Pregenerated sensors for FAM71F2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000079652Ensembl transcript IDs: ENSMUST00000115286.4, ENSMUST00000167608.2
Found 60 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCGCTCGGCTGCCAGCAGCATTATGGCCTCGCTGTTCTGGGAGGATaGAGGCAGGCTGCTTTCAGTTGCTGTTTCAGTGGAGGAGTTGGA | + |
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Preference number: 1 (lower is better) Translates to: PLGCQQHYGLAVLGG*RQAAFSCCFSGGVG Trigger: TCCAACTCCTCCACTGAAACAGCAACTGAAAGCAGCCTGCCTGCATCCTCCCAGAACAGCGAGGCCATAATGCTGCTGGCAGCCGAGCGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167608.2 |
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| 3UTR CCA 90 bp | CTGCTGTTCCGCTCGGCTGCCAGCAGCATTATGGCCTCGCTGTTCTaGGAGGATGCAGGCAGGCTGCTTTCAGTTGCTGTTTCAGTGGAG | + |
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Preference number: 1 (lower is better) Translates to: LLFRSAASSIMASLF*EDAGRLLSVAVSVE Trigger: CTCCACTGAAACAGCAACTGAAAGCAGCCTGCCTGCATCCTCCCAGAACAGCGAGGCCATAATGCTGCTGGCAGCCGAGCGGAACAGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167608.2 |
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| 3UTR CCA 90 bp | GTTCTAAGAGACTGCTGCTGTTCCGCTCGGCTGCCAGCAGCATTATaGCCTCGCTGTTCTGGGAGGATGCAGGCAGGCTGCTTTCAGTTG | + |
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Preference number: 1 (lower is better) Translates to: VLRDCCCSARLPAAL*PRCSGRMQAGCFQL Trigger: CAACTGAAAGCAGCCTGCCTGCATCCTCCCAGAACAGCGAGGCCATAATGCTGCTGGCAGCCGAGCGGAACAGCAGCAGTCTCTTAGAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167608.2 |
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| 3UTR GCA 90 bp | CCAGCAGCATTATGGCCTCGCTGTTCTGGGAGGATGCAGGCAGGCTaGTTTCAGTTGCTGTTTCAGTGGAGGAGTTGGACATCTTGGGCA | + |
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Preference number: 1 (lower is better) Translates to: PAALWPRCSGRMQAG*FQLLFQWRSWTSWA Trigger: TGCCCAAGATGTCCAACTCCTCCACTGAAACAGCAACTGAAAGCAGCCTGCCTGCATCCTCCCAGAACAGCGAGGCCATAATGCTGCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167608.2 |
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| 3UTR CCA 90 bp | CAGCGCAAACACATAGACATAGAAGACAGGGCCAACACCCGACTCTaGCTAGGTATTAGGGTCCCAACAAGTTCTCTCCTAGGGAGCTGG | + |
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Preference number: 1 (lower is better) Translates to: QRKHIDIEDRANTRL*LGIRVPTSSLLGSW Trigger: CCAGCTCCCTAGGAGAGAACTTGTTGGGACCCTAATACCTAGCCAGAGTCGGGTGTTGGCCCTGTCTTCTATGTCTATGTGTTTGCGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167608.2 |
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| 3UTR CCA 90 bp | GGAGCATCTTGGTGTAAGAACCATATCATCGCTCCCATGGTTACTTaGCCCACTGCAGGAAGCAGCATTGTAGGAGGCAGCGCAAACACA | + |
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Preference number: 1 (lower is better) Translates to: GASWCKNHIIAPMVT*PTAGSSIVGGSANT Trigger: TGTGTTTGCGCTGCCTCCTACAATGCTGCTTCCTGCAGTGGGCCAAGTAACCATGGGAGCGATGATATGGTTCTTACACCAAGATGCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115286.4 ENSMUST00000167608.2 |
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| 3UTR CCA 90 bp | CTCTGGCTAGGTATTAGGGTCCCAACAAGTTCTCTCCTAGGGAGCTaGCTACAGGAGCCTGCAGGAAGTTCTCATTTGAGTCCTCTTGTT | + |
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Preference number: 1 (lower is better) Translates to: LWLGIRVPTSSLLGS*LQEPAGSSHLSPLV Trigger: AACAAGAGGACTCAAATGAGAACTTCCTGCAGGCTCCTGTAGCCAGCTCCCTAGGAGAGAACTTGTTGGGACCCTAATACCTAGCCAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167608.2 |
