Pregenerated sensors for FAM76B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037808Ensembl transcript IDs: ENSMUST00000059579.12, ENSMUST00000156680.2, ENSMUST00000213416.2
Found 128 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CACATTCCTAAGAGAAAGAAGTCATATGGTGTGGCCAGCAGTGCCTaGAGGTTTAGAATTCACCTTGAAGCCAGAACTAACATCAGAAGC | + |
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Preference number: 1 (lower is better) Translates to: HIPKRKKSYGVASSA*RFRIHLEARTNIRS Trigger: GCTTCTGATGTTAGTTCTGGCTTCAAGGTGAATTCTAAACCTTCAGGCACTGCTGGCCACACCATATGACTTCTTTCTCTTAGGAATGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059579.12 ENSMUST00000156680.2 |
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| 3UTR GCA 90 bp | CTGGTTTTGATAATTATCAACATACAGCCAATATTGCTTCTTCCATaGCTCGATCCCTCTCTCCCTTATTATGAAGCAAATCTAAGAAAT | + |
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Preference number: 1 (lower is better) Translates to: LVLIIINIQPILLLP*LDPSLPYYEANLRN Trigger: ATTTCTTAGATTTGCTTCATAATAAGGGAGAGAGGGATCGAGGCATGGAAGAAGCAATATTGGCTGTATGTTGATAATTATCAAAACCAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213416.2 |
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| 3UTR CAA 90 bp | ATGAATGCAGCAGATCCTGCAGACAGGAATCCCCACAGTAAGGCATaGTCTACCAAAGTGGAAAACAGTGAGCGAGCGAGTGTGCTTCTG | + |
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Preference number: 2 (lower is better) Translates to: MNAADPADRNPHSKA*STKVENSERASVLL Trigger: CAGAAGCACACTCGCTCGCTCACTGTTTTCCACTTTGGTAGACAATGCCTTACTGTGGGGATTCCTGTCTGCAGGATCTGCTGCATTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059579.12 ENSMUST00000156680.2 |
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| 3UTR-3UTR GCA 90 bp | ACATGTGACCAGCTTAACAGGCTCATCGGAAAATGCATATTTAGACCAATATACGCAAAGCCCCACCCCTaGTGCTGCTCTGCCAGCCAC | + |
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Preference number: 2 (lower is better) Translates to: TCDQLNRLIGKCIFRPIYAKPHP*CCSASH Trigger: GTGGCTGGCAGAGCAGCAGCAGGGGTGGGGCTTTGC...GTATATTGGTCTAAATATGCATTTTCCGATGAGCCTGTTAAGCTGGTCACATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000059579.12 ENSMUST00000156680.2 |
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| 3UTR-3UTR GCA 90 bp | GACTTTATGAATGCAGCAGATCCTGCAGACAGGAATCCCCACAGTAAGGCATTGGAATGCAGCAGATCCTaGAGACAGGAATCCCCACAG | + |
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Preference number: 2 (lower is better) Translates to: DFMNAADPADRNPHSKALECSRS*RQESPQ Trigger: CTGTGGGGATTCCTGTCTGCAGGATCTGCTGCATTC...CAATGCCTTACTGTGGGGATTCCTGTCTGCAGGATCTGCTGCATTCATAAAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059579.12 ENSMUST00000156680.2 |
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| 3UTR-3UTR CCA 90 bp | GACAGGAATCCCCACAGTAAGGCATTGTCTACCAAAGTGGAAAACAGTGAGCGAAGAAGTCATATGGTGTaGCCAGCAGTGCCTGAAGGT | + |
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Preference number: 2 (lower is better) Translates to: DRNPHSKALSTKVENSERRSHMV*PAVPEG Trigger: ACCTTCAGGCACTGCTGGCCACACCATATGACTTCT...TCGCTCACTGTTTTCCACTTTGGTAGACAATGCCTTACTGTGGGGATTCCTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059579.12 ENSMUST00000156680.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGACAGGTCCACGTTTAAAGAGTATCAATTCATTAGATCAATACACTACAGAGAGCGAGTGTGCTTCTaGGGCCCCAGGACAGCACAC | + |
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Preference number: 2 (lower is better) Translates to: LDRSTFKEYQFIRSIHYRERVCF*GPRTAH Trigger: GTGTGCTGTCCTGGGGCCTCAGAAGCACACTCGCTC...TCTGTAGTGTATTGATCTAATGAATTGATACTCTTTAAACGTGGACCTGTCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059579.12 ENSMUST00000156680.2 |
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| 3UTR-3UTR GCA 90 bp | ACGTTTAAAGAGTATCAATTCATTAGATCAATACACTACAGATCTGGGACTGAGAAGCCCCACCCCTGCTaGTGCTCTGCCAGCCACTCC | + |
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Preference number: 2 (lower is better) Translates to: TFKEYQFIRSIHYRSGTEKPHPC*CSASHS Trigger: GGAGTGGCTGGCAGAGCAGCAGCAGGGGTGGGGCTT...CTCAGTCCCAGATCTGTAGTGTATTGATCTAATGAATTGATACTCTTTAAACGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059579.12 ENSMUST00000156680.2 |
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| 3UTR-3UTR GCA 90 bp | ACGTTTAAAGAGTATCAATTCATTAGATCAATACACTACAGATCTGGGACTGAGGCAAAGCCCCACCCCTaGTGCTGCTCTGCCAGCCAC | + |
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Preference number: 2 (lower is better) Translates to: TFKEYQFIRSIHYRSGTEAKPHP*CCSASH Trigger: GTGGCTGGCAGAGCAGCAGCAGGGGTGGGGCTTTGC...CTCAGTCCCAGATCTGTAGTGTATTGATCTAATGAATTGATACTCTTTAAACGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059579.12 ENSMUST00000156680.2 |
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| 3UTR-3UTR CCA 90 bp | ATGAATGCAGCAGATCCTGCAGACAGGAATCCCCACAGTAAGGCATTGTCTACCGTAGTTCTCTGTTTTTaGCCTGGAGTTGTTCCACAG | + |
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Preference number: 2 (lower is better) Translates to: MNAADPADRNPHSKALSTVVLCF*PGVVPQ Trigger: CTGTGGAACAACTCCAGGCCAAAAACAGAGAACTAC...GGTAGACAATGCCTTACTGTGGGGATTCCTGTCTGCAGGATCTGCTGCATTCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156680.2 |
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| 3UTR-3UTR TCA 90 bp | AATAAGGACTTTATGAATGCAGCAGATCCTGCAGACAGGAATCCCCACAGTAAGAGGACAGCACACAGCTaGCTCTTACCAAAGCTGACT | + |
|
Preference number: 2 (lower is better) Translates to: NKDFMNAADPADRNPHSKRTAHS*LLPKLT Trigger: AGTCAGCTTTGGTAAGAGTCAGCTGTGTGCTGTCCT...CTTACTGTGGGGATTCCTGTCTGCAGGATCTGCTGCATTCATAAAGTCCTTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059579.12 ENSMUST00000156680.2 |
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| 3UTR-3UTR TCA 90 bp | GACAGGAATCCCCACAGTAAGGCATTGTCTACCAAAGTGGAAAACAGTGAGCGAGTAATAAGGACTTTATaGATGCAGCAGATCCTGCAG | + |
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Preference number: 2 (lower is better) Translates to: DRNPHSKALSTKVENSERVIRTL*MQQILQ Trigger: CTGCAGGATCTGCTGCATTCATAAAGTCCTTATTAC...TCGCTCACTGTTTTCCACTTTGGTAGACAATGCCTTACTGTGGGGATTCCTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059579.12 ENSMUST00000156680.2 |
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| 3UTR-3UTR TCA 90 bp | ATGAATGCAGCAGATCCTGCAGACAGGAATCCCCACAGTAAGGCATTGTCTACCTTTGACTCTTGGTATTaGAAGTCTGCCTTCAGTTCA | + |
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Preference number: 2 (lower is better) Translates to: MNAADPADRNPHSKALSTFDSWY*KSAFSS Trigger: TGAACTGAAGGCAGACTTTCAATACCAAGAGTCAAA...GGTAGACAATGCCTTACTGTGGGGATTCCTGTCTGCAGGATCTGCTGCATTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156680.2 |
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| 3UTR-3UTR GCA 90 bp | AATAAGGACTTTATGAATGCAGCAGATCCTGCAGACAGGAATCCCCACAGTAAGTACACAGTGCACCTGTaGACTCCACACCATCAATAC | + |
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Preference number: 2 (lower is better) Translates to: NKDFMNAADPADRNPHSKYTVHL*TPHHQY Trigger: GTATTGATGGTGTGGAGTGCACAGGTGCACTGTGTA...CTTACTGTGGGGATTCCTGTCTGCAGGATCTGCTGCATTCATAAAGTCCTTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059579.12 ENSMUST00000156680.2 |
