEPRKPGGQSQA*SGEGAQDMWVW Trigger: CCAAACCCACATATCTTGCGCTCCTTCCCCACTGCATGCCTGGCTTTGCCCACCTGGCTTCCTTGGCTCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
||
| 3UTR CCA 72 bp | GCCAAGGAAGCCAGGTGGGCAAAGCCAGGCATGCAGTaGGGAAGGAGCGCAAGATATGTGGGTTTGGGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: AKEARWAKPGMQ*GRSARYVGLGV Trigger: GACCCCCAAACCCACATATCTTGCGCTCCTTCCCCACTGCATGCCTGGCTTTGCCCACCTGGCTTCCTTGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
||
| 3UTR TCA 72 bp | GTGGAGGAGCCAGGAGGCCGGCCGGTTTTAGCACAGTaGGATCCGCCCCGGGAGAAGGTAGAATGGTTGTAT | + |
|
Preference number: 3 (lower is better) Translates to: VEEPGGRPVLAQ*DPPREKVEWLY Trigger: ATACAACCATTCTACCTTCTCCCGGGGCGGATCTCACTGTGCTAAAACCGGCCGGCCTCCTGGCTCCTCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
||
| 3UTR TCA 72 bp | AGCAGGGTTCAGGTGAGCCTCCCCTCTTCCCAGCTCTaGCTGAAGAGGGCAAGTCCTGTAGGGCAGAGATCC | + |
|
Preference number: 3 (lower is better) Translates to: SRVQVSLPSSQL*LKRASPVGQRS Trigger: GGATCTCTGCCCTACAGGACTTGCCCTCTTCAGTCAGAGCTGGGAAGAGGGGAGGCTCACCTGAACCCTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
||
| 3UTR TCA 72 bp | TGTGCCATGGGCATGATCTGTTCGGTGTGCTCCAGGTaGCTGCAGCCCCCAGCCCTAGTGGCTGAGAATGAC | + |
|
Preference number: 3 (lower is better) Translates to: CAMGMICSVCSR*LQPPALVAEND Trigger: GTCATTCTCAGCCACTAGGGCTGGGGGCTGCAGTCACCTGGAGCACACCGAACAGATCATGCCCATGGCACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
||
| 3UTR TCA 72 bp | CATAGAGTCGCCAAGGCAGAGGGGGACTGGCAGGGATaGGGCCACGCAGGTGGTGAAGAGATGAGAATGTCG | + |
|
Preference number: 3 (lower is better) Translates to: HRVAKAEGDWQG*GHAGGEEMRMS Trigger: CGACATTCTCATCTCTTCACCACCTGCGTGGCCTCATCCCTGCCAGTCCCCCTCTGCCTTGGCGACTCTATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139629.2 |
||
| 3UTR GCA 72 bp | CCAGGCCCAACTCGAGGCTTGTGTGTTGATCCTCTCTaGACTTCTTGCAGGTCTGTCCAGGGCTTCGGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: PGPTRGLCVDPL*TSCRSVQGFGG Trigger: GCCACCGAAGCCCTGGACAGACCTGCAAGAAGTGCAGAGAGGATCAACACACAAGCCTCGAGTTGGGCCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139629.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTCTGTTGACTCGGTCCAAGCTTGTCACCACAGCTCCTTCGGGTCCTTGTCCCAGCAGACCTCAGGCTTaGGGACCCCGAGCAGTGGAT | + |
|
Preference number: 3 (lower is better) Translates to: SLLTRSKLVTTAPSGPCPSRPQA*GPRAVD Trigger: ATCCACTGCTCGGGGTCCCAAAGCCTGAGGTCTGCT...GGGACAAGGACCCGAAGGAGCTGTGGTGACAAGCTTGGACCGAGTCAACAGACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139629.2 |
||
| 3UTR GCA 72 bp | CTTAAGACAGCTGGGACTGTCCAGACTCAGTGGCAATaGCCCAACCCCAACCCTGCCAGGCATTTGGGACCA | + |
|
Preference number: 3 (lower is better) Translates to: LKTAGTVQTQWQ*PNPNPARHLGP Trigger: TGGTCCCAAATGCCTGGCAGGGTTGGGGTTGGGGCATTGCCACTGAGTCTGGACAGTCCCAGCTGTCTTAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
||
| 3UTR GCA 72 bp | GATGTCAGCATTCCCTCAAGTTCCTGTGAGCTCCTGTaGGCATCCCTCCACAGCAACAGACTCGCAGCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: DVSIPSSSCELL*ASLHSNRLAAA Trigger: GGCTGCTGCGAGTCTGTTGCTGTGGAGGGATGCGCACAGGAGCTCACAGGAACTTGAGGGAATGCTGACATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139629.2 |
||
| 3UTR-3UTR CAA 90 bp | ACTCTGTCACACGCATGCCAGCATCCGCACACACATCACACACACGTAGTCTTAAGCTCCTTCGGGTCCTaGTCCCAGCAGACCTCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: TLSHACQHPHTHHTHVVLSSFGS*SQQTSG Trigger: GCCTGAGGTCTGCTGGGACAAGGACCCGAAGGAGCT...TAAGACTACGTGTGTGTGATGTGTGTGCGGATGCTGGCATGCGTGTGACAGAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139629.2 |
||
| 3UTR TCA 72 bp | AACACAGAGAAGGCCTTTCCAGTCACCAGCCAACCCTaGTCTAGTGTGGGGCTGAGACCTCATGGCTCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: NTEKAFPVTSQP*SSVGLRPHGSP Trigger: GGGAGAGCCATGAGGTCTCAGCCCCACACTAGATCAGGGTTGGCTGGTGACTGGAAAGGCCTTCTCTGTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
||
| 3UTR TCA 72 bp | ACTGAAGGCTCCAGGCCCAACTCGAGGCTTGTGTGTTaGTCCTCTCTGCACTTCTTGCAGGTCTGTCCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: TEGSRPNSRLVC*SSLHFLQVCPG Trigger: CCCTGGACAGACCTGCAAGAAGTGCAGAGAGGATCAACACACAAGCCTCGAGTTGGGCCTGGAGCCTTCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139629.2 |
||
| 3UTR TCA 72 bp | CTCATTTCTGTGGTGGTGTCTCCAGCTGCCTGCTACTaGAGGCTCCAGGCCCAACTCGAGGCTTGTGTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: LISVVVSPAACY*RLQAQLEACVL Trigger: CAACACACAAGCCTCGAGTTGGGCCTGGAGCCTTCAGTAGCAGGCAGCTGGAGACACCACCACAGAAATGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139629.2 |
||
| 3UTR CCA 72 bp | GAGGGAAGCCTGGGGTCTGTCAACAACATGAGGCAATaGACCGAGGGGACCAACCCAAGAGAAGCTGAGTGT | + |
|
Preference number: 3 (lower is better) Translates to: EGSLGSVNNMRQ*TEGTNPREAEC Trigger: ACACTCAGCTTCTCTTGGGTTGGTCCCCTCGGTCCATTGCCTCATGTTGTTGACAGACCCCAGGCTTCCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
||
| 3UTR-3UTR CAA 90 bp | GTAGTCTTACTAAAAAGTGAGTGGAGAGCTGGGCATGCAGCTCAGTGGGAGGCGGTGGATTCGCTGGGTTaGGATCGGGCACAGGAGGTA | + |
|
Preference number: 3 (lower is better) Translates to: VVLLKSEWRAGHAAQWEAVDSLG*DRAQEV Trigger: TACCTCCTGTGCCCGATCCAAACCCAGCGAATCCAC...CGCCTCCCACTGAGCTGCATGCCCAGCTCTCCACTCACTTTTTAGTAAGACTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139629.2 |
||
| 3UTR TCA 72 bp | TGTGGGGCTGAGACCTCATGGCTCTCCCAGCTAAGATaGCATAGAGAAAGAGAAGGCTCCAGGGAGGTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: CGAETSWLSQLR*HREREGSREVQ Trigger: CTGGACCTCCCTGGAGCCTTCTCTTTCTCTATGTCATCTTAGCTGGGAGAGCCATGAGGTCTCAGCCCCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
||
| 3UTR CCA 72 bp | CTTTACCTTAAGACAGCTGGGACTGTCCAGACTCAGTaGCAATGCCCCAACCCCAACCCTGCCAGGCATTTG | + |
|
Preference number: 3 (lower is better) Translates to: LYLKTAGTVQTQ*QCPNPNPARHL Trigger: CAAATGCCTGGCAGGGTTGGGGTTGGGGCATTGCCACTGAGTCTGGACAGTCCCAGCTGTCTTAAGGTAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
||
| 3UTR GCA 72 bp | GACATTGTCTTCAAGAGTCTCGCGCCTGCTGGTAAGTaGACGCATGGGTTCGTGTTCACAGTACTGTCCGTG | + |
|
Preference number: 3 (lower is better) Translates to: DIVFKSLAPAGK*THGFVFTVLSV Trigger: CACGGACAGTACTGTGAACACGAACCCATGCGTGCACTTACCAGCAGGCGCGAGACTCTTGAAGACAATGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
||
| 3UTR GCA 72 bp | GTCTTAAAAACTCATTTCTGTGGTGGTGTCTCCAGCTaGCTGCTACTGAAGGCTCCAGGCCCAACTCGAGGC | + |
|
