Pregenerated sensors for FAM71E1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051113Ensembl transcript IDs: ENSMUST00000107927.5, ENSMUST00000205359.2, ENSMUST00000205422.2, ENSMUST00000206398.2
Found 111 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTAGAGCAGCCGCACCCAGCGGCCAAACTCGCAGTCGCGGGTCTCTaGAGGAGAGCGCAGTTGCAAGTAGAAGGCGCGGCCAGTTCGGAA | + |
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Preference number: 1 (lower is better) Translates to: VEQPHPAAKLAVAGL*RRAQLQVEGAASSE Trigger: TTCCGAACTGGCCGCGCCTTCTACTTGCAACTGCGCTCTCCTCCAGAGACCCGCGACTGCGAGTTTGGCCGCTGGGTGCGGCTGCTCTAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206398.2 |
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| 3UTR CCA 90 bp | GAGCCTGACCAGCATGAGGGTCTGGGTTTGAGAGAGGTGGGCCTGTaGGCGTCTTGGGAAGAGGCCTCACCTTCCACAACTGTCATCCTC | + |
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Preference number: 1 (lower is better) Translates to: EPDQHEGLGLREVGL*ASWEEASPSTTVIL Trigger: GAGGATGACAGTTGTGGAAGGTGAGGCCTCTTCCCAAGACGCCCACAGGCCCACCTCTCTCAAACCCAGACCCTCATGCTGGTCAGGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205359.2 |
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| 3UTR GCA 90 bp | CCCACCCCTTCAGTGAGACGGTTTCTCTCCCTAGAACCCACTTGGTaGCAAGAACCCACTTGGTGCCAGGCAAAGGCTGGGAGATGGCTG | + |
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Preference number: 1 (lower is better) Translates to: PTPSVRRFLSLEPTW*QEPTWCQAKAGRWL Trigger: CAGCCATCTCCCAGCCTTTGCCTGGCACCAAGTGGGTTCTTGGCACCAAGTGGGTTCTAGGGAGAGAAACCGTCTCACTGAAGGGGTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205359.2 |
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| 3UTR CCA 90 bp | CAGCATGAGGGTCTGGGTTTGAGAGAGGTGGGCCTGTGGGCGTCTTaGGAAGAGGCCTCACCTTCCACAACTGTCATCCTCAGTTCCCCT | + |
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Preference number: 1 (lower is better) Translates to: QHEGLGLREVGLWAS*EEASPSTTVILSSP Trigger: AGGGGAACTGAGGATGACAGTTGTGGAAGGTGAGGCCTCTTCCCAAGACGCCCACAGGCCCACCTCTCTCAAACCCAGACCCTCATGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205359.2 |
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| 3UTR GCA 90 bp | TGCACAAACAACTGCACAAATTGCAAGGGAAACAGCCCGAGGAGCTaGAGGTGTCCATTCTCCTTGTCAGGGCCGGCCAGCAGCAGCAGG | + |
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Preference number: 1 (lower is better) Translates to: CTNNCTNCKGNSPRS*RCPFSLSGPASSSR Trigger: CCTGCTGCTGCTGGCCGGCCCTGACAAGGAGAATGGACACCTGCAGCTCCTCGGGCTGTTTCCCTTGCAATTTGTGCAGTTGTTTGTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206398.2 |
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| 3UTR TCA 90 bp | GCTGACTTGATTTCTGGTCCTTTGGCGATCTGGAAGGATCTTGTCTaGGTCAGAGCCCCCAGAGTTCTGAGACCTGCGGGTCGAGTCTGG | + |
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Preference number: 1 (lower is better) Translates to: ADLISGPLAIWKDLV*VRAPRVLRPAGRVW Trigger: CCAGACTCGACCCGCAGGTCTCAGAACTCTGGGGGCTCTGACTCAGACAAGATCCTTCCAGATCGCCAAAGGACCAGAAATCAAGTCAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000205359.2 ENSMUST00000206398.2 |
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| 3UTR TCA 90 bp | GTCGAGTCTGGCCTCTGTGGCTTGAAACTAAGAAGAGTGTACATCTaGGAGCCTGACCAGCATGAGGGTCTGGGTTTGAGAGAGGTGGGC | + |
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Preference number: 1 (lower is better) Translates to: VESGLCGLKLRRVYI*EPDQHEGLGLREVG Trigger: GCCCACCTCTCTCAAACCCAGACCCTCATGCTGGTCAGGCTCTCAGATGTACACTCTTCTTAGTTTCAAGCCACAGAGGCCAGACTCGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205359.2 |
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| 3UTR GCA 90 bp | TTGAGCTGCTGGCGGCTCTCATCATGCACAAACAACTGCACAAATTaGAAGGGAAACAGCCCGAGGAGCTGCAGGTGTCCATTCTCCTTG | + |
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Preference number: 1 (lower is better) Translates to: LSCWRLSSCTNNCTN*KGNSPRSCRCPFSL Trigger: CAAGGAGAATGGACACCTGCAGCTCCTCGGGCTGTTTCCCTTGCAATTTGTGCAGTTGTTTGTGCATGATGAGAGCCGCCAGCAGCTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206398.2 |
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| 3UTR TCA 90 bp | TCTTTATTAAGTTTAAAATTCCATCTCTCTGGCTCTGAGCTGAGCTaGCTTGATTTCTGGTCCTTTGGCGATCTGGAAGGATCTTGTCTG | + |
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Preference number: 1 (lower is better) Translates to: SLLSLKFHLSGSELS*LDFWSFGDLEGSCL Trigger: CAGACAAGATCCTTCCAGATCGCCAAAGGACCAGAAATCAAGTCAGCTCAGCTCAGAGCCAGAGAGATGGAATTTTAAACTTAATAAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107927.5 ENSMUST00000205359.2 ENSMUST00000206398.2 |
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| 3UTR CAA 90 bp | GACCTGCGGGTCGAGTCTGGCCTCTGTGGCTTGAAACTCCGGGGGTaGCAACTGCCCCTCCTTGACTTCCTCCTCCTCCTCCTCCTCCTC | + |
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Preference number: 2 (lower is better) Translates to: DLRVESGLCGLKLRG*QLPLLDFLLLLLLL Trigger: GAGGAGGAGGAGGAGGAGGAGGAAGTCAAGGAGGGGCAGTTGCAACCCCCGGAGTTTCAAGCCACAGAGGCCAGACTCGACCCGCAGGTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206398.2 |
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| 3UTR-3UTR TCA 90 bp | CTCCTCCTCCTCTTCCTCAGGCGCAGTGTCCTCGTGCGTGAAGGGCACTGCGCACTGCCACCCCCATGGTaGCCTTGTTGGCGACTTCTC | + |
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Preference number: 2 (lower is better) Translates to: LLLLFLRRSVLVREGHCALPPPW*PCWRLL Trigger: GAGAAGTCGCCAACAAGGTCACCATGGGGGTGGCAG...TGCGCAGTGCCCTTCACGCACGAGGACACTGCGCCTGAGGAAGAGGAGGAGGAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206398.2 |
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| 3UTR CAA 90 bp | AATTGCAAGGGAAACAGCCCGAGGAGCTGCAGGTGTCCATTCTCCTaGTCAGGGCCGGCCAGCAGCAGCAGGTCTGGCAGCTCCAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: NCKGNSPRSCRCPFS*SGPASSSRSGSSRA Trigger: TGCCCTGGAGCTGCCAGACCTGCTGCTGCTGGCCGGCCCTGACAAGGAGAATGGACACCTGCAGCTCCTCGGGCTGTTTCCCTTGCAATT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206398.2 |
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| 3UTR CAA 90 bp | CCAGCGGCCAAACTCGCAGTCGCGGGTCTCTGGAGGAGAGCGCAGTaGCAAGTAGAAGGCGCGGCCAGTTCGGAACTTGACCTTGAGCTG | + |