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| 3UTR-3UTR GCA 90 bp | AATAAGGACTTTATGAATGCAGCAGATCCTGCAGACAGGAATCCCCACAGTAAGTTGCATTTTACACAGTaGACCTGTGCACTCCACACC | + |
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Preference number: 2 (lower is better) Translates to: NKDFMNAADPADRNPHSKLHFTQ*TCALHT Trigger: GGTGTGGAGTGCACAGGTGCACTGTGTAAAATGCAA...CTTACTGTGGGGATTCCTGTCTGCAGGATCTGCTGCATTCATAAAGTCCTTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059579.12 ENSMUST00000156680.2 |
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| 3UTR-3UTR CCA 90 bp | GACTTTATGAATGCAGCAGATCCTGCAGACAGGAATCCCCACAGTAAGGCATTGTCTCTGTTTTTGGCCTaGAGTTGTTCCACAGTTTCT | + |
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Preference number: 2 (lower is better) Translates to: DFMNAADPADRNPHSKALSLFLA*SCSTVS Trigger: AGAAACTGTGGAACAACTCCAGGCCAAAAACAGAGA...CAATGCCTTACTGTGGGGATTCCTGTCTGCAGGATCTGCTGCATTCATAAAGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156680.2 |
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| 3UTR-3UTR TCA 90 bp | GTTTTTGGCCTGGAGTTGTTCCACAGTTTCTTTGTGCGCTTTTTCCATACTGTTTCCCCCACTATCTGCTaGCTGATTTATAGAGCTACT | + |
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Preference number: 2 (lower is better) Translates to: VFGLELFHSFFVRFFHTVSPTIC*LIYRAT Trigger: AGTAGCTCTATAAATCAGTCAGCAGATAGTGGGGGA...AACAGTATGGAAAAAGCGCACAAAGAAACTGTGGAACAACTCCAGGCCAAAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000156680.2 |
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| 3UTR-3UTR GCA 90 bp | CACACCATAGTACCTCTGGACAGGTCCACGTTTAAAGAGTATCAATTCATTAGATTGCATTTTACACAGTaGACCTGTGCACTCCACACC | + |
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Preference number: 2 (lower is better) Translates to: HTIVPLDRSTFKEYQFIRLHFTQ*TCALHT Trigger: GGTGTGGAGTGCACAGGTGCACTGTGTAAAATGCAA...TCTAATGAATTGATACTCTTTAAACGTGGACCTGTCCAGAGGTACTATGGTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059579.12 ENSMUST00000156680.2 |
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| 3UTR-3UTR GCA 90 bp | GACTTTATGAATGCAGCAGATCCTGCAGACAGGAATCCCCACAGTAAGGCATTGTCCATTATTGCATGTTaGATTTTACACAGTGCACCT | + |
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Preference number: 2 (lower is better) Translates to: DFMNAADPADRNPHSKALSIIAC*ILHSAP Trigger: AGGTGCACTGTGTAAAATGCAACATGCAATAATGGA...CAATGCCTTACTGTGGGGATTCCTGTCTGCAGGATCTGCTGCATTCATAAAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059579.12 ENSMUST00000156680.2 |
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| 3UTR-3UTR GCA 90 bp | CACACCATAGTACCTCTGGACAGGTCCACGTTTAAAGAGTATCAATTCATTAGATCGGATGCTGTACAGTaGACATCAATCCTAGAGCAG | + |
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Preference number: 2 (lower is better) Translates to: HTIVPLDRSTFKEYQFIRSDAVQ*TSILEQ Trigger: CTGCTCTAGGATTGATGTGCACTGTACAGCATCCGA...TCTAATGAATTGATACTCTTTAAACGTGGACCTGTCCAGAGGTACTATGGTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059579.12 ENSMUST00000156680.2 |
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| 3UTR-3UTR GCA 90 bp | ATGAATGCAGCAGATCCTGCAGACAGGAATCCCCACAGTAAGGCATTGTCTACCGAAAACAAGTGTAACTaGACATTCCTAAGAGAAAGA | + |
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Preference number: 2 (lower is better) Translates to: MNAADPADRNPHSKALSTENKCN*TFLRER Trigger: TCTTTCTCTTAGGAATGTGCAGTTACACTTGTTTTC...GGTAGACAATGCCTTACTGTGGGGATTCCTGTCTGCAGGATCTGCTGCATTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059579.12 ENSMUST00000156680.2 |
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| 3UTR-3UTR CCA 90 bp | GACTTTATGAATGCAGCAGATCCTGCAGACAGGAATCCCCACAGTAAGGCATTGCTGTGGATTGAAAACTaGCCAAGAAACTGTAATCAA | + |
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Preference number: 2 (lower is better) Translates to: DFMNAADPADRNPHSKALLWIEN*PRNCNQ Trigger: TTGATTACAGTTTCTTGGCCAGTTTTCAATCCACAG...CAATGCCTTACTGTGGGGATTCCTGTCTGCAGGATCTGCTGCATTCATAAAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059579.12 ENSMUST00000156680.2 |
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| 3UTR-3UTR GCA 90 bp | AATAAGGACTTTATGAATGCAGCAGATCCTGCAGACAGGAATCCCCACAGTAAGTCCACAGTTTCTTTGTaGGCTTTTTCCATACTGTTC | + |
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Preference number: 2 (lower is better) Translates to: NKDFMNAADPADRNPHSKSTVSL*AFSILF Trigger: GAACAGTATGGAAAAAGCGCACAAAGAAACTGTGGA...CTTACTGTGGGGATTCCTGTCTGCAGGATCTGCTGCATTCATAAAGTCCTTATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156680.2 |
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| 3UTR-3UTR GCA 90 bp | TTACTGGTTTTGATAATTATCAACATACAGCCAATATTGCTTCTTCCATGCCTCCGATTCCTCGGCTTCTaGCTTCTCAGGGCTGGAATT | + |
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Preference number: 2 (lower is better) Translates to: LLVLIIINIQPILLLPCLRFLGF*LLRAGI Trigger: AATTCCAGCCCTGAGAAGGCAGAAGCCGAGGAATCG...GAGGCATGGAAGAAGCAATATTGGCTGTATGTTGATAATTATCAAAACCAGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213416.2 |
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| 3UTR-3UTR TCA 90 bp | ACGTTTAAAGAGTATCAATTCATTAGATCAATACACTACAGATCTGGGACTGAGAGGACAGCACACAGCTaGCTCTTACCAAAGCTGACT | + |
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Preference number: 2 (lower is better) Translates to: TFKEYQFIRSIHYRSGTERTAHS*LLPKLT Trigger: AGTCAGCTTTGGTAAGAGTCAGCTGTGTGCTGTCCT...CTCAGTCCCAGATCTGTAGTGTATTGATCTAATGAATTGATACTCTTTAAACGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059579.12 ENSMUST00000156680.2 |
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| 3UTR-3UTR GCA 90 bp | CTGGACAGGTCCACGTTTAAAGAGTATCAATTCATTAGATCAATACACTACAGATCGGATGCTGTACAGTaGACATCAATCCTAGAGCAG | + |
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Preference number: 2 (lower is better) Translates to: LDRSTFKEYQFIRSIHYRSDAVQ*TSILEQ Trigger: CTGCTCTAGGATTGATGTGCACTGTACAGCATCCGA...TCTGTAGTGTATTGATCTAATGAATTGATACTCTTTAAACGTGGACCTGTCCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059579.12 ENSMUST00000156680.2 |
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| 3UTR-3UTR TCA 90 bp | ACATGTGACCAGCTTAACAGGCTCATCGGAAAATGCATATTTAGACCAATATACTCACTCCAAGCCAGCTaGAGTTTTATCTGCATGTTT | + |
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Preference number: 2 (lower is better) Translates to: TCDQLNRLIGKCIFRPIYSLQAS*SFICMF Trigger: AAACATGCAGATAAAACTTCAGCTGGCTTGGAGTGA...GTATATTGGTCTAAATATGCATTTTCCGATGAGCCTGTTAAGCTGGTCACATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059579.12 ENSMUST00000156680.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGACAGGTCCACGTTTAAAGAGTATCAATTCATTAGATCAATACACTACAGAAGGCTGCAACCTGTTTaGGTAGTTCTCTGTTTTTGG | + |
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Preference number: 2 (lower is better) Translates to: LDRSTFKEYQFIRSIHYRRLQPV*VVLCFW Trigger: CCAAAAACAGAGAACTACTCAAACAGGTTGCAGCCT...TCTGTAGTGTATTGATCTAATGAATTGATACTCTTTAAACGTGGACCTGTCCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156680.2 |