Preference number: 3 (lower is better) Translates to: VLKTHFCGGVSS*LLLKAPGPTRG Trigger: GCCTCGAGTTGGGCCTGGAGCCTTCAGTAGCAGGCAGCTGGAGACACCACCACAGAAATGAGTTTTTAAGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139629.2 |
||
| 3UTR GCA 72 bp | TTGTCCTCTGACCACCATGACACTCTGTCACACGCATaGCAGCATCCGCACACACATCACACACACGTAGTC | + |
|
Preference number: 3 (lower is better) Translates to: LSSDHHDTLSHA*QHPHTHHTHVV Trigger: GACTACGTGTGTGTGATGTGTGTGCGGATGCTGGCATGCGTGTGACAGAGTGTCATGGTGGTCAGAGGACAA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139629.2 |
||
| 3UTR CCA 72 bp | CACTCAGCCCAGGGTCTTAAAAACTCATTTCTGTGGTaGTGTCTCCAGCTGCCTGCTACTGAAGGCTCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: HSAQGLKNSFLW*CLQLPATEGSR Trigger: CCTGGAGCCTTCAGTAGCAGGCAGCTGGAGACACCACCACAGAAATGAGTTTTTAAGACCCTGGGCTGAGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139629.2 |
||
| 3UTR CCA 72 bp | GGACACTCAGCCCAGGGTCTTAAAAACTCATTTCTGTaGTGGTGTCTCCAGCTGCCTGCTACTGAAGGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: GHSAQGLKNSFL*WCLQLPATEGS Trigger: GGAGCCTTCAGTAGCAGGCAGCTGGAGACACCACCACAGAAATGAGTTTTTAAGACCCTGGGCTGAGTGTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139629.2 |
||
| 3UTR GCA 72 bp | ACAAGTTCTAGGGCTCCAGAAGGGAGACCCCAAGACTaGCTACCATGTGTCAAGCCAGTTTCACAATGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: TSSRAPEGRPQD*LPCVKPVSQWP Trigger: AGGCCATTGTGAAACTGGCTTGACACATGGTAGGCAGTCTTGGGGTCTCCCTTCTGGAGCCCTAGAACTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
||
| 3UTR CCA 72 bp | GCCGCTTCCCCTGAGAATGAACCAGAAGCTCTGATATaGCTTCTTTACAGTGTGCTAGCGTATGGGCATCCC | + |
|
Preference number: 3 (lower is better) Translates to: AASPENEPEALI*LLYSVLAYGHP Trigger: GGGATGCCCATACGCTAGCACACTGTAAAGAAGCCATATCAGAGCTTCTGGTTCATTCTCAGGGGAAGCGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
||
| 3UTR GCA 72 bp | GTGTTCACAGTACTGTCCGTGACCAAGGACAGTTGGTaGTTATTGCTAGAAACAGTGAGTGTCCATGCCCGG | + |
|
Preference number: 3 (lower is better) Translates to: VFTVLSVTKDSW*LLLETVSVHAR Trigger: CCGGGCATGGACACTCACTGTTTCTAGCAATAAGCACCAACTGTCCTTGGTCACGGACAGTACTGTGAACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
||
| 3UTR CCA 72 bp | AGCTCTGATATGGCTTCTTTACAGTGTGCTAGCGTATaGGCATCCCTGGGTGCTGGAACCCCAGATTCAAGT | + |
|
Preference number: 3 (lower is better) Translates to: SSDMASLQCASV*ASLGAGTPDSS Trigger: ACTTGAATCTGGGGTTCCAGCACCCAGGGATGCCCATACGCTAGCACACTGTAAAGAAGCCATATCAGAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
||
| 3UTR TCA 72 bp | GACTCAGGTCCCCAGGTGGATCTCACACTATGTTTCTaGTGTCTTCCTTCTCAGAGCCACGGTAAAGGCTTA | + |
|
Preference number: 3 (lower is better) Translates to: DSGPQVDLTLCF*CLPSQSHGKGL Trigger: TAAGCCTTTACCGTGGCTCTGAGAAGGAAGACATCAGAAACATAGTGTGAGATCCACCTGGGGACCTGAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139629.2 |
||
| 3UTR CCA 72 bp | AAGGTGAAAACGTTACCTAGCTCCAACCCAACACTTTaGGGACTCTTCTCCCAGAATACCTCCATCAGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: KVKTLPSSNPTL*GLFSQNTSIRQ Trigger: TTGCCTGATGGAGGTATTCTGGGAGAAGAGTCCCCAAAGTGTTGGGTTGGAGCTAGGTAACGTTTTCACCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
||
| 3UTR CCA 72 bp | TTCGTGTTCACAGTACTGTCCGTGACCAAGGACAGTTaGTGCTTATTGCTAGAAACAGTGAGTGTCCATGCC | + |
|
Preference number: 3 (lower is better) Translates to: FVFTVLSVTKDS*CLLLETVSVHA Trigger: GGCATGGACACTCACTGTTTCTAGCAATAAGCACCAACTGTCCTTGGTCACGGACAGTACTGTGAACACGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
||
| 3UTR TCA 72 bp | CACTCACCTCACCGTGAAAGCTGCTGCCTCAAACCATaGTGGAAGGAAAGAATGTATTCTCTACAGTTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: HSPHRESCCLKP*WKERMYSLQLS Trigger: GGACAACTGTAGAGAATACATTCTTTCCTTCCATCATGGTTTGAGGCAGCAGCTTTCACGGTGAGGTGAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139629.2 |
||
| 3UTR-3UTR CAA 90 bp | GTTTTCTGTGCTTATTACTGGTTCGAATCCAGTGATGCAGCTGTTAGTACGCTTGAAGAGTCTGTGGTTTaGATTCTGCACAAACAACAG | + |
|
Preference number: 3 (lower is better) Translates to: VFCAYYWFESSDAAVSTLEESVV*ILHKQQ Trigger: CTGTTGTTTGTGCAGAATCAAAACCACAGACTCTTC...AAGCGTACTAACAGCTGCATCACTGGATTCGAACCAGTAATAAGCACAGAAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
||
| 3UTR GCA 72 bp | AAAGGGAAACATGATGACTTATCTTCATATCTCATATaGAGGGGGCCCTTGGTAAACCAAGTCATTAAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: KGKHDDLSSYLI*RGPLVNQVIKA Trigger: TGCTTTAATGACTTGGTTTACCAAGGGCCCCCTGCATATGAGATATGAAGATAAGTCATCATGTTTCCCTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139629.2 |
||
| CDS-3UTR CCA 90 bp | CTCAGTGGGAGGCGTGCTGAGCCCTCAGGAAGCCTTAGCTTGCACTTCGCACTGGCTGGTCCTGGGCAATaGGCTCCCGCAGCCTGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: LSGRRAEPSGSLSLHFALAGPGQ*APAAWR Trigger: GCGCCAGGCTGCGGGAGCCCATTGCCCAGGACCAGC...CAGTGCGAAGTGCAAGCTAAGGCTTCCTGAGGGCTCAGCACGCCTCCCACTGAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139629.2 |
||
| CDS-3UTR CCA 90 bp | ATAGAGAAAGAGAAGGCTCCAGGGAGGTCCAGCCCTGACAAGTGGCTCTCCAGCGCTGGTCCTGGGCAATaGGCTCCCGCAGCCTGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: IEKEKAPGRSSPDKWLSSAGPGQ*APAAWR Trigger: GCGCCAGGCTGCGGGAGCCCATTGCCCAGGACCAGC...GCTGGAGAGCCACTTGTCAGGGCTGGACCTCCCTGGAGCCTTCTCTTTCTCTAT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
||
| 3UTR CAA 72 bp | TCGGTCCAAGCTTGTCACCACAGCTCCTTCGGGTCCTaGTCCCAGCAGACCTCAGGCTTTGGGACCCCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SVQACHHSSFGS*SQQTSGFGTPS Trigger: GCTCGGGGTCCCAAAGCCTGAGGTCTGCTGGGACAAGGACCCGAAGGAGCTGTGGTGACAAGCTTGGACCGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139629.2 |
||
| CDS-3UTR TCA 90 bp | ACGCAGACGCCCAGGAGGAGGAGCAGGGTTCAGGTGAGCCTCCCCTCTTCCCAGATATGGCTGCACGCCTaGATCCAACCAACGATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TQTPRRRSRVQVSLPSSQIWLHA*IQPTIQ Trigger: CTGGATCGTTGGTTGGATTCAGGCGTGCAGCCATAT...CTGGGAAGAGGGGAGGCTCACCTGAACCCTGCTCCTCCTCCTGGGCGTCTGCGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
||
| CDS-3UTR CCA 90 bp | GGAGCGCAAGATATGTGGGTTTGGGGGTCCCCATGTCCAGAGCAGTTCGGGCCAACTCGTCGATGCTGGTaGGGATGGGGTCGATGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GAQDMWVWGSPCPEQFGPTRRCW*GWGRWR Trigger: CCTCCATCGACCCCATCCCCACCAGCATCGACGAGT...TGGCCCGAACTGCTCTGGACATGGGGACCCCCAAACCCACATATCTTGCGCTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
||
| CDS-3UTR TCA 90 bp | AGTCTGTTGACTCGGTCCAAGCTTGTCACCACAGCTCCTTCGGGTCCTTGTCCCCATGACCACTTGGGCTaGGGCCCGGAAGTGGGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SLLTRSKLVTTAPSGPCPHDHLG*GPEVGC Trigger: ACACCCCACTTCCGGGCCTCAGCCCAAGTGGTCATG...GGGACAAGGACCCGAAGGAGCTGTGGTGACAAGCTTGGACCGAGTCAACAGACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139629.2 |
