Pregenerated sensors for FAM71F1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039742Ensembl transcript IDs: ENSMUST00000090487.12, ENSMUST00000163229.2, ENSMUST00000164560.8, ENSMUST00000166462.2
Found 99 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTCCAACTCCCTCCACCAGCTTCCGTGTTCCTGCTCCTCCGGGCTTaGTTTCCCTCGCCGCATAGCATCGCTCTTCTCCAGGCTCCAGAC | + |
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Preference number: 1 (lower is better) Translates to: LQLPPPASVFLLLRA*FPSPHSIALLQAPD Trigger: GTCTGGAGCCTGGAGAAGAGCGATGCTATGCGGCGAGGGAAAGCAAGCCCGGAGGAGCAGGAACACGGAAGCTGGTGGAGGGAGTTGGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090487.12 |
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| 3UTR TCA 90 bp | AGATCTGGGAGAGGGTCTCGCTCTCCCCCTGGGCCATCAGATGTGTaGGGCTCTCACTGGGCTGGAGGCCTTTCGATTTCTTCTGCACTA | + |
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Preference number: 1 (lower is better) Translates to: RSGRGSRSPPGPSDV*GSHWAGGLSISSAL Trigger: TAGTGCAGAAGAAATCGAAAGGCCTCCAGCCCAGTGAGAGCCTCACACATCTGATGGCCCAGGGGGAGAGCGAGACCCTCTCCCAGATCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163229.2 |
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| 3UTR TCA 90 bp | ATGCTTGGCGCTCTGGATGGTCTGTTCCATGTCTGGCTCTGCCCCTaGTGCCATTTGACTCTGGCCATAAGGAGGATGTTCGGAAGGGGA | + |
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Preference number: 1 (lower is better) Translates to: MLGALDGLFHVWLCP*CHLTLAIRRMFGRG Trigger: TCCCCTTCCGAACATCCTCCTTATGGCCAGAGTCAAATGGCATCAGGGGCAGAGCCAGACATGGAACAGACCATCCAGAGCGCCAAGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163229.2 |
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| 3UTR CCA 90 bp | GTGACTGTCCTCAACCGCAGGACGCGTTCCTGGTCGTCCCAGATCTaGAGCTCCACAAACTTCAAAGGGAGAATGCTCTTCAGGTTGATG | + |
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Preference number: 1 (lower is better) Translates to: VTVLNRRTRSWSSQI*SSTNFKGRMLFRLM Trigger: CATCAACCTGAAGAGCATTCTCCCTTTGAAGTTTGTGGAGCTCCAGATCTGGGACGACCAGGAACGCGTCCTGCGGTTGAGGACAGTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163229.2 |
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| 3UTR TCA 90 bp | TTGATGTGCATCTTTTCGCTCCTGCTGGAACTGTACTGTTTCTGCTaGTGCAAGTCGGAAAAGATCTGGGAGAGGGTCTCGCTCTCCCCC | + |
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Preference number: 1 (lower is better) Translates to: LMCIFSLLLELYCFC*CKSEKIWERVSLSP Trigger: GGGGGAGAGCGAGACCCTCTCCCAGATCTTTTCCGACTTGCATCAGCAGAAACAGTACAGTTCCAGCAGGAGCGAAAAGATGCACATCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163229.2 |
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| 3UTR TCA 90 bp | ATCACAGGTACAGGGGATGCTGTCTTCACAGGGAGTAGCTTTCTCTaGGCTGGTCTTGTTGATGTGCATCTTTTCGCTCCTGCTGGAACT | + |
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Preference number: 1 (lower is better) Translates to: ITGTGDAVFTGSSFL*AGLVDVHLFAPAGT Trigger: AGTTCCAGCAGGAGCGAAAAGATGCACATCAACAAGACCAGCTCAGAGAAAGCTACTCCCTGTGAAGACAGCATCCCCTGTACCTGTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163229.2 |
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| 3UTR CCA 90 bp | ATGCTGAAGAGAAGTGCTGGTGCGGGCTGCATAAACTCTCCCCAATaGGAAAGGAAGCATCATATAGAGTTTCCTCCAGTTAGGGACAGC | + |
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Preference number: 1 (lower is better) Translates to: MLKRSAGAGCINSPQ*ERKHHIEFPPVRDS Trigger: GCTGTCCCTAACTGGAGGAAACTCTATATGATGCTTCCTTTCCCATTGGGGAGAGTTTATGCAGCCCGCACCAGCACTTCTCTTCAGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163229.2 |
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| 3UTR-3UTR TCA 90 bp | TCCTCCGGGCTTGCTTTCCCTCGCCGCATAGCATCGCTCTTCTCCAGGCTCCAGCCAGAAACTGAATGCTaGAGAGAAGTGCTGGTGCGG | + |
|
Preference number: 2 (lower is better) Translates to: SSGLAFPRRIASLFSRLQPETEC*REVLVR Trigger: CCGCACCAGCACTTCTCTTCAGCATTCAGTTTCTGG...CTGGAGCCTGGAGAAGAGCGATGCTATGCGGCGAGGGAAAGCAAGCCCGGAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090487.12 ENSMUST00000163229.2 ENSMUST00000164560.8 ENSMUST00000166462.2 |
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| 3UTR-3UTR TCA 90 bp | TCCTGCTCCTCCGGGCTTGCTTTCCCTCGCCGCATAGCATCGCTCTTCTCCAGGCCAGAAACTGAATGCTaGAGAGAAGTGCTGGTGCGG | + |
|
Preference number: 2 (lower is better) Translates to: SCSSGLAFPRRIASLFSRPETEC*REVLVR Trigger: CCGCACCAGCACTTCTCTTCAGCATTCAGTTTCTGG...CCTGGAGAAGAGCGATGCTATGCGGCGAGGGAAAGCAAGCCCGGAGGAGCAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090487.12 ENSMUST00000163229.2 ENSMUST00000164560.8 ENSMUST00000166462.2 |
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| 3UTR-3UTR TCA 90 bp | TCAACCGCAGGACGCGTTCCTGGTCGTCCCAGATCTGGAGCTCCACAAACTTCAGTCTGGCTCTGCCCCTaGTGCCATTTGACTCTGGCC | + |
|
Preference number: 2 (lower is better) Translates to: STAGRVPGRPRSGAPQTSVWLCP*CHLTLA Trigger: GGCCAGAGTCAAATGGCATCAGGGGCAGAGCCAGAC...TGAAGTTTGTGGAGCTCCAGATCTGGGACGACCAGGAACGCGTCCTGCGGTTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163229.2 |
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| 3UTR-3UTR GCA 90 bp | TCCTCCGGGCTTGCTTTCCCTCGCCGCATAGCATCGCTCTTCTCCAGGCTCCAGGAAGAGAAGTGCTGGTaGGGGCTGCATAAACTCTCC | + |
|
Preference number: 2 (lower is better) Translates to: SSGLAFPRRIASLFSRLQEEKCW*GLHKLS Trigger: GGAGAGTTTATGCAGCCCGCACCAGCACTTCTCTTC...CTGGAGCCTGGAGAAGAGCGATGCTATGCGGCGAGGGAAAGCAAGCCCGGAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090487.12 ENSMUST00000163229.2 ENSMUST00000164560.8 ENSMUST00000166462.2 |
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| 3UTR-3UTR CCA 90 bp | CTCCTCCGGGCTTGCTTTCCCTCGCCGCATAGCATCGCTCTTCTCCAGGCTCCACAGGCTCCAGACTTTTaGACAGTGCACCCCAATCGA | + |
