Pregenerated sensors for FAM71E2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000092518Ensembl transcript IDs: ENSMUST00000163574.8, ENSMUST00000174409.2
Found 192 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GACTGCTTCTTGGTAGTGGCAAAGGGCAGATGCAGGGGCATGGTCTaGGCCCTCACATCTACCACTGTTGTATTCTGCCCTCCCACTAAC | + |
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Preference number: 1 (lower is better) Translates to: DCFLVVAKGRCRGMV*ALTSTTVVFCPPTN Trigger: GTTAGTGGGAGGGCAGAATACAACAGTGGTAGATGTGAGGGCCCAGACCATGCCCCTGCATCTGCCCTTTGCCACTACCAAGAAGCAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
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| 3UTR TCA 90 bp | AAGGGCTGCCCAGGGGTGGTTGGGGTCTTCTGGGAAACAGAAGGCTaGGACTTAAAGAAATGGCCAAGTGCACCTGAAGCCTTCCCTCTT | + |
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Preference number: 1 (lower is better) Translates to: KGCPGVVGVFWETEG*DLKKWPSAPEAFPL Trigger: AAGAGGGAAGGCTTCAGGTGCACTTGGCCATTTCTTTAAGTCTCAGCCTTCTGTTTCCCAGAAGACCCCAACCACCCCTGGGCAGCCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
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| 3UTR TCA 90 bp | GATTGCAGTTGTGACCAGATGAGAGGCACAGAGTCACCCACAGCCTaGGACCTGAGCGAGTGCTTGATTGGCTTGGTCAGCTTCATCTTG | + |
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Preference number: 1 (lower is better) Translates to: DCSCDQMRGTESPTA*DLSECLIGLVSFIL Trigger: CAAGATGAAGCTGACCAAGCCAATCAAGCACTCGCTCAGGTCTCAGGCTGTGGGTGACTCTGTGCCTCTCATCTGGTCACAACTGCAATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
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| 3UTR GCA 90 bp | TGCAGGGGCATGGTCTGGGCCCTCACATCTACCACTGTTGTATTCTaGCCTCCCACTAACAGCACAGGTTCCTGTTTCCCTTCAGTCTTT | + |
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Preference number: 1 (lower is better) Translates to: CRGMVWALTSTTVVF*PPTNSTGSCFPSVF Trigger: AAAGACTGAAGGGAAACAGGAACCTGTGCTGTTAGTGGGAGGGCAGAATACAACAGTGGTAGATGTGAGGGCCCAGACCATGCCCCTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
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| 3UTR CCA 90 bp | CAGCTTTGTGGGAAGACAGTGGGCTCACGTGTTTCTTTGAGCCTGTaGGTCTGGCCTTGTCTTTGGACTTCAGAAAGGAGGGATTGGGAG | + |
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Preference number: 1 (lower is better) Translates to: QLCGKTVGSRVSLSL*VWPCLWTSERRDWE Trigger: CTCCCAATCCCTCCTTTCTGAAGTCCAAAGACAAGGCCAGACCCACAGGCTCAAAGAAACACGTGAGCCCACTGTCTTCCCACAAAGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
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| 3UTR CCA 90 bp | ACAGAGAATGAGGAGGGCAGAGAGATAGTAGCTGGCTTCAGTCGCTaGTGTTTGGAGTTGGCCATGATCTTCATCTTGGCAAGGGCGAGC | + |
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Preference number: 1 (lower is better) Translates to: TENEEGREIVAGFSR*CLELAMIFILARAS Trigger: GCTCGCCCTTGCCAAGATGAAGATCATGGCCAACTCCAAACACCAGCGACTGAAGCCAGCTACTATCTCTCTGCCCTCCTCATTCTCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
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| 3UTR CCA 90 bp | GCCTTACAGTCGGGGTACACAGCACCCTGCTGGCCTTGGCCTCATTaGTCTTCTGGACAATTTGCTGACAGATCGAGTCTCCTGCATTAT | + |
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Preference number: 1 (lower is better) Translates to: ALQSGYTAPCWPWPH*SSGQFADRSSLLHY Trigger: ATAATGCAGGAGACTCGATCTGTCAGCAAATTGTCCAGAAGACCAATGAGGCCAAGGCCAGCAGGGTGCTGTGTACCCCGACTGTAAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163574.8 ENSMUST00000174409.2 |
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| 3UTR GCA 90 bp | ATCAAGATCTCCTTGGACTGCTTCTTGGTAGTGGCAAAGGGCAGATaGAGGGGCATGGTCTGGGCCCTCACATCTACCACTGTTGTATTC | + |
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Preference number: 1 (lower is better) Translates to: IKISLDCFLVVAKGR*RGMVWALTSTTVVF Trigger: GAATACAACAGTGGTAGATGTGAGGGCCCAGACCATGCCCCTGCATCTGCCCTTTGCCACTACCAAGAAGCAGTCCAAGGAGATCTTGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
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| 3UTR CCA 90 bp | GTGGGCTCACGTGTTTCTTTGAGCCTGTGGGTCTGGCCTTGTCTTTaGACTTCAGAAAGGAGGGATTGGGAGGAAAGATGTAGAAGGCAG | + |
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Preference number: 1 (lower is better) Translates to: VGSRVSLSLWVWPCL*TSERRDWEERCRRQ Trigger: CTGCCTTCTACATCTTTCCTCCCAATCCCTCCTTTCTGAAGTCCAAAGACAAGGCCAGACCCACAGGCTCAAAGAAACACGTGAGCCCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
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| 3UTR TCA 90 bp | CTTGGTTTTTGTGACTTGCATCTGATCCTCAGAAGATTGCAGTTGTaGCCAGATGAGAGGCACAGAGTCACCCACAGCCTGAGACCTGAG | + |
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Preference number: 1 (lower is better) Translates to: LGFCDLHLILRRLQL*PDERHRVTHSLRPE Trigger: CTCAGGTCTCAGGCTGTGGGTGACTCTGTGCCTCTCATCTGGTCACAACTGCAATCTTCTGAGGATCAGATGCAAGTCACAAAAACCAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
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| 3UTR CCA 90 bp | AGGCACAGAGTCACCCACAGCCTGAGACCTGAGCGAGTGCTTGATTaGCTTGGTCAGCTTCATCTTGGTCTTTGGTTTATGAGAAGAGAA | + |
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Preference number: 1 (lower is better) Translates to: RHRVTHSLRPERVLD*LGQLHLGLWFMRRE Trigger: TTCTCTTCTCATAAACCAAAGACCAAGATGAAGCTGACCAAGCCAATCAAGCACTCGCTCAGGTCTCAGGCTGTGGGTGACTCTGTGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
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| 3UTR CCA 90 bp | CTGAAAAGGTTGTCTGGCTGGTGTCAAAGGGCAAATTGGCCAACATaGAAGACACATTGGAAGCCACAGAGAATGAGGAGGGCAGAGAGA | + |
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Preference number: 1 (lower is better) Translates to: LKRLSGWCQRANWPT*KTHWKPQRMRRAER Trigger: TCTCTCTGCCCTCCTCATTCTCTGTGGCTTCCAATGTGTCTTCCATGTTGGCCAATTTGCCCTTTGACACCAGCCAGACAACCTTTTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
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| 3UTR CCA 90 bp | TCCATTAGACGACCCTGGCTTGTGTCTTCCTCAGAATCAGATTTGTaGGCCTGGTTTATCGTGTTAGAGATGATGCTGAAGATGGTCCGG | + |
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Preference number: 1 (lower is better) Translates to: SIRRPWLVSSSESDL*AWFIVLEMMLKMVR Trigger: CCGGACCATCTTCAGCATCATCTCTAACACGATAAACCAGGCCCACAAATCTGATTCTGAGGAAGACACAAGCCAGGGTCGTCTAATGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
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| 3UTR CCA 90 bp | TTGTGGGCACAGTCTTCTAACTTTTCCCTGCCCTTCAAGGCCTCTTaGGTTTCGCTAATCAAGATCTCCTTGGACTGCTTCTTGGTAGTG | + |
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Preference number: 1 (lower is better) Translates to: LWAQSSNFSLPFKAS*VSLIKISLDCFLVV Trigger: CACTACCAAGAAGCAGTCCAAGGAGATCTTGATTAGCGAAACCCAAGAGGCCTTGAAGGGCAGGGAAAAGTTAGAAGACTGTGCCCACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
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| 3UTR CCA 90 bp | CGGTCAAGACCCTCTTCTGCATCTCTGTCTCCTTGGACTTTAGATTaGGCAAGTTCACAGTTGTCTCCTTCATCTTGTGGGCACAGTCTT | + |
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Preference number: 1 (lower is better) Translates to: RSRPSSASLSPWTLD*ASSQLSPSSCGHSL Trigger: AAGACTGTGCCCACAAGATGAAGGAGACAACTGTGAACTTGCCCAATCTAAAGTCCAAGGAGACAGAGATGCAGAAGAGGGTCTTGACCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
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| 3UTR CCA 90 bp | GTGATCCATCTGAAAAGGTTGTCTGGCTGGTGTCAAAGGGCAAATTaGCCAACATGGAAGACACATTGGAAGCCACAGAGAATGAGGAGG | + |
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Preference number: 1 (lower is better) Translates to: VIHLKRLSGWCQRAN*PTWKTHWKPQRMRR Trigger: CCTCCTCATTCTCTGTGGCTTCCAATGTGTCTTCCATGTTGGCCAATTTGCCCTTTGACACCAGCCAGACAACCTTTTCAGATGGATCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
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| 3UTR GCA 90 bp | AGACAGTGTGGCATATTCAGGATTCATGAGATCTTCAAGGTTTTGTaGCCACAGGAGGGTGTCCAGTTGATTAGAGGAAACCGTGACAGG | + |
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Preference number: 1 (lower is better) Translates to: RQCGIFRIHEIFKVL*PQEGVQLIRGNRDR Trigger: CCTGTCACGGTTTCCTCTAATCAACTGGACACCCTCCTGTGGGCACAAAACCTTGAAGATCTCATGAATCCTGAATATGCCACACTGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
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| 3UTR GCA 90 bp | CTCAGACTAGGACTTTTAATCCCTACAAAGTTGAGCTTCTCCCTCTaGCCCGCCCCATCCTCACCAATAAACTTATATCTAGCTCTGGTC | + |
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Preference number: 1 (lower is better) Translates to: LRLGLLIPTKLSFSL*PAPSSPINLYLALV Trigger: GACCAGAGCTAGATATAAGTTTATTGGTGAGGATGGGGCGGGGCAGAGGGAGAAGCTCAACTTTGTAGGGATTAAAAGTCCTAGTCTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163574.8 ENSMUST00000174409.2 |
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| 3UTR CCA 90 bp | CAGCTATCTCCTCGGTCAAGACCCTCTTCTGCATCTCTGTCTCCTTaGACTTTAGATTGGGCAAGTTCACAGTTGTCTCCTTCATCTTGT | + |
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Preference number: 1 (lower is better) Translates to: QLSPRSRPSSASLSP*TLDWASSQLSPSSC Trigger: ACAAGATGAAGGAGACAACTGTGAACTTGCCCAATCTAAAGTCCAAGGAGACAGAGATGCAGAAGAGGGTCTTGACCGAGGAGATAGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
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| 3UTR TCA 90 bp | GGTGAGATGTGTTCAAGGAAGACAGTGTGGCATATTCAGGATTCATaGGATCTTCAAGGTTTTGTGCCCACAGGAGGGTGTCCAGTTGAT | + |