||
| CDS-3UTR TCA 90 bp | TTGACATTGTCTTCAAGAGTCTCGCGCCTGCTGGTAAGTGCACGCATGGGTTCGCGTTGGCGTTGGGCTTaGCCAGGGCACTGGGCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LTLSSRVSRLLVSARMGSRWRWA*PGHWAG Trigger: TCCCGCCCAGTGCCCTGGTCAAGCCCAACGCCAACG...CGAACCCATGCGTGCACTTACCAGCAGGCGCGAGACTCTTGAAGACAATGTCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
||
| CDS-3UTR GCA 90 bp | ACGCAGACGCCCAGGAGGAGGAGCAGGGTTCAGGTGAGCCTCCCCTCTTCCCAGGGAAGACTCTGGCTTTaGCTCCGATGCTCTGAATAC | + |
|
Preference number: 4 (lower is better) Translates to: TQTPRRRSRVQVSLPSSQGRLWL*LRCSEY Trigger: GTATTCAGAGCATCGGAGGCAAAGCCAGAGTCTTCC...CTGGGAAGAGGGGAGGCTCACCTGAACCCTGCTCCTCCTCCTGGGCGTCTGCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
||
| CDS-3UTR CCA 90 bp | GTCTCGCGCCTGCTGGTAAGTGCACGCATGGGTTCGTGTTCACAGTACTGTCCGTGGAGTCCCTCTTGGTaGGCCCCACAATCGTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VSRLLVSARMGSCSQYCPWSPSW*APQSCR Trigger: CCTGCACGATTGTGGGGCCCACCAAGAGGGACTCCA...CGGACAGTACTGTGAACACGAACCCATGCGTGCACTTACCAGCAGGCGCGAGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
||
| CDS-3UTR CCA 90 bp | TTCCCAGCTCTGACTGAAGAGGGCAAGTCCTGTAGGGCAGAGATCCGTGGCCTTGGCCCAGGGGCCGGTTaGGATTCACCTCGATGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: FPALTEEGKSCRAEIRGLGPGAG*DSPRCS Trigger: TGAGCATCGAGGTGAATCCCAACCGGCCCCTGGGCC...AAGGCCACGGATCTCTGCCCTACAGGACTTGCCCTCTTCAGTCAGAGCTGGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
||
| CDS-3UTR CCA 90 bp | AGGGTGTCCAGGAGGAGAGCGGGAAGTGTGTTTGCTCTCAGGGACCTGGAGTTAGGCCCAGGGGCCGGTTaGGATTCACCTCGATGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RVSRRRAGSVFALRDLELGPGAG*DSPRCS Trigger: TGAGCATCGAGGTGAATCCCAACCGGCCCCTGGGCC...TAACTCCAGGTCCCTGAGAGCAAACACACTTCCCGCTCTCCTCCTGGACACCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139629.2 |
||
| CDS-3UTR GCA 90 bp | GTCTCGCGCCTGCTGGTAAGTGCACGCATGGGTTCGTGTTCACAGTACTGTCCGAGCTGCATGCGCCAGTaGAGGGTCTGCAGGATGATC | + |
|
Preference number: 4 (lower is better) Translates to: VSRLLVSARMGSCSQYCPSCMRQ*RVCRMI Trigger: GATCATCCTGCAGACCCTGCACTGGCGCATGCAGCT...CGGACAGTACTGTGAACACGAACCCATGCGTGCACTTACCAGCAGGCGCGAGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
||
| CDS-3UTR GCA 90 bp | ATAGAGAAAGAGAAGGCTCCAGGGAGGTCCAGCCCTGACAAGTGGCTCTCCAGCACCTCGATGCTCAGCTaGATGCGCCAGTGCAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: IEKEKAPGRSSPDKWLSSTSMLS*MRQCRV Trigger: GACCCTGCACTGGCGCATGCAGCTGAGCATCGAGGT...GCTGGAGAGCCACTTGTCAGGGCTGGACCTCCCTGGAGCCTTCTCTTTCTCTAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
||
| CDS-3UTR GCA 90 bp | GGTCCAAGCTTGTCACCACAGCTCCTTCGGGTCCTTGTCCCAGCAGACCTCAGGTGGGATTCACCTCGATaGTCAGCTGCATGCGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: GPSLSPQLLRVLVPADLRWDSPR*SAACAS Trigger: ACTGGCGCATGCAGCTGAGCATCGAGGTGAATCCCA...CCTGAGGTCTGCTGGGACAAGGACCCGAAGGAGCTGTGGTGACAAGCTTGGACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139629.2 |
||
| CDS-3UTR CCA 90 bp | GGAGCGCAAGATATGTGGGTTTGGGGGTCCCCATGTCCAGAGCAGTTCGGGCCACTTCCCGGAAGACTCTaGCTTTGCCTCCGATGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GAQDMWVWGSPCPEQFGPLPGRL*LCLRCS Trigger: AGAGCATCGGAGGCAAAGCCAGAGTCTTCCGGGAAG...TGGCCCGAACTGCTCTGGACATGGGGACCCCCAAACCCACATATCTTGCGCTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
||
| CDS-3UTR CCA 90 bp | AGGGTGTCCAGGAGGAGAGCGGGAAGTGTGTTTGCTCTCAGGGACCTGGAGTTAACTCGTCGATGCTGGTaGGGATGGGGTCGATGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RVSRRRAGSVFALRDLELTRRCW*GWGRWR Trigger: CCTCCATCGACCCCATCCCCACCAGCATCGACGAGT...TAACTCCAGGTCCCTGAGAGCAAACACACTTCCCGCTCTCCTCCTGGACACCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139629.2 |
||
| CDS-3UTR CCA 90 bp | TTGACTCGGTCCAAGCTTGTCACCACAGCTCCTTCGGGTCCTTGTCCCAGCAGAAGGACTCGTCGATGCTaGTGGGGATGGGGTCGATGG | + |
|
Preference number: 4 (lower is better) Translates to: LTRSKLVTTAPSGPCPSRRTRRC*WGWGRW Trigger: CCATCGACCCCATCCCCACCAGCATCGACGAGTCCT...TCTGCTGGGACAAGGACCCGAAGGAGCTGTGGTGACAAGCTTGGACCGAGTCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139629.2 |
||
| CDS-3UTR CCA 90 bp | CTCAGTGGGAGGCGTGCTGAGCCCTCAGGAAGCCTTAGCTTGCACTTCGCACTGTCGTGCAGGTCTCCGTaGTATTGCCGTACCAGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LSGRRAEPSGSLSLHFALSCRSP*YCRTRD Trigger: ATCCCTGGTACGGCAATACCACGGAGACCTGCACGA...CAGTGCGAAGTGCAAGCTAAGGCTTCCTGAGGGCTCAGCACGCCTCCCACTGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139629.2 |
||
| CDS-3UTR CCA 90 bp | AGCATAGGCAACATAGAGTCGCCAAGGCAGAGGGGGACTGGCAGGGATGAGGCCGGTCCCGGTAGATGTTaGTCAGTTTGGCCACGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SIGNIESPRQRGTGRDEAGPGRC*SVWPRC Trigger: GCAACGTGGCCAAACTGACCAACATCTACCGGGACC...GGCCTCATCCCTGCCAGTCCCCCTCTGCCTTGGCGACTCTATGTTGCCTATGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139629.2 |
||
| CDS-3UTR TCA 90 bp | GATCGGGCACAGGAGGTAAACAGCTGTGTTCTTTCCTCCCACAGAAGAATAGGTCGTTGGCGTTGGGCTTaGCCAGGGCACTGGGCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: DRAQEVNSCVLSSHRRIGRWRWA*PGHWAG Trigger: TCCCGCCCAGTGCCCTGGTCAAGCCCAACGCCAACG...ACCTATTCTTCTGTGGGAGGAAAGAACACAGCTGTTTACCTCCTGTGCCCGATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139629.2 |
||
| CDS-3UTR GCA 90 bp | TCCTCTGACCACCATGACACTCTGTCACACGCATGCCAGCATCCGCACACACATACCTCGATGCTCAGCTaGATGCGCCAGTGCAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SSDHHDTLSHACQHPHTHTSMLS*MRQCRV Trigger: GACCCTGCACTGGCGCATGCAGCTGAGCATCGAGGT...ATGTGTGTGCGGATGCTGGCATGCGTGTGACAGAGTGTCATGGTGGTCAGAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139629.2 |
||
| CDS-3UTR CCA 90 bp | TTCCCAGCTCTGACTGAAGAGGGCAAGTCCTGTAGGGCAGAGATCCGTGGCCTTCGATGCTGGTGGGGATaGGGTCGATGGAGGCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: FPALTEEGKSCRAEIRGLRCWWG*GRWRLS Trigger: TGAAAGCCTCCATCGACCCCATCCCCACCAGCATCG...AAGGCCACGGATCTCTGCCCTACAGGACTTGCCCTCTTCAGTCAGAGCTGGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
||
| CDS-3UTR CCA 90 bp | ATAGAGAAAGAGAAGGCTCCAGGGAGGTCCAGCCCTGACAAGTGGCTCTCCAGCATTTTAGGCTGGTCCTaGGCAATGGGCTCCCGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: IEKEKAPGRSSPDKWLSSILGWS*AMGSRS Trigger: GCTGCGGGAGCCCATTGCCCAGGACCAGCCTAAAAT...GCTGGAGAGCCACTTGTCAGGGCTGGACCTCCCTGGAGCCTTCTCTTTCTCTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