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Preference number: 2 (lower is better) Translates to: LLRACFPSPHSIALLQAPQAPDF*TVHPNR Trigger: TCGATTGGGGTGCACTGTCCAAAAGTCTGGAGCCTG...TGGAGCCTGGAGAAGAGCGATGCTATGCGGCGAGGGAAAGCAAGCCCGGAGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090487.12 ENSMUST00000163229.2 ENSMUST00000164560.8 ENSMUST00000166462.2 |
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| 3UTR-3UTR GCA 90 bp | TCGCCGCATAGCATCGCTCTTCTCCAGGCTCCAGACTTTTGGACAGTGCACCCCGAAGAGAAGTGCTGGTaGGGGCTGCATAAACTCTCC | + |
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Preference number: 2 (lower is better) Translates to: SPHSIALLQAPDFWTVHPEEKCW*GLHKLS Trigger: GGAGAGTTTATGCAGCCCGCACCAGCACTTCTCTTC...GGGGTGCACTGTCCAAAAGTCTGGAGCCTGGAGAAGAGCGATGCTATGCGGCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000090487.12 ENSMUST00000163229.2 ENSMUST00000164560.8 ENSMUST00000166462.2 |
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| 3UTR-3UTR CCA 90 bp | CTGTATTCTGAGGCGGTGGTGAGAACACACGGAGAGGCTGACGGAATGAGGAGGGCTTGGCGCTCTGGATaGTCTGTTCCATGTCTGGCT | + |
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Preference number: 2 (lower is better) Translates to: LYSEAVVRTHGEADGMRRAWRSG*SVPCLA Trigger: AGCCAGACATGGAACAGACCATCCAGAGCGCCAAGC...CCTCCTCATTCCGTCAGCCTCTCCGTGTGTTCTCACCACCGCCTCAGAATACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163229.2 |
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| 3UTR-3UTR TCA 90 bp | CGGGCTTGCTTTCCCTCGCCGCATAGCATCGCTCTTCTCCAGGCTCCAGACTTTAGTAGATTTTCTCGGTaGCTGTCCTCAACCGCAGGA | + |
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Preference number: 2 (lower is better) Translates to: RACFPSPHSIALLQAPDFSRFSR*LSSTAG Trigger: TCCTGCGGTTGAGGACAGTCACCGAGAAAATCTACT...AAAGTCTGGAGCCTGGAGAAGAGCGATGCTATGCGGCGAGGGAAAGCAAGCCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163229.2 |
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| 3UTR-3UTR GCA 90 bp | GCTTTCCCTCGCCGCATAGCATCGCTCTTCTCCAGGCTCCAGACTTTTGGACAGGAAGAGAAGTGCTGGTaGGGGCTGCATAAACTCTCC | + |
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Preference number: 2 (lower is better) Translates to: AFPRRIASLFSRLQTFGQEEKCW*GLHKLS Trigger: GGAGAGTTTATGCAGCCCGCACCAGCACTTCTCTTC...CTGTCCAAAAGTCTGGAGCCTGGAGAAGAGCGATGCTATGCGGCGAGGGAAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090487.12 ENSMUST00000163229.2 ENSMUST00000164560.8 ENSMUST00000166462.2 |
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| 3UTR-3UTR CCA 90 bp | AGAAGTGCTGGTGCGGGCTGCATAAACTCTCCCCAATGGGAAAGGAAGCATCATGTCTCGCTCTCCCCCTaGGCCATCAGATGTGTGAGG | + |
|
Preference number: 2 (lower is better) Translates to: RSAGAGCINSPQWERKHHVSLSP*AIRCVR Trigger: CCTCACACATCTGATGGCCCAGGGGGAGAGCGAGAC...ATGATGCTTCCTTTCCCATTGGGGAGAGTTTATGCAGCCCGCACCAGCACTTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163229.2 |
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| 3UTR-3UTR TCA 90 bp | GCGGGGCATCTCTCAGAGATGTACTTCCTGTCTAGTTCTCTTCAGCTTTTCTCCCCAGAAACTGAATGCTaGAGAGAAGTGCTGGTGCGG | + |
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Preference number: 2 (lower is better) Translates to: AGHLSEMYFLSSSLQLFSPETEC*REVLVR Trigger: CCGCACCAGCACTTCTCTTCAGCATTCAGTTTCTGG...GGAGAAAAGCTGAAGAGAACTAGACAGGAAGTACATCTCTGAGAGATGCCCCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000090487.12 |
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| 3UTR-3UTR TCA 90 bp | CTCCACAAACTTCAAAGGGAGAATGCTCTTCAGGTTGATGCTTGGCGCTCTGGACCAGAAACTGAATGCTaGAGAGAAGTGCTGGTGCGG | + |
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Preference number: 2 (lower is better) Translates to: LHKLQRENALQVDAWRSGPETEC*REVLVR Trigger: CCGCACCAGCACTTCTCTTCAGCATTCAGTTTCTGG...TCCAGAGCGCCAAGCATCAACCTGAAGAGCATTCTCCCTTTGAAGTTTGTGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163229.2 |
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| 3UTR CAA 90 bp | GGGATGCTGTCTTCACAGGGAGTAGCTTTCTCTGAGCTGGTCTTGTaGATGTGCATCTTTTCGCTCCTGCTGGAACTGTACTGTTTCTGC | + |
|
Preference number: 2 (lower is better) Translates to: GMLSSQGVAFSELVL*MCIFSLLLELYCFC Trigger: GCAGAAACAGTACAGTTCCAGCAGGAGCGAAAAGATGCACATCAACAAGACCAGCTCAGAGAAAGCTACTCCCTGTGAAGACAGCATCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163229.2 |
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| 3UTR CAA 90 bp | CAGGGGATGCTGTCTTCACAGGGAGTAGCTTTCTCTGAGCTGGTCTaGTTGATGTGCATCTTTTCGCTCCTGCTGGAACTGTACTGTTTC | + |
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Preference number: 2 (lower is better) Translates to: QGMLSSQGVAFSELV*LMCIFSLLLELYCF Trigger: GAAACAGTACAGTTCCAGCAGGAGCGAAAAGATGCACATCAACAAGACCAGCTCAGAGAAAGCTACTCCCTGTGAAGACAGCATCCCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163229.2 |
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| 3UTR CAA 90 bp | GGGTTTTCTCTTTCCCATTCTCCGAACATGAATGCATCCCTCCAGTaGAGATCACAGGTACAGGGGATGCTGTCTTCACAGGGAGTAGCT | + |
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Preference number: 2 (lower is better) Translates to: GFSLSHSPNMNASLQ*RSQVQGMLSSQGVA Trigger: AGCTACTCCCTGTGAAGACAGCATCCCCTGTACCTGTGATCTCAACTGGAGGGATGCATTCATGTTCGGAGAATGGGAAAGAGAAAACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163229.2 |
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| 3UTR-3UTR TCA 90 bp | GCGGGGCATCTCTCAGAGATGTACTTCCTGTCTAGTTCTCTTCAGCTTTTCTCCTCTTGTCAGTGCTGCTaGGATAACTCTGGTTCGCTC | + |