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| 3UTR-3UTR GCA 90 bp | GTTTTTGGCCTGGAGTTGTTCCACAGTTTCTTTGTGCGCTTTTTCCATACTGTTACTGACAGAAATGGATaGAACTGGCAAATTACCTTA | + |
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Preference number: 2 (lower is better) Translates to: VFGLELFHSFFVRFFHTVTDRNG*NWQITL Trigger: TAAGGTAATTTGCCAGTTGCATCCATTTCTGTCAGT...AACAGTATGGAAAAAGCGCACAAAGAAACTGTGGAACAACTCCAGGCCAAAAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000156680.2 |
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| 3UTR-3UTR GCA 90 bp | AGGACTGATGAAAACAAGTGTAACTGCACATTCCTAAGAGAAAGAAGTCATATGACGTTTTACCTCGGATaGTGTACAGTGCACATCAAT | + |
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Preference number: 2 (lower is better) Translates to: RTDENKCNCTFLRERSHMTFYLG*CTVHIN Trigger: ATTGATGTGCACTGTACAGCATCCGAGGTAAAACGT...CATATGACTTCTTTCTCTTAGGAATGTGCAGTTACACTTGTTTTCATCAGTCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059579.12 ENSMUST00000156680.2 |
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| 3UTR-3UTR GCA 90 bp | CACACCATAGTACCTCTGGACAGGTCCACGTTTAAAGAGTATCAATTCATTAGAATAGTCTGGTCTCTTTaGTGTAAGAGACGTTTAAGT | + |
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Preference number: 2 (lower is better) Translates to: HTIVPLDRSTFKEYQFIRIVWSL*CKRRLS Trigger: ACTTAAACGTCTCTTACAGCAAAGAGACCAGACTAT...TCTAATGAATTGATACTCTTTAAACGTGGACCTGTCCAGAGGTACTATGGTGTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156680.2 |
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| 3UTR-3UTR CCA 90 bp | ACGTTTAAAGAGTATCAATTCATTAGATCAATACACTACAGATCTGGGACTGAGCATTGTCTACCAAAGTaGAAAACAGTGAGCGAGCGA | + |
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Preference number: 2 (lower is better) Translates to: TFKEYQFIRSIHYRSGTEHCLPK*KTVSER Trigger: TCGCTCGCTCACTGTTTTCCACTTTGGTAGACAATG...CTCAGTCCCAGATCTGTAGTGTATTGATCTAATGAATTGATACTCTTTAAACGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059579.12 ENSMUST00000156680.2 |
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| 3UTR CAA 90 bp | ATATGGCTATTACTGGTTTTGATAATTATCAACATACAGCCAATATaGCTTCTTCCATGCCTCGATCCCTCTCTCCCTTATTATGAAGCA | + |
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Preference number: 2 (lower is better) Translates to: IWLLLVLIIINIQPI*LLPCLDPSLPYYEA Trigger: TGCTTCATAATAAGGGAGAGAGGGATCGAGGCATGGAAGAAGCAATATTGGCTGTATGTTGATAATTATCAAAACCAGTAATAGCCATAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213416.2 |
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| 3UTR-3UTR GCA 90 bp | CTGGACAGGTCCACGTTTAAAGAGTATCAATTCATTAGATCAATACACTACAGACAGCCACTCCATTATTaGATGTTGCATTTTACACAG | + |
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Preference number: 2 (lower is better) Translates to: LDRSTFKEYQFIRSIHYRQPLHY*MLHFTQ Trigger: CTGTGTAAAATGCAACATGCAATAATGGAGTGGCTG...TCTGTAGTGTATTGATCTAATGAATTGATACTCTTTAAACGTGGACCTGTCCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059579.12 ENSMUST00000156680.2 |
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| 3UTR-3UTR CCA 90 bp | CACACCATAGTACCTCTGGACAGGTCCACGTTTAAAGAGTATCAATTCATTAGAAGAAATGGATGCAACTaGCAAATTACCTTACTAATG | + |
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Preference number: 2 (lower is better) Translates to: HTIVPLDRSTFKEYQFIRRNGCN*QITLLM Trigger: CATTAGTAAGGTAATTTGCCAGTTGCATCCATTTCT...TCTAATGAATTGATACTCTTTAAACGTGGACCTGTCCAGAGGTACTATGGTGTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156680.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGACAGGTCCACGTTTAAAGAGTATCAATTCATTAGATCAATACACTACAGACTTAGTCCTCAAATTTaGCTCTTGGTATTGAAAGTC | + |
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Preference number: 2 (lower is better) Translates to: LDRSTFKEYQFIRSIHYRLSPQI*LLVLKV Trigger: GACTTTCAATACCAAGAGTCAAATTTGAGGACTAAG...TCTGTAGTGTATTGATCTAATGAATTGATACTCTTTAAACGTGGACCTGTCCAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156680.2 |
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| 3UTR-3UTR GCA 90 bp | CTGGACAGGTCCACGTTTAAAGAGTATCAATTCATTAGATCAATACACTACAGAGAAAACAAGTGTAACTaGACATTCCTAAGAGAAAGA | + |
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Preference number: 2 (lower is better) Translates to: LDRSTFKEYQFIRSIHYRENKCN*TFLRER Trigger: TCTTTCTCTTAGGAATGTGCAGTTACACTTGTTTTC...TCTGTAGTGTATTGATCTAATGAATTGATACTCTTTAAACGTGGACCTGTCCAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059579.12 ENSMUST00000156680.2 |
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| 3UTR GCA 72 bp | CCACCCCTGCTGCTGCTCTGCCAGCCACTCCATTATTaGATGTTGCATTTTACACAGTGCACCTGTGCACTC | + |
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Preference number: 3 (lower is better) Translates to: PPLLLLCQPLHY*MLHFTQCTCAL Trigger: GAGTGCACAGGTGCACTGTGTAAAATGCAACATGCAATAATGGAGTGGCTGGCAGAGCAGCAGCAGGGGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059579.12 ENSMUST00000156680.2 |
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| 3UTR GCA 72 bp | TGCTGCTGCTCTGCCAGCCACTCCATTATTGCATGTTaGATTTTACACAGTGCACCTGTGCACTCCACACCA | + |
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Preference number: 3 (lower is better) Translates to: CCCSASHSIIAC*ILHSAPVHSTP Trigger: TGGTGTGGAGTGCACAGGTGCACTGTGTAAAATGCAACATGCAATAATGGAGTGGCTGGCAGAGCAGCAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059579.12 ENSMUST00000156680.2 |
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| 3UTR-3UTR CAA 90 bp | ATGAATGCAGCAGATCCTGCAGACAGGAATCCCCACAGTAAGGCATTGTCTACCCTCAAGTACACACTGTaGGGCAGAAATGCTAAACAA | + |
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Preference number: 3 (lower is better) Translates to: MNAADPADRNPHSKALSTLKYTL*GRNAKQ Trigger: TTGTTTAGCATTTCTGCCCAACAGTGTGTACTTGAG...GGTAGACAATGCCTTACTGTGGGGATTCCTGTCTGCAGGATCTGCTGCATTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059579.12 ENSMUST00000156680.2 |
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| 3UTR-3UTR CAA 90 bp | ATGAATGCAGCAGATCCTGCAGACAGGAATCCCCACAGTAAGGCATTGTCTACCCTCCATTATTGCATGTaGCATTTTACACAGTGCACC | + |
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Preference number: 3 (lower is better) Translates to: MNAADPADRNPHSKALSTLHYCM*HFTQCT Trigger: GGTGCACTGTGTAAAATGCAACATGCAATAATGGAG...GGTAGACAATGCCTTACTGTGGGGATTCCTGTCTGCAGGATCTGCTGCATTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059579.12 ENSMUST00000156680.2 |
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| 3UTR-3UTR CAA 90 bp | ATGAATGCAGCAGATCCTGCAGACAGGAATCCCCACAGTAAGGCATTGTCTACCCCAGCCACTCCATTATaGCATGTTGCATTTTACACA | + |
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Preference number: 3 (lower is better) Translates to: MNAADPADRNPHSKALSTPATPL*HVAFYT Trigger: TGTGTAAAATGCAACATGCAATAATGGAGTGGCTGG...GGTAGACAATGCCTTACTGTGGGGATTCCTGTCTGCAGGATCTGCTGCATTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000059579.12 ENSMUST00000156680.2 |