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Preference number: 1 (lower is better) Translates to: GEMCSRKTVWHIQDS*DLQGFVPTGGCPVD Trigger: ATCAACTGGACACCCTCCTGTGGGCACAAAACCTTGAAGATCTCATGAATCCTGAATATGCCACACTGTCTTCCTTGAACACATCTCACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
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| 3UTR CCA 90 bp | CCTGAGCGAGTGCTTGATTGGCTTGGTCAGCTTCATCTTGGTCTTTaGTTTATGAGAAGAGAATATTTTGCAAGGAAAGGTGGGATCAGC | + |
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Preference number: 1 (lower is better) Translates to: PERVLDWLGQLHLGL*FMRREYFARKGGIS Trigger: GCTGATCCCACCTTTCCTTGCAAAATATTCTCTTCTCATAAACCAAAGACCAAGATGAAGCTGACCAAGCCAATCAAGCACTCGCTCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
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| 3UTR CCA 90 bp | TCTGAGACCGGATATTTACAATTAGATGGTCCTTTTTGGTGTGCATaGCTTTCTGGGAATGTGCAGGTGCTTGTAGAAGCTTCTGATTCG | + |
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Preference number: 1 (lower is better) Translates to: SETGYLQLDGPFWCA*LSGNVQVLVEASDS Trigger: CGAATCAGAAGCTTCTACAAGCACCTGCACATTCCCAGAAAGCCATGCACACCAAAAAGGACCATCTAATTGTAAATATCCGGTCTCAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
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| 3UTR CCA 90 bp | TTGGATCCTTCTGAGACCGGATATTTACAATTAGATGGTCCTTTTTaGTGTGCATGGCTTTCTGGGAATGTGCAGGTGCTTGTAGAAGCT | + |
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Preference number: 1 (lower is better) Translates to: LDPSETGYLQLDGPF*CAWLSGNVQVLVEA Trigger: AGCTTCTACAAGCACCTGCACATTCCCAGAAAGCCATGCACACCAAAAAGGACCATCTAATTGTAAATATCCGGTCTCAGAAGGATCCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
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| 3UTR CCA 90 bp | GATTGTTCTATGACTACTACTTGTGATCCATCTGAAAAGGTTGTCTaGCTGGTGTCAAAGGGCAAATTGGCCAACATGGAAGACACATTG | + |
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Preference number: 1 (lower is better) Translates to: DCSMTTTCDPSEKVV*LVSKGKLANMEDTL Trigger: CAATGTGTCTTCCATGTTGGCCAATTTGCCCTTTGACACCAGCCAGACAACCTTTTCAGATGGATCACAAGTAGTAGTCATAGAACAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
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| 3UTR TCA 90 bp | GAGTGCTTGATTGGCTTGGTCAGCTTCATCTTGGTCTTTGGTTTATaGGAAGAGAATATTTTGCAAGGAAAGGTGGGATCAGCAACTTCA | + |
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Preference number: 1 (lower is better) Translates to: ECLIGLVSFILVFGL*EENILQGKVGSATS Trigger: TGAAGTTGCTGATCCCACCTTTCCTTGCAAAATATTCTCTTCTCATAAACCAAAGACCAAGATGAAGCTGACCAAGCCAATCAAGCACTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
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| 3UTR-3UTR TCA 90 bp | CTGCTTCTTGGTAGTGGCAAAGGGCAGATGCAGGGGCATGGTCTGGGCCCTCACGCTCACGTGTTTCTTTaGGCCTGTGGGTCTGGCCTT | + |
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Preference number: 2 (lower is better) Translates to: LLLGSGKGQMQGHGLGPHAHVFL*ACGSGL Trigger: AAGGCCAGACCCACAGGCTCAAAGAAACACGTGAGC...GTGAGGGCCCAGACCATGCCCCTGCATCTGCCCTTTGCCACTACCAAGAAGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
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| 3UTR-3UTR GCA 90 bp | CTGCTTCTTGGTAGTGGCAAAGGGCAGATGCAGGGGCATGGTCTGGGCCCTCACTTCAGGGGCATCCAGTaGCAGGAAATAATGACGGCC | + |
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Preference number: 2 (lower is better) Translates to: LLLGSGKGQMQGHGLGPHFRGIQ*QEIMTA Trigger: GGCCGTCATTATTTCCTGGCACTGGATGCCCCTGAA...GTGAGGGCCCAGACCATGCCCCTGCATCTGCCCTTTGCCACTACCAAGAAGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
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| 3UTR CAA 90 bp | AGGGCAGATGCAGGGGCATGGTCTGGGCCCTCACATCTACCACTGTaGTATTCTGCCCTCCCACTAACAGCACAGGTTCCTGTTTCCCTT | + |
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Preference number: 2 (lower is better) Translates to: RADAGAWSGPSHLPL*YSALPLTAQVPVSL Trigger: AAGGGAAACAGGAACCTGTGCTGTTAGTGGGAGGGCAGAATACAACAGTGGTAGATGTGAGGGCCCAGACCATGCCCCTGCATCTGCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
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| 3UTR CAA 90 bp | AAGGCCTCTTGGGTTTCGCTAATCAAGATCTCCTTGGACTGCTTCTaGGTAGTGGCAAAGGGCAGATGCAGGGGCATGGTCTGGGCCCTC | + |
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Preference number: 2 (lower is better) Translates to: KASWVSLIKISLDCF*VVAKGRCRGMVWAL Trigger: GAGGGCCCAGACCATGCCCCTGCATCTGCCCTTTGCCACTACCAAGAAGCAGTCCAAGGAGATCTTGATTAGCGAAACCCAAGAGGCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
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| 3UTR CAA 90 bp | GCTGGCTTCAGTCGCTGGTGTTTGGAGTTGGCCATGATCTTCATCTaGGCAAGGGCGAGCCCCTCTGCAGAGAAAGGCCTATTGTCCTCT | + |
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Preference number: 2 (lower is better) Translates to: AGFSRWCLELAMIFI*ARASPSAEKGLLSS Trigger: AGAGGACAATAGGCCTTTCTCTGCAGAGGGGCTCGCCCTTGCCAAGATGAAGATCATGGCCAACTCCAAACACCAGCGACTGAAGCCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
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| 3UTR CAA 90 bp | GGACACATGCAGCTTTGTGGGAAGACAGTGGGCTCACGTGTTTCTTaGAGCCTGTGGGTCTGGCCTTGTCTTTGGACTTCAGAAAGGAGG | + |
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Preference number: 2 (lower is better) Translates to: GHMQLCGKTVGSRVS*SLWVWPCLWTSERR Trigger: CCTCCTTTCTGAAGTCCAAAGACAAGGCCAGACCCACAGGCTCAAAGAAACACGTGAGCCCACTGTCTTCCCACAAAGCTGCATGTGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
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| 3UTR-3UTR CCA 90 bp | ACTCTGCGCCTTACAGTCGGGGTACACAGCACCCTGCTGGCCTTGGCCTCATTGATCAGAGCAGGCATGTaGATAGGACTTGGTTTTTGT | + |
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Preference number: 2 (lower is better) Translates to: TLRLTVGVHSTLLALASLIRAGM*IGLGFC Trigger: ACAAAAACCAAGTCCTATCCACATGCCTGCTCTGAT...CAATGAGGCCAAGGCCAGCAGGGTGCTGTGTACCCCGACTGTAAGGCGCAGAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
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| 3UTR CAA 90 bp | GTCTGGCTGGTGTCAAAGGGCAAATTGGCCAACATGGAAGACACATaGGAAGCCACAGAGAATGAGGAGGGCAGAGAGATAGTAGCTGGC | + |
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Preference number: 2 (lower is better) Translates to: VWLVSKGKLANMEDT*EATENEEGREIVAG Trigger: GCCAGCTACTATCTCTCTGCCCTCCTCATTCTCTGTGGCTTCCAATGTGTCTTCCATGTTGGCCAATTTGCCCTTTGACACCAGCCAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
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| 3UTR-3UTR CCA 90 bp | AAGGGCAAATTGGCCAACATGGAAGACACATTGGAAGCCACAGAGAATGAGGAGTCTTCCGAGACGGAGTaGGAAGGGCTGAGGCCATCT | + |
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Preference number: 2 (lower is better) Translates to: KGKLANMEDTLEATENEESSETE*EGLRPS Trigger: AGATGGCCTCAGCCCTTCCCACTCCGTCTCGGAAGA...CTCCTCATTCTCTGTGGCTTCCAATGTGTCTTCCATGTTGGCCAATTTGCCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
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| 3UTR-3UTR CCA 90 bp | TGGACTTTAGATTGGGCAAGTTCACAGTTGTCTCCTTCATCTTGTGGGCACAGTAGGGCTGCCCAGGGGTaGTTGGGGTCTTCTGGGAAA | + |
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Preference number: 2 (lower is better) Translates to: WTLDWASSQLSPSSCGHSRAAQG*LGSSGK Trigger: TTTCCCAGAAGACCCCAACCACCCCTGGGCAGCCCT...ACTGTGCCCACAAGATGAAGGAGACAACTGTGAACTTGCCCAATCTAAAGTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
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| 3UTR-3UTR CCA 90 bp | AAGGGCGAGCCCCTCTGCAGAGAAAGGCCTATTGTCCTCTGTGTAGGGGTTCTCGGTACCTTGTTAGACTaGTCCAAAATGAATGGCATT | + |
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Preference number: 2 (lower is better) Translates to: KGEPLCRERPIVLCVGVLGTLLD*SKMNGI Trigger: AATGCCATTCATTTTGGACCAGTCTAACAAGGTACC...GAGAACCCCTACACAGAGGACAATAGGCCTTTCTCTGCAGAGGGGCTCGCCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
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| 3UTR CAA 90 bp | TCGGTCAAGACCCTCTTCTGCATCTCTGTCTCCTTGGACTTTAGATaGGGCAAGTTCACAGTTGTCTCCTTCATCTTGTGGGCACAGTCT | + |
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Preference number: 2 (lower is better) Translates to: SVKTLFCISVSLDFR*GKFTVVSFILWAQS Trigger: AGACTGTGCCCACAAGATGAAGGAGACAACTGTGAACTTGCCCAATCTAAAGTCCAAGGAGACAGAGATGCAGAAGAGGGTCTTGACCGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
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| 3UTR CAA 90 bp | TTTGCAAGGAAAGGTGGGATCAGCAACTTCAACTGTAAGTTTGCCTaGAGACTGGACCTGAAAGTGCCAAGTGGAGGCAAGAGTGACTTC | + |
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Preference number: 2 (lower is better) Translates to: FARKGGISNFNCKFA*RLDLKVPSGGKSDF Trigger: GAAGTCACTCTTGCCTCCACTTGGCACTTTCAGGTCCAGTCTCAAGGCAAACTTACAGTTGAAGTTGCTGATCCCACCTTTCCTTGCAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
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| 3UTR CAA 90 bp | GGAAGACAGTGTGGCATATTCAGGATTCATGAGATCTTCAAGGTTTaGTGCCCACAGGAGGGTGTCCAGTTGATTAGAGGAAACCGTGAC | + |
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Preference number: 2 (lower is better) Translates to: GRQCGIFRIHEIFKV*CPQEGVQLIRGNRD Trigger: GTCACGGTTTCCTCTAATCAACTGGACACCCTCCTGTGGGCACAAAACCTTGAAGATCTCATGAATCCTGAATATGCCACACTGTCTTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
