Pregenerated sensors for FAM76A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028878Ensembl transcript IDs: ENSMUST00000030696.11, ENSMUST00000097856.10, ENSMUST00000148667.2
Found 96 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGCACAGAGTCTCCAGGTGGCAGTTTTCGAGGTTGGGAGCGGCAGTaGTGTACAGCTGACGACAGACTGCTTGCTCACGGGGATGGCAGG | + |
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Preference number: 1 (lower is better) Translates to: CTESPGGSFRGWERQ*CTADDRLLAHGDGR Trigger: CCTGCCATCCCCGTGAGCAAGCAGTCTGTCGTCAGCTGTACATCACTGCCGCTCCCAACCTCGAAAACTGCCACCTGGAGACTCTGTGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030696.11 ENSMUST00000097856.10 |
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| 3UTR GCA 90 bp | AGGATCCGCTCTAGCTCCAGCACCGCTGGCACTCACTGCAGGGTTTaGTCTGTGTCCCAGCACATACTCCCCATCTCTAGTTCCTTTCCC | + |
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Preference number: 1 (lower is better) Translates to: RIRSSSSTAGTHCRV*SVSQHILPISSSFP Trigger: GGGAAAGGAACTAGAGATGGGGAGTATGTGCTGGGACACAGAGCAAACCCTGCAGTGAGTGCCAGCGGTGCTGGAGCTAGAGCGGATCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030696.11 |
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| 3UTR GCA 90 bp | ACTGCCTTCAGGATCCGCTCTAGCTCCAGCACCGCTGGCACTCACTaGAGGGTTTGCTCTGTGTCCCAGCACATACTCCCCATCTCTAGT | + |
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Preference number: 1 (lower is better) Translates to: TAFRIRSSSSTAGTH*RVCSVSQHILPISS Trigger: ACTAGAGATGGGGAGTATGTGCTGGGACACAGAGCAAACCCTGCAGTGAGTGCCAGCGGTGCTGGAGCTAGAGCGGATCCTGAAGGCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030696.11 |
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| 3UTR-3UTR TCA 90 bp | CATGGGGTCCTCCAAAAGGCACTTAGCTCCACACGTACGCCTCCAACATTACCTCCAGCTCAGCAGCCCTaGCCCGGGAGCACGGGCTTG | + |
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Preference number: 2 (lower is better) Translates to: HGVLQKALSSTRTPPTLPPAQQP*PGSTGL Trigger: CAAGCCCGTGCTCCCGGGTCAGGGCTGCTGAGCTGG...AGGTAATGTTGGAGGCGTACGTGTGGAGCTAAGTGCCTTTTGGAGGACCCCATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030696.11 ENSMUST00000097856.10 |
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| 3UTR-3UTR TCA 90 bp | GAGAAAAAGCCTCCCTCACTGCACAGAGTCTCCAGGTGGCAGTTTTCGAGGTTGCCAGCTCAGCAGCCCTaGCCCGGGAGCACGGGCTTG | + |
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Preference number: 2 (lower is better) Translates to: EKKPPSLHRVSRWQFSRLPAQQP*PGSTGL Trigger: CAAGCCCGTGCTCCCGGGTCAGGGCTGCTGAGCTGG...CAACCTCGAAAACTGCCACCTGGAGACTCTGTGCAGTGAGGGAGGCTTTTTCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030696.11 ENSMUST00000097856.10 |
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| 3UTR-3UTR GCA 90 bp | CTCCTGTCGGGAAGAGCCACTCGAGTGCGGACCGCTGCTCACCTGTGTGCATGTACCGCTGGCACTCACTaGAGGGTTTGCTCTGTGTCC | + |
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Preference number: 2 (lower is better) Translates to: LLSGRATRVRTAAHLCACTAGTH*RVCSVS Trigger: GGACACAGAGCAAACCCTGCAGTGAGTGCCAGCGGT...ACATGCACACAGGTGAGCAGCGGTCCGCACTCGAGTGGCTCTTCCCGACAGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030696.11 |
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| 3UTR-3UTR CCA 90 bp | TCTGACTTTCCATTAAGAACAGGGAGCACGCGGGATGAGGGAGAGAAAGGAAGGCCGGGAGCACGGGCTTaGTGCTGGGAGCCTCCTCAC | + |
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Preference number: 2 (lower is better) Translates to: SDFPLRTGSTRDEGEKGRPGARA*CWEPPH Trigger: GTGAGGAGGCTCCCAGCACCAAGCCCGTGCTCCCGG...CCTTCCTTTCTCTCCCTCATCCCGCGTGCTCCCTGTTCTTAATGGAAAGTCAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030696.11 |
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| 3UTR-3UTR CCA 90 bp | CTCCTGTCGGGAAGAGCCACTCGAGTGCGGACCGCTGCTCACCTGTGTGCATGTGTGTCCAGTACAACCTaGACAAGCATCTTTCTGCCC | + |
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Preference number: 2 (lower is better) Translates to: LLSGRATRVRTAAHLCACVSSTT*TSIFLP Trigger: GGGCAGAAAGATGCTTGTCCAGGTTGTACTGGACAC...ACATGCACACAGGTGAGCAGCGGTCCGCACTCGAGTGGCTCTTCCCGACAGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030696.11 |
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| 3UTR-3UTR CCA 90 bp | GCAAAAGGTTTATTGGTGAGAAAAAGCCTCCCTCACTGCACAGAGTCTCCAGGTCCGGGAGCACGGGCTTaGTGCTGGGAGCCTCCTCAC | + |
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Preference number: 2 (lower is better) Translates to: AKGLLVRKSLPHCTESPGPGARA*CWEPPH Trigger: GTGAGGAGGCTCCCAGCACCAAGCCCGTGCTCCCGG...ACCTGGAGACTCTGTGCAGTGAGGGAGGCTTTTTCTCACCAATAAACCTTTTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030696.11 ENSMUST00000097856.10 |
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| 3UTR-3UTR TCA 90 bp | TTCCATGGGGTCCTCCAAAAGGCACTTAGCTCCACACGTACGCCTCCAACATTACGGGGATGGCAGGTGTaGTGGTGGACAGACACTCTG | + |
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Preference number: 2 (lower is better) Translates to: FHGVLQKALSSTRTPPTLRGWQV*WWTDTL Trigger: CAGAGTGTCTGTCCACCATCACACCTGCCATCCCCG...TAATGTTGGAGGCGTACGTGTGGAGCTAAGTGCCTTTTGGAGGACCCCATGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030696.11 ENSMUST00000097856.10 |
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| 3UTR-3UTR GCA 90 bp | CATGGGGTCCTCCAAAAGGCACTTAGCTCCACACGTACGCCTCCAACATTACCTCAGCTGACGACAGACTaGTTGCTCACGGGGATGGCA | + |