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| 3UTR CCA 90 bp | TTGTCTGTTTCTGTGGCAGTATCAGTGTGCCTGTCTCTTGAGGTCTaGTGTCTGTTTGAGAGTTCTAAGAGACTGCTGCTGTTCCGCTCG | + |
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Preference number: 1 (lower is better) Translates to: LSVSVAVSVCLSLEV*CLFESSKRLLLFRS Trigger: CGAGCGGAACAGCAGCAGTCTCTTAGAACTCTCAAACAGACACCAGACCTCAAGAGACAGGCACACTGATACTGCCACAGAAACAGACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167608.2 |
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| 3UTR CAA 90 bp | CTGTGGCAGTATCAGTGTGCCTGTCTCTTGAGGTCTGGTGTCTGTTaGAGAGTTCTAAGAGACTGCTGCTGTTCCGCTCGGCTGCCAGCA | + |
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Preference number: 2 (lower is better) Translates to: LWQYQCACLLRSGVC*RVLRDCCCSARLPA Trigger: TGCTGGCAGCCGAGCGGAACAGCAGCAGTCTCTTAGAACTCTCAAACAGACACCAGACCTCAAGAGACAGGCACACTGATACTGCCACAG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167608.2 |
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| 3UTR-3UTR TCA 90 bp | TCCCATGGTTACTTGGCCCACTGCAGGAAGCAGCATTGTAGGAGGCAGCGCAAAGCACCAGGCAGTGAGTaGACTGGATTCTTGGGTCTT | + |
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Preference number: 2 (lower is better) Translates to: SHGYLAHCRKQHCRRQRKAPGSE*TGFLGL Trigger: AAGACCCAAGAATCCAGTTCACTCACTGCCTGGTGC...TTTGCGCTGCCTCCTACAATGCTGCTTCCTGCAGTGGGCCAAGTAACCATGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167608.2 |
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| 3UTR CAA 90 bp | TCTCTCCTAGGGAGCTGGCTACAGGAGCCTGCAGGAAGTTCTCATTaGAGTCCTCTTGTTCCCAGAGACTGTGGGTCAAAGCAGCTCTCA | + |
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Preference number: 2 (lower is better) Translates to: SLLGSWLQEPAGSSH*SPLVPRDCGSKQLS Trigger: TGAGAGCTGCTTTGACCCACAGTCTCTGGGAACAAGAGGACTCAAATGAGAACTTCCTGCAGGCTCCTGTAGCCAGCTCCCTAGGAGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167608.2 |
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| 3UTR-3UTR CCA 90 bp | CCCATGGTTACTTGGCCCACTGCAGGAAGCAGCATTGTAGGAGGCAGCGCAAACAGTTGTCTGTTTCTGTaGCAGTATCAGTGTGCCTGT | + |
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Preference number: 2 (lower is better) Translates to: PMVTWPTAGSSIVGGSANSCLFL*QYQCAC Trigger: ACAGGCACACTGATACTGCCACAGAAACAGACAACT...GTTTGCGCTGCCTCCTACAATGCTGCTTCCTGCAGTGGGCCAAGTAACCATGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167608.2 |
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| 3UTR-3UTR TCA 90 bp | ACAAGTTCTCTCCTAGGGAGCTGGCTACAGGAGCCTGCAGGAAGTTCTCATTTGAACCGGATCCAGAACTaGAACACAGCCTGTGGATGT | + |
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Preference number: 2 (lower is better) Translates to: TSSLLGSWLQEPAGSSHLNRIQN*NTACGC Trigger: ACATCCACAGGCTGTGTTTCAGTTCTGGATCCGGTT...CAAATGAGAACTTCCTGCAGGCTCCTGTAGCCAGCTCCCTAGGAGAGAACTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167608.2 |
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| 3UTR-3UTR GCA 90 bp | ATGGTTACTTGGCCCACTGCAGGAAGCAGCATTGTAGGAGGCAGCGCAAACACACAGGCTGCTTTCAGTTaGTGTTTCAGTGGAGGAGTT | + |
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Preference number: 2 (lower is better) Translates to: MVTWPTAGSSIVGGSANTQAAFS*CFSGGV Trigger: AACTCCTCCACTGAAACAGCAACTGAAAGCAGCCTG...TGTGTTTGCGCTGCCTCCTACAATGCTGCTTCCTGCAGTGGGCCAAGTAACCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167608.2 |
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| 3UTR CAA 90 bp | TGCCGGAGTTGTCTGTTTCTGTGGCAGTATCAGTGTGCCTGTCTCTaGAGGTCTGGTGTCTGTTTGAGAGTTCTAAGAGACTGCTGCTGT | + |