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| 3UTR CAA 90 bp | TGTGATCCATCTGAAAAGGTTGTCTGGCTGGTGTCAAAGGGCAAATaGGCCAACATGGAAGACACATTGGAAGCCACAGAGAATGAGGAG | + |
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Preference number: 2 (lower is better) Translates to: CDPSEKVVWLVSKGK*ANMEDTLEATENEE Trigger: CTCCTCATTCTCTGTGGCTTCCAATGTGTCTTCCATGTTGGCCAATTTGCCCTTTGACACCAGCCAGACAACCTTTTCAGATGGATCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
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| 3UTR-3UTR TCA 90 bp | CCCCGCCCCATCCTCACCAATAAACTTATATCTAGCTCTGGTCTCTATGGGAGATGGGAAACAGAAGGCTaGGACTTAAAGAAATGGCCA | + |
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Preference number: 2 (lower is better) Translates to: PRPILTNKLISSSGLYGRWETEG*DLKKWP Trigger: TGGCCATTTCTTTAAGTCTCAGCCTTCTGTTTCCCA...TCTCCCATAGAGACCAGAGCTAGATATAAGTTTATTGGTGAGGATGGGGCGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
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| 3UTR-3UTR CCA 90 bp | CTCTTCTGCATCTCTGTCTCCTTGGACTTTAGATTGGGCAAGTTCACAGTTGTCGTTTCTTTGAGCCTGTaGGTCTGGCCTTGTCTTTGG | + |
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Preference number: 2 (lower is better) Translates to: LFCISVSLDFRLGKFTVVVSLSL*VWPCLW Trigger: CCAAAGACAAGGCCAGACCCACAGGCTCAAAGAAAC...GACAACTGTGAACTTGCCCAATCTAAAGTCCAAGGAGACAGAGATGCAGAAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
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| 3UTR CAA 90 bp | GTTTCCATTAGACGACCCTGGCTTGTGTCTTCCTCAGAATCAGATTaGTGGGCCTGGTTTATCGTGTTAGAGATGATGCTGAAGATGGTC | + |
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Preference number: 2 (lower is better) Translates to: VSIRRPWLVSSSESD*WAWFIVLEMMLKMV Trigger: GACCATCTTCAGCATCATCTCTAACACGATAAACCAGGCCCACAAATCTGATTCTGAGGAAGACACAAGCCAGGGTCGTCTAATGGAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
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| 3UTR CAA 90 bp | TCTGCATCTCTGTCTCCTTGGACTTTAGATTGGGCAAGTTCACAGTaGTCTCCTTCATCTTGTGGGCACAGTCTTCTAACTTTTCCCTGC | + |
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Preference number: 2 (lower is better) Translates to: SASLSPWTLDWASSQ*SPSSCGHSLLTFPC Trigger: GCAGGGAAAAGTTAGAAGACTGTGCCCACAAGATGAAGGAGACAACTGTGAACTTGCCCAATCTAAAGTCCAAGGAGACAGAGATGCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
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| 3UTR-3UTR CCA 90 bp | CCCCGCCCCATCCTCACCAATAAACTTATATCTAGCTCTGGTCTCTATGGGAGATTTTGCAAGGAAAGGTaGGATCAGCAACTTCAACTG | + |
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Preference number: 2 (lower is better) Translates to: PRPILTNKLISSSGLYGRFCKER*DQQLQL Trigger: CAGTTGAAGTTGCTGATCCCACCTTTCCTTGCAAAA...TCTCCCATAGAGACCAGAGCTAGATATAAGTTTATTGGTGAGGATGGGGCGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
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| 3UTR-3UTR CCA 90 bp | GGTTTCGCTAATCAAGATCTCCTTGGACTGCTTCTTGGTAGTGGCAAAGGGCAGCTGGTCCAAAATGAATaGCATTTTCCTCGATTCGAT | + |
|
Preference number: 2 (lower is better) Translates to: GFANQDLLGLLLGSGKGQLVQNE*HFPRFD Trigger: ATCGAATCGAGGAAAATGCCATTCATTTTGGACCAG...CTGCCCTTTGCCACTACCAAGAAGCAGTCCAAGGAGATCTTGATTAGCGAAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
||
| 3UTR-3UTR CCA 90 bp | GTCTCCTTGGACTTTAGATTGGGCAAGTTCACAGTTGTCTCCTTCATCTTGTGGTGGTCAGCTTCATCTTaGTCTTTGGTTTATGAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: VSLDFRLGKFTVVSFILWWSASS*SLVYEK Trigger: CTTCTCATAAACCAAAGACCAAGATGAAGCTGACCA...CCACAAGATGAAGGAGACAACTGTGAACTTGCCCAATCTAAAGTCCAAGGAGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
||
| 3UTR TCA 72 bp | TGCAGTCGGGGTCTTCCGAGACGGAGTGGGAAGGGCTaGGGCCATCTGAGCTGGAGCAGGCTTAGCCGGTAC | + |
|
Preference number: 3 (lower is better) Translates to: CSRGLPRRSGKG*GHLSWSRLSRY Trigger: GTACCGGCTAAGCCTGCTCCAGCTCAGATGGCCTCAGCCCTTCCCACTCCGTCTCGGAAGACCCCGACTGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
||
| 3UTR TCA 72 bp | GTCTTCCGAGACGGAGTGGGAAGGGCTGAGGCCATCTaGGCTGGAGCAGGCTTAGCCGGTACCTTGTTAGAC | + |
|
Preference number: 3 (lower is better) Translates to: VFRDGVGRAEAI*AGAGLAGTLLD Trigger: GTCTAACAAGGTACCGGCTAAGCCTGCTCCAGCTCAGATGGCCTCAGCCCTTCCCACTCCGTCTCGGAAGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGGGATCCCCAGAGGCCTTTGCCCGGGAGTTGAGAGCTTTCTGGTACGGGGCATTAGACGACCCTGGCTaGTGTCTTCCTCAGAATCAG | + |
|
Preference number: 3 (lower is better) Translates to: LGSPEAFARELRAFWYGALDDPG*CLPQNQ Trigger: CTGATTCTGAGGAAGACACAAGCCAGGGTCGTCTAA...TGCCCCGTACCAGAAAGCTCTCAACTCCCGGGCAAAGGCCTCTGGGGATCCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
||
| 3UTR TCA 72 bp | TGTGACCAGATGAGAGGCACAGAGTCACCCACAGCCTaGGACCTGAGCGAGTGCTTGATTGGCTTGGTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: CDQMRGTESPTA*DLSECLIGLVS Trigger: GCTGACCAAGCCAATCAAGCACTCGCTCAGGTCTCAGGCTGTGGGTGACTCTGTGCCTCTCATCTGGTCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
||
| 3UTR TCA 72 bp | GAGACTGGACCTGAAAGTGCCAAGTGGAGGCAAGAGTaGCTTCTGGGGGTATTTCCAGCACGGAGGGTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: ETGPESAKWRQE*LLGVFPARRVL Trigger: CAGAACCCTCCGTGCTGGAAATACCCCCAGAAGTCACTCTTGCCTCCACTTGGCACTTTCAGGTCCAGTCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
||
| 3UTR CCA 72 bp | TTGGTAGTGGCAAAGGGCAGATGCAGGGGCATGGTCTaGGCCCTCACATCTACCACTGTTGTATTCTGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: LVVAKGRCRGMV*ALTSTTVVFCP Trigger: AGGGCAGAATACAACAGTGGTAGATGTGAGGGCCCAGACCATGCCCCTGCATCTGCCCTTTGCCACTACCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
||
| 3UTR-3UTR CAA 90 bp | ACTCTGCGCCTTACAGTCGGGGTACACAGCACCCTGCTGGCCTTGGCCTCATTGAACTGTAAGTTTGCCTaGAGACTGGACCTGAAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: TLRLTVGVHSTLLALASLNCKFA*RLDLKV Trigger: CACTTTCAGGTCCAGTCTCAAGGCAAACTTACAGTT...CAATGAGGCCAAGGCCAGCAGGGTGCTGTGTACCCCGACTGTAAGGCGCAGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCTCGGTCAAGACCCTCTTCTGCATCTCTGTCTCCTTGGACTTTAGATTGGGCTCTGGTACGGGGCAGTaGGATCCTTCTGAGACCGGA | + |
|
Preference number: 3 (lower is better) Translates to: SSVKTLFCISVSLDFRLGSGTGQ*DPSETG Trigger: TCCGGTCTCAGAAGGATCCAACTGCCCCGTACCAGA...GCCCAATCTAAAGTCCAAGGAGACAGAGATGCAGAAGAGGGTCTTGACCGAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
||
| 3UTR TCA 72 bp | CCAGGGGTGGTTGGGGTCTTCTGGGAAACAGAAGGCTaGGACTTAAAGAAATGGCCAAGTGCACCTGAAGCC | + |
|
Preference number: 3 (lower is better) Translates to: PGVVGVFWETEG*DLKKWPSAPEA Trigger: GGCTTCAGGTGCACTTGGCCATTTCTTTAAGTCTCAGCCTTCTGTTTCCCAGAAGACCCCAACCACCCCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
||
| 3UTR GCA 72 bp | AAACAGAAAGGCCAGCTCATGTTCAGGGGCATCCAGTaGCAGGAAATAATGACGGCCGGATCTCAGACGCAG | + |
|
Preference number: 3 (lower is better) Translates to: KQKGQLMFRGIQ*QEIMTAGSQTQ Trigger: CTGCGTCTGAGATCCGGCCGTCATTATTTCCTGGCACTGGATGCCCCTGAACATGAGCTGGCCTTTCTGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
||
| 3UTR GCA 72 bp | GCCTCTTGGGTTTCGCTAATCAAGATCTCCTTGGACTaGTTCTTGGTAGTGGCAAAGGGCAGATGCAGGGGC | + |
|
Preference number: 3 (lower is better) Translates to: ASWVSLIKISLD*FLVVAKGRCRG Trigger: GCCCCTGCATCTGCCCTTTGCCACTACCAAGAAGCAGTCCAAGGAGATCTTGATTAGCGAAACCCAAGAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
||
| 3UTR GCA 72 bp | ACTGGCAAGTCCTCTGCAGGCTTCCTCTCCATCTGGTaGCGTGTGTTCTCCGTGTTCACTTTAGTACAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: TGKSSAGFLSIW*RVFSVFTLVQD Trigger: GTCCTGTACTAAAGTGAACACGGAGAACACACGGCACCAGATGGAGAGGAAGCCTGCAGAGGACTTGCCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
||
| 3UTR CCA 72 bp | GGGAAGACAGTGGGCTCACGTGTTTCTTTGAGCCTGTaGGTCTGGCCTTGTCTTTGGACTTCAGAAAGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: GKTVGSRVSLSL*VWPCLWTSERR Trigger: CCTCCTTTCTGAAGTCCAAAGACAAGGCCAGACCCACAGGCTCAAAGAAACACGTGAGCCCACTGTCTTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
||
| 3UTR-3UTR CAA 90 bp | GTCTCCTTGGACTTTAGATTGGGCAAGTTCACAGTTGTCTCCTTCATCTTGTGGGCTGCCCAGGGGTGGTaGGGGTCTTCTGGGAAACAG | + |
|
Preference number: 3 (lower is better) Translates to: VSLDFRLGKFTVVSFILWAAQGW*GSSGKQ Trigger: CTGTTTCCCAGAAGACCCCAACCACCCCTGGGCAGC...CCACAAGATGAAGGAGACAACTGTGAACTTGCCCAATCTAAAGTCCAAGGAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
||
| 3UTR TCA 72 bp | AGCTTTGTGGGAAGACAGTGGGCTCACGTGTTTCTTTaGGCCTGTGGGTCTGGCCTTGTCTTTGGACTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: SFVGRQWAHVFL*ACGSGLVFGLQ Trigger: CTGAAGTCCAAAGACAAGGCCAGACCCACAGGCTCAAAGAAACACGTGAGCCCACTGTCTTCCCACAAAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
||
| 3UTR GCA 72 bp | TTAAATCCTTGGGTTGCTGCTTACTGGCAAGTCCTCTaGAGGCTTCCTCTCCATCTGGTGCCGTGTGTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: LNPWVAAYWQVL*RLPLHLVPCVL Trigger: GAGAACACACGGCACCAGATGGAGAGGAAGCCTGCAGAGGACTTGCCAGTAAGCAGCAACCCAAGGATTTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
||
| 3UTR CCA 72 bp | ACAGTGGGCTCACGTGTTTCTTTGAGCCTGTGGGTCTaGCCTTGTCTTTGGACTTCAGAAAGGAGGGATTGG | + |
|
Preference number: 3 (lower is better) Translates to: TVGSRVSLSLWV*PCLWTSERRDW Trigger: CCAATCCCTCCTTTCTGAAGTCCAAAGACAAGGCCAGACCCACAGGCTCAAAGAAACACGTGAGCCCACTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