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Preference number: 2 (lower is better) Translates to: HGVLQKALSSTRTPPTLPQLTTD*LLTGMA Trigger: TGCCATCCCCGTGAGCAAGCAGTCTGTCGTCAGCTG...AGGTAATGTTGGAGGCGTACGTGTGGAGCTAAGTGCCTTTTGGAGGACCCCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030696.11 ENSMUST00000097856.10 |
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| 3UTR-3UTR GCA 90 bp | CAGCAGCTTTCCCTGCTTAGAAGGGAAAATTGCACTCCCGACCAGTGTTACAAAGAAGAGCCACTCGAGTaGGGACCGCTGCTCACCTGT | + |
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Preference number: 2 (lower is better) Translates to: QQLSLLRRENCTPDQCYKEEPLE*GPLLTC Trigger: ACAGGTGAGCAGCGGTCCGCACTCGAGTGGCTCTTC...TTTGTAACACTGGTCGGGAGTGCAATTTTCCCTTCTAAGCAGGGAAAGCTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030696.11 |
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| 3UTR-3UTR TCA 90 bp | TTTGCTCTGTGTCCCAGCACATACTCCCCATCTCTAGTTCCTTTCCCAAAGATGGAAAGGAAGGAACAGTaGGGTCCTCCCCACCGTGCA | + |
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Preference number: 2 (lower is better) Translates to: FALCPSTYSPSLVPFPKMERKEQ*GPPHRA Trigger: TGCACGGTGGGGAGGACCTCACTGTTCCTTCCTTTC...CATCTTTGGGAAAGGAACTAGAGATGGGGAGTATGTGCTGGGACACAGAGCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030696.11 |
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| 3UTR-3UTR TCA 90 bp | TTTGCTCTGTGTCCCAGCACATACTCCCCATCTCTAGTTCCTTTCCCAAAGATGCGTGACACTGAGCAGTaGCCACTATGGAAAACAGAG | + |
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Preference number: 2 (lower is better) Translates to: FALCPSTYSPSLVPFPKMRDTEQ*PLWKTE Trigger: CTCTGTTTTCCATAGTGGTCACTGCTCAGTGTCACG...CATCTTTGGGAAAGGAACTAGAGATGGGGAGTATGTGCTGGGACACAGAGCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030696.11 |
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| 3UTR-3UTR TCA 90 bp | AGCATCTTTCTGCCCTACTTAAAGACAGACTGGCCATACTCAGCAACCGTCCTTCGTGACACTGAGCAGTaGCCACTATGGAAAACAGAG | + |
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Preference number: 2 (lower is better) Translates to: SIFLPYLKTDWPYSATVLRDTEQ*PLWKTE Trigger: CTCTGTTTTCCATAGTGGTCACTGCTCAGTGTCACG...AAGGACGGTTGCTGAGTATGGCCAGTCTGTCTTTAAGTAGGGCAGAAAGATGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030696.11 ENSMUST00000097856.10 |
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| 3UTR-3UTR TCA 90 bp | TCTGACTTTCCATTAAGAACAGGGAGCACGCGGGATGAGGGAGAGAAAGGAAGGCAAAAGGTTTATTGGTaGGAAAAAGCCTCCCTCACT | + |
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Preference number: 2 (lower is better) Translates to: SDFPLRTGSTRDEGEKGRQKVYW*EKASLT Trigger: AGTGAGGGAGGCTTTTTCTCACCAATAAACCTTTTG...CCTTCCTTTCTCTCCCTCATCCCGCGTGCTCCCTGTTCTTAATGGAAAGTCAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030696.11 |
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| 3UTR-3UTR TCA 90 bp | TTCCATGGGGTCCTCCAAAAGGCACTTAGCTCCACACGTACGCCTCCAACATTACCCAAGAGTATACCCTaGAGCAAAAGGTTTATTGGT | + |
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Preference number: 2 (lower is better) Translates to: FHGVLQKALSSTRTPPTLPKSIP*SKRFIG Trigger: ACCAATAAACCTTTTGCTTCAGGGTATACTCTTGGG...TAATGTTGGAGGCGTACGTGTGGAGCTAAGTGCCTTTTGGAGGACCCCATGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030696.11 ENSMUST00000097856.10 |
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| 3UTR-3UTR TCA 90 bp | AGCATCTTTCTGCCCTACTTAAAGACAGACTGGCCATACTCAGCAACCGTCCTTAAGACTCTAAGGCAATaGGAAAGAAAAGGTTGCGTT | + |
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Preference number: 2 (lower is better) Translates to: SIFLPYLKTDWPYSATVLKTLRQ*ERKGCV Trigger: AACGCAACCTTTTCTTTCTCATTGCCTTAGAGTCTT...AAGGACGGTTGCTGAGTATGGCCAGTCTGTCTTTAAGTAGGGCAGAAAGATGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030696.11 ENSMUST00000097856.10 |
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| 3UTR-3UTR TCA 90 bp | ACGCCTCCAACATTACCTCAGCATCAAGACTCTAAGGCAATGAGAAAGAAAAGGCAAAAGGTTTATTGGTaGGAAAAAGCCTCCCTCACT | + |
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Preference number: 2 (lower is better) Translates to: TPPTLPQHQDSKAMRKKRQKVYW*EKASLT Trigger: AGTGAGGGAGGCTTTTTCTCACCAATAAACCTTTTG...CCTTTTCTTTCTCATTGCCTTAGAGTCTTGATGCTGAGGTAATGTTGGAGGCGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000030696.11 ENSMUST00000097856.10 |
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| 3UTR GCA 72 bp | GAGAGAAAGGAAGGAACAGTGAGGTCCTCCCCACCGTaGAGCCCACACCCAAGCAACCCATGCCAACCCTCG | + |
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Preference number: 3 (lower is better) Translates to: ERKEGTVRSSPP*SPHPSNPCQPS Trigger: CGAGGGTTGGCATGGGTTGCTTGGGTGTGGGCTGCACGGTGGGGAGGACCTCACTGTTCCTTCCTTTCTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030696.11 |
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| 3UTR GCA 72 bp | AGGATCCGCTCTAGCTCCAGCACCGCTGGCACTCACTaGAGGGTTTGCTCTGTGTCCCAGCACATACTCCCC | + |
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Preference number: 3 (lower is better) Translates to: RIRSSSSTAGTH*RVCSVSQHILP Trigger: GGGGAGTATGTGCTGGGACACAGAGCAAACCCTGCAGTGAGTGCCAGCGGTGCTGGAGCTAGAGCGGATCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030696.11 |
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| 3UTR GCA 72 bp | GTTGGGAGCGGCAGTGATGTACAGCTGACGACAGACTaGTTGCTCACGGGGATGGCAGGTGTGATGGTGGAC | + |