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Preference number: 2 (lower is better) Translates to: CRSCLFLWQYQCACL*RSGVCLRVLRDCCC Trigger: ACAGCAGCAGTCTCTTAGAACTCTCAAACAGACACCAGACCTCAAGAGACAGGCACACTGATACTGCCACAGAAACAGACAACTCCGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167608.2 |
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| 3UTR CCA 72 bp | CGCTCGGCTGCCAGCAGCATTATGGCCTCGCTGTTCTaGGAGGATGCAGGCAGGCTGCTTTCAGTTGCTGTT | + |
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Preference number: 3 (lower is better) Translates to: RSAASSIMASLF*EDAGRLLSVAV Trigger: AACAGCAACTGAAAGCAGCCTGCCTGCATCCTCCCAGAACAGCGAGGCCATAATGCTGCTGGCAGCCGAGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167608.2 |
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| 3UTR-3UTR CAA 90 bp | CTTGAGGTCTGGTGTCTGTTTGAGAGTTCTAAGAGACTGCTGCTGTTCCGCTCGCGCTCCCATGGTTACTaGGCCCACTGCAGGAAGCAG | + |
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Preference number: 3 (lower is better) Translates to: LEVWCLFESSKRLLLFRSRSHGY*AHCRKQ Trigger: CTGCTTCCTGCAGTGGGCCAAGTAACCATGGGAGCG...CGAGCGGAACAGCAGCAGTCTCTTAGAACTCTCAAACAGACACCAGACCTCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167608.2 |
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| 3UTR GCA 72 bp | TGCCAGCAGCATTATGGCCTCGCTGTTCTGGGAGGATaGAGGCAGGCTGCTTTCAGTTGCTGTTTCAGTGGA | + |
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Preference number: 3 (lower is better) Translates to: CQQHYGLAVLGG*RQAAFSCCFSG Trigger: TCCACTGAAACAGCAACTGAAAGCAGCCTGCCTGCATCCTCCCAGAACAGCGAGGCCATAATGCTGCTGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167608.2 |
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| 3UTR TCA 72 bp | GGAGCTGGCTACAGGAGCCTGCAGGAAGTTCTCATTTaGGTCCTCTTGTTCCCAGAGACTGTGGGTCAAAGC | + |
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Preference number: 3 (lower is better) Translates to: GAGYRSLQEVLI*VLLFPETVGQS Trigger: GCTTTGACCCACAGTCTCTGGGAACAAGAGGACTCAAATGAGAACTTCCTGCAGGCTCCTGTAGCCAGCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167608.2 |
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| 3UTR GCA 72 bp | AGGTCTGGTGTCTGTTTGAGAGTTCTAAGAGACTGCTaGTGTTCCGCTCGGCTGCCAGCAGCATTATGGCCT | + |
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Preference number: 3 (lower is better) Translates to: RSGVCLRVLRDC*CSARLPAALWP Trigger: AGGCCATAATGCTGCTGGCAGCCGAGCGGAACAGCAGCAGTCTCTTAGAACTCTCAAACAGACACCAGACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167608.2 |
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| 3UTR CCA 72 bp | GGGTTGACTTGCAGTTGCCGGAGTTGTCTGTTTCTGTaGCAGTATCAGTGTGCCTGTCTCTTGAGGTCTGGT | + |
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Preference number: 3 (lower is better) Translates to: GLTCSCRSCLFL*QYQCACLLRSG Trigger: ACCAGACCTCAAGAGACAGGCACACTGATACTGCCACAGAAACAGACAACTCCGGCAACTGCAAGTCAACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167608.2 |
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| 3UTR CCA 72 bp | GGTATTAGGGTCCCAACAAGTTCTCTCCTAGGGAGCTaGCTACAGGAGCCTGCAGGAAGTTCTCATTTGAGT | + |
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Preference number: 3 (lower is better) Translates to: GIRVPTSSLLGS*LQEPAGSSHLS Trigger: ACTCAAATGAGAACTTCCTGCAGGCTCCTGTAGCCAGCTCCCTAGGAGAGAACTTGTTGGGACCCTAATACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167608.2 |
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| 3UTR CCA 72 bp | CACATAGACATAGAAGACAGGGCCAACACCCGACTCTaGCTAGGTATTAGGGTCCCAACAAGTTCTCTCCTA | + |