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Preference number: 2 (lower is better) Translates to: AGHLSEMYFLSSSLQLFSSCQCC*DNSGSL Trigger: GAGCGAACCAGAGTTATCTCAGCAGCACTGACAAGA...GGAGAAAAGCTGAAGAGAACTAGACAGGAAGTACATCTCTGAGAGATGCCCCGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090487.12 |
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| 3UTR-3UTR GCA 90 bp | GATCTGGAGCTCCACAAACTTCAAAGGGAGAATGCTCTTCAGGTTGATGCTTGGGAAGAGAAGTGCTGGTaGGGGCTGCATAAACTCTCC | + |
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Preference number: 2 (lower is better) Translates to: DLELHKLQRENALQVDAWEEKCW*GLHKLS Trigger: GGAGAGTTTATGCAGCCCGCACCAGCACTTCTCTTC...CCAAGCATCAACCTGAAGAGCATTCTCCCTTTGAAGTTTGTGGAGCTCCAGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163229.2 |
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| 3UTR-3UTR CCA 90 bp | GTTGATGTGCATCTTTTCGCTCCTGCTGGAACTGTACTGTTTCTGCTGATGCAAAGGCGGATCCAAAAGTaGAAGACAGTCTCAGGGTGG | + |
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Preference number: 2 (lower is better) Translates to: VDVHLFAPAGTVLFLLMQRRIQK*KTVSGW Trigger: CCACCCTGAGACTGTCTTCCACTTTTGGATCCGCCT...TTGCATCAGCAGAAACAGTACAGTTCCAGCAGGAGCGAAAAGATGCACATCAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163229.2 |
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| 3UTR-3UTR GCA 90 bp | GCGGGGCATCTCTCAGAGATGTACTTCCTGTCTAGTTCTCTTCAGCTTTTCTCCTACTTATTTTCTTTCTaGCTGTCTTCTCCAACTCCC | + |
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Preference number: 2 (lower is better) Translates to: AGHLSEMYFLSSSLQLFSYLFSF*LSSPTP Trigger: GGGAGTTGGAGAAGACAGGCAGAAAGAAAATAAGTA...GGAGAAAAGCTGAAGAGAACTAGACAGGAAGTACATCTCTGAGAGATGCCCCGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000090487.12 |
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| 3UTR-3UTR CAA 90 bp | CTCCTCCGGGCTTGCTTTCCCTCGCCGCATAGCATCGCTCTTCTCCAGGCTCCAAGGATGGTAGGGTCCTaGGTGGTGATGGACAGACCC | + |
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Preference number: 3 (lower is better) Translates to: LLRACFPSPHSIALLQAPRMVGS*VVMDRP Trigger: GGGTCTGTCCATCACCACCAAGGACCCTACCATCCT...TGGAGCCTGGAGAAGAGCGATGCTATGCGGCGAGGGAAAGCAAGCCCGGAGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163229.2 |
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| 3UTR TCA 72 bp | CCGTGGCCTGCTGGAGGCAGCCAGAGTACCGAGGAGTaGGAGGGGCTGTGGTCCAGAAGGGTTTTCTCTTTC | + |
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Preference number: 3 (lower is better) Translates to: PWPAGGSQSTEE*EGLWSRRVFSF Trigger: GAAAGAGAAAACCCTTCTGGACCACAGCCCCTCTCACTCCTCGGTACTCTGGCTGCCTCCAGCAGGCCACGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163229.2 |
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| 3UTR GCA 72 bp | GTCTTCTCCAACTCCCTCCACCAGCTTCCGTGTTCCTaGTCCTCCGGGCTTGCTTTCCCTCGCCGCATAGCA | + |
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Preference number: 3 (lower is better) Translates to: VFSNSLHQLPCS*SSGLAFPRRIA Trigger: TGCTATGCGGCGAGGGAAAGCAAGCCCGGAGGAGCAGGAACACGGAAGCTGGTGGAGGGAGTTGGAGAAGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090487.12 |
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| 3UTR CCA 72 bp | TCGGAAAAGATCTGGGAGAGGGTCTCGCTCTCCCCCTaGGCCATCAGATGTGTGAGGCTCTCACTGGGCTGG | + |
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Preference number: 3 (lower is better) Translates to: SEKIWERVSLSP*AIRCVRLSLGW Trigger: CCAGCCCAGTGAGAGCCTCACACATCTGATGGCCCAGGGGGAGAGCGAGACCCTCTCCCAGATCTTTTCCGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163229.2 |
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| 3UTR TCA 72 bp | AGAGGGTCTCGCTCTCCCCCTGGGCCATCAGATGTGTaGGGCTCTCACTGGGCTGGAGGCCTTTCGATTTCT | + |
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Preference number: 3 (lower is better) Translates to: RGSRSPPGPSDV*GSHWAGGLSIS Trigger: AGAAATCGAAAGGCCTCCAGCCCAGTGAGAGCCTCACACATCTGATGGCCCAGGGGGAGAGCGAGACCCTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163229.2 |
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| 3UTR-3UTR CAA 90 bp | TCGCCGCATAGCATCGCTCTTCTCCAGGCTCCAGACTTTTGGACAGTGCACCCCCCAGGCTCCAGACTTTaGGACAGTGCACCCCAATCG | + |
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Preference number: 3 (lower is better) Translates to: SPHSIALLQAPDFWTVHPPGSRL*DSAPQS Trigger: CGATTGGGGTGCACTGTCCAAAAGTCTGGAGCCTGG...GGGGTGCACTGTCCAAAAGTCTGGAGCCTGGAGAAGAGCGATGCTATGCGGCGA 59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000090487.12 ENSMUST00000163229.2 ENSMUST00000164560.8 ENSMUST00000166462.2 |
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| 3UTR CCA 72 bp | TTCTCGGTGACTGTCCTCAACCGCAGGACGCGTTCCTaGTCGTCCCAGATCTGGAGCTCCACAAACTTCAAA | + |
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Preference number: 3 (lower is better) Translates to: FSVTVLNRRTRS*SSQIWSSTNFK Trigger: TTTGAAGTTTGTGGAGCTCCAGATCTGGGACGACCAGGAACGCGTCCTGCGGTTGAGGACAGTCACCGAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163229.2 |
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| 3UTR CCA 72 bp | CCCTGGGCCATCAGATGTGTGAGGCTCTCACTGGGCTaGAGGCCTTTCGATTTCTTCTGCACTAACTCAGTC | + |
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Preference number: 3 (lower is better) Translates to: PWAIRCVRLSLG*RPFDFFCTNSV Trigger: GACTGAGTTAGTGCAGAAGAAATCGAAAGGCCTCCAGCCCAGTGAGAGCCTCACACATCTGATGGCCCAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163229.2 |
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| 3UTR TCA 72 bp | GCTGACGGAATGAGGAGGCGCTCTTGTCAGTGCTGCTaGGATAACTCTGGTTCGCTCCTAGTAGCAACTTCC | + |