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| 3UTR-3UTR CAA 90 bp | ATGAATGCAGCAGATCCTGCAGACAGGAATCCCCACAGTAAGGCATTGTCTACCAAGGCTGCAACCTGTTaGAGTAGTTCTCTGTTTTTG | + |
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Preference number: 3 (lower is better) Translates to: MNAADPADRNPHSKALSTKAATC*SSSLFL Trigger: CAAAAACAGAGAACTACTCAAACAGGTTGCAGCCTT...GGTAGACAATGCCTTACTGTGGGGATTCCTGTCTGCAGGATCTGCTGCATTCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156680.2 |
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| 3UTR-3UTR CAA 90 bp | ATGAATGCAGCAGATCCTGCAGACAGGAATCCCCACAGTAAGGCATTGTCTACCAGCACGCTTCCACTCTaGTCAAACTTTTTACCCTTA | + |
|
Preference number: 3 (lower is better) Translates to: MNAADPADRNPHSKALSTSTLPL*SNFLPL Trigger: TAAGGGTAAAAAGTTTGACAAGAGTGGAAGCGTGCT...GGTAGACAATGCCTTACTGTGGGGATTCCTGTCTGCAGGATCTGCTGCATTCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156680.2 |
||
| 3UTR-3UTR CAA 90 bp | GACAGGAATCCCCACAGTAAGGCATTGTCTACCAAAGTGGAAAACAGTGAGCGACTCAAGTACACACTGTaGGGCAGAAATGCTAAACAA | + |
|
Preference number: 3 (lower is better) Translates to: DRNPHSKALSTKVENSERLKYTL*GRNAKQ Trigger: TTGTTTAGCATTTCTGCCCAACAGTGTGTACTTGAG...TCGCTCACTGTTTTCCACTTTGGTAGACAATGCCTTACTGTGGGGATTCCTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059579.12 ENSMUST00000156680.2 |
||
| 3UTR-3UTR CAA 90 bp | GACAGGAATCCCCACAGTAAGGCATTGTCTACCAAAGTGGAAAACAGTGAGCGACTGATAAGGACAAAATaGTCTGTTCCCCCACTATCT | + |
|
Preference number: 3 (lower is better) Translates to: DRNPHSKALSTKVENSERLIRTK*SVPPLS Trigger: AGATAGTGGGGGAACAGACAATTTTGTCCTTATCAG...TCGCTCACTGTTTTCCACTTTGGTAGACAATGCCTTACTGTGGGGATTCCTGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000156680.2 |
||
| 3UTR CCA 72 bp | AACTGCACATTCCTAAGAGAAAGAAGTCATATGGTGTaGCCAGCAGTGCCTGAAGGTTTAGAATTCACCTTG | + |
|
Preference number: 3 (lower is better) Translates to: NCTFLRERSHMV*PAVPEGLEFTL Trigger: CAAGGTGAATTCTAAACCTTCAGGCACTGCTGGCCACACCATATGACTTCTTTCTCTTAGGAATGTGCAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059579.12 ENSMUST00000156680.2 |
||
| 3UTR CCA 72 bp | AGGACTCTTCTTTCCCTTTTCTCTCATATCCAATGCTaGTCTCACACTCACTGTGCAGGTGATAATGACCTT | + |
|
Preference number: 3 (lower is better) Translates to: RTLLSLFSHIQC*SHTHCAGDNDL Trigger: AAGGTCATTATCACCTGCACAGTGAGTGTGAGACCAGCATTGGATATGAGAGAAAAGGGAAAGAAGAGTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213416.2 |
||
| 3UTR-3UTR CAA 90 bp | AATAAGGACTTTATGAATGCAGCAGATCCTGCAGACAGGAATCCCCACAGTAAGCTCCATTATTGCATGTaGCATTTTACACAGTGCACC | + |
|
Preference number: 3 (lower is better) Translates to: NKDFMNAADPADRNPHSKLHYCM*HFTQCT Trigger: GGTGCACTGTGTAAAATGCAACATGCAATAATGGAG...CTTACTGTGGGGATTCCTGTCTGCAGGATCTGCTGCATTCATAAAGTCCTTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059579.12 ENSMUST00000156680.2 |
||
| 3UTR-3UTR CAA 90 bp | CACACCATAGTACCTCTGGACAGGTCCACGTTTAAAGAGTATCAATTCATTAGAAGTAGTTCTCTGTTTTaGGCCTGGAGTTGTTCCACA | + |
|
Preference number: 3 (lower is better) Translates to: HTIVPLDRSTFKEYQFIRSSSLF*AWSCST Trigger: TGTGGAACAACTCCAGGCCAAAAACAGAGAACTACT...TCTAATGAATTGATACTCTTTAAACGTGGACCTGTCCAGAGGTACTATGGTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156680.2 |
||
| 3UTR TCA 72 bp | AGGACAAAATTGTCTGTTCCCCCACTATCTGCTGACTaGTTTATAGAGCTACTGACAGAAATGGATGCAACT | + |
|
Preference number: 3 (lower is better) Translates to: RTKLSVPPLSAD*FIELLTEMDAT Trigger: AGTTGCATCCATTTCTGTCAGTAGCTCTATAAATCAGTCAGCAGATAGTGGGGGAACAGACAATTTTGTCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156680.2 |
||
| 3UTR TCA 72 bp | GATAAGGACAAAATTGTCTGTTCCCCCACTATCTGCTaGCTGATTTATAGAGCTACTGACAGAAATGGATGC | + |
|
Preference number: 3 (lower is better) Translates to: DKDKIVCSPTIC*LIYRATDRNGC Trigger: GCATCCATTTCTGTCAGTAGCTCTATAAATCAGTCAGCAGATAGTGGGGGAACAGACAATTTTGTCCTTATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156680.2 |
||
| 3UTR TCA 72 bp | AGAATTCACCTTGAAGCCAGAACTAACATCAGAAGCTaGTCTGTAATTTCTCAGAATCTATCCCACACTATG | + |
|
Preference number: 3 (lower is better) Translates to: RIHLEARTNIRS*SVISQNLSHTM Trigger: CATAGTGTGGGATAGATTCTGAGAAATTACAGATCAGCTTCTGATGTTAGTTCTGGCTTCAAGGTGAATTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059579.12 ENSMUST00000156680.2 |
||
| 3UTR TCA 72 bp | CGCTTTTTCCATACTGTTCATCTTAGTCCTCAAATTTaGCTCTTGGTATTGAAAGTCTGCCTTCAGTTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: RFFHTVHLSPQI*LLVLKVCLQFS Trigger: ACTGAACTGAAGGCAGACTTTCAATACCAAGAGTCAAATTTGAGGACTAAGATGAACAGTATGGAAAAAGCG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156680.2 |
||
| 3UTR-3UTR CAA 90 bp | ACGTTTAAAGAGTATCAATTCATTAGATCAATACACTACAGATCTGGGACTGAGTATGACTACTGTGGATaGAAAACTGGCCAAGAAACT | + |
|
Preference number: 3 (lower is better) Translates to: TFKEYQFIRSIHYRSGTEYDYCG*KTGQET Trigger: AGTTTCTTGGCCAGTTTTCAATCCACAGTAGTCATA...CTCAGTCCCAGATCTGTAGTGTATTGATCTAATGAATTGATACTCTTTAAACGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059579.12 ENSMUST00000156680.2 |
||
| 3UTR TCA 72 bp | CTGTTCATCTTAGTCCTCAAATTTGACTCTTGGTATTaGAAGTCTGCCTTCAGTTCAGTTAACTTTTTATCT | + |
|
Preference number: 3 (lower is better) Translates to: LFILVLKFDSWY*KSAFSSVNFLS Trigger: AGATAAAAAGTTAACTGAACTGAAGGCAGACTTTCAATACCAAGAGTCAAATTTGAGGACTAAGATGAACAG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156680.2 |
||
| CDS-3UTR GCA 90 bp | GAATCTAAGGGTGTCACAGGACACCTCAAGTACACACTGTTGGGCAGAAATGCTCAGAGCTGTTGGCCCTaGGAGAGCTCCTCGAAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: ESKGVTGHLKYTLLGRNAQSCWP*ESSSKG Trigger: CCCCTTCGAGGAGCTCTCGCAGGGCCAACAGCTCTG...AGCATTTCTGCCCAACAGTGTGTACTTGAGGTGTCCTGTGACACCCTTAGATTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059579.12 ENSMUST00000156680.2 |
||
| 3UTR CAA 72 bp | CCCACCCCTGCTGCTGCTCTGCCAGCCACTCCATTATaGCATGTTGCATTTTACACAGTGCACCTGTGCACT | + |
|
Preference number: 4 (lower is better) Translates to: PTPAAALPATPL*HVAFYTVHLCT Trigger: AGTGCACAGGTGCACTGTGTAAAATGCAACATGCAATAATGGAGTGGCTGGCAGAGCAGCAGCAGGGGTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059579.12 ENSMUST00000156680.2 |
||
| CDS-3UTR CCA 90 bp | GAATCTAAGGGTGTCACAGGACACCTCAAGTACACACTGTTGGGCAGAAATGCTTCCTTGCAGAGCTGTTaGCCCTGCGAGAGCTCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: ESKGVTGHLKYTLLGRNASLQSC*PCESSS Trigger: CGAGGAGCTCTCGCAGGGCCAACAGCTCTGCAAGGA...AGCATTTCTGCCCAACAGTGTGTACTTGAGGTGTCCTGTGACACCCTTAGATTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059579.12 ENSMUST00000156680.2 |
||
| CDS-3UTR CCA 90 bp | GACTTTATGAATGCAGCAGATCCTGCAGACAGGAATCCCCACAGTAAGGCATTGTCCTTGCAGAGCTGTTaGCCCTGCGAGAGCTCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: DFMNAADPADRNPHSKALSLQSC*PCESSS Trigger: CGAGGAGCTCTCGCAGGGCCAACAGCTCTGCAAGGA...CAATGCCTTACTGTGGGGATTCCTGTCTGCAGGATCTGCTGCATTCATAAAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059579.12 ENSMUST00000156680.2 |
||
| 3UTR CAA 72 bp | CTGCTGCTGCTCTGCCAGCCACTCCATTATTGCATGTaGCATTTTACACAGTGCACCTGTGCACTCCACACC | + |
|
Preference number: 4 (lower is better) Translates to: LLLLCQPLHYCM*HFTQCTCALHT Trigger: GGTGTGGAGTGCACAGGTGCACTGTGTAAAATGCAACATGCAATAATGGAGTGGCTGGCAGAGCAGCAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059579.12 ENSMUST00000156680.2 |