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Preference number: 3 (lower is better) Translates to: HIDIEDRANTRL*LGIRVPTSSLL Trigger: TAGGAGAGAACTTGTTGGGACCCTAATACCTAGCCAGAGTCGGGTGTTGGCCCTGTCTTCTATGTCTATGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167608.2 |
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| 3UTR CCA 72 bp | CATTGGAGGTTTATTGGTGGAAGTAGAGGAGCATCTTaGTGTAAGAACCATATCATCGCTCCCATGGTTACT | + |
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Preference number: 3 (lower is better) Translates to: HWRFIGGSRGAS*CKNHIIAPMVT Trigger: AGTAACCATGGGAGCGATGATATGGTTCTTACACCAAGATGCTCCTCTACTTCCACCAATAAACCTCCAATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115286.4 |
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| CDS-3UTR TCA 90 bp | GCTCCCATGGTTACTTGGCCCACTGCAGGAAGCAGCATTGTAGGAGGCAGCGCAGACCGTGAGGCCAGGTaGCATTGGCCATCAGGAGGA | + |
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Preference number: 4 (lower is better) Translates to: APMVTWPTAGSSIVGGSADREAR*HWPSGG Trigger: TCCTCCTGATGGCCAATGTCACCTGGCCTCACGGTC...TGCGCTGCCTCCTACAATGCTGCTTCCTGCAGTGGGCCAAGTAACCATGGGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115286.4 |
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| CDS-3UTR CCA 90 bp | CCCATGGTTACTTGGCCCACTGCAGGAAGCAGCATTGTAGGAGGCAGCGCAAACTTCCACTCCAGGGCCTaGGTCCCTGATTGCAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: PMVTWPTAGSSIVGGSANFHSRA*VPDCRR Trigger: CCTCCTGCAATCAGGGACCCAGGCCCTGGAGTGGAA...GTTTGCGCTGCCTCCTACAATGCTGCTTCCTGCAGTGGGCCAAGTAACCATGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115286.4 ENSMUST00000167608.2 |
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| CDS-3UTR CCA 90 bp | TCCCATGGTTACTTGGCCCACTGCAGGAAGCAGCATTGTAGGAGGCAGCGCAAAATGGCCTCGCTGTTCTaGGAGGATGCAGGCAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: SHGYLAHCRKQHCRRQRKMASLF*EDAGRL Trigger: CAGCCTGCCTGCATCCTCCCAGAACAGCGAGGCCAT...TTTGCGCTGCCTCCTACAATGCTGCTTCCTGCAGTGGGCCAAGTAACCATGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115286.4 |
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| CDS-3UTR GCA 90 bp | CGCTCCCATGGTTACTTGGCCCACTGCAGGAAGCAGCATTGTAGGAGGCAGCGCCTGGCTACAGGAGCCTaGAGGAAGTTCTCATTTGAG | + |
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Preference number: 4 (lower is better) Translates to: RSHGYLAHCRKQHCRRQRLATGA*RKFSFE Trigger: CTCAAATGAGAACTTCCTGCAGGCTCCTGTAGCCAG...GCGCTGCCTCCTACAATGCTGCTTCCTGCAGTGGGCCAAGTAACCATGGGAGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115286.4 |
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| CDS-3UTR CCA 90 bp | ATGGTTACTTGGCCCACTGCAGGAAGCAGCATTGTAGGAGGCAGCGCAAACACATTCCACTCCAGGGCCTaGGTCCCTGATTGCAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: MVTWPTAGSSIVGGSANTFHSRA*VPDCRR Trigger: CCTCCTGCAATCAGGGACCCAGGCCCTGGAGTGGAA...TGTGTTTGCGCTGCCTCCTACAATGCTGCTTCCTGCAGTGGGCCAAGTAACCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115286.4 ENSMUST00000167608.2 |
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| CDS-3UTR CCA 90 bp | CGCTCCCATGGTTACTTGGCCCACTGCAGGAAGCAGCATTGTAGGAGGCAGCGCCAGTTGCTGTTTCAGTaGAGGAGTTGGACATCTTGG | + |
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Preference number: 4 (lower is better) Translates to: RSHGYLAHCRKQHCRRQRQLLFQ*RSWTSW Trigger: CCAAGATGTCCAACTCCTCCACTGAAACAGCAACTG...GCGCTGCCTCCTACAATGCTGCTTCCTGCAGTGGGCCAAGTAACCATGGGAGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115286.4 |
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| CDS-3UTR CCA 90 bp | CCCATGGTTACTTGGCCCACTGCAGGAAGCAGCATTGTAGGAGGCAGCGCAAACCTGAAACACAGCCTGTaGATGTTTCTCGTGGAGCCT | + |