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Preference number: 3 (lower is better) Translates to: VGSGSDVQLTTD*LLTGMAGVMVD Trigger: GTCCACCATCACACCTGCCATCCCCGTGAGCAAGCAGTCTGTCGTCAGCTGTACATCACTGCCGCTCCCAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030696.11 ENSMUST00000097856.10 |
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| 3UTR GCA 72 bp | GTCCTTCGAATCTCCTGTCGGGAAGAGCCACTCGAGTaGGGACCGCTGCTCACCTGTGTGCATGTGACTCTT | + |
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Preference number: 3 (lower is better) Translates to: VLRISCREEPLE*GPLLTCVHVTL Trigger: AAGAGTCACATGCACACAGGTGAGCAGCGGTCCGCACTCGAGTGGCTCTTCCCGACAGGAGATTCGAAGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030696.11 |
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| 3UTR GCA 72 bp | GGAAAGGAGGAGGTCTGGGACCCTAACCGCTCAGCATaGAGCCATAACAGGGCACAGACCAGGAGTTCCTTT | + |
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Preference number: 3 (lower is better) Translates to: GKEEVWDPNRSA*SHNRAQTRSSF Trigger: AAAGGAACTCCTGGTCTGTGCCCTGTTATGGCTGCATGCTGAGCGGTTAGGGTCCCAGACCTCCTCCTTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030696.11 ENSMUST00000097856.10 |
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| 3UTR GCA 72 bp | TCTAGCTCCAGCACCGCTGGCACTCACTGCAGGGTTTaGTCTGTGTCCCAGCACATACTCCCCATCTCTAGT | + |
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Preference number: 3 (lower is better) Translates to: SSSSTAGTHCRV*SVSQHILPISS Trigger: ACTAGAGATGGGGAGTATGTGCTGGGACACAGAGCAAACCCTGCAGTGAGTGCCAGCGGTGCTGGAGCTAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030696.11 |
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| 3UTR CCA 72 bp | GAGAAAAAGCCTCCCTCACTGCACAGAGTCTCCAGGTaGCAGTTTTCGAGGTTGGGAGCGGCAGTGATGTAC | + |
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Preference number: 3 (lower is better) Translates to: EKKPPSLHRVSR*QFSRLGAAVMY Trigger: GTACATCACTGCCGCTCCCAACCTCGAAAACTGCCACCTGGAGACTCTGTGCAGTGAGGGAGGCTTTTTCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030696.11 ENSMUST00000097856.10 |
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| 3UTR-3UTR CAA 90 bp | AGCTTTCCCTGCTTAGAAGGGAAAATTGCACTCCCGACCAGTGTTACAAAAACACACTCACTGCAGGGTTaGCTCTGTGTCCCAGCACAT | + |
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Preference number: 3 (lower is better) Translates to: SFPCLEGKIALPTSVTKTHSLQG*LCVPAH Trigger: ATGTGCTGGGACACAGAGCAAACCCTGCAGTGAGTG...TGTTTTTGTAACACTGGTCGGGAGTGCAATTTTCCCTTCTAAGCAGGGAAAGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030696.11 |
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| 3UTR-3UTR CAA 90 bp | CATGGGGTCCTCCAAAAGGCACTTAGCTCCACACGTACGCCTCCAACATTACCTATGAGAAAGAAAAGGTaGCGTTCTTCTACTAAAAGC | + |
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Preference number: 3 (lower is better) Translates to: HGVLQKALSSTRTPPTLPMRKKR*RSSTKS Trigger: GCTTTTAGTAGAAGAACGCAACCTTTTCTTTCTCAT...AGGTAATGTTGGAGGCGTACGTGTGGAGCTAAGTGCCTTTTGGAGGACCCCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000030696.11 ENSMUST00000097856.10 |
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| 3UTR TCA 72 bp | ACCCAAGAGTATACCCTGAAGCAAAAGGTTTATTGGTaGGAAAAAGCCTCCCTCACTGCACAGAGTCTCCAG | + |
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Preference number: 3 (lower is better) Translates to: TQEYTLKQKVYW*EKASLTAQSLQ Trigger: CTGGAGACTCTGTGCAGTGAGGGAGGCTTTTTCTCACCAATAAACCTTTTGCTTCAGGGTATACTCTTGGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030696.11 ENSMUST00000097856.10 |
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| 3UTR TCA 72 bp | ACACCACACCAACAATTTCTCAGTCTTACTTTTCATTaGCGAAACCATGACTGTTATTCTTTTCCTACCATC | + |
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Preference number: 3 (lower is better) Translates to: TPHQQFLSLTFH*RNHDCYSFPTI Trigger: GATGGTAGGAAAAGAATAACAGTCATGGTTTCGTCAATGAAAAGTAAGACTGAGAAATTGTTGGTGTGGTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030696.11 |
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| CDS-3UTR GCA 90 bp | GAGACCAGCCAGCTCAGCAGCCCTGACCCGGGAGCACGGGCTTGGTGCTGGGAGCAATCCGGCATTCCTTaGACAGCTGCTGCCCCTGAG | + |
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Preference number: 4 (lower is better) Translates to: ETSQLSSPDPGARAWCWEQSGIP*TAAAPE Trigger: CTCAGGGGCAGCAGCTGTGCAAGGAATGCCGGATTG...CTCCCAGCACCAAGCCCGTGCTCCCGGGTCAGGGCTGCTGAGCTGGCTGGTCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030696.11 ENSMUST00000097856.10 |
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| CDS-3UTR TCA 90 bp | ACTTCCCAGAGACCAGCCAGCTCAGCAGCCCTGACCCGGGAGCACGGGCTTGGTTACTGCTCCTTCTCCTaGTGGCTGCCTCGAGAAGAG | + |
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Preference number: 4 (lower is better) Translates to: TSQRPASSAALTREHGLGYCSFS*WLPREE Trigger: CTCTTCTCGAGGCAGCCATCAGGAGAAGGAGCAGTA...ACCAAGCCCGTGCTCCCGGGTCAGGGCTGCTGAGCTGGCTGGTCTCTGGGAAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030696.11 ENSMUST00000097856.10 |
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| CDS-3UTR GCA 90 bp | ACTTCCCAGAGACCAGCCAGCTCAGCAGCCCTGACCCGGGAGCACGGGCTTGGTCCTTCTCCTGATGGCTaGCTCGAGAAGAGCTGCTCA | + |