||
| CDS-3UTR CCA 90 bp | TTGACTCGGTCCAAGCTTGTCACCACAGCTCCTTCGGGTCCTTGTCCCAGCAGAATTTTAGGCTGGTCCTaGGCAATGGGCTCCCGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LTRSKLVTTAPSGPCPSRILGWS*AMGSRS Trigger: GCTGCGGGAGCCCATTGCCCAGGACCAGCCTAAAAT...TCTGCTGGGACAAGGACCCGAAGGAGCTGTGGTGACAAGCTTGGACCGAGTCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139629.2 |
||
| CDS-3UTR TCA 90 bp | ACCCCGAGCAGTGGATTCGCTGGGTTTGGATCGGGCACAGGAGGTAAACAGCTGCCCCATCAGAGTCACTaGTGGCCTCGATCTTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: TPSSGFAGFGSGTGGKQLPHQSH*WPRSFL Trigger: AAGGAAAGATCGAGGCCATCAGTGACTCTGATGGGG...CAGCTGTTTACCTCCTGTGCCCGATCCAAACCCAGCGAATCCACTGCTCGGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139629.2 |
||
| CDS-3UTR GCA 90 bp | TGCCTACCATGTGTCAAGCCAGTTTCACAATGGCCTGACACCTCCCAGGTGAGTCGATGCTCAGCTGCATaGGCCAGTGCAGGGTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: CLPCVKPVSQWPDTSQVSRCSAA*ASAGSA Trigger: TGCAGACCCTGCACTGGCGCATGCAGCTGAGCATCG...ACTCACCTGGGAGGTGTCAGGCCATTGTGAAACTGGCTTGACACATGGTAGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
||
| CDS-3UTR GCA 90 bp | ATAGAGAAAGAGAAGGCTCCAGGGAGGTCCAGCCCTGACAAGTGGCTCTCCAGCTGGGATTCACCTCGATaGTCAGCTGCATGCGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: IEKEKAPGRSSPDKWLSSWDSPR*SAACAS Trigger: ACTGGCGCATGCAGCTGAGCATCGAGGTGAATCCCA...GCTGGAGAGCCACTTGTCAGGGCTGGACCTCCCTGGAGCCTTCTCTTTCTCTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
||
| CDS-3UTR CCA 90 bp | TGCCTACCATGTGTCAAGCCAGTTTCACAATGGCCTGACACCTCCCAGGTGAGTAGGACTCGTCGATGCTaGTGGGGATGGGGTCGATGG | + |
|
Preference number: 4 (lower is better) Translates to: CLPCVKPVSQWPDTSQVSRTRRC*WGWGRW Trigger: CCATCGACCCCATCCCCACCAGCATCGACGAGTCCT...ACTCACCTGGGAGGTGTCAGGCCATTGTGAAACTGGCTTGACACATGGTAGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
||
| CDS-3UTR CCA 90 bp | ATAGAGAAAGAGAAGGCTCCAGGGAGGTCCAGCCCTGACAAGTGGCTCTCCAGCTCGTGCAGGTCTCCGTaGTATTGCCGTACCAGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: IEKEKAPGRSSPDKWLSSSCRSP*YCRTRD Trigger: ATCCCTGGTACGGCAATACCACGGAGACCTGCACGA...GCTGGAGAGCCACTTGTCAGGGCTGGACCTCCCTGGAGCCTTCTCTTTCTCTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
||
| CDS-3UTR CCA 90 bp | TCCTCTGACCACCATGACACTCTGTCACACGCATGCCAGCATCCGCACACACATACTTGGAGTCCCTCTTaGTGGGCCCCACAATCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SSDHHDTLSHACQHPHTHTWSPS*WAPQSC Trigger: GCACGATTGTGGGGCCCACCAAGAGGGACTCCAAGT...ATGTGTGTGCGGATGCTGGCATGCGTGTGACAGAGTGTCATGGTGGTCAGAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139629.2 |
||
| CDS-3UTR CCA 90 bp | GTCTCGCGCCTGCTGGTAAGTGCACGCATGGGTTCGTGTTCACAGTACTGTCCGCTAAGGATTTTAGGCTaGTCCTGGGCAATGGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VSRLLVSARMGSCSQYCPLRILG*SWAMGS Trigger: GGAGCCCATTGCCCAGGACCAGCCTAAAATCCTTAG...CGGACAGTACTGTGAACACGAACCCATGCGTGCACTTACCAGCAGGCGCGAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
||
| 3UTR CAA 72 bp | CAGGCTTTGGGACCCCGAGCAGTGGATTCGCTGGGTTaGGATCGGGCACAGGAGGTAAACAGCTGTGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QALGPRAVDSLG*DRAQEVNSCVL Trigger: AAGAACACAGCTGTTTACCTCCTGTGCCCGATCCAAACCCAGCGAATCCACTGCTCGGGGTCCCAAAGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139629.2 |
||
| CDS-3UTR TCA 90 bp | ATAGAGAAAGAGAAGGCTCCAGGGAGGTCCAGCCCTGACAAGTGGCTCTCCAGCCCCCATCAGAGTCACTaGTGGCCTCGATCTTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: IEKEKAPGRSSPDKWLSSPHQSH*WPRSFL Trigger: AAGGAAAGATCGAGGCCATCAGTGACTCTGATGGGG...GCTGGAGAGCCACTTGTCAGGGCTGGACCTCCCTGGAGCCTTCTCTTTCTCTAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
||
| CDS-3UTR TCA 90 bp | GTTCCTGGACACTCAGCCCAGGGTCTTAAAAACTCATTTCTGTGGTGGTGTCTCCCACCAGCCACGTGGTaGAGCTCTGGTCCCGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: VPGHSAQGLKNSFLWWCLPPATW*SSGPGR Trigger: TCTACCGGGACCAGAGCTTCACCACGTGGCTGGTGG...GAGACACCACCACAGAAATGAGTTTTTAAGACCCTGGGCTGAGTGTCCAGGAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139629.2 |
||
| CDS-3UTR GCA 90 bp | TTCCCAGCTCTGACTGAAGAGGGCAAGTCCTGTAGGGCAGAGATCCGTGGCCTTTGGCTTTGCCTCCGATaGTCTGAATACAGCCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: FPALTEEGKSCRAEIRGLWLCLR*SEYSPW Trigger: CCATGGGCTGTATTCAGAGCATCGGAGGCAAAGCCA...AAGGCCACGGATCTCTGCCCTACAGGACTTGCCCTCTTCAGTCAGAGCTGGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
||
| CDS-3UTR CCA 90 bp | TGCCTACCATGTGTCAAGCCAGTTTCACAATGGCCTGACACCTCCCAGGTGAGTTCGATCTTTCCTTCCTaGAGGTCGGGGAGCTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CLPCVKPVSQWPDTSQVSSIFPS*RSGSSQ Trigger: CTGGGAGCTCCCCGACCTCCAGGAAGGAAAGATCGA...ACTCACCTGGGAGGTGTCAGGCCATTGTGAAACTGGCTTGACACATGGTAGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
||
| 3UTR CAA 72 bp | TGCCTGCTACTGAAGGCTCCAGGCCCAACTCGAGGCTaGTGTGTTGATCCTCTCTGCACTTCTTGCAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: CLLLKAPGPTRG*CVDPLCTSCRS Trigger: AGACCTGCAAGAAGTGCAGAGAGGATCAACACACAAGCCTCGAGTTGGGCCTGGAGCCTTCAGTAGCAGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139629.2 |
||
| CDS-3UTR GCA 90 bp | GGTCTTAAAAACTCATTTCTGTGGTGGTGTCTCCAGCTGCCTGCTACTGAAGGCCGATGCTCAGCTGCATaGGCCAGTGCAGGGTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GLKNSFLWWCLQLPATEGRCSAA*ASAGSA Trigger: TGCAGACCCTGCACTGGCGCATGCAGCTGAGCATCG...GCCTTCAGTAGCAGGCAGCTGGAGACACCACCACAGAAATGAGTTTTTAAGACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139629.2 |
||
| CDS-3UTR CCA 90 bp | ACTCTGTCACACGCATGCCAGCATCCGCACACACATCACACACACGTAGTCTTATCGATCTTTCCTTCCTaGAGGTCGGGGAGCTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TLSHACQHPHTHHTHVVLSIFPS*RSGSSQ Trigger: CTGGGAGCTCCCCGACCTCCAGGAAGGAAAGATCGA...TAAGACTACGTGTGTGTGATGTGTGTGCGGATGCTGGCATGCGTGTGACAGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139629.2 |
||
| CDS-3UTR CCA 90 bp | GTTCCTGGACACTCAGCCCAGGGTCTTAAAAACTCATTTCTGTGGTGGTGTCTCTGGAGTCCCTCTTGGTaGGCCCCACAATCGTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VPGHSAQGLKNSFLWWCLWSPSW*APQSCR Trigger: CCTGCACGATTGTGGGGCCCACCAAGAGGGACTCCA...GAGACACCACCACAGAAATGAGTTTTTAAGACCCTGGGCTGAGTGTCCAGGAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139629.2 |
||
| CDS-3UTR CCA 90 bp | GTGACCAAGGACAGTTGGTGCTTATTGCTAGAAACAGTGAGTGTCCATGCCCGGACTTGGAGTCCCTCTTaGTGGGCCCCACAATCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: VTKDSWCLLLETVSVHARTWSPS*WAPQSC Trigger: GCACGATTGTGGGGCCCACCAAGAGGGACTCCAAGT...CCGGGCATGGACACTCACTGTTTCTAGCAATAAGCACCAACTGTCCTTGGTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