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Preference number: 2 (lower is better) Translates to: PAAKLAVAGLWRRAQ*QVEGAASSELDLEL Trigger: CAGCTCAAGGTCAAGTTCCGAACTGGCCGCGCCTTCTACTTGCAACTGCGCTCTCCTCCAGAGACCCGCGACTGCGAGTTTGGCCGCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206398.2 |
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| 3UTR-3UTR TCA 90 bp | GAGTCTGGCCTCTGTGGCTTGAAACTCCGGGGGTTGCAACTGCCCCTCCTTGACGAGCCCCCAGAGTTCTaGGACCTGCGGGTCGAGTCT | + |
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Preference number: 2 (lower is better) Translates to: ESGLCGLKLRGLQLPLLDEPPEF*DLRVES Trigger: AGACTCGACCCGCAGGTCTCAGAACTCTGGGGGCTC...GTCAAGGAGGGGCAGTTGCAACCCCCGGAGTTTCAAGCCACAGAGGCCAGACTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000206398.2 |
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| 3UTR-3UTR TCA 90 bp | TGTCTGAGTCAGAGCCCCCAGAGTTCTGAGACCTGCGGGTCGAGTCTGGCCTCTATGAGGGTCTGGGTTTaGGAGAGGTGGGCCTGTGGG | + |
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Preference number: 2 (lower is better) Translates to: CLSQSPQSSETCGSSLASMRVWV*ERWACG Trigger: CCCACAGGCCCACCTCTCTCAAACCCAGACCCTCAT...AGAGGCCAGACTCGACCCGCAGGTCTCAGAACTCTGGGGGCTCTGACTCAGACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205359.2 |
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| 3UTR-3UTR GCA 90 bp | AGAGTTCTGAGACCTGCGGGTCGAGTCTGGCCTCTGTGGCTTGAAACTCCGGGGGGCAGGACTAGAGGCTaGCACCCCCATGGTGACCTT | + |
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Preference number: 2 (lower is better) Translates to: RVLRPAGRVWPLWLETPGGRTRG*HPHGDL Trigger: AAGGTCACCATGGGGGTGGCAGCCTCTAGTCCTGCC...CCCCGGAGTTTCAAGCCACAGAGGCCAGACTCGACCCGCAGGTCTCAGAACTCT 61% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000206398.2 |
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| 3UTR-3UTR GCA 90 bp | CAGGCGGTAGAGCAGCCGCACCCAGCGGCCAAACTCGCAGTCGCGGGTCTCTGGAACAACTGCACAAATTaGAAGGGAAACAGCCCGAGG | + |
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Preference number: 2 (lower is better) Translates to: QAVEQPHPAAKLAVAGLWNNCTN*KGNSPR Trigger: CCTCGGGCTGTTTCCCTTGCAATTTGTGCAGTTGTT...CCAGAGACCCGCGACTGCGAGTTTGGCCGCTGGGTGCGGCTGCTCTACCGCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206398.2 |
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| 3UTR-3UTR CCA 90 bp | CATGAGGGTCTGGGTTTGAGAGAGGTGGGCCTGTGGGCGTCTTGGGAAGAGGCCGTGCCAGGCAAAGGCTaGGAGATGGCTGTGTGGTTT | + |
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Preference number: 2 (lower is better) Translates to: HEGLGLREVGLWASWEEAVPGKG*EMAVWF Trigger: AAACCACACAGCCATCTCCCAGCCTTTGCCTGGCAC...GGCCTCTTCCCAAGACGCCCACAGGCCCACCTCTCTCAAACCCAGACCCTCATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205359.2 |
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| 3UTR-3UTR CCA 90 bp | TGTGGCTTGAAACTCCGGGGGTTGCAACTGCCCCTCCTTGACTTCCTCCTCCTCCCTGCGGGTCGAGTCTaGCCTCTGTGGCTTGAAACT | + |
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Preference number: 2 (lower is better) Translates to: CGLKLRGLQLPLLDFLLLPAGRV*PLWLET Trigger: AGTTTCAAGCCACAGAGGCCAGACTCGACCCGCAGG...GAGGAGGAGGAAGTCAAGGAGGGGCAGTTGCAACCCCCGGAGTTTCAAGCCACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206398.2 |
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| 3UTR-3UTR CCA 90 bp | CATGAGGGTCTGGGTTTGAGAGAGGTGGGCCTGTGGGCGTCTTGGGAAGAGGCCTGGGAGATGGCTGTGTaGTTTCTTTTAGGGCACCTG | + |
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Preference number: 2 (lower is better) Translates to: HEGLGLREVGLWASWEEAWEMAV*FLLGHL Trigger: CAGGTGCCCTAAAAGAAACCACACAGCCATCTCCCA...GGCCTCTTCCCAAGACGCCCACAGGCCCACCTCTCTCAAACCCAGACCCTCATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205359.2 |
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| 3UTR-3UTR TCA 90 bp | GCCAAACTCGCAGTCGCGGGTCTCTGGAGGAGAGCGCAGTTGCAAGTAGAAGGCGGCTCTGAGCTGAGCTaGCTTGATTTCTGGTCCTTT | + |
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Preference number: 2 (lower is better) Translates to: AKLAVAGLWRRAQLQVEGGSELS*LDFWSF Trigger: AAAGGACCAGAAATCAAGTCAGCTCAGCTCAGAGCC...GCCTTCTACTTGCAACTGCGCTCTCCTCCAGAGACCCGCGACTGCGAGTTTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206398.2 |
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| 3UTR-3UTR CCA 90 bp | CATCCTCAGTTCCCCTTTCAGGGAACTGGACATGTACGGCCAGCTGTAGCCCACTCCCTAGAACCCACTTaGTGCCAAGAACCCACTTGG | + |
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Preference number: 2 (lower is better) Translates to: HPQFPFQGTGHVRPAVAHSLEPT*CQEPTW Trigger: CCAAGTGGGTTCTTGGCACCAAGTGGGTTCTAGGGA...GTGGGCTACAGCTGGCCGTACATGTCCAGTTCCCTGAAAGGGGAACTGAGGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205359.2 |
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| 3UTR-3UTR TCA 90 bp | CATCCTCAGTTCCCCTTTCAGGGAACTGGACATGTACGGCCAGCTGTAGCCCACGGCTCTGAGCTGAGCTaGCTTGATTTCTGGTCCTTT | + |
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Preference number: 2 (lower is better) Translates to: HPQFPFQGTGHVRPAVAHGSELS*LDFWSF Trigger: AAAGGACCAGAAATCAAGTCAGCTCAGCTCAGAGCC...GTGGGCTACAGCTGGCCGTACATGTCCAGTTCCCTGAAAGGGGAACTGAGGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205359.2 |
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| 3UTR CAA 90 bp | CTTGAGCTGCTGGCGGCTCTCATCATGCACAAACAACTGCACAAATaGCAAGGGAAACAGCCCGAGGAGCTGCAGGTGTCCATTCTCCTT | + |
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Preference number: 2 (lower is better) Translates to: LELLAALIMHKQLHK*QGKQPEELQVSILL Trigger: AAGGAGAATGGACACCTGCAGCTCCTCGGGCTGTTTCCCTTGCAATTTGTGCAGTTGTTTGTGCATGATGAGAGCCGCCAGCAGCTCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206398.2 |
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| 3UTR-3UTR CCA 90 bp | TCACCTTCCACAACTGTCATCCTCAGTTCCCCTTTCAGGGAACTGGACATGTACTGCCAAGAACCCACTTaGTGCCAGGCAAAGGCTGGG | + |
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Preference number: 2 (lower is better) Translates to: SPSTTVILSSPFRELDMYCQEPT*CQAKAG Trigger: CCCAGCCTTTGCCTGGCACCAAGTGGGTTCTTGGCA...GTACATGTCCAGTTCCCTGAAAGGGGAACTGAGGATGACAGTTGTGGAAGGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205359.2 |