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Preference number: 4 (lower is better) Translates to: TSQRPASSAALTREHGLGPSPDG*LEKSCS Trigger: TGAGCAGCTCTTCTCGAGGCAGCCATCAGGAGAAGG...ACCAAGCCCGTGCTCCCGGGTCAGGGCTGCTGAGCTGGCTGGTCTCTGGGAAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030696.11 ENSMUST00000097856.10 |
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| CDS-3UTR GCA 90 bp | GAGACCAGCCAGCTCAGCAGCCCTGACCCGGGAGCACGGGCTTGGTGCTGGGAGATCCTTCCTGTCAAATaGACACTGCTGCTTGCACTG | + |
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Preference number: 4 (lower is better) Translates to: ETSQLSSPDPGARAWCWEILPVK*TLLLAL Trigger: CAGTGCAAGCAGCAGTGTGCATTTGACAGGAAGGAT...CTCCCAGCACCAAGCCCGTGCTCCCGGGTCAGGGCTGCTGAGCTGGCTGGTCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030696.11 ENSMUST00000097856.10 |
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| CDS-3UTR GCA 90 bp | GAGACCAGCCAGCTCAGCAGCCCTGACCCGGGAGCACGGGCTTGGTGCTGGGAGACTTCTCAGACTTCTTaGTCTTGGACAAGGCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: ETSQLSSPDPGARAWCWETSQTS*SWTRQL Trigger: CAGCTGCCTTGTCCAAGAGCAAGAAGTCTGAGAAGT...CTCCCAGCACCAAGCCCGTGCTCCCGGGTCAGGGCTGCTGAGCTGGCTGGTCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030696.11 ENSMUST00000097856.10 |
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| CDS-3UTR GCA 90 bp | CTCAGCAGCCCTGACCCGGGAGCACGGGCTTGGTGCTGGGAGCCTCCTCACGTCACGGAGACGTTATGGTaGCTGACTTCTCAGACTTCT | + |
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Preference number: 4 (lower is better) Translates to: LSSPDPGARAWCWEPPHVTETLW*LTSQTS Trigger: AGAAGTCTGAGAAGTCAGGCACCATAACGTCTCCGT...GACGTGAGGAGGCTCCCAGCACCAAGCCCGTGCTCCCGGGTCAGGGCTGCTGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030696.11 ENSMUST00000097856.10 |
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| CDS-3UTR CCA 90 bp | GAGACCAGCCAGCTCAGCAGCCCTGACCCGGGAGCACGGGCTTGGTGCTGGGAGTCTGTGACCTCCTTGTaGGTTTTCTCCATTTGGTTC | + |
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Preference number: 4 (lower is better) Translates to: ETSQLSSPDPGARAWCWESVTSL*VFSIWF Trigger: GAACCAAATGGAGAAAACCCACAAGGAGGTCACAGA...CTCCCAGCACCAAGCCCGTGCTCCCGGGTCAGGGCTGCTGAGCTGGCTGGTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030696.11 ENSMUST00000097856.10 |
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| 3UTR CAA 72 bp | GGGAGCGGCAGTGATGTACAGCTGACGACAGACTGCTaGCTCACGGGGATGGCAGGTGTGATGGTGGACAGA | + |
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Preference number: 4 (lower is better) Translates to: GSGSDVQLTTDC*LTGMAGVMVDR Trigger: TCTGTCCACCATCACACCTGCCATCCCCGTGAGCAAGCAGTCTGTCGTCAGCTGTACATCACTGCCGCTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030696.11 ENSMUST00000097856.10 |
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| CDS-3UTR TCA 90 bp | CTCCTGTCGGGAAGAGCCACTCGAGTGCGGACCGCTGCTCACCTGTGTGCATGTTGCTCTTTGGTCTTCTaGAGGACACGCTTGTACGAC | + |
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Preference number: 4 (lower is better) Translates to: LLSGRATRVRTAAHLCACCSLVF*RTRLYD Trigger: GTCGTACAAGCGTGTCCTTCAGAAGACCAAAGAGCA...ACATGCACACAGGTGAGCAGCGGTCCGCACTCGAGTGGCTCTTCCCGACAGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030696.11 |
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| CDS-3UTR GCA 90 bp | AAGCCTCCCTCACTGCACAGAGTCTCCAGGTGGCAGTTTTCGAGGTTGGGAGCGTGCCTCGAGAAGAGCTaGTCAGGTGCTTCCTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: KPPSLHRVSRWQFSRLGACLEKS*SGASSA Trigger: AGCAGAGGAAGCACCTGAGCAGCTCTTCTCGAGGCA...CGCTCCCAACCTCGAAAACTGCCACCTGGAGACTCTGTGCAGTGAGGGAGGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030696.11 ENSMUST00000097856.10 |
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| CDS-3UTR CCA 90 bp | CTCAGCAGCCCTGACCCGGGAGCACGGGCTTGGTGCTGGGAGCCTCCTCACGTCTCTTGCAAATTGTATTaGTTTTACTCTCCTGCTGGT | + |
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Preference number: 4 (lower is better) Translates to: LSSPDPGARAWCWEPPHVSCKLY*FYSPAG Trigger: ACCAGCAGGAGAGTAAAACCAATACAATTTGCAAGA...GACGTGAGGAGGCTCCCAGCACCAAGCCCGTGCTCCCGGGTCAGGGCTGCTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030696.11 ENSMUST00000097856.10 |
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| CDS-3UTR CCA 90 bp | GAGACCAGCCAGCTCAGCAGCCCTGACCCGGGAGCACGGGCTTGGTGCTGGGAGGAATTTGTGCAGCGCTaGCATTTATTCCCAATAAAT | + |
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Preference number: 4 (lower is better) Translates to: ETSQLSSPDPGARAWCWEEFVQR*HLFPIN Trigger: ATTTATTGGGAATAAATGCCAGCGCTGCACAAATTC...CTCCCAGCACCAAGCCCGTGCTCCCGGGTCAGGGCTGCTGAGCTGGCTGGTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030696.11 ENSMUST00000097856.10 |
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| CDS-3UTR TCA 90 bp | AAGCCTCCCTCACTGCACAGAGTCTCCAGGTGGCAGTTTTCGAGGTTGGGAGCGTCCATACTTCTTCTCTaGATTTGTGCAGCGCTGGCA | + |
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Preference number: 4 (lower is better) Translates to: KPPSLHRVSRWQFSRLGASILLL*ICAALA Trigger: TGCCAGCGCTGCACAAATTCAGAGAAGAAGTATGGA...CGCTCCCAACCTCGAAAACTGCCACCTGGAGACTCTGTGCAGTGAGGGAGGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030696.11 ENSMUST00000097856.10 |
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| CDS-3UTR GCA 90 bp | GCCACTCGAGTGCGGACCGCTGCTCACCTGTGTGCATGTGACTCTTTGGAGAACTTGGTTTTACTCTCCTaGTGGTACTCGGTCCTACAG | + |