||
| CDS-3UTR CCA 90 bp | TGCCTACCATGTGTCAAGCCAGTTTCACAATGGCCTGACACCTCCCAGGTGAGTGGTCCCGGTAGATGTTaGTCAGTTTGGCCACGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: CLPCVKPVSQWPDTSQVSGPGRC*SVWPRC Trigger: GCAACGTGGCCAAACTGACCAACATCTACCGGGACC...ACTCACCTGGGAGGTGTCAGGCCATTGTGAAACTGGCTTGACACATGGTAGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
||
| CDS-3UTR CCA 90 bp | GGTCTTAAAAACTCATTTCTGTGGTGGTGTCTCCAGCTGCCTGCTACTGAAGGCCGGGATCACCACCAGTaGCTGCCCGTACTTGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GLKNSFLWWCLQLPATEGRDHHQ*LPVLGS Trigger: AGACCCAAGTACGGGCAGCCACTGGTGGTGATCCCG...GCCTTCAGTAGCAGGCAGCTGGAGACACCACCACAGAAATGAGTTTTTAAGACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139629.2 |
||
| 3UTR CAA 72 bp | TTACTCTGGGCTAGAAGCCGGTTTCCTCTGAGTCTGTaGACTCGGTCCAAGCTTGTCACCACAGCTCCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: LLWARSRFPLSL*TRSKLVTTAPS Trigger: CGAAGGAGCTGTGGTGACAAGCTTGGACCGAGTCAACAGACTCAGAGGAAACCGGCTTCTAGCCCAGAGTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139629.2 |
||
| CDS-3UTR TCA 90 bp | GTGACCAAGGACAGTTGGTGCTTATTGCTAGAAACAGTGAGTGTCCATGCCCGGTTGCCTCCGATGCTCTaGATACAGCCCATGGCACAC | + |
|
Preference number: 4 (lower is better) Translates to: VTKDSWCLLLETVSVHARLPPML*IQPMAH Trigger: GTGTGCCATGGGCTGTATTCAGAGCATCGGAGGCAA...CCGGGCATGGACACTCACTGTTTCTAGCAATAAGCACCAACTGTCCTTGGTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
||
| CDS-3UTR TCA 90 bp | CTCATATGCAGGGGGCCCTTGGTAAACCAAGTCATTAAAGCAGATAGGCCACCGTTGCCTCCGATGCTCTaGATACAGCCCATGGCACAC | + |
|
Preference number: 4 (lower is better) Translates to: LICRGPLVNQVIKADRPPLPPML*IQPMAH Trigger: GTGTGCCATGGGCTGTATTCAGAGCATCGGAGGCAA...CGGTGGCCTATCTGCTTTAATGACTTGGTTTACCAAGGGCCCCCTGCATATGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139629.2 |
||
| CDS-3UTR CCA 90 bp | ACTCTGTCACACGCATGCCAGCATCCGCACACACATCACACACACGTAGTCTTACTTCCCGGAAGACTCTaGCTTTGCCTCCGATGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TLSHACQHPHTHHTHVVLLPGRL*LCLRCS Trigger: AGAGCATCGGAGGCAAAGCCAGAGTCTTCCGGGAAG...TAAGACTACGTGTGTGTGATGTGTGTGCGGATGCTGGCATGCGTGTGACAGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139629.2 |
||
| CDS-3UTR TCA 90 bp | TCTGTGCTTATTACTGGTTCGAATCCAGTGATGCAGCTGTTAGTACGCTTAACGCATGACCACTTGGGCTaGGGCCCGGAAGTGGGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SVLITGSNPVMQLLVRLTHDHLG*GPEVGC Trigger: ACACCCCACTTCCGGGCCTCAGCCCAAGTGGTCATG...CGTTAAGCGTACTAACAGCTGCATCACTGGATTCGAACCAGTAATAAGCACAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
||
| CDS-3UTR TCA 90 bp | GTTTTCTGTGCTTATTACTGGTTCGAATCCAGTGATGCAGCTGTTAGTACGCTTTGGGAATGGGCGGCATaGCCACTTGGGCTGAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: VFCAYYWFESSDAAVSTLWEWAA*PLGLRP Trigger: GGGCCTCAGCCCAAGTGGTCATGCCGCCCATTCCCA...AAGCGTACTAACAGCTGCATCACTGGATTCGAACCAGTAATAAGCACAGAAAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
||
| CDS-3UTR TCA 90 bp | ACTCTGTCACACGCATGCCAGCATCCGCACACACATCACACACACGTAGTCTTAATATGGCTGCACGCCTaGATCCAACCAACGATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TLSHACQHPHTHHTHVVLIWLHA*IQPTIQ Trigger: CTGGATCGTTGGTTGGATTCAGGCGTGCAGCCATAT...TAAGACTACGTGTGTGTGATGTGTGTGCGGATGCTGGCATGCGTGTGACAGAGT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139629.2 |
||
| CDS-3UTR TCA 90 bp | AGCAGCTCAAAGCAGACATTTCTAGAAACCATGGCATCACTCAAGGACAAGTTCCCACCAGCCACGTGGTaGAGCTCTGGTCCCGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: SSSKQTFLETMASLKDKFPPATW*SSGPGR Trigger: TCTACCGGGACCAGAGCTTCACCACGTGGCTGGTGG...GAACTTGTCCTTGAGTGATGCCATGGTTTCTAGAAATGTCTGCTTTGAGCTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
||
| CDS-3UTR TCA 90 bp | GGTCTTAAAAACTCATTTCTGTGGTGGTGTCTCCAGCTGCCTGCTACTGAAGGCACTTGGGTCTCCACATaGGGACCTGTGCATCGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GLKNSFLWWCLQLPATEGTWVST*GPVHRW Trigger: CCAACGATGCACAGGTCCTCATGTGGAGACCCAAGT...GCCTTCAGTAGCAGGCAGCTGGAGACACCACCACAGAAATGAGTTTTTAAGACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139629.2 |
||
| CDS-3UTR GCA 90 bp | TTGACATTGTCTTCAAGAGTCTCGCGCCTGCTGGTAAGTGCACGCATGGGTTCGCGCCAGTGCAGGGTCTaGAGGATGATCATATCATTG | + |
|
Preference number: 4 (lower is better) Translates to: LTLSSRVSRLLVSARMGSRQCRV*RMIISL Trigger: CAATGATATGATCATCCTGCAGACCCTGCACTGGCG...CGAACCCATGCGTGCACTTACCAGCAGGCGCGAGACTCTTGAAGACAATGTCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
||
| CDS-3UTR GCA 90 bp | GGAGGTAAACAGCTGTGTTCTTTCCTCCCACAGAAGAATAGGTGTTCCTGGACAATCACCACCAGTGGCTaGCCGTACTTGGGTCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GGKQLCSFLPQKNRCSWTITTSG*PYLGLH Trigger: GTGGAGACCCAAGTACGGGCAGCCACTGGTGGTGAT...TGTCCAGGAACACCTATTCTTCTGTGGGAGGAAAGAACACAGCTGTTTACCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139629.2 |
||
| CDS-3UTR CCA 90 bp | TGCCTACCATGTGTCAAGCCAGTTTCACAATGGCCTGACACCTCCCAGGTGAGTTGGGGATGGGGTCGATaGAGGCTTTCACATCAATCA | + |
|
Preference number: 4 (lower is better) Translates to: CLPCVKPVSQWPDTSQVSWGWGR*RLSHQS Trigger: TGATTGATGTGAAAGCCTCCATCGACCCCATCCCCA...ACTCACCTGGGAGGTGTCAGGCCATTGTGAAACTGGCTTGACACATGGTAGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
||
| CDS-3UTR CCA 90 bp | GTTTTCTGTGCTTATTACTGGTTCGAATCCAGTGATGCAGCTGTTAGTACGCTTGGCGGCATGACCACTTaGGCTGAGGCCCGGAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VFCAYYWFESSDAAVSTLGGMTT*AEARKW Trigger: CCACTTCCGGGCCTCAGCCCAAGTGGTCATGCCGCC...AAGCGTACTAACAGCTGCATCACTGGATTCGAACCAGTAATAAGCACAGAAAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
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| CDS-3UTR CCA 90 bp | AAAGGGAAACATGATGACTTATCTTCATATCTCATATGCAGGGGGCCCTTGGTAGGCGGCATGACCACTTaGGCTGAGGCCCGGAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KGKHDDLSSYLICRGPLVGGMTT*AEARKW Trigger: CCACTTCCGGGCCTCAGCCCAAGTGGTCATGCCGCC...TACCAAGGGCCCCCTGCATATGAGATATGAAGATAAGTCATCATGTTTCCCTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139629.2 |
||
| CDS-3UTR GCA 90 bp | GTTCCTGGACACTCAGCCCAGGGTCTTAAAAACTCATTTCTGTGGTGGTGTCTCTGGCTTTGCCTCCGATaGTCTGAATACAGCCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: VPGHSAQGLKNSFLWWCLWLCLR*SEYSPW Trigger: CCATGGGCTGTATTCAGAGCATCGGAGGCAAAGCCA...GAGACACCACCACAGAAATGAGTTTTTAAGACCCTGGGCTGAGTGTCCAGGAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139629.2 |