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Preference number: 3 (lower is better) Translates to: ADGMRRRSCQCC*DNSGSLLVATS Trigger: GGAAGTTGCTACTAGGAGCGAACCAGAGTTATCTCAGCAGCACTGACAAGAGCGCCTCCTCATTCCGTCAGC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090487.12 ENSMUST00000163229.2 ENSMUST00000164560.8 ENSMUST00000166462.2 |
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| 3UTR TCA 72 bp | GCTCTGGATGGTCTGTTCCATGTCTGGCTCTGCCCCTaGTGCCATTTGACTCTGGCCATAAGGAGGATGTTC | + |
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Preference number: 3 (lower is better) Translates to: ALDGLFHVWLCP*CHLTLAIRRMF Trigger: GAACATCCTCCTTATGGCCAGAGTCAAATGGCATCAGGGGCAGAGCCAGACATGGAACAGACCATCCAGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163229.2 |
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| 3UTR GCA 72 bp | AGGCTCTCACTGGGCTGGAGGCCTTTCGATTTCTTCTaGACTAACTCAGTCTTTCCACCTGGGCTGCAAAGG | + |
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Preference number: 3 (lower is better) Translates to: RLSLGWRPFDFF*TNSVFPPGLQR Trigger: CCTTTGCAGCCCAGGTGGAAAGACTGAGTTAGTGCAGAAGAAATCGAAAGGCCTCCAGCCCAGTGAGAGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163229.2 |
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| 3UTR TCA 72 bp | ATCTTTTCGCTCCTGCTGGAACTGTACTGTTTCTGCTaGTGCAAGTCGGAAAAGATCTGGGAGAGGGTCTCG | + |
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Preference number: 3 (lower is better) Translates to: IFSLLLELYCFC*CKSEKIWERVS Trigger: CGAGACCCTCTCCCAGATCTTTTCCGACTTGCATCAGCAGAAACAGTACAGTTCCAGCAGGAGCGAAAAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163229.2 |
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| 3UTR TCA 72 bp | ACAGGGGATGCTGTCTTCACAGGGAGTAGCTTTCTCTaGGCTGGTCTTGTTGATGTGCATCTTTTCGCTCCT | + |
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Preference number: 3 (lower is better) Translates to: TGDAVFTGSSFL*AGLVDVHLFAP Trigger: AGGAGCGAAAAGATGCACATCAACAAGACCAGCTCAGAGAAAGCTACTCCCTGTGAAGACAGCATCCCCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163229.2 |
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| 3UTR CCA 72 bp | AAACTTCAAAGGGAGAATGCTCTTCAGGTTGATGCTTaGCGCTCTGGATGGTCTGTTCCATGTCTGGCTCTG | + |
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Preference number: 3 (lower is better) Translates to: KLQRENALQVDA*RSGWSVPCLAL Trigger: CAGAGCCAGACATGGAACAGACCATCCAGAGCGCCAAGCATCAACCTGAAGAGCATTCTCCCTTTGAAGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163229.2 |
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| 3UTR CCA 72 bp | AGAAGTGCTGGTGCGGGCTGCATAAACTCTCCCCAATaGGAAAGGAAGCATCATATAGAGTTTCCTCCAGTT | + |
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Preference number: 3 (lower is better) Translates to: RSAGAGCINSPQ*ERKHHIEFPPV Trigger: AACTGGAGGAAACTCTATATGATGCTTCCTTTCCCATTGGGGAGAGTTTATGCAGCCCGCACCAGCACTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163229.2 |
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| CDS-3UTR TCA 90 bp | TCCTGCTCCTCCGGGCTTGCTTTCCCTCGCCGCATAGCATCGCTCTTCTCCAGGGTCTGGCTCTGCCCCTaGTGCCATTTGACTCTGGCC | + |
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Preference number: 4 (lower is better) Translates to: SCSSGLAFPRRIASLFSRVWLCP*CHLTLA Trigger: GGCCAGAGTCAAATGGCATCAGGGGCAGAGCCAGAC...CCTGGAGAAGAGCGATGCTATGCGGCGAGGGAAAGCAAGCCCGGAGGAGCAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090487.12 ENSMUST00000164560.8 ENSMUST00000166462.2 |
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| CDS-3UTR TCA 90 bp | TCCTCCGGGCTTGCTTTCCCTCGCCGCATAGCATCGCTCTTCTCCAGGCTCCAGGTCTGGCTCTGCCCCTaGTGCCATTTGACTCTGGCC | + |
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Preference number: 4 (lower is better) Translates to: SSGLAFPRRIASLFSRLQVWLCP*CHLTLA Trigger: GGCCAGAGTCAAATGGCATCAGGGGCAGAGCCAGAC...CTGGAGCCTGGAGAAGAGCGATGCTATGCGGCGAGGGAAAGCAAGCCCGGAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090487.12 ENSMUST00000164560.8 ENSMUST00000166462.2 |
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| CDS-3UTR TCA 90 bp | TCCTCCGGGCTTGCTTTCCCTCGCCGCATAGCATCGCTCTTCTCCAGGCTCCAGCAGGCAAGAGGCCCCTaGACTTCTCCCAGGCATTCA | + |
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Preference number: 4 (lower is better) Translates to: SSGLAFPRRIASLFSRLQQARGP*TSPRHS Trigger: TGAATGCCTGGGAGAAGTTCAGGGGCCTCTTGCCTG...CTGGAGCCTGGAGAAGAGCGATGCTATGCGGCGAGGGAAAGCAAGCCCGGAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090487.12 ENSMUST00000163229.2 ENSMUST00000164560.8 ENSMUST00000166462.2 |
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| CDS-3UTR TCA 90 bp | TCCTGCTCCTCCGGGCTTGCTTTCCCTCGCCGCATAGCATCGCTCTTCTCCAGGTTGGGTACCAGGCAGTaGGTGACAAGGATGGTAGGG | + |
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Preference number: 4 (lower is better) Translates to: SCSSGLAFPRRIASLFSRLGTRQ*VTRMVG Trigger: CCCTACCATCCTTGTCACTCACTGCCTGGTACCCAA...CCTGGAGAAGAGCGATGCTATGCGGCGAGGGAAAGCAAGCCCGGAGGAGCAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090487.12 ENSMUST00000164560.8 ENSMUST00000166462.2 |
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| CDS-3UTR CCA 90 bp | TCCTGCTCCTCCGGGCTTGCTTTCCCTCGCCGCATAGCATCGCTCTTCTCCAGGGCTTGGCGCTCTGGATaGTCTGTTCCATGTCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SCSSGLAFPRRIASLFSRAWRSG*SVPCLA Trigger: AGCCAGACATGGAACAGACCATCCAGAGCGCCAAGC...CCTGGAGAAGAGCGATGCTATGCGGCGAGGGAAAGCAAGCCCGGAGGAGCAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090487.12 ENSMUST00000164560.8 ENSMUST00000166462.2 |
||