||
| 3UTR TCA 72 bp | TGTGACTTGCATCTGATCCTCAGAAGATTGCAGTTGTaGCCAGATGAGAGGCACAGAGTCACCCACAGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: CDLHLILRRLQL*PDERHRVTHSL Trigger: CAGGCTGTGGGTGACTCTGTGCCTCTCATCTGGTCACAACTGCAATCTTCTGAGGATCAGATGCAAGTCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
||
| 3UTR CCA 72 bp | GTCACCCACAGCCTGAGACCTGAGCGAGTGCTTGATTaGCTTGGTCAGCTTCATCTTGGTCTTTGGTTTATG | + |
|
Preference number: 3 (lower is better) Translates to: VTHSLRPERVLD*LGQLHLGLWFM Trigger: CATAAACCAAAGACCAAGATGAAGCTGACCAAGCCAATCAAGCACTCGCTCAGGTCTCAGGCTGTGGGTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
||
| 3UTR TCA 72 bp | TCTTCAAGGTTTTGTGCCCACAGGAGGGTGTCCAGTTaGTTAGAGGAAACCGTGACAGGAAAACCAGTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: SSRFCAHRRVSS*LEETVTGKPVL Trigger: CAGCACTGGTTTTCCTGTCACGGTTTCCTCTAATCAACTGGACACCCTCCTGTGGGCACAAAACCTTGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
||
| 3UTR CCA 72 bp | CGTGTTTCTTTGAGCCTGTGGGTCTGGCCTTGTCTTTaGACTTCAGAAAGGAGGGATTGGGAGGAAAGATGT | + |
|
Preference number: 3 (lower is better) Translates to: RVSLSLWVWPCL*TSERRDWEERC Trigger: ACATCTTTCCTCCCAATCCCTCCTTTCTGAAGTCCAAAGACAAGGCCAGACCCACAGGCTCAAAGAAACACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
||
| 3UTR CCA 72 bp | CCTCGGTCAAGACCCTCTTCTGCATCTCTGTCTCCTTaGACTTTAGATTGGGCAAGTTCACAGTTGTCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: PRSRPSSASLSP*TLDWASSQLSP Trigger: AGGAGACAACTGTGAACTTGCCCAATCTAAAGTCCAAGGAGACAGAGATGCAGAAGAGGGTCTTGACCGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
||
| 3UTR CCA 72 bp | TTGTCTGGCTGGTGTCAAAGGGCAAATTGGCCAACATaGAAGACACATTGGAAGCCACAGAGAATGAGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: LSGWCQRANWPT*KTHWKPQRMRR Trigger: CCTCCTCATTCTCTGTGGCTTCCAATGTGTCTTCCATGTTGGCCAATTTGCCCTTTGACACCAGCCAGACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCTTGGACTTTAGATTGGGCAAGTTCACAGTTGTCTCCTTCATCTTGTGGGCACAGGAGGGTGTCCAGTaGATTAGAGGAAACCGTGAC | + |
|
Preference number: 3 (lower is better) Translates to: SLDFRLGKFTVVSFILWAQEGVQ*IRGNRD Trigger: GTCACGGTTTCCTCTAATCAACTGGACACCCTCCTG...TGCCCACAAGATGAAGGAGACAACTGTGAACTTGCCCAATCTAAAGTCCAAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
||
| 3UTR GCA 72 bp | TTCTCAACAGCTATCTCCTCGGTCAAGACCCTCTTCTaGATCTCTGTCTCCTTGGACTTTAGATTGGGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: FSTAISSVKTLF*ISVSLDFRLGK Trigger: CTTGCCCAATCTAAAGTCCAAGGAGACAGAGATGCAGAAGAGGGTCTTGACCGAGGAGATAGCTGTTGAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
||
| 3UTR CCA 72 bp | CGACCCTGGCTTGTGTCTTCCTCAGAATCAGATTTGTaGGCCTGGTTTATCGTGTTAGAGATGATGCTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: RPWLVSSSESDL*AWFIVLEMMLK Trigger: CTTCAGCATCATCTCTAACACGATAAACCAGGCCCACAAATCTGATTCTGAGGAAGACACAAGCCAGGGTCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
||
| 3UTR CCA 72 bp | GAAAGGCACTTTGAAGGAGTTTCCATTAGACGACCCTaGCTTGTGTCTTCCTCAGAATCAGATTTGTGGGCC | + |
|
Preference number: 3 (lower is better) Translates to: ERHFEGVSIRRP*LVSSSESDLWA Trigger: GGCCCACAAATCTGATTCTGAGGAAGACACAAGCCAGGGTCGTCTAATGGAAACTCCTTCAAAGTGCCTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
||
| 3UTR CCA 72 bp | CAGTCTTCTAACTTTTCCCTGCCCTTCAAGGCCTCTTaGGTTTCGCTAATCAAGATCTCCTTGGACTGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: QSSNFSLPFKAS*VSLIKISLDCF Trigger: GAAGCAGTCCAAGGAGATCTTGATTAGCGAAACCCAAGAGGCCTTGAAGGGCAGGGAAAAGTTAGAAGACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
||
| 3UTR CCA 72 bp | CCCTCTTCTGCATCTCTGTCTCCTTGGACTTTAGATTaGGCAAGTTCACAGTTGTCTCCTTCATCTTGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: PSSASLSPWTLD*ASSQLSPSSCG Trigger: CCCACAAGATGAAGGAGACAACTGTGAACTTGCCCAATCTAAAGTCCAAGGAGACAGAGATGCAGAAGAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
||
| 3UTR CCA 72 bp | CTGAAAAGGTTGTCTGGCTGGTGTCAAAGGGCAAATTaGCCAACATGGAAGACACATTGGAAGCCACAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: LKRLSGWCQRAN*PTWKTHWKPQR Trigger: TCTCTGTGGCTTCCAATGTGTCTTCCATGTTGGCCAATTTGCCCTTTGACACCAGCCAGACAACCTTTTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
||
| 3UTR GCA 72 bp | GAGTCTCCTGCATTATGTTATCTTAAATCCTTGGGTTaGTGCTTACTGGCAAGTCCTCTGCAGGCTTCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: ESPALCYLKSLG*CLLASPLQASS Trigger: AGAGGAAGCCTGCAGAGGACTTGCCAGTAAGCAGCAACCCAAGGATTTAAGATAACATAATGCAGGAGACTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
||
| 3UTR CCA 72 bp | CATTATGTTATCTTAAATCCTTGGGTTGCTGCTTACTaGCAAGTCCTCTGCAGGCTTCCTCTCCATCTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: HYVILNPWVAAY*QVLCRLPLHLV Trigger: CACCAGATGGAGAGGAAGCCTGCAGAGGACTTGCCAGTAAGCAGCAACCCAAGGATTTAAGATAACATAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
||
| 3UTR-3UTR CAA 90 bp | GATTTGTGGGCCTGGTTTATCGTGTTAGAGATGATGCTGAAGATGGTCCGGATGCTTGGTTTTTGTGACTaGCATCTGATCCTCAGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: DLWAWFIVLEMMLKMVRMLGFCD*HLILRR Trigger: TCTTCTGAGGATCAGATGCAAGTCACAAAAACCAAG...CATCCGGACCATCTTCAGCATCATCTCTAACACGATAAACCAGGCCCACAAATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGGGCAAATTGGCCAACATGGAAGACACATTGGAAGCCACAGAGAATGAGGAGTCTGAGAAAGGCACTTaGAAGGAGTTTCCATTAGAC | + |
|
Preference number: 3 (lower is better) Translates to: KGKLANMEDTLEATENEESEKGT*KEFPLD Trigger: GTCTAATGGAAACTCCTTCAAAGTGCCTTTCTCAGA...CTCCTCATTCTCTGTGGCTTCCAATGTGTCTTCCATGTTGGCCAATTTGCCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
||
| 3UTR GCA 72 bp | GGCATATTCAGGATTCATGAGATCTTCAAGGTTTTGTaGCCACAGGAGGGTGTCCAGTTGATTAGAGGAAAC | + |
|
Preference number: 3 (lower is better) Translates to: GIFRIHEIFKVL*PQEGVQLIRGN Trigger: GTTTCCTCTAATCAACTGGACACCCTCCTGTGGGCACAAAACCTTGAAGATCTCATGAATCCTGAATATGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
||
| 3UTR GCA 72 bp | GGACTTTTAATCCCTACAAAGTTGAGCTTCTCCCTCTaGCCCGCCCCATCCTCACCAATAAACTTATATCTA | + |
|
Preference number: 3 (lower is better) Translates to: GLLIPTKLSFSL*PAPSSPINLYL Trigger: TAGATATAAGTTTATTGGTGAGGATGGGGCGGGGCAGAGGGAGAAGCTCAACTTTGTAGGGATTAAAAGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163574.8 ENSMUST00000174409.2 |
||
| 3UTR CCA 72 bp | TGGCTTGTGTCTTCCTCAGAATCAGATTTGTGGGCCTaGTTTATCGTGTTAGAGATGATGCTGAAGATGGTC | + |
|
Preference number: 3 (lower is better) Translates to: WLVSSSESDLWA*FIVLEMMLKMV Trigger: GACCATCTTCAGCATCATCTCTAACACGATAAACCAGGCCCACAAATCTGATTCTGAGGAAGACACAAGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
||
| 3UTR CCA 72 bp | AGATCGAGTCTCCTGCATTATGTTATCTTAAATCCTTaGGTTGCTGCTTACTGGCAAGTCCTCTGCAGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: RSSLLHYVILNP*VAAYWQVLCRL Trigger: AAGCCTGCAGAGGACTTGCCAGTAAGCAGCAACCCAAGGATTTAAGATAACATAATGCAGGAGACTCGATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
||
| 3UTR TCA 72 bp | TATCAGAGCAGGCATGTGGATAGGACTTGGTTTTTGTaGCTTGCATCTGATCCTCAGAAGATTGCAGTTGTG | + |
|
Preference number: 3 (lower is better) Translates to: YQSRHVDRTWFL*LASDPQKIAVV Trigger: CACAACTGCAATCTTCTGAGGATCAGATGCAAGTCACAAAAACCAAGTCCTATCCACATGCCTGCTCTGATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
||
| 3UTR TCA 72 bp | TTAGAGGAAACCGTGACAGGAAAACCAGTGCTGTTCTaGGAAAGGCACTTTGAAGGAGTTTCCATTAGACGA | + |
|
Preference number: 3 (lower is better) Translates to: LEETVTGKPVLF*ERHFEGVSIRR Trigger: TCGTCTAATGGAAACTCCTTCAAAGTGCCTTTCTCAGAACAGCACTGGTTTTCCTGTCACGGTTTCCTCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
||
| 3UTR TCA 72 bp | TTGAGAGCTTTCTGGTACGGGGCAGTTGGATCCTTCTaGGACCGGATATTTACAATTAGATGGTCCTTTTTG | + |
|
Preference number: 3 (lower is better) Translates to: LRAFWYGAVGSF*DRIFTIRWSFL Trigger: CAAAAAGGACCATCTAATTGTAAATATCCGGTCTCAGAAGGATCCAACTGCCCCGTACCAGAAAGCTCTCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
||
| 3UTR GCA 72 bp | GACCGGATATTTACAATTAGATGGTCCTTTTTGGTGTaGATGGCTTTCTGGGAATGTGCAGGTGCTTGTAGA | + |
|
Preference number: 3 (lower is better) Translates to: DRIFTIRWSFLV*MAFWECAGACR Trigger: TCTACAAGCACCTGCACATTCCCAGAAAGCCATGCACACCAAAAAGGACCATCTAATTGTAAATATCCGGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
||
| 3UTR CCA 72 bp | ATGACTACTACTTGTGATCCATCTGAAAAGGTTGTCTaGCTGGTGTCAAAGGGCAAATTGGCCAACATGGAA | + |
|
Preference number: 3 (lower is better) Translates to: MTTTCDPSEKVV*LVSKGKLANME Trigger: TTCCATGTTGGCCAATTTGCCCTTTGACACCAGCCAGACAACCTTTTCAGATGGATCACAAGTAGTAGTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
||
| 3UTR CCA 72 bp | GGATATTTACAATTAGATGGTCCTTTTTGGTGTGCATaGCTTTCTGGGAATGTGCAGGTGCTTGTAGAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: GYLQLDGPFWCA*LSGNVQVLVEA Trigger: AGCTTCTACAAGCACCTGCACATTCCCAGAAAGCCATGCACACCAAAAAGGACCATCTAATTGTAAATATCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
||
| CDS-3UTR TCA 90 bp | AGCACTCTGCGCCTTACAGTCGGGGTACACAGCACCCTGCTGGCCTTGGCCTCAAGGGCTGAGGCCATCTaGGCTGGAGCAGGCTTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: STLRLTVGVHSTLLALASRAEAI*AGAGLA Trigger: GGCTAAGCCTGCTCCAGCTCAGATGGCCTCAGCCCT...TGAGGCCAAGGCCAGCAGGGTGCTGTGTACCCCGACTGTAAGGCGCAGAGTGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174409.2 |
||
| CDS-3UTR CCA 90 bp | CAGCACTCTGCGCCTTACAGTCGGGGTACACAGCACCCTGCTGGCCTTGGCCTCTGCAGGGGCATGGTCTaGGCCCTCACATCTACCACT | + |
|