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Preference number: 4 (lower is better) Translates to: PMVTWPTAGSSIVGGSANLKHSL*MFLVEP Trigger: AGGCTCCACGAGAAACATCCACAGGCTGTGTTTCAG...GTTTGCGCTGCCTCCTACAATGCTGCTTCCTGCAGTGGGCCAAGTAACCATGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115286.4 |
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| 3UTR CAA 72 bp | GATGCCACCAGTGGGGTTGACTTGCAGTTGCCGGAGTaGTCTGTTTCTGTGGCAGTATCAGTGTGCCTGTCT | + |
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Preference number: 4 (lower is better) Translates to: DATSGVDLQLPE*SVSVAVSVCLS Trigger: AGACAGGCACACTGATACTGCCACAGAAACAGACAACTCCGGCAACTGCAAGTCAACCCCACTGGTGGCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167608.2 |
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| 3UTR CAA 72 bp | GGGAGCTGGCTACAGGAGCCTGCAGGAAGTTCTCATTaGAGTCCTCTTGTTCCCAGAGACTGTGGGTCAAAG | + |
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Preference number: 4 (lower is better) Translates to: GSWLQEPAGSSH*SPLVPRDCGSK Trigger: CTTTGACCCACAGTCTCTGGGAACAAGAGGACTCAAATGAGAACTTCCTGCAGGCTCCTGTAGCCAGCTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167608.2 |
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| CDS-3UTR CCA 90 bp | CATGGTTACTTGGCCCACTGCAGGAAGCAGCATTGTAGGAGGCAGCGCAAACACTCAGGGGGAGAATCCTaGATAAAGGTGCTCTCAAAC | + |
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Preference number: 4 (lower is better) Translates to: HGYLAHCRKQHCRRQRKHSGGES*IKVLSN Trigger: GTTTGAGAGCACCTTTATCCAGGATTCTCCCCCTGA...GTGTTTGCGCTGCCTCCTACAATGCTGCTTCCTGCAGTGGGCCAAGTAACCATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167608.2 |
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| CDS-3UTR CCA 90 bp | TCCCATGGTTACTTGGCCCACTGCAGGAAGCAGCATTGTAGGAGGCAGCGCAAACCTTGCTTAGTGACCTaGATAAAGGTGCTCTCAAAC | + |
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Preference number: 4 (lower is better) Translates to: SHGYLAHCRKQHCRRQRKPCLVT*IKVLSN Trigger: GTTTGAGAGCACCTTTATCCAGGTCACTAAGCAAGG...TTTGCGCTGCCTCCTACAATGCTGCTTCCTGCAGTGGGCCAAGTAACCATGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115286.4 |
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| CDS-3UTR CCA 90 bp | TTGGTGGAAGTAGAGGAGCATCTTGGTGTAAGAACCATATCATCGCTCCCATGGCCATCAGGAGGATATTaGGGAGTGGCAAGGAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: LVEVEEHLGVRTISSLPWPSGGY*GVARRA Trigger: TGCCCTCCTTGCCACTCCCCAATATCCTCCTGATGG...CCATGGGAGCGATGATATGGTTCTTACACCAAGATGCTCCTCTACTTCCACCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115286.4 |
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| CDS-3UTR CCA 90 bp | CATGGTTACTTGGCCCACTGCAGGAAGCAGCATTGTAGGAGGCAGCGCAAACACAGTGAACTGGATTCTTaGGTCTTTGGTGGTGATGGA | + |
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Preference number: 4 (lower is better) Translates to: HGYLAHCRKQHCRRQRKHSELDS*VFGGDG Trigger: TCCATCACCACCAAAGACCCAAGAATCCAGTTCACT...GTGTTTGCGCTGCCTCCTACAATGCTGCTTCCTGCAGTGGGCCAAGTAACCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115286.4 |
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| 3UTR CAA 72 bp | TATCAGTGTGCCTGTCTCTTGAGGTCTGGTGTCTGTTaGAGAGTTCTAAGAGACTGCTGCTGTTCCGCTCGG | + |
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Preference number: 4 (lower is better) Translates to: YQCACLLRSGVC*RVLRDCCCSAR Trigger: CCGAGCGGAACAGCAGCAGTCTCTTAGAACTCTCAAACAGACACCAGACCTCAAGAGACAGGCACACTGATA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167608.2 |