| CDS-3UTR CCA 90 bp | CGCCGCATAGCATCGCTCTTCTCCAGGCTCCAGACTTTTGGACAGTGCACCCCAGTCTCGCTCTCCCCCTaGGCCATCAGATGTGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RRIASLFSRLQTFGQCTPVSLSP*AIRCVR Trigger: CCTCACACATCTGATGGCCCAGGGGGAGAGCGAGAC...TGGGGTGCACTGTCCAAAAGTCTGGAGCCTGGAGAAGAGCGATGCTATGCGGCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000090487.12 ENSMUST00000164560.8 ENSMUST00000166462.2 |
||
| CDS-3UTR CCA 90 bp | TCGCCGCATAGCATCGCTCTTCTCCAGGCTCCAGACTTTTGGACAGTGCACCCCGTCTCGCTCTCCCCCTaGGCCATCAGATGTGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SPHSIALLQAPDFWTVHPVSLSP*AIRCVR Trigger: CCTCACACATCTGATGGCCCAGGGGGAGAGCGAGAC...GGGGTGCACTGTCCAAAAGTCTGGAGCCTGGAGAAGAGCGATGCTATGCGGCGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000090487.12 ENSMUST00000164560.8 ENSMUST00000166462.2 |
||
| CDS-3UTR CCA 90 bp | CGGGCTTGCTTTCCCTCGCCGCATAGCATCGCTCTTCTCCAGGCTCCAGACTTTGTCTCGCTCTCCCCCTaGGCCATCAGATGTGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RACFPSPHSIALLQAPDFVSLSP*AIRCVR Trigger: CCTCACACATCTGATGGCCCAGGGGGAGAGCGAGAC...AAAGTCTGGAGCCTGGAGAAGAGCGATGCTATGCGGCGAGGGAAAGCAAGCCCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000090487.12 ENSMUST00000164560.8 ENSMUST00000166462.2 |
||
| CDS-3UTR TCA 90 bp | CGCCGCATAGCATCGCTCTTCTCCAGGCTCCAGACTTTTGGACAGTGCACCCCACAGGCAAGAGGCCCCTaGACTTCTCCCAGGCATTCA | + |
|
Preference number: 4 (lower is better) Translates to: RRIASLFSRLQTFGQCTPQARGP*TSPRHS Trigger: TGAATGCCTGGGAGAAGTTCAGGGGCCTCTTGCCTG...TGGGGTGCACTGTCCAAAAGTCTGGAGCCTGGAGAAGAGCGATGCTATGCGGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000090487.12 ENSMUST00000163229.2 ENSMUST00000164560.8 ENSMUST00000166462.2 |
||
| CDS-3UTR TCA 90 bp | CTGTATTCTGAGGCGGTGGTGAGAACACACGGAGAGGCTGACGGAATGAGGAGGGTCTGGCTCTGCCCCTaGTGCCATTTGACTCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LYSEAVVRTHGEADGMRRVWLCP*CHLTLA Trigger: GGCCAGAGTCAAATGGCATCAGGGGCAGAGCCAGAC...CCTCCTCATTCCGTCAGCCTCTCCGTGTGTTCTCACCACCGCCTCAGAATACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090487.12 ENSMUST00000164560.8 ENSMUST00000166462.2 |
||
| CDS-3UTR CCA 90 bp | TCCTGCTCCTCCGGGCTTGCTTTCCCTCGCCGCATAGCATCGCTCTTCTCCAGGAAGACAGTCTCAGGGTaGTCGGGATGGAGCTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SCSSGLAFPRRIASLFSRKTVSG*SGWSFR Trigger: TCTGAAGCTCCATCCCGACCACCCTGAGACTGTCTT...CCTGGAGAAGAGCGATGCTATGCGGCGAGGGAAAGCAAGCCCGGAGGAGCAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090487.12 ENSMUST00000164560.8 ENSMUST00000166462.2 |
||
| CDS-3UTR TCA 90 bp | CTCCTCCGGGCTTGCTTTCCCTCGCCGCATAGCATCGCTCTTCTCCAGGCTCCACTGAGCTGGTCTTGTTaGTGTGCATCTTTTCGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLRACFPSPHSIALLQAPLSWSC*CASFRS Trigger: GGAGCGAAAAGATGCACATCAACAAGACCAGCTCAG...TGGAGCCTGGAGAAGAGCGATGCTATGCGGCGAGGGAAAGCAAGCCCGGAGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090487.12 ENSMUST00000164560.8 ENSMUST00000166462.2 |
||
| CDS-3UTR CCA 90 bp | CGCCGCATAGCATCGCTCTTCTCCAGGCTCCAGACTTTTGGACAGTGCACCCCAGCTTGGCGCTCTGGATaGTCTGTTCCATGTCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RRIASLFSRLQTFGQCTPAWRSG*SVPCLA Trigger: AGCCAGACATGGAACAGACCATCCAGAGCGCCAAGC...TGGGGTGCACTGTCCAAAAGTCTGGAGCCTGGAGAAGAGCGATGCTATGCGGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090487.12 ENSMUST00000164560.8 ENSMUST00000166462.2 |
||
| CDS-3UTR TCA 90 bp | CTGTATTCTGAGGCGGTGGTGAGAACACACGGAGAGGCTGACGGAATGAGGAGGTTGGGTACCAGGCAGTaGGTGACAAGGATGGTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LYSEAVVRTHGEADGMRRLGTRQ*VTRMVG Trigger: CCCTACCATCCTTGTCACTCACTGCCTGGTACCCAA...CCTCCTCATTCCGTCAGCCTCTCCGTGTGTTCTCACCACCGCCTCAGAATACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090487.12 ENSMUST00000164560.8 ENSMUST00000166462.2 |
||
| CDS-3UTR CCA 90 bp | CGGGCTTGCTTTCCCTCGCCGCATAGCATCGCTCTTCTCCAGGCTCCAGACTTTAAGACAGTCTCAGGGTaGTCGGGATGGAGCTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RACFPSPHSIALLQAPDFKTVSG*SGWSFR Trigger: TCTGAAGCTCCATCCCGACCACCCTGAGACTGTCTT...AAAGTCTGGAGCCTGGAGAAGAGCGATGCTATGCGGCGAGGGAAAGCAAGCCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090487.12 ENSMUST00000164560.8 ENSMUST00000166462.2 |
||
| CDS-3UTR CCA 90 bp | CGCCGCATAGCATCGCTCTTCTCCAGGCTCCAGACTTTTGGACAGTGCACCCCAAAGACAGTCTCAGGGTaGTCGGGATGGAGCTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RRIASLFSRLQTFGQCTPKTVSG*SGWSFR Trigger: TCTGAAGCTCCATCCCGACCACCCTGAGACTGTCTT...TGGGGTGCACTGTCCAAAAGTCTGGAGCCTGGAGAAGAGCGATGCTATGCGGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090487.12 ENSMUST00000164560.8 ENSMUST00000166462.2 |
||
| CDS-3UTR CCA 90 bp | CGCCGCATAGCATCGCTCTTCTCCAGGCTCCAGACTTTTGGACAGTGCACCCCAAGGCGGATCCAAAAGTaGAAGACAGTCTCAGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RRIASLFSRLQTFGQCTPRRIQK*KTVSGW Trigger: CCACCCTGAGACTGTCTTCCACTTTTGGATCCGCCT...TGGGGTGCACTGTCCAAAAGTCTGGAGCCTGGAGAAGAGCGATGCTATGCGGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000090487.12 ENSMUST00000164560.8 ENSMUST00000166462.2 |
||
| CDS-3UTR TCA 90 bp | TCGCCGCATAGCATCGCTCTTCTCCAGGCTCCAGACTTTTGGACAGTGCACCCCAGTAGATTTTCTCGGTaGCTGTCCTCAACCGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SPHSIALLQAPDFWTVHPSRFSR*LSSTAG Trigger: TCCTGCGGTTGAGGACAGTCACCGAGAAAATCTACT...GGGGTGCACTGTCCAAAAGTCTGGAGCCTGGAGAAGAGCGATGCTATGCGGCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000090487.12 ENSMUST00000164560.8 ENSMUST00000166462.2 |
||
| CDS-3UTR TCA 90 bp | TCGCCGCATAGCATCGCTCTTCTCCAGGCTCCAGACTTTTGGACAGTGCACCCCCTGAGCTGGTCTTGTTaGTGTGCATCTTTTCGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SPHSIALLQAPDFWTVHPLSWSC*CASFRS Trigger: GGAGCGAAAAGATGCACATCAACAAGACCAGCTCAG...GGGGTGCACTGTCCAAAAGTCTGGAGCCTGGAGAAGAGCGATGCTATGCGGCGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000090487.12 ENSMUST00000164560.8 ENSMUST00000166462.2 |