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Preference number: 4 (lower is better) Translates to: ATRVRTAAHLCACDSLENLVLLS*WYSVLQ Trigger: CTGTAGGACCGAGTACCAGCAGGAGAGTAAAACCAA...GTTCTCCAAAGAGTCACATGCACACAGGTGAGCAGCGGTCCGCACTCGAGTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030696.11 |
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| CDS-3UTR GCA 90 bp | GAGAAAAAGCCTCCCTCACTGCACAGAGTCTCCAGGTGGCAGTTTTCGAGGTTGAGCTGTTGTAATGGCTaGCTCCACTCAGGCGGCTGT | + |
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Preference number: 4 (lower is better) Translates to: EKKPPSLHRVSRWQFSRLSCCNG*LHSGGC Trigger: ACAGCCGCCTGAGTGGAGGCAGCCATTACAACAGCT...CAACCTCGAAAACTGCCACCTGGAGACTCTGTGCAGTGAGGGAGGCTTTTTCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097856.10 |
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| 3UTR CAA 72 bp | GTGCGGACCGCTGCTCACCTGTGTGCATGTGACTCTTaGGAGAACGTAATCCCAGACTACAGAGCAGGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: VRTAAHLCACDS*ENVIPDYRAGE Trigger: TTCACCTGCTCTGTAGTCTGGGATTACGTTCTCCAAAGAGTCACATGCACACAGGTGAGCAGCGGTCCGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030696.11 |
||
| CDS-3UTR TCA 90 bp | TTCCATGGGGTCCTCCAAAAGGCACTTAGCTCCACACGTACGCCTCCAACATTATACTGCTCCTTCTCCTaGTGGCTGCCTCGAGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: FHGVLQKALSSTRTPPTLYCSFS*WLPREE Trigger: CTCTTCTCGAGGCAGCCATCAGGAGAAGGAGCAGTA...TAATGTTGGAGGCGTACGTGTGGAGCTAAGTGCCTTTTGGAGGACCCCATGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030696.11 ENSMUST00000097856.10 |
||
| CDS-3UTR GCA 90 bp | TTCCATGGGGTCCTCCAAAAGGCACTTAGCTCCACACGTACGCCTCCAACATTATGCCTCGAGAAGAGCTaGTCAGGTGCTTCCTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: FHGVLQKALSSTRTPPTLCLEKS*SGASSA Trigger: AGCAGAGGAAGCACCTGAGCAGCTCTTCTCGAGGCA...TAATGTTGGAGGCGTACGTGTGGAGCTAAGTGCCTTTTGGAGGACCCCATGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030696.11 ENSMUST00000097856.10 |
||
| CDS-3UTR GCA 90 bp | GAGAAAAAGCCTCCCTCACTGCACAGAGTCTCCAGGTGGCAGTTTTCGAGGTTGTCTCGGTTTTTGGCCTaGAGTTGCTCTGTGACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: EKKPPSLHRVSRWQFSRLSRFLA*SCSVTS Trigger: GGAGGTCACAGAGCAACTGCAGGCCAAAAACCGAGA...CAACCTCGAAAACTGCCACCTGGAGACTCTGTGCAGTGAGGGAGGCTTTTTCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000030696.11 ENSMUST00000097856.10 |
||
| CDS-3UTR GCA 90 bp | AAAAGGTTTATTGGTGAGAAAAAGCCTCCCTCACTGCACAGAGTCTCCAGGTGGCAATCCGGCATTCCTTaGACAGCTGCTGCCCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: KRFIGEKKPPSLHRVSRWQSGIP*TAAAPE Trigger: CTCAGGGGCAGCAGCTGTGCAAGGAATGCCGGATTG...CCACCTGGAGACTCTGTGCAGTGAGGGAGGCTTTTTCTCACCAATAAACCTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000030696.11 ENSMUST00000097856.10 |
||
| CDS-3UTR GCA 90 bp | GCAAAAGGTTTATTGGTGAGAAAAAGCCTCCCTCACTGCACAGAGTCTCCAGGTGGCTGTTGTAATGGCTaGCTCCACTCAGGCGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: AKGLLVRKSLPHCTESPGGCCNG*LHSGGC Trigger: ACAGCCGCCTGAGTGGAGGCAGCCATTACAACAGCC...ACCTGGAGACTCTGTGCAGTGAGGGAGGCTTTTTCTCACCAATAAACCTTTTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030696.11 |
||
| CDS-3UTR CCA 90 bp | GAGAAAAAGCCTCCCTCACTGCACAGAGTCTCCAGGTGGCAGTTTTCGAGGTTGGCAATGATGACAAAGTaGTCAGTGCCTGGGGAATCC | + |
|
Preference number: 4 (lower is better) Translates to: EKKPPSLHRVSRWQFSRLAMMTK*SVPGES Trigger: GGATTCCCCAGGCACTGACCACTTTGTCATCATTGC...CAACCTCGAAAACTGCCACCTGGAGACTCTGTGCAGTGAGGGAGGCTTTTTCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000030696.11 ENSMUST00000097856.10 |
||
| CDS-3UTR TCA 90 bp | CATGGGGTCCTCCAAAAGGCACTTAGCTCCACACGTACGCCTCCAACATTACCTAGACGTTATGGTGCCTaGCTTCTCAGACTTCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: HGVLQKALSSTRTPPTLPRRYGA*LLRLLA Trigger: AGCAAGAAGTCTGAGAAGTCAGGCACCATAACGTCT...AGGTAATGTTGGAGGCGTACGTGTGGAGCTAAGTGCCTTTTGGAGGACCCCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030696.11 ENSMUST00000097856.10 |
||
| CDS-3UTR GCA 90 bp | CTCCCCATCTCTAGTTCCTTTCCCAAAGATGGAGGGGCGCAGCTCCTTCCCACATCTTCTCTGAATTTGTaGAGCGCTGGCATTTATTCC | + |
|
Preference number: 4 (lower is better) Translates to: LPISSSFPKDGGAQLLPTSSLNL*SAGIYS Trigger: GGAATAAATGCCAGCGCTGCACAAATTCAGAGAAGA...TGTGGGAAGGAGCTGCGCCCCTCCATCTTTGGGAAAGGAACTAGAGATGGGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030696.11 |
||
| CDS-3UTR GCA 90 bp | AGCATCTTTCTGCCCTACTTAAAGACAGACTGGCCATACTCAGCAACCGTCCTTCCTTCTCCTGATGGCTaGCTCGAGAAGAGCTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SIFLPYLKTDWPYSATVLPSPDG*LEKSCS Trigger: TGAGCAGCTCTTCTCGAGGCAGCCATCAGGAGAAGG...AAGGACGGTTGCTGAGTATGGCCAGTCTGTCTTTAAGTAGGGCAGAAAGATGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030696.11 ENSMUST00000097856.10 |
||
| CDS-3UTR GCA 90 bp | GCACTCCCGACCAGTGTTACAAAAACACAGTCCTTCGAATCTCCTGTCGGGAAGTTTTTGGCCTGCAGTTaGTCTGTGACCTCCTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ALPTSVTKTQSFESPVGKFLACS*SVTSLW Trigger: CCACAAGGAGGTCACAGAGCAACTGCAGGCCAAAAA...CTTCCCGACAGGAGATTCGAAGGACTGTGTTTTTGTAACACTGGTCGGGAGTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030696.11 |
||