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| 3UTR-3UTR TCA 90 bp | TCACCTTCCACAACTGTCATCCTCAGTTCCCCTTTCAGGGAACTGGACATGTACTCTCTGGCTCTGAGCTaGGCTGACTTGATTTCTGGT | + |
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Preference number: 2 (lower is better) Translates to: SPSTTVILSSPFRELDMYSLALS*ADLISG Trigger: ACCAGAAATCAAGTCAGCTCAGCTCAGAGCCAGAGA...GTACATGTCCAGTTCCCTGAAAGGGGAACTGAGGATGACAGTTGTGGAAGGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205359.2 |
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| 3UTR-3UTR TCA 90 bp | TTGAGCTGCTGGCGGCTCTCATCATGCACAAACAACTGCACAAATTGCAAGGGATCTCTGGCTCTGAGCTaGGCTGACTTGATTTCTGGT | + |
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Preference number: 2 (lower is better) Translates to: LSCWRLSSCTNNCTNCKGSLALS*ADLISG Trigger: ACCAGAAATCAAGTCAGCTCAGCTCAGAGCCAGAGA...TCCCTTGCAATTTGTGCAGTTGTTTGTGCATGATGAGAGCCGCCAGCAGCTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206398.2 |
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| 3UTR CCA 72 bp | CCGCACCCAGCGGCCAAACTCGCAGTCGCGGGTCTCTaGAGGAGAGCGCAGTTGCAAGTAGAAGGCGCGGCC | + |
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Preference number: 3 (lower is better) Translates to: PHPAAKLAVAGL*RRAQLQVEGAA Trigger: GGCCGCGCCTTCTACTTGCAACTGCGCTCTCCTCCAGAGACCCGCGACTGCGAGTTTGGCCGCTGGGTGCGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206398.2 |
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| 3UTR TCA 72 bp | CCTCCTCCTCTTCCTCAGGCGCAGTGTCCTCGTGCGTaGAGGGCACTGCGCAGGTGGGCGAGTGGAATCGCA | + |
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Preference number: 3 (lower is better) Translates to: PPPLPQAQCPRA*RALRRWASGIA Trigger: TGCGATTCCACTCGCCCACCTGCGCAGTGCCCTTCACGCACGAGGACACTGCGCCTGAGGAAGAGGAGGAGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206398.2 |
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| 3UTR GCA 72 bp | TTCCTCAGGCGCAGTGTCCTCGTGCGTGAAGGGCACTaGGCAGGTGGGCGAGTGGAATCGCAGGCGGTAGAG | + |
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Preference number: 3 (lower is better) Translates to: FLRRSVLVREGH*AGGRVESQAVE Trigger: CTCTACCGCCTGCGATTCCACTCGCCCACCTGCGCAGTGCCCTTCACGCACGAGGACACTGCGCCTGAGGAA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206398.2 |
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| 3UTR GCA 72 bp | CAGCAGGTCTGGCAGCTCCAGGGCAGGACTAGAGGCTaGCACCCCCATGGTGACCTTGTTGGCGACTTCTCC | + |
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Preference number: 3 (lower is better) Translates to: QQVWQLQGRTRG*HPHGDLVGDFS Trigger: GGAGAAGTCGCCAACAAGGTCACCATGGGGGTGGCAGCCTCTAGTCCTGCCCTGGAGCTGCCAGACCTGCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206398.2 |
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| 3UTR-3UTR CAA 90 bp | AGAGCCCCCAGAGTTCTGAGACCTGCGGGTCGAGTCTGGCCTCTGTGGCTTGAAGTGCCAAGAACCCACTaGGTGCCAGGCAAAGGCTGG | + |
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Preference number: 3 (lower is better) Translates to: RAPRVLRPAGRVWPLWLEVPRTH*VPGKGW Trigger: CCAGCCTTTGCCTGGCACCAAGTGGGTTCTTGGCAC...TTCAAGCCACAGAGGCCAGACTCGACCCGCAGGTCTCAGAACTCTGGGGGCTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205359.2 |
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| 3UTR TCA 72 bp | TCTGAGACCTGCGGGTCGAGTCTGGCCTCTGTGGCTTaGAACTCCGGGGGTTGCAACTGCCCCTCCTTGACT | + |
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Preference number: 3 (lower is better) Translates to: SETCGSSLASVA*NSGGCNCPSLT Trigger: AGTCAAGGAGGGGCAGTTGCAACCCCCGGAGTTTCAAGCCACAGAGGCCAGACTCGACCCGCAGGTCTCAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206398.2 |
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| 3UTR CCA 72 bp | AGAGCCCCCAGAGTTCTGAGACCTGCGGGTCGAGTCTaGCCTCTGTGGCTTGAAACTCCGGGGGTTGCAACT | + |
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Preference number: 3 (lower is better) Translates to: RAPRVLRPAGRV*PLWLETPGVAT Trigger: AGTTGCAACCCCCGGAGTTTCAAGCCACAGAGGCCAGACTCGACCCGCAGGTCTCAGAACTCTGGGGGCTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000206398.2 |
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| 3UTR CCA 72 bp | CAGCATGAGGGTCTGGGTTTGAGAGAGGTGGGCCTGTaGGCGTCTTGGGAAGAGGCCTCACCTTCCACAACT | + |
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Preference number: 3 (lower is better) Translates to: QHEGLGLREVGL*ASWEEASPSTT Trigger: AGTTGTGGAAGGTGAGGCCTCTTCCCAAGACGCCCACAGGCCCACCTCTCTCAAACCCAGACCCTCATGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205359.2 |
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| 3UTR-3UTR CAA 90 bp | TGTGGCTTGAAACTCCGGGGGTTGCAACTGCCCCTCCTTGACTTCCTCCTCCTCACCCCCATGGTGACCTaGTTGGCGACTTCTCCAAAC | + |
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Preference number: 3 (lower is better) Translates to: CGLKLRGLQLPLLDFLLLTPMVT*LATSPN Trigger: GTTTGGAGAAGTCGCCAACAAGGTCACCATGGGGGT...GAGGAGGAGGAAGTCAAGGAGGGGCAGTTGCAACCCCCGGAGTTTCAAGCCACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000206398.2 |
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| 3UTR GCA 72 bp | AACTGCACAAATTGCAAGGGAAACAGCCCGAGGAGCTaGAGGTGTCCATTCTCCTTGTCAGGGCCGGCCAGC | + |
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Preference number: 3 (lower is better) Translates to: NCTNCKGNSPRS*RCPFSLSGPAS Trigger: GCTGGCCGGCCCTGACAAGGAGAATGGACACCTGCAGCTCCTCGGGCTGTTTCCCTTGCAATTTGTGCAGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206398.2 |
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| 3UTR CCA 72 bp | CTCTCCCTAGAACCCACTTGGTGCCAAGAACCCACTTaGTGCCAGGCAAAGGCTGGGAGATGGCTGTGTGGT | + |
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Preference number: 3 (lower is better) Translates to: LSLEPTWCQEPT*CQAKAGRWLCG Trigger: ACCACACAGCCATCTCCCAGCCTTTGCCTGGCACCAAGTGGGTTCTTGGCACCAAGTGGGTTCTAGGGAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205359.2 |
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| 3UTR GCA 72 bp | TCCCTAGAACCCACTTGGTGCCAAGAACCCACTTGGTaGCAGGCAAAGGCTGGGAGATGGCTGTGTGGTTTC | + |