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| CDS-3UTR CCA 90 bp | TCTGTGCTTATTACTGGTTCGAATCCAGTGATGCAGCTGTTAGTACGCTTAACGCGGGATCACCACCAGTaGCTGCCCGTACTTGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SVLITGSNPVMQLLVRLTRDHHQ*LPVLGS Trigger: AGACCCAAGTACGGGCAGCCACTGGTGGTGATCCCG...CGTTAAGCGTACTAACAGCTGCATCACTGGATTCGAACCAGTAATAAGCACAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
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| CDS-3UTR GCA 90 bp | GTTCCTGGACACTCAGCCCAGGGTCTTAAAAACTCATTTCTGTGGTGGTGTCTCGGAAGACTCTGGCTTTaGCTCCGATGCTCTGAATAC | + |
|
Preference number: 4 (lower is better) Translates to: VPGHSAQGLKNSFLWWCLGRLWL*LRCSEY Trigger: GTATTCAGAGCATCGGAGGCAAAGCCAGAGTCTTCC...GAGACACCACCACAGAAATGAGTTTTTAAGACCCTGGGCTGAGTGTCCAGGAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139629.2 |
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| CDS-3UTR CCA 90 bp | GTGTTCCTGGACACTCAGCCCAGGGTCTTAAAAACTCATTTCTGTGGTGGTGTCTGGGGATGGGGTCGATaGAGGCTTTCACATCAATCA | + |
|
Preference number: 4 (lower is better) Translates to: VFLDTQPRVLKTHFCGGVWGWGR*RLSHQS Trigger: TGATTGATGTGAAAGCCTCCATCGACCCCATCCCCA...GACACCACCACAGAAATGAGTTTTTAAGACCCTGGGCTGAGTGTCCAGGAACAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000139629.2 |
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| CDS-3UTR CCA 90 bp | GGAGGTAAACAGCTGTGTTCTTTCCTCCCACAGAAGAATAGGTGTTCCTGGACACTAAGGATTTTAGGCTaGTCCTGGGCAATGGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GGKQLCSFLPQKNRCSWTLRILG*SWAMGS Trigger: GGAGCCCATTGCCCAGGACCAGCCTAAAATCCTTAG...TGTCCAGGAACACCTATTCTTCTGTGGGAGGAAAGAACACAGCTGTTTACCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139629.2 |
||
| CDS-3UTR TCA 90 bp | TCTGTGCTTATTACTGGTTCGAATCCAGTGATGCAGCTGTTAGTACGCTTAACGACTTGGGTCTCCACATaGGGACCTGTGCATCGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SVLITGSNPVMQLLVRLTTWVST*GPVHRW Trigger: CCAACGATGCACAGGTCCTCATGTGGAGACCCAAGT...CGTTAAGCGTACTAACAGCTGCATCACTGGATTCGAACCAGTAATAAGCACAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
||
| CDS-3UTR GCA 90 bp | AAAGGGAAACATGATGACTTATCTTCATATCTCATATGCAGGGGGCCCTTGGTAAGCTGCATGCGCCAGTaGAGGGTCTGCAGGATGATC | + |
|
Preference number: 4 (lower is better) Translates to: KGKHDDLSSYLICRGPLVSCMRQ*RVCRMI Trigger: GATCATCCTGCAGACCCTGCACTGGCGCATGCAGCT...TACCAAGGGCCCCCTGCATATGAGATATGAAGATAAGTCATCATGTTTCCCTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139629.2 |
||
| CDS-3UTR GCA 90 bp | GTTTTCTGTGCTTATTACTGGTTCGAATCCAGTGATGCAGCTGTTAGTACGCTTATCACCACCAGTGGCTaGCCGTACTTGGGTCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: VFCAYYWFESSDAAVSTLITTSG*PYLGLH Trigger: GTGGAGACCCAAGTACGGGCAGCCACTGGTGGTGAT...AAGCGTACTAACAGCTGCATCACTGGATTCGAACCAGTAATAAGCACAGAAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
||
| 3UTR CAA 72 bp | GTTCGTGTTCACAGTACTGTCCGTGACCAAGGACAGTaGGTGCTTATTGCTAGAAACAGTGAGTGTCCATGC | + |
|
Preference number: 4 (lower is better) Translates to: VRVHSTVRDQGQ*VLIARNSECPC Trigger: GCATGGACACTCACTGTTTCTAGCAATAAGCACCAACTGTCCTTGGTCACGGACAGTACTGTGAACACGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
||
| CDS-3UTR CAA 90 bp | ACGCAGACGCCCAGGAGGAGGAGCAGGGTTCAGGTGAGCCTCCCCTCTTCCCAGTGGCCCAGGGGCCGGTaGGGATTCACCTCGATGCTC | + |
|
Preference number: 5 (lower is better) Translates to: TQTPRRRSRVQVSLPSSQWPRGR*GFTSML Trigger: GAGCATCGAGGTGAATCCCAACCGGCCCCTGGGCCA...CTGGGAAGAGGGGAGGCTCACCTGAACCCTGCTCCTCCTCCTGGGCGTCTGCGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
||
| CDS CCA 90 bp | ATTTTAGGCTGGTCCTGGGCAATGGGCTCCCGCAGCCTGGCGCGCTaGCCCAGGGGCCGGTTGGGATTCACCTCGATGCTCAGCTGCATG | + |
|
Preference number: 5 (lower is better) Translates to: ILGWSWAMGSRSLAR*PRGRLGFTSMLSCM Trigger: CATGCAGCTGAGCATCGAGGTGAATCCCAACCGGCCCCTGGGCCAGCGCGCCAGGCTGCGGGAGCCCATTGCCCAGGACCAGCCTAAAAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056406.7 ENSMUST00000139629.2 |
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| CDS-3UTR CAA 90 bp | ACGCAGACGCCCAGGAGGAGGAGCAGGGTTCAGGTGAGCCTCCCCTCTTCCCAGAGGACCTGTGCATCGTaGGCGTTGGGCTTGACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: TQTPRRRSRVQVSLPSSQRTCAS*ALGLTR Trigger: CCTGGTCAAGCCCAACGCCAACGATGCACAGGTCCT...CTGGGAAGAGGGGAGGCTCACCTGAACCCTGCTCCTCCTCCTGGGCGTCTGCGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
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| CDS GCA 90 bp | GCGCGCTGGCCCAGGGGCCGGTTGGGATTCACCTCGATGCTCAGCTaGATGCGCCAGTGCAGGGTCTGCAGGATGATCATATCATTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: ARWPRGRLGFTSMLS*MRQCRVCRMIISLV Trigger: CACCAATGATATGATCATCCTGCAGACCCTGCACTGGCGCATGCAGCTGAGCATCGAGGTGAATCCCAACCGGCCCCTGGGCCAGCGCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056406.7 ENSMUST00000139629.2 |
||
| CDS-3UTR CAA 90 bp | CTCAGTGGGAGGCGTGCTGAGCCCTCAGGAAGCCTTAGCTTGCACTTCGCACTGTGTGCATCGTTGGCGTaGGGCTTGACCAGGGCACTG | + |
|
Preference number: 5 (lower is better) Translates to: LSGRRAEPSGSLSLHFALCASLA*GLTRAL Trigger: CAGTGCCCTGGTCAAGCCCAACGCCAACGATGCACA...CAGTGCGAAGTGCAAGCTAAGGCTTCCTGAGGGCTCAGCACGCCTCCCACTGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139629.2 |
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| CDS-3UTR CAA 90 bp | GGAGCGCAAGATATGTGGGTTTGGGGGTCCCCATGTCCAGAGCAGTTCGGGCCAAGTGGCTGCCCGTACTaGGGTCTCCACATGAGGACC | + |
|
Preference number: 5 (lower is better) Translates to: GAQDMWVWGSPCPEQFGPSGCPY*GLHMRT Trigger: GGTCCTCATGTGGAGACCCAAGTACGGGCAGCCACT...TGGCCCGAACTGCTCTGGACATGGGGACCCCCAAACCCACATATCTTGCGCTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
||
| CDS-3UTR CAA 90 bp | GGTCCAAGCTTGTCACCACAGCTCCTTCGGGTCCTTGTCCCAGCAGACCTCAGGATCCAGGTCTCCTTCTaGGGAATGGGCGGCATGACC | + |
|
Preference number: 5 (lower is better) Translates to: GPSLSPQLLRVLVPADLRIQVSF*GMGGMT Trigger: GGTCATGCCGCCCATTCCCAAGAAGGAGACCTGGAT...CCTGAGGTCTGCTGGGACAAGGACCCGAAGGAGCTGTGGTGACAAGCTTGGACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139629.2 |
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| CDS-3UTR CAA 90 bp | GGTCCAAGCTTGTCACCACAGCTCCTTCGGGTCCTTGTCCCAGCAGACCTCAGGAACTTGGAGTCCCTCTaGGTGGGCCCCACAATCGTG | + |
|
Preference number: 5 (lower is better) Translates to: GPSLSPQLLRVLVPADLRNLESL*VGPTIV Trigger: CACGATTGTGGGGCCCACCAAGAGGGACTCCAAGTT...CCTGAGGTCTGCTGGGACAAGGACCCGAAGGAGCTGTGGTGACAAGCTTGGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139629.2 |