||
| CDS-3UTR GCA 90 bp | GCCCCACCCCTGCTGCTGCTCTGCCAGCCACTCCATTATTGCATGTTGCATTTTTCTTGTATGACAAGGTaGAGAGCCAGCACAGCAACT | + |
|
Preference number: 4 (lower is better) Translates to: APPLLLLCQPLHYCMLHFSCMTR*RASTAT Trigger: AGTTGCTGTGCTGGCTCTGCACCTTGTCATACAAGA...AAAATGCAACATGCAATAATGGAGTGGCTGGCAGAGCAGCAGCAGGGGTGGGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000059579.12 ENSMUST00000156680.2 |
||
| CDS-3UTR GCA 90 bp | ATGAATGCAGCAGATCCTGCAGACAGGAATCCCCACAGTAAGGCATTGTCTACCCACAGTCCCTGCTCCTaGTCAGGACTTAGACTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: MNAADPADRNPHSKALSTHSPCS*SGLRLL Trigger: CAGCAGTCTAAGTCCTGAGCAGGAGCAGGGACTGTG...GGTAGACAATGCCTTACTGTGGGGATTCCTGTCTGCAGGATCTGCTGCATTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059579.12 ENSMUST00000156680.2 |
||
| CDS-3UTR GCA 90 bp | TGCACAGAATCTAAGGGTGTCACAGGACACCTCAAGTACACACTGTTGGGCAGACACAGTCCCTGCTCCTaGTCAGGACTTAGACTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: CTESKGVTGHLKYTLLGRHSPCS*SGLRLL Trigger: CAGCAGTCTAAGTCCTGAGCAGGAGCAGGGACTGTG...TCTGCCCAACAGTGTGTACTTGAGGTGTCCTGTGACACCCTTAGATTCTGTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059579.12 ENSMUST00000156680.2 |
||
| CDS-3UTR CCA 90 bp | GAATCTAAGGGTGTCACAGGACACCTCAAGTACACACTGTTGGGCAGAAATGCTAGACTGCTGACTTTGTaGTGGCCACTGCTGTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: ESKGVTGHLKYTLLGRNARLLTL*WPLLWR Trigger: CCGCCACAGCAGTGGCCACCACAAAGTCAGCAGTCT...AGCATTTCTGCCCAACAGTGTGTACTTGAGGTGTCCTGTGACACCCTTAGATTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059579.12 ENSMUST00000156680.2 |
||
| CDS-3UTR TCA 90 bp | GAATCTAAGGGTGTCACAGGACACCTCAAGTACACACTGTTGGGCAGAAATGCTCAGGACTTAGACTGCTaGCTTTGTGGTGGCCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: ESKGVTGHLKYTLLGRNAQDLDC*LCGGHC Trigger: GCAGTGGCCACCACAAAGTCAGCAGTCTAAGTCCTG...AGCATTTCTGCCCAACAGTGTGTACTTGAGGTGTCCTGTGACACCCTTAGATTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059579.12 ENSMUST00000156680.2 |
||
| CDS-3UTR CCA 90 bp | GCCCCACCCCTGCTGCTGCTCTGCCAGCCACTCCATTATTGCATGTTGCATTTTTGGTGGTGTTTAGAATaGTGCTGGTCTTTCTCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: APPLLLLCQPLHYCMLHFWWCLE*CWSFSV Trigger: TACTGAGAAAGACCAGCACCATTCTAAACACCACCA...AAAATGCAACATGCAATAATGGAGTGGCTGGCAGAGCAGCAGCAGGGGTGGGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000059579.12 ENSMUST00000156680.2 |
||
| CDS-3UTR GCA 90 bp | GGTATCAAAGAATTAAGAAGTCACTCCAAGCCAGCTGAAGTTTTATCTGCATGTCAGAGCTGTTGGCCCTaGGAGAGCTCCTCGAAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GIKELRSHSKPAEVLSACQSCWP*ESSSKG Trigger: CCCCTTCGAGGAGCTCTCGCAGGGCCAACAGCTCTG...ACATGCAGATAAAACTTCAGCTGGCTTGGAGTGACTTCTTAATTCTTTGATACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059579.12 ENSMUST00000156680.2 |
||
| CDS-3UTR GCA 90 bp | GAATCTAAGGGTGTCACAGGACACCTCAAGTACACACTGTTGGGCAGAAATGCTTGTTTCCACAGTCCCTaGTCCTGCTCAGGACTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: ESKGVTGHLKYTLLGRNACFHSP*SCSGLR Trigger: TCTAAGTCCTGAGCAGGAGCAGGGACTGTGGAAACA...AGCATTTCTGCCCAACAGTGTGTACTTGAGGTGTCCTGTGACACCCTTAGATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059579.12 ENSMUST00000156680.2 |
||
| CDS-3UTR TCA 90 bp | GCCCCACCCCTGCTGCTGCTCTGCCAGCCACTCCATTATTGCATGTTGCATTTTTTTGGAGTTTCATTCTaGATTGCTGCAGAGGATTTA | + |
|
Preference number: 4 (lower is better) Translates to: APPLLLLCQPLHYCMLHFFGVSF*IAAEDL Trigger: TAAATCCTCTGCAGCAATTCAGAATGAAACTCCAAA...AAAATGCAACATGCAATAATGGAGTGGCTGGCAGAGCAGCAGCAGGGGTGGGGC 48% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000059579.12 ENSMUST00000156680.2 |
||
| CDS-3UTR TCA 90 bp | ATGAATGCAGCAGATCCTGCAGACAGGAATCCCCACAGTAAGGCATTGTCTACCTCCCCCACTATCTGCTaGCTGATTTATAGAGCTACT | + |
|
Preference number: 4 (lower is better) Translates to: MNAADPADRNPHSKALSTSPTIC*LIYRAT Trigger: AGTAGCTCTATAAATCAGTCAGCAGATAGTGGGGGA...GGTAGACAATGCCTTACTGTGGGGATTCCTGTCTGCAGGATCTGCTGCATTCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059579.12 |
||
| CDS-3UTR TCA 90 bp | GAGCTTCCGATTCCTCGGCTTCTGCCTTCTCAGGGCTGGAATTACAGGTGTGCACTTAGTCCTCAAATTTaGCTCTTGGTATTGAAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: ELPIPRLLPSQGWNYRCALSPQI*LLVLKV Trigger: GACTTTCAATACCAAGAGTCAAATTTGAGGACTAAG...TGCACACCTGTAATTCCAGCCCTGAGAAGGCAGAAGCCGAGGAATCGGAAGCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213416.2 |
||
| CDS-3UTR TCA 90 bp | ATGAATGCAGCAGATCCTGCAGACAGGAATCCCCACAGTAAGGCATTGTCTACCAGGCTGCAACCTGTTTaGGTAGTTCTCTGTTTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: MNAADPADRNPHSKALSTRLQPV*VVLCFW Trigger: CCAAAAACAGAGAACTACTCAAACAGGTTGCAGCCT...GGTAGACAATGCCTTACTGTGGGGATTCCTGTCTGCAGGATCTGCTGCATTCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059579.12 |
||
| CDS-3UTR GCA 90 bp | GACAGGAATCCCCACAGTAAGGCATTGTCTACCAAAGTGGAAAACAGTGAGCGACGATCAAAAGCACACTaGTGTTTGCACTGCTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: DRNPHSKALSTKVENSERRSKAH*CLHCSQ Trigger: CTGTGAGCAGTGCAAACAGCAGTGTGCTTTTGATCG...TCGCTCACTGTTTTCCACTTTGGTAGACAATGCCTTACTGTGGGGATTCCTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000059579.12 ENSMUST00000156680.2 |
||
| CDS-3UTR GCA 90 bp | TGCACAGAATCTAAGGGTGTCACAGGACACCTCAAGTACACACTGTTGGGCAGATTCTTCCTTCCTCCTTaGGATCAAAAGCACACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: CTESKGVTGHLKYTLLGRFFLPP*DQKHTA Trigger: AGCAGTGTGCTTTTGATCGCAAGGAGGAAGGAAGAA...TCTGCCCAACAGTGTGTACTTGAGGTGTCCTGTGACACCCTTAGATTCTGTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059579.12 ENSMUST00000156680.2 |
||
| CDS-3UTR CCA 90 bp | CTGGACAGGTCCACGTTTAAAGAGTATCAATTCATTAGATCAATACACTACAGAAGCGCTGCGTGCACTTaGTGCAGGCGTACAAGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: LDRSTFKEYQFIRSIHYRSAACT*CRRTRP Trigger: CGGCCTTGTACGCCTGCACCAAGTGCACGCAGCGCT...TCTGTAGTGTATTGATCTAATGAATTGATACTCTTTAAACGTGGACCTGTCCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059579.12 ENSMUST00000156680.2 |
||
| CDS-3UTR CCA 90 bp | CACACCATAGTACCTCTGGACAGGTCCACGTTTAAAGAGTATCAATTCATTAGAAGACTGCTGACTTTGTaGTGGCCACTGCTGTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: HTIVPLDRSTFKEYQFIRRLLTL*WPLLWR Trigger: CCGCCACAGCAGTGGCCACCACAAAGTCAGCAGTCT...TCTAATGAATTGATACTCTTTAAACGTGGACCTGTCCAGAGGTACTATGGTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059579.12 ENSMUST00000156680.2 |
||
| CDS-3UTR TCA 90 bp | ATCCAATGCTGGTCTCACACTCACTGTGCAGGTGATAATGACCTTGAGCTTCCGTTTGACTCTTGGTATTaGAAGTCTGCCTTCAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: IQCWSHTHCAGDNDLELPFDSWY*KSAFSS Trigger: TGAACTGAAGGCAGACTTTCAATACCAAGAGTCAAA...CGGAAGCTCAAGGTCATTATCACCTGCACAGTGAGTGTGAGACCAGCATTGGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213416.2 |
||
| CDS-3UTR GCA 90 bp | ACATGTGACCAGCTTAACAGGCTCATCGGAAAATGCATATTTAGACCAATATACCAATCCGACATTCCTTaGAGAGCTGTTGGCCCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: TCDQLNRLIGKCIFRPIYQSDIP*RAVGPA Trigger: CGCAGGGCCAACAGCTCTGCAAGGAATGTCGGATTG...GTATATTGGTCTAAATATGCATTTTCCGATGAGCCTGTTAAGCTGGTCACATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059579.12 ENSMUST00000156680.2 |