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| CDS-3UTR GCA 90 bp | TTGGTGGAAGTAGAGGAGCATCTTGGTGTAAGAACCATATCATCGCTCCCATGGGGGTTGACTTGCAGTTaGCGGAGTTGTCTGTTTCTG | + |
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Preference number: 4 (lower is better) Translates to: LVEVEEHLGVRTISSLPWGLTCS*RSCLFL Trigger: CAGAAACAGACAACTCCGGCAACTGCAAGTCAACCC...CCATGGGAGCGATGATATGGTTCTTACACCAAGATGCTCCTCTACTTCCACCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115286.4 |
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| CDS-3UTR CCA 90 bp | TGGAGGTTTATTGGTGGAAGTAGAGGAGCATCTTGGTGTAAGAACCATATCATCTCTCTCCTAGGGAGCTaGCTACAGGAGCCTGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: WRFIGGSRGASWCKNHIISLLGS*LQEPAG Trigger: TCCTGCAGGCTCCTGTAGCCAGCTCCCTAGGAGAGA...GATGATATGGTTCTTACACCAAGATGCTCCTCTACTTCCACCAATAAACCTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115286.4 |
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| CDS-3UTR TCA 90 bp | AGGTTTATTGGTGGAAGTAGAGGAGCATCTTGGTGTAAGAACCATATCATCGCTGCACCAGGCAGTGAGTaGACTGGATTCTTGGGTCTT | + |
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Preference number: 4 (lower is better) Translates to: RFIGGSRGASWCKNHIIAAPGSE*TGFLGL Trigger: AAGACCCAAGAATCCAGTTCACTCACTGCCTGGTGC...AGCGATGATATGGTTCTTACACCAAGATGCTCCTCTACTTCCACCAATAAACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115286.4 |
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| CDS-3UTR GCA 90 bp | GTGGAAGTAGAGGAGCATCTTGGTGTAAGAACCATATCATCGCTCCCATGGTTACAGGCTGCTTTCAGTTaGTGTTTCAGTGGAGGAGTT | + |
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Preference number: 4 (lower is better) Translates to: VEVEEHLGVRTISSLPWLQAAFS*CFSGGV Trigger: AACTCCTCCACTGAAACAGCAACTGAAAGCAGCCTG...TAACCATGGGAGCGATGATATGGTTCTTACACCAAGATGCTCCTCTACTTCCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115286.4 |
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| CDS-3UTR CCA 90 bp | TTGGTGGAAGTAGAGGAGCATCTTGGTGTAAGAACCATATCATCGCTCCCATGGAGTTGTCTGTTTCTGTaGCAGTATCAGTGTGCCTGT | + |
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Preference number: 4 (lower is better) Translates to: LVEVEEHLGVRTISSLPWSCLFL*QYQCAC Trigger: ACAGGCACACTGATACTGCCACAGAAACAGACAACT...CCATGGGAGCGATGATATGGTTCTTACACCAAGATGCTCCTCTACTTCCACCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115286.4 |
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| 3UTR CAA 72 bp | TGTCTGTTTCTGTGGCAGTATCAGTGTGCCTGTCTCTaGAGGTCTGGTGTCTGTTTGAGAGTTCTAAGAGAC | + |
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Preference number: 4 (lower is better) Translates to: CLFLWQYQCACL*RSGVCLRVLRD Trigger: GTCTCTTAGAACTCTCAAACAGACACCAGACCTCAAGAGACAGGCACACTGATACTGCCACAGAAACAGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167608.2 |
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| CDS-3UTR TCA 90 bp | TGGAGGTTTATTGGTGGAAGTAGAGGAGCATCTTGGTGTAAGAACCATATCATCAACCGGATCCAGAACTaGAACACAGCCTGTGGATGT | + |
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Preference number: 4 (lower is better) Translates to: WRFIGGSRGASWCKNHIINRIQN*NTACGC Trigger: ACATCCACAGGCTGTGTTTCAGTTCTGGATCCGGTT...GATGATATGGTTCTTACACCAAGATGCTCCTCTACTTCCACCAATAAACCTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115286.4 |
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| CDS-3UTR CCA 90 bp | GTGGAAGTAGAGGAGCATCTTGGTGTAAGAACCATATCATCGCTCCCATGGTTACTGTCTCTTGAGGTCTaGTGTCTGTTTGAGAGTTCT | + |