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Preference number: 3 (lower is better) Translates to: SLEPTWCQEPTW*QAKAGRWLCGF Trigger: GAAACCACACAGCCATCTCCCAGCCTTTGCCTGGCACCAAGTGGGTTCTTGGCACCAAGTGGGTTCTAGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205359.2 |
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| 3UTR TCA 72 bp | ATTTCTGGTCCTTTGGCGATCTGGAAGGATCTTGTCTaGGTCAGAGCCCCCAGAGTTCTGAGACCTGCGGGT | + |
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Preference number: 3 (lower is better) Translates to: ISGPLAIWKDLV*VRAPRVLRPAG Trigger: ACCCGCAGGTCTCAGAACTCTGGGGGCTCTGACTCAGACAAGATCCTTCCAGATCGCCAAAGGACCAGAAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000205359.2 ENSMUST00000206398.2 |
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| 3UTR GCA 72 bp | TTGAGCTGCTGGCGGCTCTCATCATGCACAAACAACTaGACAAATTGCAAGGGAAACAGCCCGAGGAGCTGC | + |
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Preference number: 3 (lower is better) Translates to: LSCWRLSSCTNN*TNCKGNSPRSC Trigger: GCAGCTCCTCGGGCTGTTTCCCTTGCAATTTGTGCAGTTGTTTGTGCATGATGAGAGCCGCCAGCAGCTCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206398.2 |
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| 3UTR CCA 72 bp | AGAGCCCCCAGAGTTCTGAGACCTGCGGGTCGAGTCTaGCCTCTGTGGCTTGAAACTAAGAAGAGTGTACAT | + |
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Preference number: 3 (lower is better) Translates to: RAPRVLRPAGRV*PLWLETKKSVH Trigger: ATGTACACTCTTCTTAGTTTCAAGCCACAGAGGCCAGACTCGACCCGCAGGTCTCAGAACTCTGGGGGCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205359.2 |
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| 3UTR TCA 72 bp | GGCCTCTGTGGCTTGAAACTAAGAAGAGTGTACATCTaGGAGCCTGACCAGCATGAGGGTCTGGGTTTGAGA | + |
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Preference number: 3 (lower is better) Translates to: GLCGLKLRRVYI*EPDQHEGLGLR Trigger: TCTCAAACCCAGACCCTCATGCTGGTCAGGCTCTCAGATGTACACTCTTCTTAGTTTCAAGCCACAGAGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205359.2 |
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| 3UTR CCA 72 bp | AAAAGCCCAGCGGGCTCAGAGGTGATGTGGATCACTTaGAAAGAACGACAAATGATGGGGGAGATCCGTACA | + |
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Preference number: 3 (lower is better) Translates to: KSPAGSEVMWIT*KERQMMGEIRT Trigger: TGTACGGATCTCCCCCATCATTTGTCGTTCTTTCCAAGTGATCCACATCACCTCTGAGCCCGCTGGGCTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000205422.2 |
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| 3UTR CCA 72 bp | GAAGACACAAAAAGCCCAGCGGGCTCAGAGGTGATGTaGATCACTTGGAAAGAACGACAAATGATGGGGGAG | + |
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Preference number: 3 (lower is better) Translates to: EDTKSPAGSEVM*ITWKERQMMGE Trigger: CTCCCCCATCATTTGTCGTTCTTTCCAAGTGATCCACATCACCTCTGAGCCCGCTGGGCTTTTTGTGTCTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000205422.2 |
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| 3UTR TCA 72 bp | AGTTTAAAATTCCATCTCTCTGGCTCTGAGCTGAGCTaGCTTGATTTCTGGTCCTTTGGCGATCTGGAAGGA | + |
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Preference number: 3 (lower is better) Translates to: SLKFHLSGSELS*LDFWSFGDLEG Trigger: TCCTTCCAGATCGCCAAAGGACCAGAAATCAAGTCAGCTCAGCTCAGAGCCAGAGAGATGGAATTTTAAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107927.5 ENSMUST00000205359.2 ENSMUST00000206398.2 |
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| CDS-3UTR CCA 90 bp | CAGGCGGTAGAGCAGCCGCACCCAGCGGCCAAACTCGCAGTCGCGGGTCTCTGGCTCAGGAGGTGGCGTTaGAGGCGCCCAGGGCGGCAC | + |
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Preference number: 4 (lower is better) Translates to: QAVEQPHPAAKLAVAGLWLRRWR*RRPGRH Trigger: GTGCCGCCCTGGGCGCCTCCAACGCCACCTCCTGAG...CCAGAGACCCGCGACTGCGAGTTTGGCCGCTGGGTGCGGCTGCTCTACCGCCTG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206398.2 |
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| CDS-3UTR CCA 90 bp | TGTCTGAGTCAGAGCCCCCAGAGTTCTGAGACCTGCGGGTCGAGTCTGGCCTCTCTCAGGAGGTGGCGTTaGAGGCGCCCAGGGCGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: CLSQSPQSSETCGSSLASLRRWR*RRPGRH Trigger: GTGCCGCCCTGGGCGCCTCCAACGCCACCTCCTGAG...AGAGGCCAGACTCGACCCGCAGGTCTCAGAACTCTGGGGGCTCTGACTCAGACA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000205359.2 ENSMUST00000206398.2 |
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| CDS-3UTR TCA 90 bp | GAGCCTGACCAGCATGAGGGTCTGGGTTTGAGAGAGGTGGGCCTGTGGGCGTCTCTGCCACCCCCATGGTaGCCTTGTTGGCGACTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: EPDQHEGLGLREVGLWASLPPPW*PCWRLL Trigger: GAGAAGTCGCCAACAAGGTCACCATGGGGGTGGCAG...AGACGCCCACAGGCCCACCTCTCTCAAACCCAGACCCTCATGCTGGTCAGGCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205359.2 |
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| CDS-3UTR GCA 90 bp | TGTCTGAGTCAGAGCCCCCAGAGTTCTGAGACCTGCGGGTCGAGTCTGGCCTCTGGCAGGACTAGAGGCTaGCACCCCCATGGTGACCTT | + |
|
Preference number: 4 (lower is better) Translates to: CLSQSPQSSETCGSSLASGRTRG*HPHGDL Trigger: AAGGTCACCATGGGGGTGGCAGCCTCTAGTCCTGCC...AGAGGCCAGACTCGACCCGCAGGTCTCAGAACTCTGGGGGCTCTGACTCAGACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000205359.2 |
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| 3UTR CAA 72 bp | GGGTCTGGGTTTGAGAGAGGTGGGCCTGTGGGCGTCTaGGGAAGAGGCCTCACCTTCCACAACTGTCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: GSGFERGGPVGV*GRGLTFHNCHP Trigger: AGGATGACAGTTGTGGAAGGTGAGGCCTCTTCCCAAGACGCCCACAGGCCCACCTCTCTCAAACCCAGACCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205359.2 |
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| 3UTR CAA 72 bp | AAACTCGCAGTCGCGGGTCTCTGGAGGAGAGCGCAGTaGCAAGTAGAAGGCGCGGCCAGTTCGGAACTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: KLAVAGLWRRAQ*QVEGAASSELD Trigger: GTCAAGTTCCGAACTGGCCGCGCCTTCTACTTGCAACTGCGCTCTCCTCCAGAGACCCGCGACTGCGAGTTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206398.2 |
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| CDS-3UTR GCA 90 bp | TGTCTGAGTCAGAGCCCCCAGAGTTCTGAGACCTGCGGGTCGAGTCTGGCCTCTCCGGGGCTCCACACCTaGACGAAGTTGCTTTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: CLSQSPQSSETCGSSLASPGLHT*TKLLSK Trigger: CTTTGAAAGCAACTTCGTGCAGGTGTGGAGCCCCGG...AGAGGCCAGACTCGACCCGCAGGTCTCAGAACTCTGGGGGCTCTGACTCAGACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206398.2 |