||
| CDS-3UTR CCA 90 bp | GAATCTAAGGGTGTCACAGGACACCTCAAGTACACACTGTTGGGCAGAAATGCTTGGTGGTGTTTAGAATaGTGCTGGTCTTTCTCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: ESKGVTGHLKYTLLGRNAWWCLE*CWSFSV Trigger: TACTGAGAAAGACCAGCACCATTCTAAACACCACCA...AGCATTTCTGCCCAACAGTGTGTACTTGAGGTGTCCTGTGACACCCTTAGATTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059579.12 ENSMUST00000156680.2 |
||
| CDS-3UTR CCA 90 bp | GAATCTAAGGGTGTCACAGGACACCTCAAGTACACACTGTTGGGCAGAAATGCTTCTCTGTTTTTGGCCTaGAGTTGTTCCACAGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ESKGVTGHLKYTLLGRNASLFLA*SCSTVS Trigger: AGAAACTGTGGAACAACTCCAGGCCAAAAACAGAGA...AGCATTTCTGCCCAACAGTGTGTACTTGAGGTGTCCTGTGACACCCTTAGATTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059579.12 |
||
| CDS-3UTR CCA 90 bp | GACTTTATGAATGCAGCAGATCCTGCAGACAGGAATCCCCACAGTAAGGCATTGCCTATCTCCATTAGATaGCTTAGATTCCAACTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: DFMNAADPADRNPHSKALPISIR*LRFQLG Trigger: CCCAAGTTGGAATCTAAGCCATCTAATGGAGATAGG...CAATGCCTTACTGTGGGGATTCCTGTCTGCAGGATCTGCTGCATTCATAAAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156680.2 |
||
| CDS-3UTR TCA 90 bp | ATGAATGCAGCAGATCCTGCAGACAGGAATCCCCACAGTAAGGCATTGTCTACCCTTAGTCCTCAAATTTaGCTCTTGGTATTGAAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: MNAADPADRNPHSKALSTLSPQI*LLVLKV Trigger: GACTTTCAATACCAAGAGTCAAATTTGAGGACTAAG...GGTAGACAATGCCTTACTGTGGGGATTCCTGTCTGCAGGATCTGCTGCATTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059579.12 |
||
| CDS-3UTR GCA 90 bp | CTGGACAGGTCCACGTTTAAAGAGTATCAATTCATTAGATCAATACACTACAGACAATCCGACATTCCTTaGAGAGCTGTTGGCCCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: LDRSTFKEYQFIRSIHYRQSDIP*RAVGPA Trigger: CGCAGGGCCAACAGCTCTGCAAGGAATGTCGGATTG...TCTGTAGTGTATTGATCTAATGAATTGATACTCTTTAAACGTGGACCTGTCCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059579.12 ENSMUST00000156680.2 |
||
| CDS-3UTR GCA 90 bp | GAATCTAAGGGTGTCACAGGACACCTCAAGTACACACTGTTGGGCAGAAATGCTTCCACAGTTTCTTTGTaGGCTTTTTCCATACTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: ESKGVTGHLKYTLLGRNASTVSL*AFSILF Trigger: GAACAGTATGGAAAAAGCGCACAAAGAAACTGTGGA...AGCATTTCTGCCCAACAGTGTGTACTTGAGGTGTCCTGTGACACCCTTAGATTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059579.12 |
||
| CDS-3UTR TCA 90 bp | GAATCTAAGGGTGTCACAGGACACCTCAAGTACACACTGTTGGGCAGAAATGCTTTTGGAGTTTCATTCTaGATTGCTGCAGAGGATTTA | + |
|
Preference number: 4 (lower is better) Translates to: ESKGVTGHLKYTLLGRNAFGVSF*IAAEDL Trigger: TAAATCCTCTGCAGCAATTCAGAATGAAACTCCAAA...AGCATTTCTGCCCAACAGTGTGTACTTGAGGTGTCCTGTGACACCCTTAGATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059579.12 ENSMUST00000156680.2 |
||
| CDS-3UTR GCA 90 bp | ACATGTGACCAGCTTAACAGGCTCATCGGAAAATGCATATTTAGACCAATATACAAGCACACTGCTGTTTaGACTGCTCACAGGTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: TCDQLNRLIGKCIFRPIYKHTAV*TAHRSE Trigger: CTCAGACCTGTGAGCAGTGCAAACAGCAGTGTGCTT...GTATATTGGTCTAAATATGCATTTTCCGATGAGCCTGTTAAGCTGGTCACATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059579.12 ENSMUST00000156680.2 |
||
| CDS-3UTR GCA 90 bp | GTTTTTGGCCTGGAGTTGTTCCACAGTTTCTTTGTGCGCTTTTTCCATACTGTTTTCTTCCTTCCTCCTTaGGATCAAAAGCACACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VFGLELFHSFFVRFFHTVFFLPP*DQKHTA Trigger: AGCAGTGTGCTTTTGATCGCAAGGAGGAAGGAAGAA...AACAGTATGGAAAAAGCGCACAAAGAAACTGTGGAACAACTCCAGGCCAAAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000156680.2 |
||
| CDS-3UTR GCA 90 bp | ACATGTGACCAGCTTAACAGGCTCATCGGAAAATGCATATTTAGACCAATATACTGTTTCCACAGTCCCTaGTCCTGCTCAGGACTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: TCDQLNRLIGKCIFRPIYCFHSP*SCSGLR Trigger: TCTAAGTCCTGAGCAGGAGCAGGGACTGTGGAAACA...GTATATTGGTCTAAATATGCATTTTCCGATGAGCCTGTTAAGCTGGTCACATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059579.12 ENSMUST00000156680.2 |
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| CDS-3UTR GCA 90 bp | GACAGGAATCCCCACAGTAAGGCATTGTCTACCAAAGTGGAAAACAGTGAGCGAAGTTTCATTCTGAATTaGTGCAGAGGATTTATGGCT | + |
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Preference number: 4 (lower is better) Translates to: DRNPHSKALSTKVENSERSFILN*CRGFMA Trigger: AGCCATAAATCCTCTGCAGCAATTCAGAATGAAACT...TCGCTCACTGTTTTCCACTTTGGTAGACAATGCCTTACTGTGGGGATTCCTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059579.12 ENSMUST00000156680.2 |
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| CDS-3UTR GCA 90 bp | TCTCATATCCAATGCTGGTCTCACACTCACTGTGCAGGTGATAATGACCTTGAGATAGTCTGGTCTCTTTaGTGTAAGAGACGTTTAAGT | + |
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Preference number: 4 (lower is better) Translates to: SHIQCWSHTHCAGDNDLEIVWSL*CKRRLS Trigger: ACTTAAACGTCTCTTACAGCAAAGAGACCAGACTAT...CTCAAGGTCATTATCACCTGCACAGTGAGTGTGAGACCAGCATTGGATATGAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213416.2 |
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| CDS-3UTR TCA 90 bp | AATAAGGACTTTATGAATGCAGCAGATCCTGCAGACAGGAATCCCCACAGTAAGGAATTTGTACAACGCTaGCACTTGGTACCAATAAAT | + |
|
Preference number: 4 (lower is better) Translates to: NKDFMNAADPADRNPHSKEFVQR*HLVPIN Trigger: ATTTATTGGTACCAAGTGTCAGCGTTGTACAAATTC...CTTACTGTGGGGATTCCTGTCTGCAGGATCTGCTGCATTCATAAAGTCCTTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059579.12 ENSMUST00000156680.2 |
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| CDS-3UTR GCA 90 bp | AATAAGGACTTTATGAATGCAGCAGATCCTGCAGACAGGAATCCCCACAGTAAGAGTTTCATTCTGAATTaGTGCAGAGGATTTATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: NKDFMNAADPADRNPHSKSFILN*CRGFMA Trigger: AGCCATAAATCCTCTGCAGCAATTCAGAATGAAACT...CTTACTGTGGGGATTCCTGTCTGCAGGATCTGCTGCATTCATAAAGTCCTTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059579.12 ENSMUST00000156680.2 |
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| CDS-3UTR GCA 90 bp | ACGTTTAAAGAGTATCAATTCATTAGATCAATACACTACAGATCTGGGACTGAGCGATCAAAAGCACACTaGTGTTTGCACTGCTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: TFKEYQFIRSIHYRSGTERSKAH*CLHCSQ Trigger: CTGTGAGCAGTGCAAACAGCAGTGTGCTTTTGATCG...CTCAGTCCCAGATCTGTAGTGTATTGATCTAATGAATTGATACTCTTTAAACGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059579.12 ENSMUST00000156680.2 |
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| CDS-3UTR GCA 90 bp | ACGTTTAAAGAGTATCAATTCATTAGATCAATACACTACAGATCTGGGACTGAGTCTTGTATGACAAGGTaGAGAGCCAGCACAGCAACT | + |
|
Preference number: 4 (lower is better) Translates to: TFKEYQFIRSIHYRSGTESCMTR*RASTAT Trigger: AGTTGCTGTGCTGGCTCTGCACCTTGTCATACAAGA...CTCAGTCCCAGATCTGTAGTGTATTGATCTAATGAATTGATACTCTTTAAACGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059579.12 ENSMUST00000156680.2 |
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| CDS-3UTR CCA 90 bp | CACACCATAGTACCTCTGGACAGGTCCACGTTTAAAGAGTATCAATTCATTAGAACTATCTCCATTAGATaGCTTAGATTCCAACTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: HTIVPLDRSTFKEYQFIRTISIR*LRFQLG Trigger: CCCAAGTTGGAATCTAAGCCATCTAATGGAGATAGT...TCTAATGAATTGATACTCTTTAAACGTGGACCTGTCCAGAGGTACTATGGTGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059579.12 |