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Preference number: 4 (lower is better) Translates to: VEVEEHLGVRTISSLPWLLSLEV*CLFESS Trigger: AGAACTCTCAAACAGACACCAGACCTCAAGAGACAG...TAACCATGGGAGCGATGATATGGTTCTTACACCAAGATGCTCCTCTACTTCCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115286.4 |
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| CDS-3UTR CCA 90 bp | TCCATTGGAGGTTTATTGGTGGAAGTAGAGGAGCATCTTGGTGTAAGAACCATATGTTCCCAGAGACTGTaGGTCAAAGCAGCTCTCATG | + |
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Preference number: 4 (lower is better) Translates to: SIGGLLVEVEEHLGVRTICSQRL*VKAALM Trigger: CATGAGAGCTGCTTTGACCCACAGTCTCTGGGAACA...TATGGTTCTTACACCAAGATGCTCCTCTACTTCCACCAATAAACCTCCAATGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115286.4 |
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| CDS-3UTR TCA 90 bp | TCCATTGGAGGTTTATTGGTGGAAGTAGAGGAGCATCTTGGTGTAAGAACCATACAGGAAGTTCTCATTTaGGTCCTCTTGTTCCCAGAG | + |
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Preference number: 4 (lower is better) Translates to: SIGGLLVEVEEHLGVRTIQEVLI*VLLFPE Trigger: CTCTGGGAACAAGAGGACTCAAATGAGAACTTCCTG...TATGGTTCTTACACCAAGATGCTCCTCTACTTCCACCAATAAACCTCCAATGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115286.4 |
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| CDS-3UTR CCA 90 bp | TTTCACCAACCGGATCCAGAACTGAAACACAGCCTGTGGATGTTTCTCGTGGAGGAACAAGTTGAATTCTaGAGAATGAATCAGTTGACA | + |
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Preference number: 4 (lower is better) Translates to: FHQPDPELKHSLWMFLVEEQVEF*RMNQLT Trigger: TGTCAACTGATTCATTCTCCAGAATTCAACTTGTTC...CTCCACGAGAAACATCCACAGGCTGTGTTTCAGTTCTGGATCCGGTTGGTGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167608.2 |
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| CDS-3UTR CCA 90 bp | TGGAGGTTTATTGGTGGAAGTAGAGGAGCATCTTGGTGTAAGAACCATATCATCGAACAAGTTGAATTCTaGAGAATGAATCAGTTGACA | + |
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Preference number: 4 (lower is better) Translates to: WRFIGGSRGASWCKNHIIEQVEF*RMNQLT Trigger: TGTCAACTGATTCATTCTCCAGAATTCAACTTGTTC...GATGATATGGTTCTTACACCAAGATGCTCCTCTACTTCCACCAATAAACCTCCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115286.4 ENSMUST00000167608.2 |
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| CDS-3UTR CAA 90 bp | CGCTCCCATGGTTACTTGGCCCACTGCAGGAAGCAGCATTGTAGGAGGCAGCGCGCCATCAGGAGGATATaGGGGAGTGGCAAGGAGGGC | + |
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Preference number: 5 (lower is better) Translates to: RSHGYLAHCRKQHCRRQRAIRRI*GSGKEG Trigger: GCCCTCCTTGCCACTCCCCAATATCCTCCTGATGGC...GCGCTGCCTCCTACAATGCTGCTTCCTGCAGTGGGCCAAGTAACCATGGGAGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115286.4 |
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| CDS-3UTR CAA 90 bp | CATGGTTACTTGGCCCACTGCAGGAAGCAGCATTGTAGGAGGCAGCGCAAACACGTTTCAGTGGAGGAGTaGGACATCTTGGGCACCAGG | + |
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Preference number: 5 (lower is better) Translates to: HGYLAHCRKQHCRRQRKHVSVEE*DILGTR Trigger: CCTGGTGCCCAAGATGTCCAACTCCTCCACTGAAAC...GTGTTTGCGCTGCCTCCTACAATGCTGCTTCCTGCAGTGGGCCAAGTAACCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115286.4 |
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| CDS-3UTR CAA 90 bp | CATCGCTCCCATGGTTACTTGGCCCACTGCAGGAAGCAGCATTGTAGGAGGCAGTGGAGAATGAATCAGTaGACAAAGCAGGCCATCCAC | + |
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Preference number: 5 (lower is better) Translates to: HRSHGYLAHCRKQHCRRQWRMNQ*TKQAIH Trigger: GTGGATGGCCTGCTTTGTCAACTGATTCATTCTCCA...CTGCCTCCTACAATGCTGCTTCCTGCAGTGGGCCAAGTAACCATGGGAGCGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115286.4 ENSMUST00000167608.2 |