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| CDS-3UTR CCA 90 bp | GGGCTCAGAGGTGATGTGGATCACTTGGAAAGAACGACAAATGATGGGGGAGATCTCAGGAGGTGGCGTTaGAGGCGCCCAGGGCGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: GLRGDVDHLERTTNDGGDLRRWR*RRPGRH Trigger: GTGCCGCCCTGGGCGCCTCCAACGCCACCTCCTGAG...ATCTCCCCCATCATTTGTCGTTCTTTCCAAGTGATCCACATCACCTCTGAGCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205422.2 |
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| CDS-3UTR CCA 90 bp | CATCCTCAGTTCCCCTTTCAGGGAACTGGACATGTACGGCCAGCTGTAGCCCACCCTTTCCATCCTTCCTaGCCCAACATCCCTGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: HPQFPFQGTGHVRPAVAHPFHPS*PNIPGL Trigger: GAGCCCAGGGATGTTGGGCCAGGAAGGATGGAAAGG...GTGGGCTACAGCTGGCCGTACATGTCCAGTTCCCTGAAAGGGGAACTGAGGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205359.2 |
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| 3UTR CAA 72 bp | TCTCTCCCTAGAACCCACTTGGTGCCAAGAACCCACTaGGTGCCAGGCAAAGGCTGGGAGATGGCTGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SLPRTHLVPRTH*VPGKGWEMAVW Trigger: CCACACAGCCATCTCCCAGCCTTTGCCTGGCACCAAGTGGGTTCTTGGCACCAAGTGGGTTCTAGGGAGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205359.2 |
||
| CDS-3UTR CCA 90 bp | GAGCCTGACCAGCATGAGGGTCTGGGTTTGAGAGAGGTGGGCCTGTGGGCGTCTAGTTGCTTTCAAAGATaGGAAAGTCGCGCAGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: EPDQHEGLGLREVGLWASSCFQR*ESRAAG Trigger: ACCAGCTGCGCGACTTTCCCATCTTTGAAAGCAACT...AGACGCCCACAGGCCCACCTCTCTCAAACCCAGACCCTCATGCTGGTCAGGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205359.2 |
||
| CDS-3UTR CCA 90 bp | CCTGACCAGCATGAGGGTCTGGGTTTGAGAGAGGTGGGCCTGTGGGCGTCTTGGGAACCCCTAAGAAGATaGAAGAAGGGAGGAGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PDQHEGLGLREVGLWASWEPLRR*KKGGVP Trigger: AGGAACTCCTCCCTTCTTCCATCTTCTTAGGGGTTC...CCAAGACGCCCACAGGCCCACCTCTCTCAAACCCAGACCCTCATGCTGGTCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205359.2 |
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| CDS-3UTR CCA 90 bp | GAGTCTGGCCTCTGTGGCTTGAAACTCCGGGGGTTGCAACTGCCCCTCCTTGACAGTTGCTTTCAAAGATaGGAAAGTCGCGCAGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: ESGLCGLKLRGLQLPLLDSCFQR*ESRAAG Trigger: ACCAGCTGCGCGACTTTCCCATCTTTGAAAGCAACT...GTCAAGGAGGGGCAGTTGCAACCCCCGGAGTTTCAAGCCACAGAGGCCAGACTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206398.2 |
||
| 3UTR CAA 72 bp | CTGGCGGCTCTCATCATGCACAAACAACTGCACAAATaGCAAGGGAAACAGCCCGAGGAGCTGCAGGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LAALIMHKQLHK*QGKQPEELQVS Trigger: GGACACCTGCAGCTCCTCGGGCTGTTTCCCTTGCAATTTGTGCAGTTGTTTGTGCATGATGAGAGCCGCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206398.2 |
||
| CDS-3UTR GCA 90 bp | CATCCTCAGTTCCCCTTTCAGGGAACTGGACATGTACGGCCAGCTGTAGCCCACAACAACTGCACAAATTaGAAGGGAAACAGCCCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: HPQFPFQGTGHVRPAVAHNNCTN*KGNSPR Trigger: CCTCGGGCTGTTTCCCTTGCAATTTGTGCAGTTGTT...GTGGGCTACAGCTGGCCGTACATGTCCAGTTCCCTGAAAGGGGAACTGAGGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205359.2 |
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| CDS-3UTR GCA 90 bp | GGCCTCTGTGGCTTGAAACTCCGGGGGTTGCAACTGCCCCTCCTTGACTTCCTCACACCTGCACGAAGTTaGTTTCAAAGATGGGAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: GLCGLKLRGLQLPLLDFLTPARS*FQRWES Trigger: ACTTTCCCATCTTTGAAAGCAACTTCGTGCAGGTGT...GAGGAAGTCAAGGAGGGGCAGTTGCAACCCCCGGAGTTTCAAGCCACAGAGGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206398.2 |
||
| CDS-3UTR GCA 90 bp | AAGCCCAGCGGGCTCAGAGGTGATGTGGATCACTTGGAAAGAACGACAAATGATCCGGGGCTCCACACCTaGACGAAGTTGCTTTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: KPSGLRGDVDHLERTTNDPGLHT*TKLLSK Trigger: CTTTGAAAGCAACTTCGTGCAGGTGTGGAGCCCCGG...ATCATTTGTCGTTCTTTCCAAGTGATCCACATCACCTCTGAGCCCGCTGGGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205422.2 |
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| CDS-3UTR GCA 90 bp | GCCAGGCAAAGGCTGGGAGATGGCTGTGTGGTTTCTTTTAGGGCACCTGGGCTATCACCTGCACGAAGTTaGTTTCAAAGATGGGAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: ARQRLGDGCVVSFRAPGLSPARS*FQRWES Trigger: ACTTTCCCATCTTTGAAAGCAACTTCGTGCAGGTGA...TAGCCCAGGTGCCCTAAAAGAAACCACACAGCCATCTCCCAGCCTTTGCCTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205359.2 |
||
| CDS-3UTR CCA 90 bp | CCCAGCGGGCTCAGAGGTGATGTGGATCACTTGGAAAGAACGACAAATGATGGGAGTTGCTTTCAAAGATaGGAAAGTCGCGCAGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PSGLRGDVDHLERTTNDGSCFQR*ESRAAG Trigger: ACCAGCTGCGCGACTTTCCCATCTTTGAAAGCAACT...CCCATCATTTGTCGTTCTTTCCAAGTGATCCACATCACCTCTGAGCCCGCTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205422.2 |
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| CDS-3UTR CCA 90 bp | GCGGGTCGAGTCTGGCCTCTGTGGCTTGAAACTAAGAAGAGTGTACATCTGAGACTAGAGATCCAGGACTaGTTTTCCTTCCTCAGACCC | + |
|
Preference number: 4 (lower is better) Translates to: AGRVWPLWLETKKSVHLRLEIQD*FSFLRP Trigger: GGGTCTGAGGAAGGAAAACCAGTCCTGGATCTCTAG...TCTCAGATGTACACTCTTCTTAGTTTCAAGCCACAGAGGCCAGACTCGACCCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205359.2 |
||
| 3UTR CAA 72 bp | AAAAAGCCCAGCGGGCTCAGAGGTGATGTGGATCACTaGGAAAGAACGACAAATGATGGGGGAGATCCGTAC | + |
|
Preference number: 4 (lower is better) Translates to: KKPSGLRGDVDH*ERTTNDGGDPY Trigger: GTACGGATCTCCCCCATCATTTGTCGTTCTTTCCAAGTGATCCACATCACCTCTGAGCCCGCTGGGCTTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000205422.2 |
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| CDS-3UTR CCA 90 bp | GTAGGTTTTAAGAGCCTGATCTTTATTAAGTTTAAAATTCCATCTCTCTGGCTCCTCAGGAGGTGGCGTTaGAGGCGCCCAGGGCGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: VGFKSLIFIKFKIPSLWLLRRWR*RRPGRH Trigger: GTGCCGCCCTGGGCGCCTCCAACGCCACCTCCTGAG...GAGCCAGAGAGATGGAATTTTAAACTTAATAAAGATCAGGCTCTTAAAACCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107927.5 |