| CDS-3UTR GCA 90 bp | TTCCATGGGGTCCTCCAAAAGGCACTTAGCTCCACACGTACGCCTCCAACATTATTTTTGGCCTGCAGTTaGTCTGTGACCTCCTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: FHGVLQKALSSTRTPPTLFLACS*SVTSLW Trigger: CCACAAGGAGGTCACAGAGCAACTGCAGGCCAAAAA...TAATGTTGGAGGCGTACGTGTGGAGCTAAGTGCCTTTTGGAGGACCCCATGGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000030696.11 ENSMUST00000097856.10 |
||
| CDS-3UTR GCA 90 bp | TGTTACAAAAACACAGTCCTTCGAATCTCCTGTCGGGAAGAGCCACTCGAGTGCTCTCGGTTTTTGGCCTaGAGTTGCTCTGTGACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: CYKNTVLRISCREEPLECSRFLA*SCSVTS Trigger: GGAGGTCACAGAGCAACTGCAGGCCAAAAACCGAGA...GCACTCGAGTGGCTCTTCCCGACAGGAGATTCGAAGGACTGTGTTTTTGTAACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030696.11 |
||
| CDS-3UTR CCA 90 bp | CGAGTGCGGACCGCTGCTCACCTGTGTGCATGTGACTCTTTGGAGAACGTAATCCTGTTCACAGGAATATaGGGGTCCATACTTCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RVRTAAHLCACDSLENVILFTGI*GSILLL Trigger: GAGAAGAAGTATGGACCCCCATATTCCTGTGAACAG...GATTACGTTCTCCAAAGAGTCACATGCACACAGGTGAGCAGCGGTCCGCACTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030696.11 |
||
| CDS-3UTR CCA 90 bp | AGCATCTTTCTGCCCTACTTAAAGACAGACTGGCCATACTCAGCAACCGTCCTTAAAGTGGTCAGTGCCTaGGGAATCCAGAGCCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SIFLPYLKTDWPYSATVLKVVSA*GIQSQV Trigger: GACCTGGCTCTGGATTCCCCAGGCACTGACCACTTT...AAGGACGGTTGCTGAGTATGGCCAGTCTGTCTTTAAGTAGGGCAGAAAGATGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030696.11 ENSMUST00000097856.10 |
||
| CDS-3UTR TCA 90 bp | TTCCATGGGGTCCTCCAAAAGGCACTTAGCTCCACACGTACGCCTCCAACATTAAGACGTTATGGTGCCTaGCTTCTCAGACTTCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: FHGVLQKALSSTRTPPTLRRYGA*LLRLLA Trigger: AGCAAGAAGTCTGAGAAGTCAGGCACCATAACGTCT...TAATGTTGGAGGCGTACGTGTGGAGCTAAGTGCCTTTTGGAGGACCCCATGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030696.11 ENSMUST00000097856.10 |
||
| CDS-3UTR GCA 90 bp | GCAAAAGGTTTATTGGTGAGAAAAAGCCTCCCTCACTGCACAGAGTCTCCAGGTCTTGGACAAGGCAGCTaGCTGTTTCAGAAGCTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: AKGLLVRKSLPHCTESPGLGQGS*LFQKLS Trigger: CGAGAGCTTCTGAAACAGGCAGCTGCCTTGTCCAAG...ACCTGGAGACTCTGTGCAGTGAGGGAGGCTTTTTCTCACCAATAAACCTTTTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030696.11 ENSMUST00000097856.10 |
||
| CDS-3UTR GCA 90 bp | TTCCATGGGGTCCTCCAAAAGGCACTTAGCTCCACACGTACGCCTCCAACATTAACGGAGACGTTATGGTaGCTGACTTCTCAGACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FHGVLQKALSSTRTPPTLTETLW*LTSQTS Trigger: AGAAGTCTGAGAAGTCAGGCACCATAACGTCTCCGT...TAATGTTGGAGGCGTACGTGTGGAGCTAAGTGCCTTTTGGAGGACCCCATGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030696.11 ENSMUST00000097856.10 |
||
| CDS-3UTR TCA 90 bp | GAGAAAAAGCCTCCCTCACTGCACAGAGTCTCCAGGTGGCAGTTTTCGAGGTTGATTATGTTGCAATACTaGCAAGGCTTAGGCGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: EKKPPSLHRVSRWQFSRLIMLQY*QGLGVP Trigger: TGGAACGCCTAAGCCTTGTCAGTATTGCAACATAAT...CAACCTCGAAAACTGCCACCTGGAGACTCTGTGCAGTGAGGGAGGCTTTTTCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030696.11 ENSMUST00000097856.10 |
||
| CDS-3UTR CCA 90 bp | AAAAGGTTTATTGGTGAGAAAAAGCCTCCCTCACTGCACAGAGTCTCCAGGTGGATCCAGAGCCAGGTCTaGAGAAAAGCTGTCTCCGTT | + |
|
Preference number: 4 (lower is better) Translates to: KRFIGEKKPPSLHRVSRWIQSQV*RKAVSV Trigger: AACGGAGACAGCTTTTCTCCAGACCTGGCTCTGGAT...CCACCTGGAGACTCTGTGCAGTGAGGGAGGCTTTTTCTCACCAATAAACCTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030696.11 |
||
| CDS-3UTR CCA 90 bp | GTATACCCTGAAGCAAAAGGTTTATTGGTGAGAAAAAGCCTCCCTCACTGCACAAAAGTGGTCAGTGCCTaGGGAATCCAGAGCCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: VYPEAKGLLVRKSLPHCTKVVSA*GIQSQV Trigger: GACCTGGCTCTGGATTCCCCAGGCACTGACCACTTT...TGTGCAGTGAGGGAGGCTTTTTCTCACCAATAAACCTTTTGCTTCAGGGTATAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000030696.11 ENSMUST00000097856.10 |
||
| CDS-3UTR CCA 90 bp | AAAAGGTTTATTGGTGAGAAAAAGCCTCCCTCACTGCACAGAGTCTCCAGGTGGGCAATGATGACAAAGTaGTCAGTGCCTGGGGAATCC | + |
|
Preference number: 4 (lower is better) Translates to: KRFIGEKKPPSLHRVSRWAMMTK*SVPGES Trigger: GGATTCCCCAGGCACTGACCACTTTGTCATCATTGC...CCACCTGGAGACTCTGTGCAGTGAGGGAGGCTTTTTCTCACCAATAAACCTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000030696.11 ENSMUST00000097856.10 |
||
| CDS-3UTR CCA 90 bp | TTCCATGGGGTCCTCCAAAAGGCACTTAGCTCCACACGTACGCCTCCAACATTAATCCAGAGCCAGGTCTaGAGAAAAGCTGTTGTAATG | + |
|
Preference number: 4 (lower is better) Translates to: FHGVLQKALSSTRTPPTLIQSQV*RKAVVM Trigger: CATTACAACAGCTTTTCTCCAGACCTGGCTCTGGAT...TAATGTTGGAGGCGTACGTGTGGAGCTAAGTGCCTTTTGGAGGACCCCATGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000097856.10 |
||
| CDS-3UTR TCA 90 bp | TTCCATGGGGTCCTCCAAAAGGCACTTAGCTCCACACGTACGCCTCCAACATTAATTATGTTGCAATACTaGCAAGGCTTAGGCGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: FHGVLQKALSSTRTPPTLIMLQY*QGLGVP Trigger: TGGAACGCCTAAGCCTTGTCAGTATTGCAACATAAT...TAATGTTGGAGGCGTACGTGTGGAGCTAAGTGCCTTTTGGAGGACCCCATGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030696.11 ENSMUST00000097856.10 |
||
| CDS-3UTR TCA 90 bp | GCAAAAGGTTTATTGGTGAGAAAAAGCCTCCCTCACTGCACAGAGTCTCCAGGTACCTCTTCCTTCAGCTaGGCAATGATGACAAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: AKGLLVRKSLPHCTESPGTSSFS*AMMTKW Trigger: CCACTTTGTCATCATTGCTCAGCTGAAGGAAGAGGT...ACCTGGAGACTCTGTGCAGTGAGGGAGGCTTTTTCTCACCAATAAACCTTTTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030696.11 ENSMUST00000097856.10 |
||