Preference number: 4 (lower is better) Translates to: QHSAPYSRGTQHPAGLGLCRGMV*ALTSTT Trigger: AGTGGTAGATGTGAGGGCCCAGACCATGCCCCTGCA...GAGGCCAAGGCCAGCAGGGTGCTGTGTACCCCGACTGTAAGGCGCAGAGTGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174409.2 |
||
| CDS-3UTR CCA 90 bp | TCTGCGCCTTACAGTCGGGGTACACAGCACCCTGCTGGCCTTGGCCTCATTGGTAGTTACTCTCGAACATaGGCAGCGGGCGGAGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SAPYSRGTQHPAGLGLIGSYSRT*AAGGGA Trigger: TGCCCCTCCGCCCGCTGCCCATGTTCGAGAGTAACT...ACCAATGAGGCCAAGGCCAGCAGGGTGCTGTGTACCCCGACTGTAAGGCGCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163574.8 ENSMUST00000174409.2 |
||
| CDS-3UTR TCA 90 bp | CTCTGCGCCTTACAGTCGGGGTACACAGCACCCTGCTGGCCTTGGCCTCATTGGGCTCACGTGTTTCTTTaGGCCTGTGGGTCTGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LCALQSGYTAPCWPWPHWAHVFL*ACGSGL Trigger: AAGGCCAGACCCACAGGCTCAAAGAAACACGTGAGC...CCAATGAGGCCAAGGCCAGCAGGGTGCTGTGTACCCCGACTGTAAGGCGCAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174409.2 |
||
| CDS-3UTR CCA 90 bp | CTTACAGTCGGGGTACACAGCACCCTGCTGGCCTTGGCCTCATTGGTCTTCTGGAGTTACTCTCGAACATaGGCAGCGGGCGGAGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LTVGVHSTLLALASLVFWSYSRT*AAGGGA Trigger: TGCCCCTCCGCCCGCTGCCCATGTTCGAGAGTAACT...CCAGAAGACCAATGAGGCCAAGGCCAGCAGGGTGCTGTGTACCCCGACTGTAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163574.8 ENSMUST00000174409.2 |
||
| CDS-3UTR CCA 90 bp | CACTCTGCGCCTTACAGTCGGGGTACACAGCACCCTGCTGGCCTTGGCCTCATTTCTTCCGAGACGGAGTaGGAAGGGCTGAGGCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: HSAPYSRGTQHPAGLGLISSETE*EGLRPS Trigger: AGATGGCCTCAGCCCTTCCCACTCCGTCTCGGAAGA...AATGAGGCCAAGGCCAGCAGGGTGCTGTGTACCCCGACTGTAAGGCGCAGAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174409.2 |
||
| CDS-3UTR CCA 90 bp | TCAGCACTCTGCGCCTTACAGTCGGGGTACACAGCACCCTGCTGGCCTTGGCCTCTCCCTGTAATGTCCTaGGATCCCCAGAGGCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SALCALQSGYTAPCWPWPLPVMS*DPQRPL Trigger: CAAAGGCCTCTGGGGATCCCAGGACATTACAGGGAG...AGGCCAAGGCCAGCAGGGTGCTGTGTACCCCGACTGTAAGGCGCAGAGTGCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174409.2 |
||
| CDS-3UTR CCA 90 bp | TCAGCACTCTGCGCCTTACAGTCGGGGTACACAGCACCCTGCTGGCCTTGGCCTGCTGGCTTCAGTCGCTaGTGTTTGGAGTTGGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: SALCALQSGYTAPCWPWPAGFSR*CLELAM Trigger: CATGGCCAACTCCAAACACCAGCGACTGAAGCCAGC...AGGCCAAGGCCAGCAGGGTGCTGTGTACCCCGACTGTAAGGCGCAGAGTGCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174409.2 |
||
| CDS-3UTR GCA 90 bp | CACTCTGCGCCTTACAGTCGGGGTACACAGCACCCTGCTGGCCTTGGCCTCATTGCCAGGCAAGGATGCTaGGACACCCATAGTCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: HSAPYSRGTQHPAGLGLIARQGC*DTHSQL Trigger: AAGCTGACTATGGGTGTCGCAGCATCCTTGCCTGGC...AATGAGGCCAAGGCCAGCAGGGTGCTGTGTACCCCGACTGTAAGGCGCAGAGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163574.8 ENSMUST00000174409.2 |
||
| CDS-3UTR TCA 90 bp | GCACTCTGCGCCTTACAGTCGGGGTACACAGCACCCTGCTGGCCTTGGCCTCATAGGAGGGTGTCCAGTTaGTTAGAGGAAACCGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: ALCALQSGYTAPCWPWPHRRVSS*LEETVT Trigger: TGTCACGGTTTCCTCTAATCAACTGGACACCCTCCT...ATGAGGCCAAGGCCAGCAGGGTGCTGTGTACCCCGACTGTAAGGCGCAGAGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174409.2 |
||
| CDS-3UTR TCA 90 bp | TCAGCACTCTGCGCCTTACAGTCGGGGTACACAGCACCCTGCTGGCCTTGGCCTGTTTGGAGTTGGCCATaGTCTTCATCTTGGCAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SALCALQSGYTAPCWPWPVWSWP*SSSWQG Trigger: CCCTTGCCAAGATGAAGATCATGGCCAACTCCAAAC...AGGCCAAGGCCAGCAGGGTGCTGTGTACCCCGACTGTAAGGCGCAGAGTGCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174409.2 |
||
| CDS-3UTR GCA 90 bp | GCACTCTGCGCCTTACAGTCGGGGTACACAGCACCCTGCTGGCCTTGGCCTCATTTCGATGGGGACACATaGAGCTTTGTGGGAAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: ALCALQSGYTAPCWPWPHFDGDT*SFVGRQ Trigger: CTGTCTTCCCACAAAGCTGCATGTGTCCCCATCGAA...ATGAGGCCAAGGCCAGCAGGGTGCTGTGTACCCCGACTGTAAGGCGCAGAGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174409.2 |
||
| CDS-3UTR GCA 90 bp | GCACTCTGCGCCTTACAGTCGGGGTACACAGCACCCTGCTGGCCTTGGCCTCATCTTCTAACTTTTCCCTaGCCTTCAAGGCCTCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: ALCALQSGYTAPCWPWPHLLTFP*PSRPLG Trigger: CCCAAGAGGCCTTGAAGGGCAGGGAAAAGTTAGAAG...ATGAGGCCAAGGCCAGCAGGGTGCTGTGTACCCCGACTGTAAGGCGCAGAGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174409.2 |
||
| CDS-3UTR CCA 90 bp | TCAGCACTCTGCGCCTTACAGTCGGGGTACACAGCACCCTGCTGGCCTTGGCCTGTTTCTTTGAGCCTGTaGGTCTGGCCTTGTCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SALCALQSGYTAPCWPWPVSLSL*VWPCLW Trigger: CCAAAGACAAGGCCAGACCCACAGGCTCAAAGAAAC...AGGCCAAGGCCAGCAGGGTGCTGTGTACCCCGACTGTAAGGCGCAGAGTGCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174409.2 |
||
| CDS-3UTR CCA 90 bp | TCTGCGCCTTACAGTCGGGGTACACAGCACCCTGCTGGCCTTGGCCTCATTGGTTGGGTTGCTGCTTACTaGCAAGTCCTCTGCAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SAPYSRGTQHPAGLGLIGWVAAY*QVLCRL Trigger: AAGCCTGCAGAGGACTTGCCAGTAAGCAGCAACCCA...ACCAATGAGGCCAAGGCCAGCAGGGTGCTGTGTACCCCGACTGTAAGGCGCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174409.2 |
||
| CDS-3UTR TCA 90 bp | AGCACTCTGCGCCTTACAGTCGGGGTACACAGCACCCTGCTGGCCTTGGCCTCAAAACCAGTGCTGTTCTaGGAAAGGCACTTTGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: STLRLTVGVHSTLLALASKPVLF*ERHFEG Trigger: TCCTTCAAAGTGCCTTTCTCAGAACAGCACTGGTTT...TGAGGCCAAGGCCAGCAGGGTGCTGTGTACCCCGACTGTAAGGCGCAGAGTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174409.2 |
||
| CDS-3UTR GCA 90 bp | CACTCTGCGCCTTACAGTCGGGGTACACAGCACCCTGCTGGCCTTGGCCTCATTACCACTGTTGTATTCTaGCCTCCCACTAACAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: HSAPYSRGTQHPAGLGLITTVVF*PPTNST Trigger: TGTGCTGTTAGTGGGAGGGCAGAATACAACAGTGGT...AATGAGGCCAAGGCCAGCAGGGTGCTGTGTACCCCGACTGTAAGGCGCAGAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174409.2 |
||
| CDS-3UTR GCA 90 bp | GCACCCTGCTGGCCTTGGCCTCATTGGTCTTCTGGACAATTTGCTGACAGATCGAAGGGCGAGCCCCTCTaGAGAGAAAGGCCTATTGTC | + |
|
Preference number: 4 (lower is better) Translates to: APCWPWPHWSSGQFADRSKGEPL*RERPIV Trigger: GACAATAGGCCTTTCTCTGCAGAGGGGCTCGCCCTT...CGATCTGTCAGCAAATTGTCCAGAAGACCAATGAGGCCAAGGCCAGCAGGGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174409.2 |
||
| 3UTR CAA 72 bp | AGTCGCTGGTGTTTGGAGTTGGCCATGATCTTCATCTaGGCAAGGGCGAGCCCCTCTGCAGAGAAAGGCCTA | + |
|
Preference number: 4 (lower is better) Translates to: SRWCLELAMIFI*ARASPSAEKGL Trigger: TAGGCCTTTCTCTGCAGAGGGGCTCGCCCTTGCCAAGATGAAGATCATGGCCAACTCCAAACACCAGCGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
||
| 3UTR CAA 72 bp | GAGATAGTAGCTGGCTTCAGTCGCTGGTGTTTGGAGTaGGCCATGATCTTCATCTTGGCAAGGGCGAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: EIVAGFSRWCLE*AMIFILARASP Trigger: GGGGCTCGCCCTTGCCAAGATGAAGATCATGGCCAACTCCAAACACCAGCGACTGAAGCCAGCTACTATCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
||
| CDS-3UTR TCA 90 bp | CACCCTGCTGGCCTTGGCCTCATTGGTCTTCTGGACAATTTGCTGACAGATCGAGCAGTTGTGACCAGATaGGAGGCACAGAGTCACCCA | + |
|
Preference number: 4 (lower is better) Translates to: HPAGLGLIGLLDNLLTDRAVVTR*EAQSHP Trigger: TGGGTGACTCTGTGCCTCTCATCTGGTCACAACTGC...TCGATCTGTCAGCAAATTGTCCAGAAGACCAATGAGGCCAAGGCCAGCAGGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174409.2 |
||
| CDS-3UTR CCA 90 bp | CCTTACAGTCGGGGTACACAGCACCCTGCTGGCCTTGGCCTCATTGGTCTTCTGGAGCGAGTGCTTGATTaGCTTGGTCAGCTTCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: PYSRGTQHPAGLGLIGLLERVLD*LGQLHL Trigger: AAGATGAAGCTGACCAAGCCAATCAAGCACTCGCTC...CAGAAGACCAATGAGGCCAAGGCCAGCAGGGTGCTGTGTACCCCGACTGTAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174409.2 |
||
| CDS-3UTR CCA 90 bp | CAGCACTCTGCGCCTTACAGTCGGGGTACACAGCACCCTGCTGGCCTTGGCCTCGGTACCTTGTTAGACTaGTCCAAAATGAATGGCATT | + |
|
Preference number: 4 (lower is better) Translates to: QHSAPYSRGTQHPAGLGLGTLLD*SKMNGI Trigger: AATGCCATTCATTTTGGACCAGTCTAACAAGGTACC...GAGGCCAAGGCCAGCAGGGTGCTGTGTACCCCGACTGTAAGGCGCAGAGTGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174409.2 |
||
| CDS-3UTR CCA 90 bp | CCCCGCCCCATCCTCACCAATAAACTTATATCTAGCTCTGGTCTCTATGGGAGAAGGGCTGCCCAGGGGTaGTTGGGGTCTTCTGGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: PRPILTNKLISSSGLYGRRAAQG*LGSSGK Trigger: TTTCCCAGAAGACCCCAACCACCCCTGGGCAGCCCT...TCTCCCATAGAGACCAGAGCTAGATATAAGTTTATTGGTGAGGATGGGGCGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000174409.2 |
||
| CDS-3UTR CCA 90 bp | CCTTACAGTCGGGGTACACAGCACCCTGCTGGCCTTGGCCTCATTGGTCTTCTGCCTTTTTGGTGTGCATaGCTTTCTGGGAATGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PYSRGTQHPAGLGLIGLLPFWCA*LSGNVQ Trigger: CTGCACATTCCCAGAAAGCCATGCACACCAAAAAGG...CAGAAGACCAATGAGGCCAAGGCCAGCAGGGTGCTGTGTACCCCGACTGTAAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174409.2 |
||
| CDS-3UTR CCA 90 bp | GCACTCTGCGCCTTACAGTCGGGGTACACAGCACCCTGCTGGCCTTGGCCTCATGTCTCCTTCATCTTGTaGGCACAGTCTTCTAACTTT | + |
|
Preference number: 4 (lower is better) Translates to: ALCALQSGYTAPCWPWPHVSFIL*AQSSNF Trigger: AAAGTTAGAAGACTGTGCCCACAAGATGAAGGAGAC...ATGAGGCCAAGGCCAGCAGGGTGCTGTGTACCCCGACTGTAAGGCGCAGAGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174409.2 |
||