||
| CDS-3UTR GCA 90 bp | TCCTCCGGGCTTGCTTTCCCTCGCCGCATAGCATCGCTCTTCTCCAGGCTCCAGGCATCTTTTCGCTCCTaGTGGAACTGTACTGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SSGLAFPRRIASLFSRLQASFRS*WNCTVS Trigger: AGAAACAGTACAGTTCCAGCAGGAGCGAAAAGATGC...CTGGAGCCTGGAGAAGAGCGATGCTATGCGGCGAGGGAAAGCAAGCCCGGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164560.8 |
||
| CDS-3UTR CCA 90 bp | CTGTATTCTGAGGCGGTGGTGAGAACACACGGAGAGGCTGACGGAATGAGGAGGAGGCGGATCCAAAAGTaGAAGACAGTCTCAGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LYSEAVVRTHGEADGMRRRRIQK*KTVSGW Trigger: CCACCCTGAGACTGTCTTCCACTTTTGGATCCGCCT...CCTCCTCATTCCGTCAGCCTCTCCGTGTGTTCTCACCACCGCCTCAGAATACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090487.12 ENSMUST00000164560.8 ENSMUST00000166462.2 |
||
| CDS-3UTR TCA 90 bp | CTGTATTCTGAGGCGGTGGTGAGAACACACGGAGAGGCTGACGGAATGAGGAGGAGTAGATTTTCTCGGTaGCTGTCCTCAACCGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LYSEAVVRTHGEADGMRRSRFSR*LSSTAG Trigger: TCCTGCGGTTGAGGACAGTCACCGAGAAAATCTACT...CCTCCTCATTCCGTCAGCCTCTCCGTGTGTTCTCACCACCGCCTCAGAATACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090487.12 ENSMUST00000164560.8 ENSMUST00000166462.2 |
||
| CDS-3UTR TCA 90 bp | GCTTTCCCTCGCCGCATAGCATCGCTCTTCTCCAGGCTCCAGACTTTTGGACAGAGTAGATTTTCTCGGTaGCTGTCCTCAACCGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: AFPRRIASLFSRLQTFGQSRFSR*LSSTAG Trigger: TCCTGCGGTTGAGGACAGTCACCGAGAAAATCTACT...CTGTCCAAAAGTCTGGAGCCTGGAGAAGAGCGATGCTATGCGGCGAGGGAAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090487.12 ENSMUST00000164560.8 ENSMUST00000166462.2 |
||
| CDS-3UTR TCA 90 bp | TTCCTCCAGTTAGGGACAGCCGTGGCCTGCTGGAGGCAGCCAGAGTACCGAGGAAGTTTCTGCTCCTTCTaGACAAAGTTGCTTTCGAAC | + |
|
Preference number: 4 (lower is better) Translates to: FLQLGTAVACWRQPEYRGSFCSF*TKLLSN Trigger: GTTCGAAAGCAACTTTGTTCAGAAGGAGCAGAAACT...TCCTCGGTACTCTGGCTGCCTCCAGCAGGCCACGGCTGTCCCTAACTGGAGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163229.2 |
||
| CDS-3UTR CCA 90 bp | CTCTGGTTCGCTCCTAGTAGCAACTTCCTGCTCCCCTTTGTCCAAATAGAGCCCGCTTGGCGCTCTGGATaGTCTGTTCCATGTCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LWFAPSSNFLLPFVQIEPAWRSG*SVPCLA Trigger: AGCCAGACATGGAACAGACCATCCAGAGCGCCAAGC...GGGCTCTATTTGGACAAAGGGGAGCAGGAAGTTGCTACTAGGAGCGAACCAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090487.12 ENSMUST00000164560.8 ENSMUST00000166462.2 |
||
| CDS-3UTR GCA 90 bp | TCCTCCGGGCTTGCTTTCCCTCGCCGCATAGCATCGCTCTTCTCCAGGCTCCAGCCTTTCGATTTCTTCTaGACTAACTCAGTCTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SSGLAFPRRIASLFSRLQPFDFF*TNSVFP Trigger: TGGAAAGACTGAGTTAGTGCAGAAGAAATCGAAAGG...CTGGAGCCTGGAGAAGAGCGATGCTATGCGGCGAGGGAAAGCAAGCCCGGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090487.12 ENSMUST00000164560.8 ENSMUST00000166462.2 |
||
| CDS-3UTR GCA 90 bp | TCCTGCTCCTCCGGGCTTGCTTTCCCTCGCCGCATAGCATCGCTCTTCTCCAGGCCTTTCGATTTCTTCTaGACTAACTCAGTCTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SCSSGLAFPRRIASLFSRPFDFF*TNSVFP Trigger: TGGAAAGACTGAGTTAGTGCAGAAGAAATCGAAAGG...CCTGGAGAAGAGCGATGCTATGCGGCGAGGGAAAGCAAGCCCGGAGGAGCAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090487.12 ENSMUST00000164560.8 ENSMUST00000166462.2 |
||
| CDS-3UTR CCA 90 bp | CTCTGGTTCGCTCCTAGTAGCAACTTCCTGCTCCCCTTTGTCCAAATAGAGCCCAGGCGGATCCAAAAGTaGAAGACAGTCTCAGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LWFAPSSNFLLPFVQIEPRRIQK*KTVSGW Trigger: CCACCCTGAGACTGTCTTCCACTTTTGGATCCGCCT...GGGCTCTATTTGGACAAAGGGGAGCAGGAAGTTGCTACTAGGAGCGAACCAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090487.12 ENSMUST00000164560.8 ENSMUST00000166462.2 |
||
| CDS-3UTR TCA 90 bp | TCGCCGCATAGCATCGCTCTTCTCCAGGCTCCAGACTTTTGGACAGTGCACCCCAGTTTCTGCTCCTTCTaGCCTGAACAAAGTTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SPHSIALLQAPDFWTVHPSFCSF*PEQSCF Trigger: AAAGCAACTTTGTTCAGGTCAGAAGGAGCAGAAACT...GGGGTGCACTGTCCAAAAGTCTGGAGCCTGGAGAAGAGCGATGCTATGCGGCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090487.12 ENSMUST00000164560.8 ENSMUST00000166462.2 |
||
| CDS-3UTR TCA 90 bp | CGGGCTTGCTTTCCCTCGCCGCATAGCATCGCTCTTCTCCAGGCTCCAGACTTTAGTTTCTGCTCCTTCTaGCCTGAACAAAGTTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RACFPSPHSIALLQAPDFSFCSF*PEQSCF Trigger: AAAGCAACTTTGTTCAGGTCAGAAGGAGCAGAAACT...AAAGTCTGGAGCCTGGAGAAGAGCGATGCTATGCGGCGAGGGAAAGCAAGCCCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090487.12 ENSMUST00000164560.8 ENSMUST00000166462.2 |
||
| CDS-3UTR CCA 90 bp | TCCTGCTCCTCCGGGCTTGCTTTCCCTCGCCGCATAGCATCGCTCTTCTCCAGGAAACAGATTGAATTCTaGAGAATGAACCATCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SCSSGLAFPRRIASLFSRKQIEF*RMNHLA Trigger: TGCCAGATGGTTCATTCTCCAGAATTCAATCTGTTT...CCTGGAGAAGAGCGATGCTATGCGGCGAGGGAAAGCAAGCCCGGAGGAGCAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090487.12 ENSMUST00000163229.2 ENSMUST00000164560.8 ENSMUST00000166462.2 |
||
| CDS-3UTR CCA 90 bp | CTCCTCCGGGCTTGCTTTCCCTCGCCGCATAGCATCGCTCTTCTCCAGGCTCCAAAACAGATTGAATTCTaGAGAATGAACCATCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LLRACFPSPHSIALLQAPKQIEF*RMNHLA Trigger: TGCCAGATGGTTCATTCTCCAGAATTCAATCTGTTT...TGGAGCCTGGAGAAGAGCGATGCTATGCGGCGAGGGAAAGCAAGCCCGGAGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090487.12 ENSMUST00000163229.2 ENSMUST00000164560.8 ENSMUST00000166462.2 |
||
| CDS-3UTR CCA 90 bp | CTGTATTCTGAGGCGGTGGTGAGAACACACGGAGAGGCTGACGGAATGAGGAGGTCTTTTCGCTCCTGCTaGAACTGTACTGTTTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LYSEAVVRTHGEADGMRRSFRSC*NCTVSA Trigger: AGCAGAAACAGTACAGTTCCAGCAGGAGCGAAAAGA...CCTCCTCATTCCGTCAGCCTCTCCGTGTGTTCTCACCACCGCCTCAGAATACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164560.8 |