| CDS-3UTR GCA 90 bp | AGCATCTTTCTGCCCTACTTAAAGACAGACTGGCCATACTCAGCAACCGTCCTTTTGGTTTTACTCTCCTaGTGGTACTCGGTCCTACAG | + |
|
Preference number: 4 (lower is better) Translates to: SIFLPYLKTDWPYSATVLLVLLS*WYSVLQ Trigger: CTGTAGGACCGAGTACCAGCAGGAGAGTAAAACCAA...AAGGACGGTTGCTGAGTATGGCCAGTCTGTCTTTAAGTAGGGCAGAAAGATGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030696.11 ENSMUST00000097856.10 |
||
| CDS-3UTR GCA 90 bp | AGCATCTTTCTGCCCTACTTAAAGACAGACTGGCCATACTCAGCAACCGTCCTTATCCTTCCTGTCAAATaGACACTGCTGCTTGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: SIFLPYLKTDWPYSATVLILPVK*TLLLAL Trigger: CAGTGCAAGCAGCAGTGTGCATTTGACAGGAAGGAT...AAGGACGGTTGCTGAGTATGGCCAGTCTGTCTTTAAGTAGGGCAGAAAGATGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030696.11 ENSMUST00000097856.10 |
||
| CDS-3UTR GCA 90 bp | AGCTTTCCCTGCTTAGAAGGGAAAATTGCACTCCCGACCAGTGTTACAAAAACACTTGGACAAGGCAGCTaGCTGTTTCAGAAGCTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: SFPCLEGKIALPTSVTKTLGQGS*LFQKLS Trigger: CGAGAGCTTCTGAAACAGGCAGCTGCCTTGTCCAAG...TGTTTTTGTAACACTGGTCGGGAGTGCAATTTTCCCTTCTAAGCAGGGAAAGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030696.11 |
||
| CDS-3UTR GCA 90 bp | GCAAAAGGTTTATTGGTGAGAAAAAGCCTCCCTCACTGCACAGAGTCTCCAGGTACTTCTCAGACTTCTTaGTCTTGGACAAGGCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: AKGLLVRKSLPHCTESPGTSQTS*SWTRQL Trigger: CAGCTGCCTTGTCCAAGAGCAAGAAGTCTGAGAAGT...ACCTGGAGACTCTGTGCAGTGAGGGAGGCTTTTTCTCACCAATAAACCTTTTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030696.11 ENSMUST00000097856.10 |
||
| CDS-3UTR TCA 90 bp | CATGGGGTCCTCCAAAAGGCACTTAGCTCCACACGTACGCCTCCAACATTACCTTACAACTGTACATTCTaGGCACACTTCTTGCAAATT | + |
|
Preference number: 4 (lower is better) Translates to: HGVLQKALSSTRTPPTLPYNCTF*AHFLQI Trigger: AATTTGCAAGAAGTGTGCTCAGAATGTACAGTTGTA...AGGTAATGTTGGAGGCGTACGTGTGGAGCTAAGTGCCTTTTGGAGGACCCCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030696.11 ENSMUST00000097856.10 |
||
| CDS-3UTR TCA 90 bp | ACGCCTCCAACATTACCTCAGCATCAAGACTCTAAGGCAATGAGAAAGAAAAGGTGCTCTTTGGTCTTCTaGAGGACACGCTTGTACGAC | + |
|
Preference number: 4 (lower is better) Translates to: TPPTLPQHQDSKAMRKKRCSLVF*RTRLYD Trigger: GTCGTACAAGCGTGTCCTTCAGAAGACCAAAGAGCA...CCTTTTCTTTCTCATTGCCTTAGAGTCTTGATGCTGAGGTAATGTTGGAGGCGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030696.11 ENSMUST00000097856.10 |
||
| CDS-3UTR TCA 90 bp | TTCCATGGGGTCCTCCAAAAGGCACTTAGCTCCACACGTACGCCTCCAACATTATACAACTGTACATTCTaGGCACACTTCTTGCAAATT | + |
|
Preference number: 4 (lower is better) Translates to: FHGVLQKALSSTRTPPTLYNCTF*AHFLQI Trigger: AATTTGCAAGAAGTGTGCTCAGAATGTACAGTTGTA...TAATGTTGGAGGCGTACGTGTGGAGCTAAGTGCCTTTTGGAGGACCCCATGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030696.11 ENSMUST00000097856.10 |
||
| CDS-3UTR TCA 90 bp | ACGCCTCCAACATTACCTCAGCATCAAGACTCTAAGGCAATGAGAAAGAAAAGGACCTCTTCCTTCAGCTaGGCAATGATGACAAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TPPTLPQHQDSKAMRKKRTSSFS*AMMTKW Trigger: CCACTTTGTCATCATTGCTCAGCTGAAGGAAGAGGT...CCTTTTCTTTCTCATTGCCTTAGAGTCTTGATGCTGAGGTAATGTTGGAGGCGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030696.11 ENSMUST00000097856.10 |
||
| CDS-3UTR CCA 90 bp | TTCCATGGGGTCCTCCAAAAGGCACTTAGCTCCACACGTACGCCTCCAACATTAGAATTTGTGCAGCGCTaGCATTTATTCCCAATAAAT | + |
|
Preference number: 4 (lower is better) Translates to: FHGVLQKALSSTRTPPTLEFVQR*HLFPIN Trigger: ATTTATTGGGAATAAATGCCAGCGCTGCACAAATTC...TAATGTTGGAGGCGTACGTGTGGAGCTAAGTGCCTTTTGGAGGACCCCATGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030696.11 ENSMUST00000097856.10 |
||
| CDS-3UTR CCA 90 bp | AGCTTTCCCTGCTTAGAAGGGAAAATTGCACTCCCGACCAGTGTTACAAAAACATCTGTGACCTCCTTGTaGGTTTTCTCCATTTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SFPCLEGKIALPTSVTKTSVTSL*VFSIWF Trigger: GAACCAAATGGAGAAAACCCACAAGGAGGTCACAGA...TGTTTTTGTAACACTGGTCGGGAGTGCAATTTTCCCTTCTAAGCAGGGAAAGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030696.11 |
||
| CDS-3UTR CCA 90 bp | TTTGCTCTGTGTCCCAGCACATACTCCCCATCTCTAGTTCCTTTCCCAAAGATGTCTTGCAAATTGTATTaGTTTTACTCTCCTGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: FALCPSTYSPSLVPFPKMSCKLY*FYSPAG Trigger: ACCAGCAGGAGAGTAAAACCAATACAATTTGCAAGA...CATCTTTGGGAAAGGAACTAGAGATGGGGAGTATGTGCTGGGACACAGAGCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030696.11 |
||
| CDS CCA 90 bp | CACCTCTTCCTTCAGCTGAGCAATGATGACAAAGTGGTCAGTGCCTaGGGAATCCAGAGCCAGGTCTGGAGAAAAGCTGTCTCCGTTAGT | + |
|
Preference number: 5 (lower is better) Translates to: HLFLQLSNDDKVVSA*GIQSQVWRKAVSVS Trigger: ACTAACGGAGACAGCTTTTCTCCAGACCTGGCTCTGGATTCCCCAGGCACTGACCACTTTGTCATCATTGCTCAGCTGAAGGAAGAGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030696.11 |
||
| CDS-3UTR CAA 90 bp | AAGCCTCCCTCACTGCACAGAGTCTCCAGGTGGCAGTTTTCGAGGTTGGGAGCGACTTCTTCTCTGAATTaGTGCAGCGCTGGCATTTAT | + |
|
Preference number: 5 (lower is better) Translates to: KPPSLHRVSRWQFSRLGATSSLN*CSAGIY Trigger: ATAAATGCCAGCGCTGCACAAATTCAGAGAAGAAGT...CGCTCCCAACCTCGAAAACTGCCACCTGGAGACTCTGTGCAGTGAGGGAGGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030696.11 ENSMUST00000097856.10 |
||
| CDS GCA 90 bp | TCCTCTGCTCTTTGGTCTTCTGAAGGACACGCTTGTACGACAGCGTaGACAGCCAGCATAGCAACTTCCCATCCACCTTCTTTCGATCAT | + |
|