| CDS-3UTR GCA 90 bp | GCCCCATCCTCACCAATAAACTTATATCTAGCTCTGGTCTCTATGGGAGAAGGAGTGGCAAAGGGCAGATaGAGGGGCATGGTCTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: APSSPINLYLALVSMGEGVAKGR*RGMVWA Trigger: GGCCCAGACCATGCCCCTGCATCTGCCCTTTGCCAC...TCCTTCTCCCATAGAGACCAGAGCTAGATATAAGTTTATTGGTGAGGATGGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174409.2 |
||
| CDS-3UTR CCA 90 bp | CAGCACTCTGCGCCTTACAGTCGGGGTACACAGCACCCTGCTGGCCTTGGCCTCGGTGTTAAAGTTTTCTaGGTTGGGGTAGTTATAACT | + |
|
Preference number: 4 (lower is better) Translates to: QHSAPYSRGTQHPAGLGLGVKVF*VGVVIT Trigger: AGTTATAACTACCCCAACCCAGAAAACTTTAACACC...GAGGCCAAGGCCAGCAGGGTGCTGTGTACCCCGACTGTAAGGCGCAGAGTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000174409.2 |
||
| CDS-3UTR CCA 90 bp | CTTACAGTCGGGGTACACAGCACCCTGCTGGCCTTGGCCTCATTGGTCTTCTGGGCAAATTGGCCAACATaGAAGACACATTGGAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LTVGVHSTLLALASLVFWANWPT*KTHWKP Trigger: TGGCTTCCAATGTGTCTTCCATGTTGGCCAATTTGC...CCAGAAGACCAATGAGGCCAAGGCCAGCAGGGTGCTGTGTACCCCGACTGTAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174409.2 |
||
| 3UTR CAA 72 bp | CAGCTTTGTGGGAAGACAGTGGGCTCACGTGTTTCTTaGAGCCTGTGGGTCTGGCCTTGTCTTTGGACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QLCGKTVGSRVS*SLWVWPCLWTS Trigger: TGAAGTCCAAAGACAAGGCCAGACCCACAGGCTCAAAGAAACACGTGAGCCCACTGTCTTCCCACAAAGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
||
| 3UTR CAA 72 bp | TGGGTTTCGCTAATCAAGATCTCCTTGGACTGCTTCTaGGTAGTGGCAAAGGGCAGATGCAGGGGCATGGTC | + |
|
Preference number: 4 (lower is better) Translates to: WVSLIKISLDCF*VVAKGRCRGMV Trigger: GACCATGCCCCTGCATCTGCCCTTTGCCACTACCAAGAAGCAGTCCAAGGAGATCTTGATTAGCGAAACCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
||
| CDS-3UTR TCA 90 bp | AGCACTCTGCGCCTTACAGTCGGGGTACACAGCACCCTGCTGGCCTTGGCCTCACATATTCAGGATTCATaGGATCTTCAAGGTTTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: STLRLTVGVHSTLLALASHIQDS*DLQGFV Trigger: CACAAAACCTTGAAGATCTCATGAATCCTGAATATG...TGAGGCCAAGGCCAGCAGGGTGCTGTGTACCCCGACTGTAAGGCGCAGAGTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174409.2 |
||
| CDS-3UTR TCA 90 bp | CCCATCCTCACCAATAAACTTATATCTAGCTCTGGTCTCTATGGGAGAAGGAGGCCTTTGCCCGGGAGTTaGGAGCTTTCTGGTACGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PILTNKLISSSGLYGRRRPLPGS*ELSGTG Trigger: CCCCGTACCAGAAAGCTCTCAACTCCCGGGCAAAGG...CCTCCTTCTCCCATAGAGACCAGAGCTAGATATAAGTTTATTGGTGAGGATGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174409.2 |
||
| CDS-3UTR GCA 90 bp | TTCAGGATTCATGAGATCTTCAAGGTTTTGTGCCCACAGGAGGGTGTCCAGTTGCTAGTGGGATCATCCTaGGGGAGGTGGGAGACAAGG | + |
|
Preference number: 4 (lower is better) Translates to: FRIHEIFKVLCPQEGVQLLVGSS*GRWETR Trigger: CCTTGTCTCCCACCTCCCGCAGGATGATCCCACTAG...CAACTGGACACCCTCCTGTGGGCACAAAACCTTGAAGATCTCATGAATCCTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
||
| CDS-3UTR GCA 90 bp | ACTCTGCGCCTTACAGTCGGGGTACACAGCACCCTGCTGGCCTTGGCCTCATTGGAGAAGAGAATATTTTaGAAGGAAAGGTGGGATCAG | + |
|
Preference number: 4 (lower is better) Translates to: TLRLTVGVHSTLLALASLEKRIF*KERWDQ Trigger: CTGATCCCACCTTTCCTTGCAAAATATTCTCTTCTC...CAATGAGGCCAAGGCCAGCAGGGTGCTGTGTACCCCGACTGTAAGGCGCAGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174409.2 |
||
| CDS-3UTR GCA 90 bp | TACACAGCACCCTGCTGGCCTTGGCCTCATTGGTCTTCTGGACAATTTGCTGACATCTTCAAGGTTTTGTaGCCACAGGAGGGTGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: YTAPCWPWPHWSSGQFADIFKVL*PQEGVQ Trigger: CTGGACACCCTCCTGTGGGCACAAAACCTTGAAGAT...GTCAGCAAATTGTCCAGAAGACCAATGAGGCCAAGGCCAGCAGGGTGCTGTGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174409.2 |
||
| CDS-3UTR TCA 90 bp | GCACCCTGCTGGCCTTGGCCTCATTGGTCTTCTGGACAATTTGCTGACAGATCGTGGGAAACAGAAGGCTaGGACTTAAAGAAATGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: APCWPWPHWSSGQFADRSWETEG*DLKKWP Trigger: TGGCCATTTCTTTAAGTCTCAGCCTTCTGTTTCCCA...CGATCTGTCAGCAAATTGTCCAGAAGACCAATGAGGCCAAGGCCAGCAGGGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174409.2 |
||
| CDS-3UTR GCA 90 bp | AAGGGCAAATTGGCCAACATGGAAGACACATTGGAAGCCACAGAGAATGAGGAGGCCAGGCAAGGATGCTaGGACACCCATAGTCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: KGKLANMEDTLEATENEEARQGC*DTHSQL Trigger: AAGCTGACTATGGGTGTCGCAGCATCCTTGCCTGGC...CTCCTCATTCTCTGTGGCTTCCAATGTGTCTTCCATGTTGGCCAATTTGCCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
||
| CDS-3UTR GCA 90 bp | CCCCGCCCCATCCTCACCAATAAACTTATATCTAGCTCTGGTCTCTATGGGAGATTCAGGGGCATCCAGTaGCAGGAAATAATGACGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PRPILTNKLISSSGLYGRFRGIQ*QEIMTA Trigger: GGCCGTCATTATTTCCTGGCACTGGATGCCCCTGAA...TCTCCCATAGAGACCAGAGCTAGATATAAGTTTATTGGTGAGGATGGGGCGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000174409.2 |
||
| CDS-3UTR GCA 90 bp | CTCTGCCCCGCCCCATCCTCACCAATAAACTTATATCTAGCTCTGGTCTCTATGTACTGGCAAGTCCTCTaGAGGCTTCCTCTCCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: LCPAPSSPINLYLALVSMYWQVL*RLPLHL Trigger: CAGATGGAGAGGAAGCCTGCAGAGGACTTGCCAGTA...CATAGAGACCAGAGCTAGATATAAGTTTATTGGTGAGGATGGGGCGGGGCAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174409.2 |
||
| CDS-3UTR CCA 90 bp | TACACAGCACCCTGCTGGCCTTGGCCTCATTGGTCTTCTGGACAATTTGCTGACGTCTGGCCTTGTCTTTaGACTTCAGAAAGGAGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: YTAPCWPWPHWSSGQFADVWPCL*TSERRD Trigger: ATCCCTCCTTTCTGAAGTCCAAAGACAAGGCCAGAC...GTCAGCAAATTGTCCAGAAGACCAATGAGGCCAAGGCCAGCAGGGTGCTGTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174409.2 |
||
| CDS-3UTR TCA 90 bp | CCCCGCCCCATCCTCACCAATAAACTTATATCTAGCTCTGGTCTCTATGGGAGAAGGTATTCGGCCATCTaGAGGGTCTTCTGCATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PRPILTNKLISSSGLYGRRYSAI*RVFCIS Trigger: AGAGATGCAGAAGACCCTTCAGATGGCCGAATACCT...TCTCCCATAGAGACCAGAGCTAGATATAAGTTTATTGGTGAGGATGGGGCGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163574.8 ENSMUST00000174409.2 |
||
| CDS-3UTR TCA 90 bp | CTCTGCCCCGCCCCATCCTCACCAATAAACTTATATCTAGCTCTGGTCTCTATGAGGTATTCGGCCATCTaGAGGGTCTTCTGCATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LCPAPSSPINLYLALVSMRYSAI*RVFCIS Trigger: AGAGATGCAGAAGACCCTTCAGATGGCCGAATACCT...CATAGAGACCAGAGCTAGATATAAGTTTATTGGTGAGGATGGGGCGGGGCAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163574.8 ENSMUST00000174409.2 |
||
| CDS-3UTR CCA 90 bp | CTCTGCCCCGCCCCATCCTCACCAATAAACTTATATCTAGCTCTGGTCTCTATGTTGAGCCTGTGGGTCTaGCCTTGTCTTTGGACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LCPAPSSPINLYLALVSMLSLWV*PCLWTS Trigger: TGAAGTCCAAAGACAAGGCCAGACCCACAGGCTCAA...CATAGAGACCAGAGCTAGATATAAGTTTATTGGTGAGGATGGGGCGGGGCAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174409.2 |
||
| CDS-3UTR CCA 90 bp | CTCTGCCCCGCCCCATCCTCACCAATAAACTTATATCTAGCTCTGGTCTCTATGGTGTGCATGGCTTTCTaGGAATGTGCAGGTGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LCPAPSSPINLYLALVSMVCMAF*ECAGAC Trigger: ACAAGCACCTGCACATTCCCAGAAAGCCATGCACAC...CATAGAGACCAGAGCTAGATATAAGTTTATTGGTGAGGATGGGGCGGGGCAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174409.2 |
||
| 3UTR CAA 72 bp | GGCACTTTGAAGGAGTTTCCATTAGACGACCCTGGCTaGTGTCTTCCTCAGAATCAGATTTGTGGGCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GTLKEFPLDDPG*CLPQNQICGPG Trigger: ACCAGGCCCACAAATCTGATTCTGAGGAAGACACAAGCCAGGGTCGTCTAATGGAAACTCCTTCAAAGTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
||
| 3UTR CAA 72 bp | TCCTCGGTCAAGACCCTCTTCTGCATCTCTGTCTCCTaGGACTTTAGATTGGGCAAGTTCACAGTTGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SSVKTLFCISVS*DFRLGKFTVVS Trigger: GGAGACAACTGTGAACTTGCCCAATCTAAAGTCCAAGGAGACAGAGATGCAGAAGAGGGTCTTGACCGAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
||
| CDS-3UTR TCA 90 bp | GCCCCATCCTCACCAATAAACTTATATCTAGCTCTGGTCTCTATGGGAGAAGGAGGAAGCCACAGAGAATaGGGAGGGCAGAGAGATAGT | + |
|
Preference number: 4 (lower is better) Translates to: APSSPINLYLALVSMGEGGSHRE*GGQRDS Trigger: ACTATCTCTCTGCCCTCCTCATTCTCTGTGGCTTCC...TCCTTCTCCCATAGAGACCAGAGCTAGATATAAGTTTATTGGTGAGGATGGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174409.2 |
||
| CDS-3UTR CCA 90 bp | CCCATCCTCACCAATAAACTTATATCTAGCTCTGGTCTCTATGGGAGAAGGAGGACACATGCAGCTTTGTaGGAAGACAGTGGGCTCACG | + |
|
Preference number: 4 (lower is better) Translates to: PILTNKLISSSGLYGRRRTHAAL*EDSGLT Trigger: CGTGAGCCCACTGTCTTCCCACAAAGCTGCATGTGT...CCTCCTTCTCCCATAGAGACCAGAGCTAGATATAAGTTTATTGGTGAGGATGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174409.2 |
||
| CDS-3UTR CCA 90 bp | TACACAGCACCCTGCTGGCCTTGGCCTCATTGGTCTTCTGGACAATTTGCTGACTGTCAAAGGGCAAATTaGCCAACATGGAAGACACAT | + |
|
Preference number: 4 (lower is better) Translates to: YTAPCWPWPHWSSGQFADCQRAN*PTWKTH Trigger: ATGTGTCTTCCATGTTGGCCAATTTGCCCTTTGACA...GTCAGCAAATTGTCCAGAAGACCAATGAGGCCAAGGCCAGCAGGGTGCTGTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174409.2 |
||
| 3UTR CAA 72 bp | AAAGGTGGGATCAGCAACTTCAACTGTAAGTTTGCCTaGAGACTGGACCTGAAAGTGCCAAGTGGAGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: KGGISNFNCKFA*RLDLKVPSGGK Trigger: CTTGCCTCCACTTGGCACTTTCAGGTCCAGTCTCAAGGCAAACTTACAGTTGAAGTTGCTGATCCCACCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
||
| 3UTR CAA 72 bp | AGACGACCCTGGCTTGTGTCTTCCTCAGAATCAGATTaGTGGGCCTGGTTTATCGTGTTAGAGATGATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RRPWLVSSSESD*WAWFIVLEMML Trigger: CAGCATCATCTCTAACACGATAAACCAGGCCCACAAATCTGATTCTGAGGAAGACACAAGCCAGGGTCGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
||