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| CDS-3UTR CCA 90 bp | AGGACTGATGAAAACAAGTGTAACTGCACATTCCTAAGAGAAAGAAGTCATATGGTAGTTCTCTGTTTTTaGCCTGGAGTTGTTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: RTDENKCNCTFLRERSHMVVLCF*PGVVPQ Trigger: CTGTGGAACAACTCCAGGCCAAAAACAGAGAACTAC...CATATGACTTCTTTCTCTTAGGAATGTGCAGTTACACTTGTTTTCATCAGTCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059579.12 |
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| CDS-3UTR CCA 90 bp | TTACTGGTTTTGATAATTATCAACATACAGCCAATATTGCTTCTTCCATGCCTCGAGAGGGATCGAACCTaGAGTTGTTCCACAGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LLVLIIINIQPILLLPCLERDRT*SCSTVS Trigger: AGAAACTGTGGAACAACTCCAGGTTCGATCCCTCTC...GAGGCATGGAAGAAGCAATATTGGCTGTATGTTGATAATTATCAAAACCAGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213416.2 |
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| 3UTR CAA 72 bp | TTACTGGTTTTGATAATTATCAACATACAGCCAATATaGCTTCTTCCATGCCTCGATCCCTCTCTCCCTTAT | + |
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Preference number: 4 (lower is better) Translates to: LLVLIIINIQPI*LLPCLDPSLPY Trigger: ATAAGGGAGAGAGGGATCGAGGCATGGAAGAAGCAATATTGGCTGTATGTTGATAATTATCAAAACCAGTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213416.2 |
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| CDS-3UTR TCA 90 bp | CTGGACAGGTCCACGTTTAAAGAGTATCAATTCATTAGATCAATACACTACAGAATTATGTTACAGTACTaGCAAGGCTTAGGTGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LDRSTFKEYQFIRSIHYRIMLQY*QGLGVP Trigger: TGGAACACCTAAGCCTTGTCAGTACTGTAACATAAT...TCTGTAGTGTATTGATCTAATGAATTGATACTCTTTAAACGTGGACCTGTCCAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059579.12 ENSMUST00000156680.2 |
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| CDS-3UTR TCA 90 bp | AGGACTGATGAAAACAAGTGTAACTGCACATTCCTAAGAGAAAGAAGTCATATGATTATGTTACAGTACTaGCAAGGCTTAGGTGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RTDENKCNCTFLRERSHMIMLQY*QGLGVP Trigger: TGGAACACCTAAGCCTTGTCAGTACTGTAACATAAT...CATATGACTTCTTTCTCTTAGGAATGTGCAGTTACACTTGTTTTCATCAGTCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059579.12 ENSMUST00000156680.2 |
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| CDS-3UTR TCA 90 bp | GGTATCAAAGAATTAAGAAGTCACTCCAAGCCAGCTGAAGTTTTATCTGCATGTGAATTTGTACAACGCTaGCACTTGGTACCAATAAAT | + |
|
Preference number: 4 (lower is better) Translates to: GIKELRSHSKPAEVLSACEFVQR*HLVPIN Trigger: ATTTATTGGTACCAAGTGTCAGCGTTGTACAAATTC...ACATGCAGATAAAACTTCAGCTGGCTTGGAGTGACTTCTTAATTCTTTGATACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059579.12 ENSMUST00000156680.2 |
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| CDS-3UTR TCA 90 bp | ACGTTTAAAGAGTATCAATTCATTAGATCAATACACTACAGATCTGGGACTGAGCCACTATCTGCTGACTaGTTTATAGAGCTACTATCT | + |
|
Preference number: 4 (lower is better) Translates to: TFKEYQFIRSIHYRSGTEPLSAD*FIELLS Trigger: AGATAGTAGCTCTATAAATCAGTCAGCAGATAGTGG...CTCAGTCCCAGATCTGTAGTGTATTGATCTAATGAATTGATACTCTTTAAACGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059579.12 |
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| CDS-3UTR TCA 90 bp | ACGTTTAAAGAGTATCAATTCATTAGATCAATACACTACAGATCTGGGACTGAGTTTGACTCTTGGTATTaGAAGTCTGCCTTCAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TFKEYQFIRSIHYRSGTEFDSWY*KSAFSS Trigger: TGAACTGAAGGCAGACTTTCAATACCAAGAGTCAAA...CTCAGTCCCAGATCTGTAGTGTATTGATCTAATGAATTGATACTCTTTAAACGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059579.12 |
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| CDS-3UTR GCA 90 bp | AGGACTGATGAAAACAAGTGTAACTGCACATTCCTAAGAGAAAGAAGTCATATGATAGTCTGGTCTCTTTaGTGTAAGAGACGTTTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: RTDENKCNCTFLRERSHMIVWSL*CKRRLS Trigger: ACTTAAACGTCTCTTACAGCAAAGAGACCAGACTAT...CATATGACTTCTTTCTCTTAGGAATGTGCAGTTACACTTGTTTTCATCAGTCCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059579.12 |
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| CDS-3UTR GCA 90 bp | TTACTGGTTTTGATAATTATCAACATACAGCCAATATTGCTTCTTCCATGCCTCTCCACAGTTTCTTTGTaGGCTTTTTCCATACTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LLVLIIINIQPILLLPCLSTVSL*AFSILF Trigger: GAACAGTATGGAAAAAGCGCACAAAGAAACTGTGGA...GAGGCATGGAAGAAGCAATATTGGCTGTATGTTGATAATTATCAAAACCAGTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213416.2 |
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| CDS-3UTR CAA 90 bp | GAATCTAAGGGTGTCACAGGACACCTCAAGTACACACTGTTGGGCAGAAATGCTTTCCTTGCAGAGCTGTaGGCCCTGCGAGAGCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: ESKGVTGHLKYTLLGRNAFLAEL*ALRELL Trigger: GAGGAGCTCTCGCAGGGCCAACAGCTCTGCAAGGAA...AGCATTTCTGCCCAACAGTGTGTACTTGAGGTGTCCTGTGACACCCTTAGATTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059579.12 ENSMUST00000156680.2 |
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| CDS-3UTR CAA 90 bp | GCCCCACCCCTGCTGCTGCTCTGCCAGCCACTCCATTATTGCATGTTGCATTTTCTTCTTCCTTCCTCCTaGCGATCAAAAGCACACTGC | + |
|
Preference number: 5 (lower is better) Translates to: APPLLLLCQPLHYCMLHFLLPSS*RSKAHC Trigger: GCAGTGTGCTTTTGATCGCAAGGAGGAAGGAAGAAG...AAAATGCAACATGCAATAATGGAGTGGCTGGCAGAGCAGCAGCAGGGGTGGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000059579.12 ENSMUST00000156680.2 |
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| CDS-3UTR CAA 90 bp | GACTTTATGAATGCAGCAGATCCTGCAGACAGGAATCCCCACAGTAAGGCATTGCTTAGACTGCTGACTTaGTGGTGGCCACTGCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: DFMNAADPADRNPHSKALLRLLT*WWPLLW Trigger: CCACAGCAGTGGCCACCACAAAGTCAGCAGTCTAAG...CAATGCCTTACTGTGGGGATTCCTGTCTGCAGGATCTGCTGCATTCATAAAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059579.12 ENSMUST00000156680.2 |
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| CDS-3UTR CAA 90 bp | CACACCATAGTACCTCTGGACAGGTCCACGTTTAAAGAGTATCAATTCATTAGAGCAATCCGACATTCCTaGCAGAGCTGTTGGCCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: HTIVPLDRSTFKEYQFIRAIRHS*QSCWPC Trigger: GCAGGGCCAACAGCTCTGCAAGGAATGTCGGATTGC...TCTAATGAATTGATACTCTTTAAACGTGGACCTGTCCAGAGGTACTATGGTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059579.12 ENSMUST00000156680.2 |
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| CDS-3UTR CAA 90 bp | AATGCTGGTCTCACACTCACTGTGCAGGTGATAATGACCTTGAGCTTCCGATTCGGATCGAACCTGGAGTaGTTCCACAGTTTCTTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: NAGLTLTVQVIMTLSFRFGSNLE*FHSFFV Trigger: CACAAAGAAACTGTGGAACAACTCCAGGTTCGATCC...GAATCGGAAGCTCAAGGTCATTATCACCTGCACAGTGAGTGTGAGACCAGCATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213416.2 |
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| CDS-3UTR CAA 90 bp | AGGACTGATGAAAACAAGTGTAACTGCACATTCCTAAGAGAAAGAAGTCATATGTTCCTTGCAGAGCTGTaGGCCCTGCGAGAGCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: RTDENKCNCTFLRERSHMFLAEL*ALRELL Trigger: GAGGAGCTCTCGCAGGGCCAACAGCTCTGCAAGGAA...CATATGACTTCTTTCTCTTAGGAATGTGCAGTTACACTTGTTTTCATCAGTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059579.12 ENSMUST00000156680.2 |