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| CDS-3UTR CCA 90 bp | GTAGGTTTTAAGAGCCTGATCTTTATTAAGTTTAAAATTCCATCTCTCTGGCTCTCGCCGCTCAGGAGGTaGCGTTGGAGGCGCCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: VGFKSLIFIKFKIPSLWLSPLRR*RWRRPG Trigger: CCCTGGGCGCCTCCAACGCCACCTCCTGAGCGGCGA...GAGCCAGAGAGATGGAATTTTAAACTTAATAAAGATCAGGCTCTTAAAACCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107927.5 |
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| CDS-3UTR GCA 90 bp | AGACACAAAAAGCCCAGCGGGCTCAGAGGTGATGTGGATCACTTGGAAAGAACGACACCTGCACGAAGTTaGTTTCAAAGATGGGAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: RHKKPSGLRGDVDHLERTTPARS*FQRWES Trigger: ACTTTCCCATCTTTGAAAGCAACTTCGTGCAGGTGT...CGTTCTTTCCAAGTGATCCACATCACCTCTGAGCCCGCTGGGCTTTTTGTGTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205422.2 |
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| CDS-3UTR TCA 90 bp | GTAGGTTTTAAGAGCCTGATCTTTATTAAGTTTAAAATTCCATCTCTCTGGCTCGAGCCCCCAGAGTTCTaGGACCTGCGGGTCGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VGFKSLIFIKFKIPSLWLEPPEF*DLRVES Trigger: AGACTCGACCCGCAGGTCTCAGAACTCTGGGGGCTC...GAGCCAGAGAGATGGAATTTTAAACTTAATAAAGATCAGGCTCTTAAAACCTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000107927.5 |
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| CDS-3UTR GCA 90 bp | GCGGGTCGAGTCTGGCCTCTGTGGCTTGAAACTAAGAAGAGTGTACATCTGAGATCATGCACAAACAACTaGACAAATTGCAAGGGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: AGRVWPLWLETKKSVHLRSCTNN*TNCKGN Trigger: GTTTCCCTTGCAATTTGTGCAGTTGTTTGTGCATGA...TCTCAGATGTACACTCTTCTTAGTTTCAAGCCACAGAGGCCAGACTCGACCCGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205359.2 |
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| CDS-3UTR TCA 90 bp | GTAGGTTTTAAGAGCCTGATCTTTATTAAGTTTAAAATTCCATCTCTCTGGCTCCTGCCACCCCCATGGTaGCCTTGTTGGCGACTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VGFKSLIFIKFKIPSLWLLPPPW*PCWRLL Trigger: GAGAAGTCGCCAACAAGGTCACCATGGGGGTGGCAG...GAGCCAGAGAGATGGAATTTTAAACTTAATAAAGATCAGGCTCTTAAAACCTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000107927.5 |
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| CDS-3UTR TCA 90 bp | GTAGGTTTTAAGAGCCTGATCTTTATTAAGTTTAAAATTCCATCTCTCTGGCTCCTGGCCTCTGTGGCTTaGAACTCCGGGGGTTGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: VGFKSLIFIKFKIPSLWLLASVA*NSGGCN Trigger: GTTGCAACCCCCGGAGTTTCAAGCCACAGAGGCCAG...GAGCCAGAGAGATGGAATTTTAAACTTAATAAAGATCAGGCTCTTAAAACCTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000107927.5 |
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| CDS-3UTR GCA 90 bp | GTAGGTTTTAAGAGCCTGATCTTTATTAAGTTTAAAATTCCATCTCTCTGGCTCGGCAGGACTAGAGGCTaGCACCCCCATGGTGACCTT | + |
|
Preference number: 4 (lower is better) Translates to: VGFKSLIFIKFKIPSLWLGRTRG*HPHGDL Trigger: AAGGTCACCATGGGGGTGGCAGCCTCTAGTCCTGCC...GAGCCAGAGAGATGGAATTTTAAACTTAATAAAGATCAGGCTCTTAAAACCTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000107927.5 |
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| CDS-3UTR GCA 90 bp | GTAGGTTTTAAGAGCCTGATCTTTATTAAGTTTAAAATTCCATCTCTCTGGCTCCAGAGTTCTGAGACCTaGGGGTCGAGTCTGGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VGFKSLIFIKFKIPSLWLQSSET*GSSLAS Trigger: AGAGGCCAGACTCGACCCGCAGGTCTCAGAACTCTG...GAGCCAGAGAGATGGAATTTTAAACTTAATAAAGATCAGGCTCTTAAAACCTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000107927.5 |
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| CDS-3UTR CCA 90 bp | GTAGGTTTTAAGAGCCTGATCTTTATTAAGTTTAAAATTCCATCTCTCTGGCTCCCTGCGGGTCGAGTCTaGCCTCTGTGGCTTGAAACT | + |
|
Preference number: 4 (lower is better) Translates to: VGFKSLIFIKFKIPSLWLPAGRV*PLWLET Trigger: AGTTTCAAGCCACAGAGGCCAGACTCGACCCGCAGG...GAGCCAGAGAGATGGAATTTTAAACTTAATAAAGATCAGGCTCTTAAAACCTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107927.5 |
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| CDS-3UTR GCA 90 bp | GTAGGTTTTAAGAGCCTGATCTTTATTAAGTTTAAAATTCCATCTCTCTGGCTCAACAGCCCGAGGAGCTaGAGGTGTCCATTCTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: VGFKSLIFIKFKIPSLWLNSPRS*RCPFSL Trigger: CAAGGAGAATGGACACCTGCAGCTCCTCGGGCTGTT...GAGCCAGAGAGATGGAATTTTAAACTTAATAAAGATCAGGCTCTTAAAACCTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107927.5 |
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| CDS-3UTR GCA 90 bp | GTAGGTTTTAAGAGCCTGATCTTTATTAAGTTTAAAATTCCATCTCTCTGGCTCAACAACTGCACAAATTaGAAGGGAAACAGCCCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VGFKSLIFIKFKIPSLWLNNCTN*KGNSPR Trigger: CCTCGGGCTGTTTCCCTTGCAATTTGTGCAGTTGTT...GAGCCAGAGAGATGGAATTTTAAACTTAATAAAGATCAGGCTCTTAAAACCTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107927.5 |
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| CDS-3UTR CCA 90 bp | GTAGGTTTTAAGAGCCTGATCTTTATTAAGTTTAAAATTCCATCTCTCTGGCTCAGTTGCTTTCAAAGATaGGAAAGTCGCGCAGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: VGFKSLIFIKFKIPSLWLSCFQR*ESRAAG Trigger: ACCAGCTGCGCGACTTTCCCATCTTTGAAAGCAACT...GAGCCAGAGAGATGGAATTTTAAACTTAATAAAGATCAGGCTCTTAAAACCTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107927.5 |
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| CDS-3UTR GCA 90 bp | GTAGGTTTTAAGAGCCTGATCTTTATTAAGTTTAAAATTCCATCTCTCTGGCTCTCACCTGCACGAAGTTaGTTTCAAAGATGGGAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: VGFKSLIFIKFKIPSLWLSPARS*FQRWES Trigger: ACTTTCCCATCTTTGAAAGCAACTTCGTGCAGGTGA...GAGCCAGAGAGATGGAATTTTAAACTTAATAAAGATCAGGCTCTTAAAACCTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107927.5 |
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| CDS-3UTR GCA 90 bp | GTAGGTTTTAAGAGCCTGATCTTTATTAAGTTTAAAATTCCATCTCTCTGGCTCTCATGCACAAACAACTaGACAAATTGCAAGGGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: VGFKSLIFIKFKIPSLWLSCTNN*TNCKGN Trigger: GTTTCCCTTGCAATTTGTGCAGTTGTTTGTGCATGA...GAGCCAGAGAGATGGAATTTTAAACTTAATAAAGATCAGGCTCTTAAAACCTAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107927.5 |
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| CDS CCA 90 bp | GCAGGCCTACCTGGTCCCTTTCCATCCTTCCTGGCCCAACATCCCTaGGCTCGAGGTCCCGCCCTCACCTCCGGGGGTTGCAACTGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: AGLPGPFPSFLAQHP*ARGPALTSGGCNCP Trigger: GGGGCAGTTGCAACCCCCGGAGGTGAGGGCGGGACCTCGAGCCCAGGGATGTTGGGCCAGGAAGGATGGAAAGGGACCAGGTAGGCCTGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205359.2 |