||
| CDS-3UTR CCA 90 bp | GAGGATGTTCGGAAGGGGAAGGCAAGGTACGGAGGAGGTCACCCCAAGGGCCATAAACAGATTGAATTCTaGAGAATGAACCATCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: EDVRKGKARYGGGHPKGHKQIEF*RMNHLA Trigger: TGCCAGATGGTTCATTCTCCAGAATTCAATCTGTTT...ATGGCCCTTGGGGTGACCTCCTCCGTACCTTGCCTTCCCCTTCCGAACATCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163229.2 |
||
| CDS-3UTR CCA 90 bp | CGCCGCATAGCATCGCTCTTCTCCAGGCTCCAGACTTTTGGACAGTGCACCCCACAAGGGCCATTGTGTTaGAAGCCTTATAGATTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RRIASLFSRLQTFGQCTPQGPLC*KPYRFL Trigger: AAGAAATCTATAAGGCTTCCAACACAATGGCCCTTG...TGGGGTGCACTGTCCAAAAGTCTGGAGCCTGGAGAAGAGCGATGCTATGCGGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090487.12 ENSMUST00000164560.8 ENSMUST00000166462.2 |
||
| CDS-3UTR TCA 90 bp | CTTGTGTTACTTATTTTCTTTCTGCCTGTCTTCTCCAACTCCCTCCACCAGCTTCAGGCAAGAGGCCCCTaGACTTCTCCCAGGCATTCA | + |
|
Preference number: 4 (lower is better) Translates to: LVLLIFFLPVFSNSLHQLQARGP*TSPRHS Trigger: TGAATGCCTGGGAGAAGTTCAGGGGCCTCTTGCCTG...AAGCTGGTGGAGGGAGTTGGAGAAGACAGGCAGAAAGAAAATAAGTAACACAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090487.12 |
||
| CDS-3UTR GCA 90 bp | GCTTTCCCTCGCCGCATAGCATCGCTCTTCTCCAGGCTCCAGACTTTTGGACAGCCTTTCGATTTCTTCTaGACTAACTCAGTCTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: AFPRRIASLFSRLQTFGQPFDFF*TNSVFP Trigger: TGGAAAGACTGAGTTAGTGCAGAAGAAATCGAAAGG...CTGTCCAAAAGTCTGGAGCCTGGAGAAGAGCGATGCTATGCGGCGAGGGAAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090487.12 ENSMUST00000164560.8 ENSMUST00000166462.2 |
||
| 3UTR CAA 72 bp | CTTTCCCATTCTCCGAACATGAATGCATCCCTCCAGTaGAGATCACAGGTACAGGGGATGCTGTCTTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: LSHSPNMNASLQ*RSQVQGMLSSQ Trigger: CTGTGAAGACAGCATCCCCTGTACCTGTGATCTCAACTGGAGGGATGCATTCATGTTCGGAGAATGGGAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163229.2 |
||
| CDS-3UTR TCA 90 bp | CTTGTGTTACTTATTTTCTTTCTGCCTGTCTTCTCCAACTCCCTCCACCAGCTTTTGGGTACCAGGCAGTaGGTGACAAGGATGGTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LVLLIFFLPVFSNSLHQLLGTRQ*VTRMVG Trigger: CCCTACCATCCTTGTCACTCACTGCCTGGTACCCAA...AAGCTGGTGGAGGGAGTTGGAGAAGACAGGCAGAAAGAAAATAAGTAACACAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090487.12 |
||
| CDS-3UTR GCA 90 bp | CTGGTCTTGTTGATGTGCATCTTTTCGCTCCTGCTGGAACTGTACTGTTTCTGCCCTTCTGAACAAAGTTaGTTTCGAACACCACGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LVLLMCIFSLLLELYCFCPSEQS*FRTPRS Trigger: ACTCCGTGGTGTTCGAAAGCAACTTTGTTCAGAAGG...GCAGAAACAGTACAGTTCCAGCAGGAGCGAAAAGATGCACATCAACAAGACCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163229.2 |
||
| CDS-3UTR CCA 90 bp | GCGGGGCATCTCTCAGAGATGTACTTCCTGTCTAGTTCTCTTCAGCTTTTCTCCAAACAGATTGAATTCTaGAGAATGAACCATCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: AGHLSEMYFLSSSLQLFSKQIEF*RMNHLA Trigger: TGCCAGATGGTTCATTCTCCAGAATTCAATCTGTTT...GGAGAAAAGCTGAAGAGAACTAGACAGGAAGTACATCTCTGAGAGATGCCCCGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090487.12 |
||
| CDS-3UTR CAA 90 bp | CGCCGCATAGCATCGCTCTTCTCCAGGCTCCAGACTTTTGGACAGTGCACCCCAAGGATGGTAGGGTCCTaGGTGGTGATGGACAGACCC | + |
|
Preference number: 5 (lower is better) Translates to: RRIASLFSRLQTFGQCTPRMVGS*VVMDRP Trigger: GGGTCTGTCCATCACCACCAAGGACCCTACCATCCT...TGGGGTGCACTGTCCAAAAGTCTGGAGCCTGGAGAAGAGCGATGCTATGCGGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090487.12 ENSMUST00000164560.8 ENSMUST00000166462.2 |
||
| CDS TCA 90 bp | GGCCCACTCCAGGGTTCGTTTCCCCATCCACAGGCAAGAGGCCCCTaGACTTCTCCCAGGCATTCAAGGAAGGGAAGGTTGGATATGATC | + |
|
Preference number: 5 (lower is better) Translates to: GPLQGSFPHPQARGP*TSPRHSRKGRLDMI Trigger: GATCATATCCAACCTTCCCTTCCTTGAATGCCTGGGAGAAGTTCAGGGGCCTCTTGCCTGTGGATGGGGAAACGAACCCTGGAGTGGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090487.12 ENSMUST00000163229.2 ENSMUST00000164560.8 ENSMUST00000166462.2 |
||
| CDS-3UTR CAA 90 bp | CTCTGGTTCGCTCCTAGTAGCAACTTCCTGCTCCCCTTTGTCCAAATAGAGCCCAGGATGGTAGGGTCCTaGGTGGTGATGGACAGACCC | + |
|
Preference number: 5 (lower is better) Translates to: LWFAPSSNFLLPFVQIEPRMVGS*VVMDRP Trigger: GGGTCTGTCCATCACCACCAAGGACCCTACCATCCT...GGGCTCTATTTGGACAAAGGGGAGCAGGAAGTTGCTACTAGGAGCGAACCAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090487.12 ENSMUST00000164560.8 ENSMUST00000166462.2 |
||
| CDS-3UTR CAA 90 bp | CTCCCCCTGGGCCATCAGATGTGTGAGGCTCTCACTGGGCTGGAGGCCTTTCGATCAAGGAAGGGAAGGTaGGATATGATCTTATCACTT | + |
|
Preference number: 5 (lower is better) Translates to: LPLGHQMCEALTGLEAFRSRKGR*DMILSL Trigger: AAGTGATAAGATCATATCCAACCTTCCCTTCCTTGA...TCGAAAGGCCTCCAGCCCAGTGAGAGCCTCACACATCTGATGGCCCAGGGGGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163229.2 |
||
| CDS TCA 90 bp | CTGGTCTTGTTGATGTGCATCTTTTCGCTCCTGTACTGTTTCTGCTaGTGCAAGTCGGAAAAGATCTGGGAGAGGGTCTCGCTCTCCCCC | + |
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Preference number: 5 (lower is better) Translates to: LVLLMCIFSLLYCFC*CKSEKIWERVSLSP Trigger: GGGGGAGAGCGAGACCCTCTCCCAGATCTTTTCCGACTTGCATCAGCAGAAACAGTACAGGAGCGAAAAGATGCACATCAACAAGACCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090487.12 |
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| CDS-3UTR CAA 90 bp | CTCTGGTTCGCTCCTAGTAGCAACTTCCTGCTCCCCTTTGTCCAAATAGAGCCCTCACCCCAAGGGCCATaGTGTTGGAAGCCTTATAGA | + |
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Preference number: 5 (lower is better) Translates to: LWFAPSSNFLLPFVQIEPSPQGP*CWKPYR Trigger: TCTATAAGGCTTCCAACACAATGGCCCTTGGGGTGA...GGGCTCTATTTGGACAAAGGGGAGCAGGAAGTTGCTACTAGGAGCGAACCAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090487.12 ENSMUST00000164560.8 ENSMUST00000166462.2 |