Preference number: 5 (lower is better) Translates to: SSALWSSEGHACTTA*TASIATSHPPSFDH Trigger: ATGATCGAAAGAAGGTGGATGGGAAGTTGCTATGCTGGCTGTGCACGCTGTCGTACAAGCGTGTCCTTCAGAAGACCAAAGAGCAGAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030696.11 ENSMUST00000097856.10 ENSMUST00000148667.2 |
||
| CDS CCA 90 bp | CACCTCTTCCTTCAGCTGAGCAATGATGACAAAGTGGTCAGTGCCTaGGGAATCCAGAGCCAGGTCTGGAGAAAAGCTGTTGTAATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: HLFLQLSNDDKVVSA*GIQSQVWRKAVVMA Trigger: AGCCATTACAACAGCTTTTCTCCAGACCTGGCTCTGGATTCCCCAGGCACTGACCACTTTGTCATCATTGCTCAGCTGAAGGAAGAGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097856.10 |
||
| CDS-3UTR CAA 90 bp | CTCCCCATCTCTAGTTCCTTTCCCAAAGATGGAGGGGCGCAGCTCCTTCCCACAACTTCTTCTCTGAATTaGTGCAGCGCTGGCATTTAT | + |
|
Preference number: 5 (lower is better) Translates to: LPISSSFPKDGGAQLLPTTSSLN*CSAGIY Trigger: ATAAATGCCAGCGCTGCACAAATTCAGAGAAGAAGT...TGTGGGAAGGAGCTGCGCCCCTCCATCTTTGGGAAAGGAACTAGAGATGGGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030696.11 |
||
| CDS-3UTR CAA 90 bp | TTCCATGGGGTCCTCCAAAAGGCACTTAGCTCCACACGTACGCCTCCAACATTAGACTTCTCAGACTTCTaGCTCTTGGACAAGGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: FHGVLQKALSSTRTPPTLDFSDF*LLDKAA Trigger: AGCTGCCTTGTCCAAGAGCAAGAAGTCTGAGAAGTC...TAATGTTGGAGGCGTACGTGTGGAGCTAAGTGCCTTTTGGAGGACCCCATGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030696.11 ENSMUST00000097856.10 |
||
| CDS-3UTR CAA 90 bp | AGCATCTTTCTGCCCTACTTAAAGACAGACTGGCCATACTCAGCAACCGTCCTTGTTTTTGGCCTGCAGTaGCTCTGTGACCTCCTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: SIFLPYLKTDWPYSATVLVFGLQ*LCDLLV Trigger: CACAAGGAGGTCACAGAGCAACTGCAGGCCAAAAAC...AAGGACGGTTGCTGAGTATGGCCAGTCTGTCTTTAAGTAGGGCAGAAAGATGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030696.11 ENSMUST00000097856.10 |
||
| CDS-3UTR CAA 90 bp | AAAAGGTTTATTGGTGAGAAAAAGCCTCCCTCACTGCACAGAGTCTCCAGGTGGTCAGACTTCTTGCTCTaGGACAAGGCAGCTGCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: KRFIGEKKPPSLHRVSRWSDFLL*DKAAAC Trigger: ACAGGCAGCTGCCTTGTCCAAGAGCAAGAAGTCTGA...CCACCTGGAGACTCTGTGCAGTGAGGGAGGCTTTTTCTCACCAATAAACCTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030696.11 ENSMUST00000097856.10 |
||
| CDS-3UTR CAA 90 bp | GTATACCCTGAAGCAAAAGGTTTATTGGTGAGAAAAAGCCTCCCTCACTGCACAGTTTTTGGCCTGCAGTaGCTCTGTGACCTCCTTGTG | + |
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Preference number: 5 (lower is better) Translates to: VYPEAKGLLVRKSLPHCTVFGLQ*LCDLLV Trigger: CACAAGGAGGTCACAGAGCAACTGCAGGCCAAAAAC...TGTGCAGTGAGGGAGGCTTTTTCTCACCAATAAACCTTTTGCTTCAGGGTATAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000030696.11 ENSMUST00000097856.10 |
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| CDS-3UTR CAA 90 bp | GGAAAATTGCACTCCCGACCAGTGTTACAAAAACACAGTCCTTCGAATCTCCTGGACTTCTCAGACTTCTaGCTCTTGGACAAGGCAGCT | + |
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Preference number: 5 (lower is better) Translates to: GKLHSRPVLQKHSPSNLLDFSDF*LLDKAA Trigger: AGCTGCCTTGTCCAAGAGCAAGAAGTCTGAGAAGTC...CAGGAGATTCGAAGGACTGTGTTTTTGTAACACTGGTCGGGAGTGCAATTTTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030696.11 |
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| CDS GCA 72 bp | CCAGAGCCAGGTCTGGAGAAAAGCTGTTGTAATGGCTaGCTCCACTCAGGCGGCTGTACTGCTCCTTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: PEPGLEKSCCNG*LHSGGCTAPSP Trigger: AGGAGAAGGAGCAGTACAGCCGCCTGAGTGGAGGCAGCCATTACAACAGCTTTTCTCCAGACCTGGCTCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097856.10 |
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| CDS GCA 72 bp | CTTTGGTCTTCTGAAGGACACGCTTGTACGACAGCGTaGACAGCCAGCATAGCAACTTCCCATCCACCTTCT | + |
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Preference number: 6 (lower is better) Translates to: LWSSEGHACTTA*TASIATSHPPS Trigger: AGAAGGTGGATGGGAAGTTGCTATGCTGGCTGTGCACGCTGTCGTACAAGCGTGTCCTTCAGAAGACCAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030696.11 ENSMUST00000097856.10 ENSMUST00000148667.2 |
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| CDS CCA 72 bp | CTTCAGCTGAGCAATGATGACAAAGTGGTCAGTGCCTaGGGAATCCAGAGCCAGGTCTGGAGAAAAGCTGTT | + |
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Preference number: 6 (lower is better) Translates to: LQLSNDDKVVSA*GIQSQVWRKAV Trigger: AACAGCTTTTCTCCAGACCTGGCTCTGGATTCCCCAGGCACTGACCACTTTGTCATCATTGCTCAGCTGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097856.10 |
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| CDS CAA 72 bp | CAGTTGCTCTGTGACCTCCTTGTGGGTTTTCTCCATTaGGTTCATTTTGGCCCGAGTCTGAGACTCCTGGTA | + |
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Preference number: 6 (lower is better) Translates to: QLLCDLLVGFLH*VHFGPSLRLLV Trigger: TACCAGGAGTCTCAGACTCGGGCCAAAATGAACCAAATGGAGAAAACCCACAAGGAGGTCACAGAGCAACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030696.11 ENSMUST00000097856.10 |
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| CDS TCA 72 bp | TCAGAAGCTCTCGGTTTTTGGCCTGCAGTTGCTCTGTaGCCTCCTTGTGGGTTTTCTCCATTTGGTTCATTT | + |
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Preference number: 6 (lower is better) Translates to: SEALGFWPAVAL*PPCGFSPFGSF Trigger: AAATGAACCAAATGGAGAAAACCCACAAGGAGGTCACAGAGCAACTGCAGGCCAAAAACCGAGAGCTTCTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030696.11 ENSMUST00000097856.10 |
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