||
| CDS TCA 90 bp | CCGTGGTATTGCCGTACCAGGGATAGTTCACCCCATCAGAGTCACTaGTGGCCTCGATCTTTCCTTCCTGGAGGTCGGGGAGCTCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PWYCRTRDSSPHQSH*WPRSFLPGGRGAPS Trigger: GCTGGGAGCTCCCCGACCTCCAGGAAGGAAAGATCGAGGCCATCAGTGACTCTGATGGGGTGAACTATCCCTGGTACGGCAATACCACGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056406.7 ENSMUST00000139629.2 |
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| CDS-3UTR CAA 90 bp | TTCCCAGCTCTGACTGAAGAGGGCAAGTCCTGTAGGGCAGAGATCCGTGGCCTTTGTGCATCGTTGGCGTaGGGCTTGACCAGGGCACTG | + |
|
Preference number: 5 (lower is better) Translates to: FPALTEEGKSCRAEIRGLCASLA*GLTRAL Trigger: CAGTGCCCTGGTCAAGCCCAACGCCAACGATGCACA...AAGGCCACGGATCTCTGCCCTACAGGACTTGCCCTCTTCAGTCAGAGCTGGGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
||
| CDS-3UTR CAA 90 bp | AGGGTGTCCAGGAGGAGAGCGGGAAGTGTGTTTGCTCTCAGGGACCTGGAGTTAAGGACCTGTGCATCGTaGGCGTTGGGCTTGACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: RVSRRRAGSVFALRDLELRTCAS*ALGLTR Trigger: CCTGGTCAAGCCCAACGCCAACGATGCACAGGTCCT...TAACTCCAGGTCCCTGAGAGCAAACACACTTCCCGCTCTCCTCCTGGACACCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139629.2 |
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| CDS-3UTR CAA 90 bp | TTGACTCGGTCCAAGCTTGTCACCACAGCTCCTTCGGGTCCTTGTCCCAGCAGAAGTGGCTGCCCGTACTaGGGTCTCCACATGAGGACC | + |
|
Preference number: 5 (lower is better) Translates to: LTRSKLVTTAPSGPCPSRSGCPY*GLHMRT Trigger: GGTCCTCATGTGGAGACCCAAGTACGGGCAGCCACT...TCTGCTGGGACAAGGACCCGAAGGAGCTGTGGTGACAAGCTTGGACCGAGTCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139629.2 |
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| CDS GCA 90 bp | AGGGGCCGGTTGGGATTCACCTCGATGCTCAGCTGCATGCGCCAGTaGAGGGTCTGCAGGATGATCATATCATTGGTGGAGGTGTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: RGRLGFTSMLSCMRQ*RVCRMIISLVEVLV Trigger: CACCAACACCTCCACCAATGATATGATCATCCTGCAGACCCTGCACTGGCGCATGCAGCTGAGCATCGAGGTGAATCCCAACCGGCCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056406.7 ENSMUST00000139629.2 |
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| CDS-3UTR CAA 90 bp | GGAGCGCAAGATATGTGGGTTTGGGGGTCCCCATGTCCAGAGCAGTTCGGGCCAATGCTGATGATGAACTaGGAGTCCCTCTTGGTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: GAQDMWVWGSPCPEQFGPMLMMN*ESLLVG Trigger: GCCCACCAAGAGGGACTCCAAGTTCATCATCAGCAT...TGGCCCGAACTGCTCTGGACATGGGGACCCCCAAACCCACATATCTTGCGCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
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| CDS-3UTR CAA 90 bp | GTTCCTGGACACTCAGCCCAGGGTCTTAAAAACTCATTTCTGTGGTGGTGTCTCTGGCCCAGGGGCCGGTaGGGATTCACCTCGATGCTC | + |
|
Preference number: 5 (lower is better) Translates to: VPGHSAQGLKNSFLWWCLWPRGR*GFTSML Trigger: GAGCATCGAGGTGAATCCCAACCGGCCCCTGGGCCA...GAGACACCACCACAGAAATGAGTTTTTAAGACCCTGGGCTGAGTGTCCAGGAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139629.2 |
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| CDS TCA 90 bp | ACGGTAATCCCTTCCCGGAAGACTCTGGCTTTGCCTCCGATGCTCTaGATACAGCCCATGGCACACAGGACCGCTCTAATCTCCAGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: TVIPSRKTLALPPML*IQPMAHRTALISRE Trigger: TTCCCTGGAGATTAGAGCGGTCCTGTGTGCCATGGGCTGTATTCAGAGCATCGGAGGCAAAGCCAGAGTCTTCCGGGAAGGGATTACCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056406.7 ENSMUST00000139629.2 |
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| CDS-3UTR CAA 90 bp | TTGACATTGTCTTCAAGAGTCTCGCGCCTGCTGGTAAGTGCACGCATGGGTTCGATCCAGGTCTCCTTCTaGGGAATGGGCGGCATGACC | + |
|
Preference number: 5 (lower is better) Translates to: LTLSSRVSRLLVSARMGSIQVSF*GMGGMT Trigger: GGTCATGCCGCCCATTCCCAAGAAGGAGACCTGGAT...CGAACCCATGCGTGCACTTACCAGCAGGCGCGAGACTCTTGAAGACAATGTCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
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| CDS-3UTR CAA 90 bp | GTCTCGCGCCTGCTGGTAAGTGCACGCATGGGTTCGTGTTCACAGTACTGTCCGAGGATGATCATATCATaGGTGGAGGTGTTGGTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: VSRLLVSARMGSCSQYCPRMIIS*VEVLVA Trigger: GGCCACCAACACCTCCACCAATGATATGATCATCCT...CGGACAGTACTGTGAACACGAACCCATGCGTGCACTTACCAGCAGGCGCGAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
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| CDS-3UTR CAA 90 bp | GTCTCGCGCCTGCTGGTAAGTGCACGCATGGGTTCGTGTTCACAGTACTGTCCGGGGATGGGCTCATTCTaGCTAAGGATTTTAGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: VSRLLVSARMGSCSQYCPGMGSF*LRILGW Trigger: CCAGCCTAAAATCCTTAGCAAGAATGAGCCCATCCC...CGGACAGTACTGTGAACACGAACCCATGCGTGCACTTACCAGCAGGCGCGAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
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| CDS-3UTR CAA 90 bp | TTGACTCGGTCCAAGCTTGTCACCACAGCTCCTTCGGGTCCTTGTCCCAGCAGAAGGATGATCATATCATaGGTGGAGGTGTTGGTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LTRSKLVTTAPSGPCPSRRMIIS*VEVLVA Trigger: GGCCACCAACACCTCCACCAATGATATGATCATCCT...TCTGCTGGGACAAGGACCCGAAGGAGCTGTGGTGACAAGCTTGGACCGAGTCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139629.2 |
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| CDS-3UTR CAA 90 bp | CTCATATGCAGGGGGCCCTTGGTAAACCAAGTCATTAAAGCAGATAGGCCACCGGGGATGGGCTCATTCTaGCTAAGGATTTTAGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LICRGPLVNQVIKADRPPGMGSF*LRILGW Trigger: CCAGCCTAAAATCCTTAGCAAGAATGAGCCCATCCC...CGGTGGCCTATCTGCTTTAATGACTTGGTTTACCAAGGGCCCCCTGCATATGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000139629.2 |
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| CDS-3UTR CAA 90 bp | GTTTTCTGTGCTTATTACTGGTTCGAATCCAGTGATGCAGCTGTTAGTACGCTTAACTTGGAGTCCCTCTaGGTGGGCCCCACAATCGTG | + |
|
Preference number: 5 (lower is better) Translates to: VFCAYYWFESSDAAVSTLNLESL*VGPTIV Trigger: CACGATTGTGGGGCCCACCAAGAGGGACTCCAAGTT...AAGCGTACTAACAGCTGCATCACTGGATTCGAACCAGTAATAAGCACAGAAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056406.7 |
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| CDS CCA 72 bp | GCTCCCGCAGCCTGGCGCGCTGGCCCAGGGGCCGGTTaGGATTCACCTCGATGCTCAGCTGCATGCGCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: APAAWRAGPGAG*DSPRCSAACAS Trigger: ACTGGCGCATGCAGCTGAGCATCGAGGTGAATCCCAACCGGCCCCTGGGCCAGCGCGCCAGGCTGCGGGAGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056406.7 ENSMUST00000139629.2 |