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| CDS-3UTR CAA 90 bp | TCGCCGCATAGCATCGCTCTTCTCCAGGCTCCAGACTTTTGGACAGTGCACCCCTCAAGGAAGGGAAGGTaGGATATGATCTTATCACTT | + |
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Preference number: 5 (lower is better) Translates to: SPHSIALLQAPDFWTVHPSRKGR*DMILSL Trigger: AAGTGATAAGATCATATCCAACCTTCCCTTCCTTGA...GGGGTGCACTGTCCAAAAGTCTGGAGCCTGGAGAAGAGCGATGCTATGCGGCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090487.12 ENSMUST00000163229.2 ENSMUST00000164560.8 ENSMUST00000166462.2 |
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| CDS TCA 90 bp | ATCACAGGTACAGGGGATGCTGTCTTCACAGGGAGTAGCTTTCTCTaGGCTGGTCTTGTTGATGTGCATCTTTTCGCTCCTGCTGTACTG | + |
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Preference number: 5 (lower is better) Translates to: ITGTGDAVFTGSSFL*AGLVDVHLFAPAVL Trigger: CAGTACAGCAGGAGCGAAAAGATGCACATCAACAAGACCAGCTCAGAGAAAGCTACTCCCTGTGAAGACAGCATCCCCTGTACCTGTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166462.2 |
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| CDS-3UTR CAA 90 bp | CTGTATTCTGAGGCGGTGGTGAGAACACACGGAGAGGCTGACGGAATGAGGAGGTCAAGGAAGGGAAGGTaGGATATGATCTTATCACTT | + |
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Preference number: 5 (lower is better) Translates to: LYSEAVVRTHGEADGMRRSRKGR*DMILSL Trigger: AAGTGATAAGATCATATCCAACCTTCCCTTCCTTGA...CCTCCTCATTCCGTCAGCCTCTCCGTGTGTTCTCACCACCGCCTCAGAATACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090487.12 ENSMUST00000163229.2 ENSMUST00000164560.8 ENSMUST00000166462.2 |
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| CDS TCA 90 bp | ATCACAGGTACAGGGGATGCTGTCTTCACAGGGAGTAGCTTTCTCTaGGCTGGTCTTGTTGATGTGCATCTTTTCGCTCCTGTACTGTTT | + |
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Preference number: 5 (lower is better) Translates to: ITGTGDAVFTGSSFL*AGLVDVHLFAPVLF Trigger: AAACAGTACAGGAGCGAAAAGATGCACATCAACAAGACCAGCTCAGAGAAAGCTACTCCCTGTGAAGACAGCATCCCCTGTACCTGTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090487.12 |
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| CDS TCA 90 bp | GCCCCTGAACTTCTCCCAGGCATTCAAGGAAGGGAAGGTTGGATATaGTCTTATCACTTTTACTGTCTTCTTCGATGTCCACCAAGACTT | + |
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Preference number: 5 (lower is better) Translates to: APELLPGIQGREGWI*SYHFYCLLRCPPRL Trigger: AAGTCTTGGTGGACATCGAAGAAGACAGTAAAAGTGATAAGATCATATCCAACCTTCCCTTCCTTGAATGCCTGGGAGAAGTTCAGGGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090487.12 ENSMUST00000163229.2 ENSMUST00000164560.8 ENSMUST00000166462.2 |
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| CDS-3UTR CAA 90 bp | GCGGGGCATCTCTCAGAGATGTACTTCCTGTCTAGTTCTCTTCAGCTTTTCTCCTCAAGGAAGGGAAGGTaGGATATGATCTTATCACTT | + |
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Preference number: 5 (lower is better) Translates to: AGHLSEMYFLSSSLQLFSSRKGR*DMILSL Trigger: AAGTGATAAGATCATATCCAACCTTCCCTTCCTTGA...GGAGAAAAGCTGAAGAGAACTAGACAGGAAGTACATCTCTGAGAGATGCCCCGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090487.12 |
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| CDS TCA 72 bp | CAGGGTTCGTTTCCCCATCCACAGGCAAGAGGCCCCTaGACTTCTCCCAGGCATTCAAGGAAGGGAAGGTTG | + |
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Preference number: 6 (lower is better) Translates to: QGSFPHPQARGP*TSPRHSRKGRL Trigger: CAACCTTCCCTTCCTTGAATGCCTGGGAGAAGTTCAGGGGCCTCTTGCCTGTGGATGGGGAAACGAACCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090487.12 ENSMUST00000163229.2 ENSMUST00000164560.8 ENSMUST00000166462.2 |
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| CDS CAA 90 bp | TCGGAAGGGGAAGGCAAGGTACGGAGGAGGTCACCCCAAGGGCCATaGTGTTGGAAGCCTTATAGATTTCTTTCCAGTTTCTGCTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: SEGEGKVRRRSPQGP*CWKPYRFLSSFCSF Trigger: GAAGGAGCAGAAACTGGAAAGAAATCTATAAGGCTTCCAACACAATGGCCCTTGGGGTGACCTCCTCCGTACCTTGCCTTCCCCTTCCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090487.12 ENSMUST00000164560.8 ENSMUST00000166462.2 |
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| CDS CAA 72 bp | GAAGGCAAGGTACGGAGGAGGTCACCCCAAGGGCCATaGTGTTGGAAGCCTTATAGATTTCTTTCCAGTTTC | + |
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Preference number: 6 (lower is better) Translates to: EGKVRRRSPQGP*CWKPYRFLSSF Trigger: GAAACTGGAAAGAAATCTATAAGGCTTCCAACACAATGGCCCTTGGGGTGACCTCCTCCGTACCTTGCCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090487.12 ENSMUST00000164560.8 ENSMUST00000166462.2 |
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| CDS TCA 72 bp | TTGATGTGCATCTTTTCGCTCCTGTACTGTTTCTGCTaGTGCAAGTCGGAAAAGATCTGGGAGAGGGTCTCG | + |
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Preference number: 6 (lower is better) Translates to: LMCIFSLLYCFC*CKSEKIWERVS Trigger: CGAGACCCTCTCCCAGATCTTTTCCGACTTGCATCAGCAGAAACAGTACAGGAGCGAAAAGATGCACATCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090487.12 |
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| CDS TCA 72 bp | CTTCTCCCAGGCATTCAAGGAAGGGAAGGTTGGATATaGTCTTATCACTTTTACTGTCTTCTTCGATGTCCA | + |
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Preference number: 6 (lower is better) Translates to: LLPGIQGREGWI*SYHFYCLLRCP Trigger: TGGACATCGAAGAAGACAGTAAAAGTGATAAGATCATATCCAACCTTCCCTTCCTTGAATGCCTGGGAGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090487.12 ENSMUST00000163229.2 ENSMUST00000164560.8 ENSMUST00000166462.2 |
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