| 3UTR CAA 72 bp | ATCTTCAAGGTTTTGTGCCCACAGGAGGGTGTCCAGTaGATTAGAGGAAACCGTGACAGGAAAACCAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: IFKVLCPQEGVQ*IRGNRDRKTSA Trigger: AGCACTGGTTTTCCTGTCACGGTTTCCTCTAATCAACTGGACACCCTCCTGTGGGCACAAAACCTTGAAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
||
| 3UTR CAA 72 bp | GTGTCAAAGGGCAAATTGGCCAACATGGAAGACACATaGGAAGCCACAGAGAATGAGGAGGGCAGAGAGATA | + |
|
Preference number: 4 (lower is better) Translates to: VSKGKLANMEDT*EATENEEGREI Trigger: TATCTCTCTGCCCTCCTCATTCTCTGTGGCTTCCAATGTGTCTTCCATGTTGGCCAATTTGCCCTTTGACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
||
| 3UTR CAA 72 bp | TCTGAAAAGGTTGTCTGGCTGGTGTCAAAGGGCAAATaGGCCAACATGGAAGACACATTGGAAGCCACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SEKVVWLVSKGK*ANMEDTLEATE Trigger: CTCTGTGGCTTCCAATGTGTCTTCCATGTTGGCCAATTTGCCCTTTGACACCAGCCAGACAACCTTTTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
||
| 3UTR CAA 72 bp | CCTGCTGGCCTTGGCCTCATTGGTCTTCTGGACAATTaGCTGACAGATCGAGTCTCCTGCATTATGTTATCT | + |
|
Preference number: 4 (lower is better) Translates to: PAGLGLIGLLDN*LTDRVSCIMLS Trigger: AGATAACATAATGCAGGAGACTCGATCTGTCAGCAAATTGTCCAGAAGACCAATGAGGCCAAGGCCAGCAGG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
||
| CDS-3UTR CCA 90 bp | TACACAGCACCCTGCTGGCCTTGGCCTCATTGGTCTTCTGGACAATTTGCTGACCTGGTCCAAAATGAATaGCATTTTCCTCGATTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: YTAPCWPWPHWSSGQFADLVQNE*HFPRFD Trigger: ATCGAATCGAGGAAAATGCCATTCATTTTGGACCAG...GTCAGCAAATTGTCCAGAAGACCAATGAGGCCAAGGCCAGCAGGGTGCTGTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174409.2 |
||
| CDS-3UTR CCA 90 bp | CCTCTGCCCCGCCCCATCCTCACCAATAAACTTATATCTAGCTCTGGTCTCTATAAAAGGTTGTCTGGCTaGTGTCAAAGGGCAAATTGG | + |
|
Preference number: 4 (lower is better) Translates to: PLPRPILTNKLISSSGLYKRLSG*CQRANW Trigger: CCAATTTGCCCTTTGACACCAGCCAGACAACCTTTT...ATAGAGACCAGAGCTAGATATAAGTTTATTGGTGAGGATGGGGCGGGGCAGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000174409.2 |
||
| CDS-3UTR CCA 90 bp | CCCCGCCCCATCCTCACCAATAAACTTATATCTAGCTCTGGTCTCTATGGGAGATCTGAAAAGGTTGTCTaGCTGGTGTCAAAGGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: PRPILTNKLISSSGLYGRSEKVV*LVSKGK Trigger: TTTGCCCTTTGACACCAGCCAGACAACCTTTTCAGA...TCTCCCATAGAGACCAGAGCTAGATATAAGTTTATTGGTGAGGATGGGGCGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000174409.2 |
||
| CDS-3UTR TCA 90 bp | CCCATCCTCACCAATAAACTTATATCTAGCTCTGGTCTCTATGGGAGAAGGAGGAGAAGATTGCAGTTGTaGCCAGATGAGAGGCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: PILTNKLISSSGLYGRRRRRLQL*PDERHR Trigger: TCTGTGCCTCTCATCTGGTCACAACTGCAATCTTCT...CCTCCTTCTCCCATAGAGACCAGAGCTAGATATAAGTTTATTGGTGAGGATGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174409.2 |
||
| CDS-3UTR CCA 90 bp | CCTCTGCCCCGCCCCATCCTCACCAATAAACTTATATCTAGCTCTGGTCTCTATTTTTGCAAGGAAAGGTaGGATCAGCAACTTCAACTG | + |
|
Preference number: 4 (lower is better) Translates to: PLPRPILTNKLISSSGLYFCKER*DQQLQL Trigger: CAGTTGAAGTTGCTGATCCCACCTTTCCTTGCAAAA...ATAGAGACCAGAGCTAGATATAAGTTTATTGGTGAGGATGGGGCGGGGCAGAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000174409.2 |
||
| CDS-3UTR CCA 90 bp | CCTCTGCCCCGCCCCATCCTCACCAATAAACTTATATCTAGCTCTGGTCTCTATATCAGAGCAGGCATGTaGATAGGACTTGGTTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PLPRPILTNKLISSSGLYIRAGM*IGLGFC Trigger: ACAAAAACCAAGTCCTATCCACATGCCTGCTCTGAT...ATAGAGACCAGAGCTAGATATAAGTTTATTGGTGAGGATGGGGCGGGGCAGAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000174409.2 |
||
| 3UTR CAA 72 bp | GGTATTTCCAGCACGGAGGGTTCTGTTTTTGGTGTCTaGGATAATTTAGGCCCTCGAAGCATGTTGATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GISSTEGSVFGV*DNLGPRSMLMR Trigger: CCTCATCAACATGCTTCGAGGGCCTAAATTATCCAAGACACCAAAAACAGAACCCTCCGTGCTGGAAATACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
||
| 3UTR CAA 72 bp | ACCCTCTTCTGCATCTCTGTCTCCTTGGACTTTAGATaGGGCAAGTTCACAGTTGTCTCCTTCATCTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TLFCISVSLDFR*GKFTVVSFILW Trigger: CCACAAGATGAAGGAGACAACTGTGAACTTGCCCAATCTAAAGTCCAAGGAGACAGAGATGCAGAAGAGGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
||
| 3UTR CAA 72 bp | CAGATCGAGTCTCCTGCATTATGTTATCTTAAATCCTaGGGTTGCTGCTTACTGGCAAGTCCTCTGCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QIESPALCYLKS*GCCLLASPLQA Trigger: AGCCTGCAGAGGACTTGCCAGTAAGCAGCAACCCAAGGATTTAAGATAACATAATGCAGGAGACTCGATCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
||
| CDS-3UTR CCA 90 bp | CTCTGCCCCGCCCCATCCTCACCAATAAACTTATATCTAGCTCTGGTCTCTATGTGGTCAGCTTCATCTTaGTCTTTGGTTTATGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LCPAPSSPINLYLALVSMWSASS*SLVYEK Trigger: CTTCTCATAAACCAAAGACCAAGATGAAGCTGACCA...CATAGAGACCAGAGCTAGATATAAGTTTATTGGTGAGGATGGGGCGGGGCAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174409.2 |
||
| CDS-3UTR CCA 90 bp | GCCCCATCCTCACCAATAAACTTATATCTAGCTCTGGTCTCTATGGGAGAAGGAGCATCTCTGTCTCCTTaGACTTTAGATTGGGCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: APSSPINLYLALVSMGEGASLSP*TLDWAS Trigger: ACTTGCCCAATCTAAAGTCCAAGGAGACAGAGATGC...TCCTTCTCCCATAGAGACCAGAGCTAGATATAAGTTTATTGGTGAGGATGGGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174409.2 |
||
| 3UTR CAA 72 bp | TGTGGCATATTCAGGATTCATGAGATCTTCAAGGTTTaGTGCCCACAGGAGGGTGTCCAGTTGATTAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: CGIFRIHEIFKV*CPQEGVQLIRG Trigger: TCCTCTAATCAACTGGACACCCTCCTGTGGGCACAAAACCTTGAAGATCTCATGAATCCTGAATATGCCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163574.8 |
||
| CDS-3UTR CAA 90 bp | AGCACTCTGCGCCTTACAGTCGGGGTACACAGCACCCTGCTGGCCTTGGCCTCATCTGGTACGGGGCAGTaGGATCCTTCTGAGACCGGA | + |
|
Preference number: 5 (lower is better) Translates to: STLRLTVGVHSTLLALASSGTGQ*DPSETG Trigger: TCCGGTCTCAGAAGGATCCAACTGCCCCGTACCAGA...TGAGGCCAAGGCCAGCAGGGTGCTGTGTACCCCGACTGTAAGGCGCAGAGTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174409.2 |
||
| CDS-3UTR CAA 90 bp | CCTTACAGTCGGGGTACACAGCACCCTGCTGGCCTTGGCCTCATTGGTCTTCTGGGCTCACGTGTTTCTTaGAGCCTGTGGGTCTGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: PYSRGTQHPAGLGLIGLLGSRVS*SLWVWP Trigger: AGGCCAGACCCACAGGCTCAAAGAAACACGTGAGCC...CAGAAGACCAATGAGGCCAAGGCCAGCAGGGTGCTGTGTACCCCGACTGTAAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174409.2 |
||
| CDS-3UTR CAA 90 bp | CAGCACTCTGCGCCTTACAGTCGGGGTACACAGCACCCTGCTGGCCTTGGCCTCTCCTCAGAATCAGATTaGTGGGCCTGGTTTATCGTG | + |
|
Preference number: 5 (lower is better) Translates to: QHSAPYSRGTQHPAGLGLSSESD*WAWFIV Trigger: CACGATAAACCAGGCCCACAAATCTGATTCTGAGGA...GAGGCCAAGGCCAGCAGGGTGCTGTGTACCCCGACTGTAAGGCGCAGAGTGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174409.2 |
||
| CDS-3UTR CAA 90 bp | ACTCTGCGCCTTACAGTCGGGGTACACAGCACCCTGCTGGCCTTGGCCTCATTGCAGGAGGGTGTCCAGTaGATTAGAGGAAACCGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: TLRLTVGVHSTLLALASLQEGVQ*IRGNRD Trigger: GTCACGGTTTCCTCTAATCAACTGGACACCCTCCTG...CAATGAGGCCAAGGCCAGCAGGGTGCTGTGTACCCCGACTGTAAGGCGCAGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174409.2 |
||
| CDS-3UTR CAA 90 bp | CTTACAGTCGGGGTACACAGCACCCTGCTGGCCTTGGCCTCATTGGTCTTCTGGTGGGGTAGTTATAACTaGGGGCTTCAAGGGCTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LTVGVHSTLLALASLVFWWGSYN*GLQGLP Trigger: GGGCAGCCCTTGAAGCCCCAAGTTATAACTACCCCA...CCAGAAGACCAATGAGGCCAAGGCCAGCAGGGTGCTGTGTACCCCGACTGTAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000174409.2 |
||
| CDS-3UTR CAA 90 bp | CTTACAGTCGGGGTACACAGCACCCTGCTGGCCTTGGCCTCATTGGTCTTCTGGCCTGTGGGTCTGGCCTaGTCTTTGGACTTCAGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LTVGVHSTLLALASLVFWPVGLA*SLDFRK Trigger: CTTTCTGAAGTCCAAAGACAAGGCCAGACCCACAGG...CCAGAAGACCAATGAGGCCAAGGCCAGCAGGGTGCTGTGTACCCCGACTGTAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174409.2 |
||
| CDS-3UTR CAA 90 bp | CGCCTTACAGTCGGGGTACACAGCACCCTGCTGGCCTTGGCCTCATTGGTCTTCTGGGCAAGTTCACAGTaGTCTCCTTCATCTTGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: RLTVGVHSTLLALASLVFWASSQ*SPSSCG Trigger: CCCACAAGATGAAGGAGACAACTGTGAACTTGCCCA...GAAGACCAATGAGGCCAAGGCCAGCAGGGTGCTGTGTACCCCGACTGTAAGGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174409.2 |
||
| CDS-3UTR CAA 90 bp | CTTACAGTCGGGGTACACAGCACCCTGCTGGCCTTGGCCTCATTGGTCTTCTGGAACGCAGGAGTCCCATaGTTGGTTACCTGGGTAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LTVGVHSTLLALASLVFWNAGVP*LVTWVK Trigger: CTTTACCCAGGTAACCAACAATGGGACTCCTGCGTT...CCAGAAGACCAATGAGGCCAAGGCCAGCAGGGTGCTGTGTACCCCGACTGTAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163574.8 ENSMUST00000174409.2 |
||
| CDS-3UTR CAA 90 bp | CAGCACTCTGCGCCTTACAGTCGGGGTACACAGCACCCTGCTGGCCTTGGCCTCTCTGTTTTTGGTGTCTaGGATAATTTAGGCCCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: QHSAPYSRGTQHPAGLGLSVFGV*DNLGPR Trigger: TCGAGGGCCTAAATTATCCAAGACACCAAAAACAGA...GAGGCCAAGGCCAGCAGGGTGCTGTGTACCCCGACTGTAAGGCGCAGAGTGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174409.2 |
||
| CDS-3UTR CAA 90 bp | CCTTACAGTCGGGGTACACAGCACCCTGCTGGCCTTGGCCTCATTGGTCTTCTGTTAGACGACCCTGGCTaGTGTCTTCCTCAGAATCAG | + |
|
Preference number: 5 (lower is better) Translates to: PYSRGTQHPAGLGLIGLLLDDPG*CLPQNQ Trigger: CTGATTCTGAGGAAGACACAAGCCAGGGTCGTCTAA...CAGAAGACCAATGAGGCCAAGGCCAGCAGGGTGCTGTGTACCCCGACTGTAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174409.2 |