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| CDS CCA 72 bp | TGGTCCTGGGCAATGGGCTCCCGCAGCCTGGCGCGCTaGCCCAGGGGCCGGTTGGGATTCACCTCGATGCTC | + |
|
Preference number: 6 (lower is better) Translates to: WSWAMGSRSLAR*PRGRLGFTSML Trigger: GAGCATCGAGGTGAATCCCAACCGGCCCCTGGGCCAGCGCGCCAGGCTGCGGGAGCCCATTGCCCAGGACCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056406.7 ENSMUST00000139629.2 |
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| CDS GCA 72 bp | CGCGCTGGCCCAGGGGCCGGTTGGGATTCACCTCGATaGTCAGCTGCATGCGCCAGTGCAGGGTCTGCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: RAGPGAGWDSPR*SAACASAGSAG Trigger: TCCTGCAGACCCTGCACTGGCGCATGCAGCTGAGCATCGAGGTGAATCCCAACCGGCCCCTGGGCCAGCGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056406.7 ENSMUST00000139629.2 |
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| CDS CCA 72 bp | GGCGGGATGGGCTCATTCTTGCTAAGGATTTTAGGCTaGTCCTGGGCAATGGGCTCCCGCAGCCTGGCGCGC | + |
|
Preference number: 6 (lower is better) Translates to: GGMGSFLLRILG*SWAMGSRSLAR Trigger: GCGCGCCAGGCTGCGGGAGCCCATTGCCCAGGACCAGCCTAAAATCCTTAGCAAGAATGAGCCCATCCCGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056406.7 ENSMUST00000139629.2 |
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| CDS CAA 90 bp | TTGGCGTTGGGCTTGACCAGGGCACTGGGCGGGATGGGCTCATTCTaGCTAAGGATTTTAGGCTGGTCCTGGGCAATGGGCTCCCGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: LALGLTRALGGMGSF*LRILGWSWAMGSRS Trigger: GCTGCGGGAGCCCATTGCCCAGGACCAGCCTAAAATCCTTAGCAAGAATGAGCCCATCCCGCCCAGTGCCCTGGTCAAGCCCAACGCCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056406.7 ENSMUST00000139629.2 |
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| CDS GCA 72 bp | CCCAGGGGCCGGTTGGGATTCACCTCGATGCTCAGCTaGATGCGCCAGTGCAGGGTCTGCAGGATGATCATA | + |
|
Preference number: 6 (lower is better) Translates to: PRGRLGFTSMLS*MRQCRVCRMII Trigger: TATGATCATCCTGCAGACCCTGCACTGGCGCATGCAGCTGAGCATCGAGGTGAATCCCAACCGGCCCCTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056406.7 ENSMUST00000139629.2 |
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| CDS CCA 72 bp | CCCTCTTGGTGGGCCCCACAATCGTGCAGGTCTCCGTaGTATTGCCGTACCAGGGATAGTTCACCCCATCAG | + |
|
Preference number: 6 (lower is better) Translates to: PSWWAPQSCRSP*YCRTRDSSPHQ Trigger: CTGATGGGGTGAACTATCCCTGGTACGGCAATACCACGGAGACCTGCACGATTGTGGGGCCCACCAAGAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056406.7 ENSMUST00000139629.2 |
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| CDS CAA 72 bp | GGCTTGACCAGGGCACTGGGCGGGATGGGCTCATTCTaGCTAAGGATTTTAGGCTGGTCCTGGGCAATGGGC | + |
|
Preference number: 6 (lower is better) Translates to: GLTRALGGMGSF*LRILGWSWAMG Trigger: GCCCATTGCCCAGGACCAGCCTAAAATCCTTAGCAAGAATGAGCCCATCCCGCCCAGTGCCCTGGTCAAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056406.7 ENSMUST00000139629.2 |
||
| CDS GCA 72 bp | TCCGATAGCGCAATACCACGCTGGAGGACTCGTCGATaGTGGTGGGGATGGGGTCGATGGAGGCTTTCACAT | + |
|
Preference number: 6 (lower is better) Translates to: SDSAIPRWRTRR*WWGWGRWRLSH Trigger: ATGTGAAAGCCTCCATCGACCCCATCCCCACCAGCATCGACGAGTCCTCCAGCGTGGTATTGCGCTATCGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056406.7 ENSMUST00000139629.2 |
||
| CDS GCA 72 bp | TGGTGGGCCCCACAATCGTGCAGGTCTCCGTGGTATTaGCGTACCAGGGATAGTTCACCCCATCAGAGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: WWAPQSCRSPWY*RTRDSSPHQSH Trigger: GTGACTCTGATGGGGTGAACTATCCCTGGTACGGCAATACCACGGAGACCTGCACGATTGTGGGGCCCACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056406.7 ENSMUST00000139629.2 |
||
| CDS TCA 72 bp | CCTTCCCGGAAGACTCTGGCTTTGCCTCCGATGCTCTaGATACAGCCCATGGCACACAGGACCGCTCTAATC | + |
|
Preference number: 6 (lower is better) Translates to: PSRKTLALPPML*IQPMAHRTALI Trigger: GATTAGAGCGGTCCTGTGTGCCATGGGCTGTATTCAGAGCATCGGAGGCAAAGCCAGAGTCTTCCGGGAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056406.7 ENSMUST00000139629.2 |
||
| CDS TCA 72 bp | TGCCGTACCAGGGATAGTTCACCCCATCAGAGTCACTaGTGGCCTCGATCTTTCCTTCCTGGAGGTCGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: CRTRDSSPHQSH*WPRSFLPGGRG Trigger: TCCCCGACCTCCAGGAAGGAAAGATCGAGGCCATCAGTGACTCTGATGGGGTGAACTATCCCTGGTACGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056406.7 ENSMUST00000139629.2 |
||
| CDS TCA 72 bp | TGCTCAGCTGCATGCGCCAGTGCAGGGTCTGCAGGATaGTCATATCATTGGTGGAGGTGTTGGTGGCCACCA | + |
|
Preference number: 6 (lower is better) Translates to: CSAACASAGSAG*SYHWWRCWWPP Trigger: TGGTGGCCACCAACACCTCCACCAATGATATGATCATCCTGCAGACCCTGCACTGGCGCATGCAGCTGAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056406.7 ENSMUST00000139629.2 |
||
| CDS CCA 72 bp | GATAGCGCAATACCACGCTGGAGGACTCGTCGATGCTaGTGGGGATGGGGTCGATGGAGGCTTTCACATCAA | + |
|
Preference number: 6 (lower is better) Translates to: DSAIPRWRTRRC*WGWGRWRLSHQ Trigger: TTGATGTGAAAGCCTCCATCGACCCCATCCCCACCAGCATCGACGAGTCCTCCAGCGTGGTATTGCGCTATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056406.7 ENSMUST00000139629.2 |
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| CDS GCA 72 bp | ACCTCGATGCTCAGCTGCATGCGCCAGTGCAGGGTCTaGAGGATGATCATATCATTGGTGGAGGTGTTGGTG | + |
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Preference number: 6 (lower is better) Translates to: TSMLSCMRQCRV*RMIISLVEVLV Trigger: CACCAACACCTCCACCAATGATATGATCATCCTGCAGACCCTGCACTGGCGCATGCAGCTGAGCATCGAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056406.7 ENSMUST00000139629.2 |
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| CDS GCA 72 bp | TTGGGATTCACCTCGATGCTCAGCTGCATGCGCCAGTaGAGGGTCTGCAGGATGATCATATCATTGGTGGAG | + |
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Preference number: 6 (lower is better) Translates to: LGFTSMLSCMRQ*RVCRMIISLVE Trigger: CTCCACCAATGATATGATCATCCTGCAGACCCTGCACTGGCGCATGCAGCTGAGCATCGAGGTGAATCCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056406.7 ENSMUST00000139629.2 |
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| CDS CAA 72 bp | TTATCGTTCATGCTGATGATGAACTTGGAGTCCCTCTaGGTGGGCCCCACAATCGTGCAGGTCTCCGTGGTA | + |
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Preference number: 6 (lower is better) Translates to: LSFMLMMNLESL*VGPTIVQVSVV Trigger: TACCACGGAGACCTGCACGATTGTGGGGCCCACCAAGAGGGACTCCAAGTTCATCATCAGCATGAACGATAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056406.7 ENSMUST00000139629.2 |
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