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| CDS-3UTR CAA 90 bp | CATGAGGGTCTGGGTTTGAGAGAGGTGGGCCTGTGGGCGTCTTGGGAAGAGGCCAGGTGTCCATTCTCCTaGTCAGGGCCGGCCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: HEGLGLREVGLWASWEEARCPFS*SGPASS Trigger: GCTGCTGGCCGGCCCTGACAAGGAGAATGGACACCT...GGCCTCTTCCCAAGACGCCCACAGGCCCACCTCTCTCAAACCCAGACCCTCATG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205359.2 |
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| CDS CCA 90 bp | CACACCTGCACGAAGTTGCTTTCAAAGATGGGAAAGTCGCGCAGCTaGTCGAACTCGCCGCTCAGGAGGTGGCGTTGGAGGCGCCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: HTCTKLLSKMGKSRS*SNSPLRRWRWRRPG Trigger: CCCTGGGCGCCTCCAACGCCACCTCCTGAGCGGCGAGTTCGACCAGCTGCGCGACTTTCCCATCTTTGAAAGCAACTTCGTGCAGGTGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205422.2 ENSMUST00000206398.2 |
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| CDS CCA 90 bp | TCGGAGGTCCGGGGCTCCACACCTGCACGAAGTTGCTTTCAAAGATaGGAAAGTCGCGCAGCTGGTCGAACTCGCCGCTCAGGAGGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: SEVRGSTPARSCFQR*ESRAAGRTRRSGGG Trigger: GCCACCTCCTGAGCGGCGAGTTCGACCAGCTGCGCGACTTTCCCATCTTTGAAAGCAACTTCGTGCAGGTGTGGAGCCCCGGACCTCCGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205422.2 ENSMUST00000206398.2 |
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| CDS-3UTR CAA 90 bp | CATGAGGGTCTGGGTTTGAGAGAGGTGGGCCTGTGGGCGTCTTGGGAAGAGGCCACCCCCATGGTGACCTaGTTGGCGACTTCTCCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: HEGLGLREVGLWASWEEATPMVT*LATSPN Trigger: GTTTGGAGAAGTCGCCAACAAGGTCACCATGGGGGT...GGCCTCTTCCCAAGACGCCCACAGGCCCACCTCTCTCAAACCCAGACCCTCATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205359.2 |
||
| CDS CCA 90 bp | CGACTTCTCCAAACCGGGTCACCTGCACGAAGTTGCTTTCAAAGATaGGAAAGTCGCGCAGCTGGTCGAACTCGCCGCTCAGGAGGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: RLLQTGSPARSCFQR*ESRAAGRTRRSGGG Trigger: GCCACCTCCTGAGCGGCGAGTTCGACCAGCTGCGCGACTTTCCCATCTTTGAAAGCAACTTCGTGCAGGTGACCCGGTTTGGAGAAGTCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107927.5 ENSMUST00000205359.2 |
||
| CDS CCA 90 bp | AAGAAGGGAGGAGTTCCTTTCTCCTTAGGCCTAGAGATCCAGGACTaGTTTTCCTTCCTCAGACCCAGAGGTCTAGGCCCCAGCCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: KKGGVPFSLGLEIQD*FSFLRPRGLGPSPP Trigger: AGGAGGGCTGGGGCCTAGACCTCTGGGTCTGAGGAAGGAAAACCAGTCCTGGATCTCTAGGCCTAAGGAGAAAGGAACTCCTCCCTTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205359.2 |
||
| CDS-3UTR CAA 90 bp | ACAAATTGCAAGGGAAACAGCCCGAGGAGCTGCAGGTGTCCATTCTCCTTGTCACACACCTGCACGAAGTaGCTTTCAAAGATGGGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: TNCKGNSPRSCRCPFSLSHTCTK*LSKMGK Trigger: CTTTCCCATCTTTGAAAGCAACTTCGTGCAGGTGTG...TGACAAGGAGAATGGACACCTGCAGCTCCTCGGGCTGTTTCCCTTGCAATTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206398.2 |
||
| CDS-3UTR CAA 90 bp | TCAGAGGTGATGTGGATCACTTGGAAAGAACGACAAATGATGGGGGAGATCCGTCACACCTGCACGAAGTaGCTTTCAAAGATGGGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: SEVMWITWKERQMMGEIRHTCTK*LSKMGK Trigger: CTTTCCCATCTTTGAAAGCAACTTCGTGCAGGTGTG...ACGGATCTCCCCCATCATTTGTCGTTCTTTCCAAGTGATCCACATCACCTCTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205422.2 |
||
| CDS-3UTR CAA 90 bp | GTAGGTTTTAAGAGCCTGATCTTTATTAAGTTTAAAATTCCATCTCTCTGGCTCAGGTGTCCATTCTCCTaGTCAGGGCCGGCCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VGFKSLIFIKFKIPSLWLRCPFS*SGPASS Trigger: GCTGCTGGCCGGCCCTGACAAGGAGAATGGACACCT...GAGCCAGAGAGATGGAATTTTAAACTTAATAAAGATCAGGCTCTTAAAACCTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107927.5 |
||
| CDS-3UTR CAA 90 bp | GTAGGTTTTAAGAGCCTGATCTTTATTAAGTTTAAAATTCCATCTCTCTGGCTCTGCAACTGCCCCTCCTaGACTTCCTCCTCCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VGFKSLIFIKFKIPSLWLCNCPS*TSSSSS Trigger: GGAGGAGGAGGAGGAAGTCAAGGAGGGGCAGTTGCA...GAGCCAGAGAGATGGAATTTTAAACTTAATAAAGATCAGGCTCTTAAAACCTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000107927.5 |
||
| CDS-3UTR CAA 90 bp | GTAGGTTTTAAGAGCCTGATCTTTATTAAGTTTAAAATTCCATCTCTCTGGCTCTCTGGCCTCTGTGGCTaGAAACTCCGGGGGTTGCAA | + |
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Preference number: 5 (lower is better) Translates to: VGFKSLIFIKFKIPSLWLSGLCG*KLRGLQ Trigger: TTGCAACCCCCGGAGTTTCAAGCCACAGAGGCCAGA...GAGCCAGAGAGATGGAATTTTAAACTTAATAAAGATCAGGCTCTTAAAACCTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000107927.5 |
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| CDS-3UTR CAA 90 bp | GTAGGTTTTAAGAGCCTGATCTTTATTAAGTTTAAAATTCCATCTCTCTGGCTCACCCCCATGGTGACCTaGTTGGCGACTTCTCCAAAC | + |
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Preference number: 5 (lower is better) Translates to: VGFKSLIFIKFKIPSLWLTPMVT*LATSPN Trigger: GTTTGGAGAAGTCGCCAACAAGGTCACCATGGGGGT...GAGCCAGAGAGATGGAATTTTAAACTTAATAAAGATCAGGCTCTTAAAACCTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000107927.5 |
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| CDS CAA 90 bp | GGCCCAACATCCCTGGGCTCGAGGTCCCGCCCTCACCTCCGGGGGTaGCAACTGCCCCTCCTTGACTTCCTCCTCCTCCTCCTCCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: GPTSLGSRSRPHLRG*QLPLLDFLLLLLLL Trigger: GAGGAGGAGGAGGAGGAGGAGGAAGTCAAGGAGGGGCAGTTGCAACCCCCGGAGGTGAGGGCGGGACCTCGAGCCCAGGGATGTTGGGCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000205359.2 |
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| CDS CCA 72 bp | CCTGGTCCCTTTCCATCCTTCCTGGCCCAACATCCCTaGGCTCGAGGTCCCGCCCTCACCTCCGGGGGTTGC | + |
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Preference number: 6 (lower is better) Translates to: PGPFPSFLAQHP*ARGPALTSGGC Trigger: GCAACCCCCGGAGGTGAGGGCGGGACCTCGAGCCCAGGGATGTTGGGCCAGGAAGGATGGAAAGGGACCAGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205359.2 |
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| CDS CAA 72 bp | CCCGCCCTCACCTCCGGGGGTTGCAACTGCCCCTCCTaGACTTCCTCCTCCTCCTCCTCCTCCTCCTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: PALTSGGCNCPS*TSSSSSSSSSS Trigger: GGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGTCAAGGAGGGGCAGTTGCAACCCCCGGAGGTGAGGGCGGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000205359.2 |