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| CDS-3UTR CAA 90 bp | CGCTCCCATGGTTACTTGGCCCACTGCAGGAAGCAGCATTGTAGGAGGCAGCGCATCCATCCAGTTTCCTaGCTTAGTGACCTGGATAAA | + |
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Preference number: 5 (lower is better) Translates to: RSHGYLAHCRKQHCRRQRIHPVS*LSDLDK Trigger: TTTATCCAGGTCACTAAGCAAGGAAACTGGATGGAT...GCGCTGCCTCCTACAATGCTGCTTCCTGCAGTGGGCCAAGTAACCATGGGAGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115286.4 |
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| CDS-3UTR CAA 90 bp | GGTTACTTGGCCCACTGCAGGAAGCAGCATTGTAGGAGGCAGCGCAAACACATACAGTGTGCCTGTCTCTaGAGGTCTGGTGTCTGTTTG | + |
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Preference number: 5 (lower is better) Translates to: GYLAHCRKQHCRRQRKHIQCACL*RSGVCL Trigger: CAAACAGACACCAGACCTCAAGAGACAGGCACACTG...TATGTGTTTGCGCTGCCTCCTACAATGCTGCTTCCTGCAGTGGGCCAAGTAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115286.4 |
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| CDS-3UTR CAA 90 bp | GGTTACTTGGCCCACTGCAGGAAGCAGCATTGTAGGAGGCAGCGCAAACACATATTGCAGTTGCCGGAGTaGTCTGTTTCTGTGGCAGTA | + |
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Preference number: 5 (lower is better) Translates to: GYLAHCRKQHCRRQRKHILQLPE*SVSVAV Trigger: TACTGCCACAGAAACAGACAACTCCGGCAACTGCAA...TATGTGTTTGCGCTGCCTCCTACAATGCTGCTTCCTGCAGTGGGCCAAGTAACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115286.4 |
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| CDS-3UTR CAA 90 bp | TACTTGGCCCACTGCAGGAAGCAGCATTGTAGGAGGCAGCGCAAACACATAGACTGGAGAATGAATCAGTaGACAAAGCAGGCCATCCAC | + |
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Preference number: 5 (lower is better) Translates to: YLAHCRKQHCRRQRKHIDWRMNQ*TKQAIH Trigger: GTGGATGGCCTGCTTTGTCAACTGATTCATTCTCCA...GTCTATGTGTTTGCGCTGCCTCCTACAATGCTGCTTCCTGCAGTGGGCCAAGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115286.4 ENSMUST00000167608.2 |
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| CDS-3UTR CAA 90 bp | CATTGGAGGTTTATTGGTGGAAGTAGAGGAGCATCTTGGTGTAAGAACCATATCGCAGGCTGCTTTCAGTaGCTGTTTCAGTGGAGGAGT | + |
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Preference number: 5 (lower is better) Translates to: HWRFIGGSRGASWCKNHIAGCFQ*LFQWRS Trigger: ACTCCTCCACTGAAACAGCAACTGAAAGCAGCCTGC...GATATGGTTCTTACACCAAGATGCTCCTCTACTTCCACCAATAAACCTCCAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115286.4 |
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| CDS-3UTR CAA 90 bp | CATTGGAGGTTTATTGGTGGAAGTAGAGGAGCATCTTGGTGTAAGAACCATATCCGTCCGGTCATAGATTaGCAGCTCCACATACTTCAG | + |
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Preference number: 5 (lower is better) Translates to: HWRFIGGSRGASWCKNHIRPVID*QLHILQ Trigger: CTGAAGTATGTGGAGCTGCAAATCTATGACCGGACG...GATATGGTTCTTACACCAAGATGCTCCTCTACTTCCACCAATAAACCTCCAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115286.4 |
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| CDS CCA 72 bp | CAGGCCATCCACTACTCCGAGTTCCACTCCAGGGCCTaGGTCCCTGATTGCAGGAGGGAGGCCCCTAATTTT | + |
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Preference number: 6 (lower is better) Translates to: QAIHYSEFHSRA*VPDCRREAPNF Trigger: AAAATTAGGGGCCTCCCTCCTGCAATCAGGGACCCAGGCCCTGGAGTGGAACTCGGAGTAGTGGATGGCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115286.4 ENSMUST00000167608.2 |
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