||
| CDS-3UTR CAA 90 bp | CCCCGCCCCATCCTCACCAATAAACTTATATCTAGCTCTGGTCTCTATGGGAGAGCTGCCCAGGGGTGGTaGGGGTCTTCTGGGAAACAG | + |
|
Preference number: 5 (lower is better) Translates to: PRPILTNKLISSSGLYGRAAQGW*GSSGKQ Trigger: CTGTTTCCCAGAAGACCCCAACCACCCCTGGGCAGC...TCTCCCATAGAGACCAGAGCTAGATATAAGTTTATTGGTGAGGATGGGGCGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000174409.2 |
||
| CDS-3UTR CAA 90 bp | CTCTGCGCCTTACAGTCGGGGTACACAGCACCCTGCTGGCCTTGGCCTCATTGGAACATGGAAGACACATaGGAAGCCACAGAGAATGAG | + |
|
Preference number: 5 (lower is better) Translates to: LCALQSGYTAPCWPWPHWNMEDT*EATENE Trigger: CTCATTCTCTGTGGCTTCCAATGTGTCTTCCATGTT...CCAATGAGGCCAAGGCCAGCAGGGTGCTGTGTACCCCGACTGTAAGGCGCAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174409.2 |
||
| CDS-3UTR CAA 90 bp | CCTTACAGTCGGGGTACACAGCACCCTGCTGGCCTTGGCCTCATTGGTCTTCTGGTGTCAAAGGGCAAATaGGCCAACATGGAAGACACA | + |
|
Preference number: 5 (lower is better) Translates to: PYSRGTQHPAGLGLIGLLVSKGK*ANMEDT Trigger: TGTGTCTTCCATGTTGGCCAATTTGCCCTTTGACAC...CAGAAGACCAATGAGGCCAAGGCCAGCAGGGTGCTGTGTACCCCGACTGTAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174409.2 |
||
| CDS-3UTR CAA 90 bp | GCACTCTGCGCCTTACAGTCGGGGTACACAGCACCCTGCTGGCCTTGGCCTCATCCCATAGTCAGCTTGTaGGATTTGTTGTGTAATAAC | + |
|
Preference number: 5 (lower is better) Translates to: ALCALQSGYTAPCWPWPHPIVSL*DLLCNN Trigger: GTTATTACACAACAAATCCAACAAGCTGACTATGGG...ATGAGGCCAAGGCCAGCAGGGTGCTGTGTACCCCGACTGTAAGGCGCAGAGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163574.8 ENSMUST00000174409.2 |
||
| CDS-3UTR CAA 90 bp | CTTACAGTCGGGGTACACAGCACCCTGCTGGCCTTGGCCTCATTGGTCTTCTGGAACTGTAAGTTTGCCTaGAGACTGGACCTGAAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: LTVGVHSTLLALASLVFWNCKFA*RLDLKV Trigger: CACTTTCAGGTCCAGTCTCAAGGCAAACTTACAGTT...CCAGAAGACCAATGAGGCCAAGGCCAGCAGGGTGCTGTGTACCCCGACTGTAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174409.2 |
||
| CDS-3UTR CAA 90 bp | TCTGCGCCTTACAGTCGGGGTACACAGCACCCTGCTGGCCTTGGCCTCATTGGTCTTGGTTTTTGTGACTaGCATCTGATCCTCAGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: SAPYSRGTQHPAGLGLIGLGFCD*HLILRR Trigger: TCTTCTGAGGATCAGATGCAAGTCACAAAAACCAAG...ACCAATGAGGCCAAGGCCAGCAGGGTGCTGTGTACCCCGACTGTAAGGCGCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174409.2 |
||
| CDS-3UTR CAA 90 bp | CACCCTGCTGGCCTTGGCCTCATTGGTCTTCTGGACAATTTGCTGACAGATCGAGAGATCTTCAAGGTTTaGTGCCCACAGGAGGGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: HPAGLGLIGLLDNLLTDREIFKV*CPQEGV Trigger: GACACCCTCCTGTGGGCACAAAACCTTGAAGATCTC...TCGATCTGTCAGCAAATTGTCCAGAAGACCAATGAGGCCAAGGCCAGCAGGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174409.2 |
||
| CDS CCA 90 bp | TTGGATTTGTTGTGTAATAACGCAGGAGTCCCATTGTTGGTTACCTaGGTAAAGTTACTCTCGAACATGGGCAGCGGGCGGAGGGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LDLLCNNAGVPLLVT*VKLLSNMGSGRRGR Trigger: CCTGCCCCTCCGCCCGCTGCCCATGTTCGAGAGTAACTTTACCCAGGTAACCAACAATGGGACTCCTGCGTTATTACACAACAAATCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163574.8 ENSMUST00000174409.2 |
||
| CDS-3UTR CAA 90 bp | ACTCTGCGCCTTACAGTCGGGGTACACAGCACCCTGCTGGCCTTGGCCTCATTGCCCATAGTCAGCTTGTaGGATTTGTTGTGTAATAAC | + |
|
Preference number: 5 (lower is better) Translates to: TLRLTVGVHSTLLALASLPIVSL*DLLCNN Trigger: GTTATTACACAACAAATCCAACAAGCTGACTATGGG...CAATGAGGCCAAGGCCAGCAGGGTGCTGTGTACCCCGACTGTAAGGCGCAGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163574.8 ENSMUST00000174409.2 |
||
| CDS-3UTR CAA 90 bp | TCTGCGCCTTACAGTCGGGGTACACAGCACCCTGCTGGCCTTGGCCTCATTGGTACACCCATAGTCAGCTaGTTGGATTTGTTGTGTAAT | + |
|
Preference number: 5 (lower is better) Translates to: SAPYSRGTQHPAGLGLIGTPIVS*LDLLCN Trigger: ATTACACAACAAATCCAACAAGCTGACTATGGGTGT...ACCAATGAGGCCAAGGCCAGCAGGGTGCTGTGTACCCCGACTGTAAGGCGCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163574.8 ENSMUST00000174409.2 |
||
| CDS-3UTR CAA 90 bp | CCTCTGCCCCGCCCCATCCTCACCAATAAACTTATATCTAGCTCTGGTCTCTATGGTCTGGCCTTGTCTTaGGACTTCAGAAAGGAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: PLPRPILTNKLISSSGLYGLALS*DFRKEG Trigger: TCCCTCCTTTCTGAAGTCCAAAGACAAGGCCAGACC...ATAGAGACCAGAGCTAGATATAAGTTTATTGGTGAGGATGGGGCGGGGCAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174409.2 |
||
| CDS-3UTR CAA 90 bp | GCACCCTGCTGGCCTTGGCCTCATTGGTCTTCTGGACAATTTGCTGACAGATCGATTAGATGGTCCTTTTaGGTGTGCATGGCTTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: APCWPWPHWSSGQFADRSIRWSF*VCMAFW Trigger: CCAGAAAGCCATGCACACCAAAAAGGACCATCTAAT...CGATCTGTCAGCAAATTGTCCAGAAGACCAATGAGGCCAAGGCCAGCAGGGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174409.2 |
||
| CDS-3UTR CAA 90 bp | GCCCCATCCTCACCAATAAACTTATATCTAGCTCTGGTCTCTATGGGAGAAGGAAACGCAGGAGTCCCATaGTTGGTTACCTGGGTAAAG | + |
|
Preference number: 5 (lower is better) Translates to: APSSPINLYLALVSMGEGNAGVP*LVTWVK Trigger: CTTTACCCAGGTAACCAACAATGGGACTCCTGCGTT...TCCTTCTCCCATAGAGACCAGAGCTAGATATAAGTTTATTGGTGAGGATGGGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163574.8 ENSMUST00000174409.2 |
||
| CDS-3UTR CAA 90 bp | CCCCGCCCCATCCTCACCAATAAACTTATATCTAGCTCTGGTCTCTATGGGAGATCTGAGAAAGGCACTTaGAAGGAGTTTCCATTAGAC | + |
|
Preference number: 5 (lower is better) Translates to: PRPILTNKLISSSGLYGRSEKGT*KEFPLD Trigger: GTCTAATGGAAACTCCTTCAAAGTGCCTTTCTCAGA...TCTCCCATAGAGACCAGAGCTAGATATAAGTTTATTGGTGAGGATGGGGCGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174409.2 |
||
| CDS-3UTR CAA 90 bp | CCCATCCTCACCAATAAACTTATATCTAGCTCTGGTCTCTATGGGAGAAGGAGGTGCATCTCTGTCTCCTaGGACTTTAGATTGGGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: PILTNKLISSSGLYGRRRCISVS*DFRLGK Trigger: CTTGCCCAATCTAAAGTCCAAGGAGACAGAGATGCA...CCTCCTTCTCCCATAGAGACCAGAGCTAGATATAAGTTTATTGGTGAGGATGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174409.2 |
||
| CDS CCA 72 bp | CGGCCATCTGAAGGGTCTTCTGCATCTCTCCAAGGATaGGAACCCACTTCGGAGGCTCCGGGGGAGGCGGAG | + |
|
Preference number: 6 (lower is better) Translates to: RPSEGSSASLQG*EPTSEAPGEAE Trigger: CTCCGCCTCCCCCGGAGCCTCCGAAGTGGGTTCCCATCCTTGGAGAGATGCAGAAGACCCTTCAGATGGCCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000163574.8 ENSMUST00000174409.2 |
||
| CDS CCA 72 bp | TTGTGTAATAACGCAGGAGTCCCATTGTTGGTTACCTaGGTAAAGTTACTCTCGAACATGGGCAGCGGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: LCNNAGVPLLVT*VKLLSNMGSGR Trigger: CCGCCCGCTGCCCATGTTCGAGAGTAACTTTACCCAGGTAACCAACAATGGGACTCCTGCGTTATTACACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163574.8 ENSMUST00000174409.2 |
||
| CDS CAA 72 bp | AGGCCAGGCAAGGATGCTGCGACACCCATAGTCAGCTaGTTGGATTTGTTGTGTAATAACGCAGGAGTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: RPGKDAATPIVS*LDLLCNNAGVP Trigger: TGGGACTCCTGCGTTATTACACAACAAATCCAACAAGCTGACTATGGGTGTCGCAGCATCCTTGCCTGGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163574.8 ENSMUST00000174409.2 |
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| CDS CAA 90 bp | GTCAGCTTGTTGGATTTGTTGTGTAATAACGCAGGAGTCCCATTGTaGGTTACCTGGGTAAAGTTACTCTCGAACATGGGCAGCGGGCGG | + |
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Preference number: 6 (lower is better) Translates to: VSLLDLLCNNAGVPL*VTWVKLLSNMGSGR Trigger: CCGCCCGCTGCCCATGTTCGAGAGTAACTTTACCCAGGTAACCAACAATGGGACTCCTGCGTTATTACACAACAAATCCAACAAGCTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163574.8 ENSMUST00000174409.2 |
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| CDS CAA 72 bp | CCAGGCAAGGATGCTGCGACACCCATAGTCAGCTTGTaGGATTTGTTGTGTAATAACGCAGGAGTCCCATTG | + |
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Preference number: 6 (lower is better) Translates to: PGKDAATPIVSL*DLLCNNAGVPL Trigger: CAATGGGACTCCTGCGTTATTACACAACAAATCCAACAAGCTGACTATGGGTGTCGCAGCATCCTTGCCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163574.8 ENSMUST00000174409.2 |
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| CDS CAA 90 bp | ATAGTCAGCTTGTTGGATTTGTTGTGTAATAACGCAGGAGTCCCATaGTTGGTTACCTGGGTAAAGTTACTCTCGAACATGGGCAGCGGG | + |
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Preference number: 6 (lower is better) Translates to: IVSLLDLLCNNAGVP*LVTWVKLLSNMGSG Trigger: CCCGCTGCCCATGTTCGAGAGTAACTTTACCCAGGTAACCAACAATGGGACTCCTGCGTTATTACACAACAAATCCAACAAGCTGACTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163574.8 ENSMUST00000174409.2 |
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| CDS CAA 72 bp | TTGGATTTGTTGTGTAATAACGCAGGAGTCCCATTGTaGGTTACCTGGGTAAAGTTACTCTCGAACATGGGC | + |
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Preference number: 6 (lower is better) Translates to: LDLLCNNAGVPL*VTWVKLLSNMG Trigger: GCCCATGTTCGAGAGTAACTTTACCCAGGTAACCAACAATGGGACTCCTGCGTTATTACACAACAAATCCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163574.8 ENSMUST00000174409.2 |
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| CDS CAA 72 bp | TTGTTGGATTTGTTGTGTAATAACGCAGGAGTCCCATaGTTGGTTACCTGGGTAAAGTTACTCTCGAACATG | + |
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Preference number: 6 (lower is better) Translates to: LLDLLCNNAGVP*LVTWVKLLSNM Trigger: CATGTTCGAGAGTAACTTTACCCAGGTAACCAACAATGGGACTCCTGCGTTATTACACAACAAATCCAACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163574.8 ENSMUST00000174409.2 |
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