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| CDS-3UTR CAA 90 bp | ACATGTGACCAGCTTAACAGGCTCATCGGAAAATGCATATTTAGACCAATATACGCAATCCGACATTCCTaGCAGAGCTGTTGGCCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: TCDQLNRLIGKCIFRPIYAIRHS*QSCWPC Trigger: GCAGGGCCAACAGCTCTGCAAGGAATGTCGGATTGC...GTATATTGGTCTAAATATGCATTTTCCGATGAGCCTGTTAAGCTGGTCACATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059579.12 ENSMUST00000156680.2 |
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| CDS-3UTR CAA 90 bp | CACACCATAGTACCTCTGGACAGGTCCACGTTTAAAGAGTATCAATTCATTAGACTTAGACTGCTGACTTaGTGGTGGCCACTGCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: HTIVPLDRSTFKEYQFIRLRLLT*WWPLLW Trigger: CCACAGCAGTGGCCACCACAAAGTCAGCAGTCTAAG...TCTAATGAATTGATACTCTTTAAACGTGGACCTGTCCAGAGGTACTATGGTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059579.12 ENSMUST00000156680.2 |
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| CDS-3UTR CAA 90 bp | GAATCTAAGGGTGTCACAGGACACCTCAAGTACACACTGTTGGGCAGAAATGCTAGTAGTTCTCTGTTTTaGGCCTGGAGTTGTTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: ESKGVTGHLKYTLLGRNASSSLF*AWSCST Trigger: TGTGGAACAACTCCAGGCCAAAAACAGAGAACTACT...AGCATTTCTGCCCAACAGTGTGTACTTGAGGTGTCCTGTGACACCCTTAGATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059579.12 |
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| CDS-3UTR CAA 90 bp | ACATGTGACCAGCTTAACAGGCTCATCGGAAAATGCATATTTAGACCAATATACCTTCTTCCTTCCTCCTaGCGATCAAAAGCACACTGC | + |
|
Preference number: 5 (lower is better) Translates to: TCDQLNRLIGKCIFRPIYLLPSS*RSKAHC Trigger: GCAGTGTGCTTTTGATCGCAAGGAGGAAGGAAGAAG...GTATATTGGTCTAAATATGCATTTTCCGATGAGCCTGTTAAGCTGGTCACATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059579.12 ENSMUST00000156680.2 |
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| CDS-3UTR CAA 90 bp | AATAAGGACTTTATGAATGCAGCAGATCCTGCAGACAGGAATCCCCACAGTAAGAGCACGCTTCCACTCTaGTCAAACTTTTTACCCTTA | + |
|
Preference number: 5 (lower is better) Translates to: NKDFMNAADPADRNPHSKSTLPL*SNFLPL Trigger: TAAGGGTAAAAAGTTTGACAAGAGTGGAAGCGTGCT...CTTACTGTGGGGATTCCTGTCTGCAGGATCTGCTGCATTCATAAAGTCCTTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059579.12 |
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| CDS-3UTR CAA 90 bp | AATAAGGACTTTATGAATGCAGCAGATCCTGCAGACAGGAATCCCCACAGTAAGCTTAGGTGTTCCAAATaGCTTGACATTTTGAGCACA | + |
|
Preference number: 5 (lower is better) Translates to: NKDFMNAADPADRNPHSKLRCSK*LDILST Trigger: TGTGCTCAAAATGTCAAGCAATTTGGAACACCTAAG...CTTACTGTGGGGATTCCTGTCTGCAGGATCTGCTGCATTCATAAAGTCCTTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059579.12 ENSMUST00000156680.2 |
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| CDS-3UTR CAA 90 bp | CACACCATAGTACCTCTGGACAGGTCCACGTTTAAAGAGTATCAATTCATTAGAGGCTTAGATTCCAACTaGGGCTTTTTCTTTGGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: HTIVPLDRSTFKEYQFIRGLDSN*GFFFGV Trigger: AACTCCAAAGAAAAAGCCCAAGTTGGAATCTAAGCC...TCTAATGAATTGATACTCTTTAAACGTGGACCTGTCCAGAGGTACTATGGTGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059579.12 ENSMUST00000156680.2 |
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| CDS-3UTR CAA 90 bp | ACATGTGACCAGCTTAACAGGCTCATCGGAAAATGCATATTTAGACCAATATACTTCTGTAAAACTCTCTaGTATGACAAGGTGCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: TCDQLNRLIGKCIFRPIYFCKTL*YDKVQS Trigger: GCTCTGCACCTTGTCATACAAGAGAGTTTTACAGAA...GTATATTGGTCTAAATATGCATTTTCCGATGAGCCTGTTAAGCTGGTCACATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059579.12 ENSMUST00000156680.2 |
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| CDS-3UTR CAA 90 bp | ACATGTGACCAGCTTAACAGGCTCATCGGAAAATGCATATTTAGACCAATATACCTGATAAGGACAAAATaGTCTGTTCCCCCACTATCT | + |
|
Preference number: 5 (lower is better) Translates to: TCDQLNRLIGKCIFRPIYLIRTK*SVPPLS Trigger: AGATAGTGGGGGAACAGACAATTTTGTCCTTATCAG...GTATATTGGTCTAAATATGCATTTTCCGATGAGCCTGTTAAGCTGGTCACATGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000059579.12 |
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| CDS-3UTR CAA 90 bp | AGGACTGATGAAAACAAGTGTAACTGCACATTCCTAAGAGAAAGAAGTCATATGTTCTGTAAAACTCTCTaGTATGACAAGGTGCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: RTDENKCNCTFLRERSHMFCKTL*YDKVQS Trigger: GCTCTGCACCTTGTCATACAAGAGAGTTTTACAGAA...CATATGACTTCTTTCTCTTAGGAATGTGCAGTTACACTTGTTTTCATCAGTCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059579.12 ENSMUST00000156680.2 |
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| CDS-3UTR CAA 90 bp | CTGGACAGGTCCACGTTTAAAGAGTATCAATTCATTAGATCAATACACTACAGAGGCTTAGATTCCAACTaGGGCTTTTTCTTTGGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: LDRSTFKEYQFIRSIHYRGLDSN*GFFFGV Trigger: AACTCCAAAGAAAAAGCCCAAGTTGGAATCTAAGCC...TCTGTAGTGTATTGATCTAATGAATTGATACTCTTTAAACGTGGACCTGTCCAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059579.12 ENSMUST00000156680.2 |
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| CDS-3UTR CAA 90 bp | CTGGACAGGTCCACGTTTAAAGAGTATCAATTCATTAGATCAATACACTACAGAAAGGCTGCAACCTGTTaGAGTAGTTCTCTGTTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: LDRSTFKEYQFIRSIHYRKAATC*SSSLFL Trigger: CAAAAACAGAGAACTACTCAAACAGGTTGCAGCCTT...TCTGTAGTGTATTGATCTAATGAATTGATACTCTTTAAACGTGGACCTGTCCAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059579.12 |
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| CDS CAA 90 bp | GGAGCACCAGAGAGGGATCGAACCTGGAGTTGTTCCACAGTTTCTTaGTGCGCTTTTTCCATACTGTTCATCTTAGTCCTCAAATTTGAC | + |
|
Preference number: 6 (lower is better) Translates to: GAPERDRTWSCSTVS*CAFSILFILVLKFD Trigger: GTCAAATTTGAGGACTAAGATGAACAGTATGGAAAAAGCGCACAAAGAAACTGTGGAACAACTCCAGGTTCGATCCCTCTCTGGTGCTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213416.2 |
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| CDS TCA 72 bp | CTGCTCACAGGTCTGAGGTGCTCCATATTTCTTTTCTaGATTTGTACAACGCTGACACTTGGTACCAATAAA | + |
|
Preference number: 6 (lower is better) Translates to: LLTGLRCSIFLF*ICTTLTLGTNK Trigger: TTTATTGGTACCAAGTGTCAGCGTTGTACAAATTCAGAAAAGAAATATGGAGCACCTCAGACCTGTGAGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059579.12 ENSMUST00000156680.2 |
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| CDS TCA 72 bp | AGGACAAAATTGTCTGTTCCCCCACTATCTGCTGACTaGTTTATAGAGCTACTATCTCCATTAGATGGCTTA | + |
|
Preference number: 6 (lower is better) Translates to: RTKLSVPPLSAD*FIELLSPLDGL Trigger: TAAGCCATCTAATGGAGATAGTAGCTCTATAAATCAGTCAGCAGATAGTGGGGGAACAGACAATTTTGTCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059579.12 |
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| CDS TCA 72 bp | GATAAGGACAAAATTGTCTGTTCCCCCACTATCTGCTaGCTGATTTATAGAGCTACTATCTCCATTAGATGG | + |
|
Preference number: 6 (lower is better) Translates to: DKDKIVCSPTIC*LIYRATISIRW Trigger: CCATCTAATGGAGATAGTAGCTCTATAAATCAGTCAGCAGATAGTGGGGGAACAGACAATTTTGTCCTTATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059579.12 |
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