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| CDS CAA 90 bp | GCTCGAGGTCCCGCCCTCACCTCCGGGGGTTGCAACTGCCCCTCCTaGACTTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: ARGPALTSGGCNCPS*TSSSSSSSSSSSSS Trigger: GGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGTCAAGGAGGGGCAGTTGCAACCCCCGGAGGTGAGGGCGGGACCTCGAGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000205359.2 |
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| CDS CAA 72 bp | AGGGCAGGACTAGAGGCTGCCACCCCCATGGTGACCTaGTTGGCGACTTCTCCAAACCGGGTCACCTGCACG | + |
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Preference number: 6 (lower is better) Translates to: RAGLEAATPMVT*LATSPNRVTCT Trigger: CGTGCAGGTGACCCGGTTTGGAGAAGTCGCCAACAAGGTCACCATGGGGGTGGCAGCCTCTAGTCCTGCCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107927.5 ENSMUST00000205359.2 |
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| CDS CAA 72 bp | CGGGTCGGAGGTCCGGGGCTCCACACCTGCACGAAGTaGCTTTCAAAGATGGGAAAGTCGCGCAGCTGGTCG | + |
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Preference number: 6 (lower is better) Translates to: RVGGPGLHTCTK*LSKMGKSRSWS Trigger: CGACCAGCTGCGCGACTTTCCCATCTTTGAAAGCAACTTCGTGCAGGTGTGGAGCCCCGGACCTCCGACCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205422.2 ENSMUST00000206398.2 |
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| CDS CAA 90 bp | GGCAGCTCCAGGGCAGGACTAGAGGCTGCCACCCCCATGGTGACCTaGTTGGCGACTTCTCCAAACCGGGTCACCTGCACGAAGTTGCTT | + |
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Preference number: 6 (lower is better) Translates to: GSSRAGLEAATPMVT*LATSPNRVTCTKLL Trigger: AAGCAACTTCGTGCAGGTGACCCGGTTTGGAGAAGTCGCCAACAAGGTCACCATGGGGGTGGCAGCCTCTAGTCCTGCCCTGGAGCTGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107927.5 ENSMUST00000205359.2 |
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| CDS GCA 72 bp | GGGTCGGAGGTCCGGGGCTCCACACCTGCACGAAGTTaGTTTCAAAGATGGGAAAGTCGCGCAGCTGGTCGA | + |
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Preference number: 6 (lower is better) Translates to: GSEVRGSTPARS*FQRWESRAAGR Trigger: TCGACCAGCTGCGCGACTTTCCCATCTTTGAAAGCAACTTCGTGCAGGTGTGGAGCCCCGGACCTCCGACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205422.2 ENSMUST00000206398.2 |
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| CDS CAA 72 bp | GCAGGACTAGAGGCTGCCACCCCCATGGTGACCTTGTaGGCGACTTCTCCAAACCGGGTCACCTGCACGAAG | + |
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Preference number: 6 (lower is better) Translates to: AGLEAATPMVTL*ATSPNRVTCTK Trigger: CTTCGTGCAGGTGACCCGGTTTGGAGAAGTCGCCAACAAGGTCACCATGGGGGTGGCAGCCTCTAGTCCTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107927.5 ENSMUST00000205359.2 |
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| CDS CCA 72 bp | CGGGGCTCCACACCTGCACGAAGTTGCTTTCAAAGATaGGAAAGTCGCGCAGCTGGTCGAACTCGCCGCTCA | + |
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Preference number: 6 (lower is better) Translates to: RGSTPARSCFQR*ESRAAGRTRRS Trigger: TGAGCGGCGAGTTCGACCAGCTGCGCGACTTTCCCATCTTTGAAAGCAACTTCGTGCAGGTGTGGAGCCCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205422.2 ENSMUST00000206398.2 |
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| CDS CAA 90 bp | AGCTCCAGGGCAGGACTAGAGGCTGCCACCCCCATGGTGACCTTGTaGGCGACTTCTCCAAACCGGGTCACCTGCACGAAGTTGCTTTCA | + |
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Preference number: 6 (lower is better) Translates to: SSRAGLEAATPMVTL*ATSPNRVTCTKLLS Trigger: TGAAAGCAACTTCGTGCAGGTGACCCGGTTTGGAGAAGTCGCCAACAAGGTCACCATGGGGGTGGCAGCCTCTAGTCCTGCCCTGGAGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107927.5 ENSMUST00000205359.2 |
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| CDS CCA 72 bp | ACGAAGTTGCTTTCAAAGATGGGAAAGTCGCGCAGCTaGTCGAACTCGCCGCTCAGGAGGTGGCGTTGGAGG | + |
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Preference number: 6 (lower is better) Translates to: TKLLSKMGKSRS*SNSPLRRWRWR Trigger: CCTCCAACGCCACCTCCTGAGCGGCGAGTTCGACCAGCTGCGCGACTTTCCCATCTTTGAAAGCAACTTCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000107927.5 ENSMUST00000205359.2 ENSMUST00000205422.2 ENSMUST00000206398.2 |
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| CDS CAA 90 bp | GTGACCTTGTTGGCGACTTCTCCAAACCGGGTCACCTGCACGAAGTaGCTTTCAAAGATGGGAAAGTCGCGCAGCTGGTCGAACTCGCCG | + |
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Preference number: 6 (lower is better) Translates to: VTLLATSPNRVTCTK*LSKMGKSRSWSNSP Trigger: CGGCGAGTTCGACCAGCTGCGCGACTTTCCCATCTTTGAAAGCAACTTCGTGCAGGTGACCCGGTTTGGAGAAGTCGCCAACAAGGTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107927.5 ENSMUST00000205359.2 |
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| CDS CCA 72 bp | CAAACCGGGTCACCTGCACGAAGTTGCTTTCAAAGATaGGAAAGTCGCGCAGCTGGTCGAACTCGCCGCTCA | + |
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Preference number: 6 (lower is better) Translates to: QTGSPARSCFQR*ESRAAGRTRRS Trigger: TGAGCGGCGAGTTCGACCAGCTGCGCGACTTTCCCATCTTTGAAAGCAACTTCGTGCAGGTGACCCGGTTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107927.5 ENSMUST00000205359.2 |
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| CDS GCA 72 bp | TGGCGACTTCTCCAAACCGGGTCACCTGCACGAAGTTaGTTTCAAAGATGGGAAAGTCGCGCAGCTGGTCGA | + |
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Preference number: 6 (lower is better) Translates to: WRLLQTGSPARS*FQRWESRAAGR Trigger: TCGACCAGCTGCGCGACTTTCCCATCTTTGAAAGCAACTTCGTGCAGGTGACCCGGTTTGGAGAAGTCGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107927.5 ENSMUST00000205359.2 |
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| CDS GCA 72 bp | GTGACCTTGTTGGCGACTTCTCCAAACCGGGTCACCTaGACGAAGTTGCTTTCAAAGATGGGAAAGTCGCGC | + |
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Preference number: 6 (lower is better) Translates to: VTLLATSPNRVT*TKLLSKMGKSR Trigger: GCGCGACTTTCCCATCTTTGAAAGCAACTTCGTGCAGGTGACCCGGTTTGGAGAAGTCGCCAACAAGGTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107927.5 ENSMUST00000205359.2 |
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