Pregenerated sensors for FAM71B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020401Ensembl transcript IDs: ENSMUST00000063166.6
Found 109 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTAACCTTTATTATTGAAAGTGCCTTTATGGAAGCAAGCTGGACTTaGCTCCCTACTGTTCCTCTGAGCCCTGGTCTCTGGGGCTGCTTC | + |
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Preference number: 1 (lower is better) Translates to: VTFIIESAFMEASWT*LPTVPLSPGLWGCF Trigger: GAAGCAGCCCCAGAGACCAGGGCTCAGAGGAACAGTAGGGAGCCAAGTCCAGCTTGCTTCCATAAAGGCACTTTCAATAATAAAGGTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
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| 3UTR CCA 90 bp | AGTTACGTAACCTTTATTATTGAAAGTGCCTTTATGGAAGCAAGCTaGACTTGGCTCCCTACTGTTCCTCTGAGCCCTGGTCTCTGGGGC | + |
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Preference number: 1 (lower is better) Translates to: SYVTFIIESAFMEAS*TWLPTVPLSPGLWG Trigger: GCCCCAGAGACCAGGGCTCAGAGGAACAGTAGGGAGCCAAGTCCAGCTTGCTTCCATAAAGGCACTTTCAATAATAAAGGTTACGTAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
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| 3UTR-3UTR GCA 90 bp | CCTTTATTATTGAAAGTGCCTTTATGGAAGCAAGCTGGACTTGGCTCCCTACTGCCTGGTCTCTGGGGCTaGTTCCAGCTCTGGATCTTC | + |
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Preference number: 2 (lower is better) Translates to: PLLLKVPLWKQAGLGSLLPGLWG*FQLWIF Trigger: GAAGATCCAGAGCTGGAAGCAGCCCCAGAGACCAGG...CAGTAGGGAGCCAAGTCCAGCTTGCTTCCATAAAGGCACTTTCAATAATAAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
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| 3UTR CCA 72 bp | ATTATTGAAAGTGCCTTTATGGAAGCAAGCTGGACTTaGCTCCCTACTGTTCCTCTGAGCCCTGGTCTCTGG | + |
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Preference number: 3 (lower is better) Translates to: IIESAFMEASWT*LPTVPLSPGLW Trigger: CCAGAGACCAGGGCTCAGAGGAACAGTAGGGAGCCAAGTCCAGCTTGCTTCCATAAAGGCACTTTCAATAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
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| 3UTR CCA 72 bp | ACCTTTATTATTGAAAGTGCCTTTATGGAAGCAAGCTaGACTTGGCTCCCTACTGTTCCTCTGAGCCCTGGT | + |
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Preference number: 3 (lower is better) Translates to: TFIIESAFMEAS*TWLPTVPLSPG Trigger: ACCAGGGCTCAGAGGAACAGTAGGGAGCCAAGTCCAGCTTGCTTCCATAAAGGCACTTTCAATAATAAAGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
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| CDS-3UTR GCA 90 bp | GGAAGCAAGCTGGACTTGGCTCCCTACTGTTCCTCTGAGCCCTGGTCTCTGGGGTGCCGTCCCTGCTGCTaGCCCTGCCGTCCCTGCCGC | + |
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Preference number: 4 (lower is better) Translates to: GSKLDLAPYCSSEPWSLGCRPCC*PCRPCR Trigger: GCGGCAGGGACGGCAGGGGCAGCAGCAGGGACGGCA...CCCCAGAGACCAGGGCTCAGAGGAACAGTAGGGAGCCAAGTCCAGCTTGCTTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
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| CDS-3UTR GCA 90 bp | CTGGACTTGGCTCCCTACTGTTCCTCTGAGCCCTGGTCTCTGGGGCTGCTTCCATGCCCCTGCCGTCCCTaGTGCTGCCCCTGCCGTCCC | + |
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Preference number: 4 (lower is better) Translates to: LDLAPYCSSEPWSLGLLPCPCRP*CCPCRP Trigger: GGGACGGCAGGGGCAGCAGCAGGGACGGCAGGGGCA...TGGAAGCAGCCCCAGAGACCAGGGCTCAGAGGAACAGTAGGGAGCCAAGTCCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
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| CDS-3UTR GCA 90 bp | AGCAAGCTGGACTTGGCTCCCTACTGTTCCTCTGAGCCCTGGTCTCTGGGGCTGTGGCCCTGCCGTCCCTaGTGCTGCCCCTGCCGTCCC | + |
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Preference number: 4 (lower is better) Translates to: SKLDLAPYCSSEPWSLGLWPCRP*CCPCRP Trigger: GGGACGGCAGGGGCAGCAGCAGGGACGGCAGGGCCA...CAGCCCCAGAGACCAGGGCTCAGAGGAACAGTAGGGAGCCAAGTCCAGCTTGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
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| CDS-3UTR GCA 90 bp | AGCAAGCTGGACTTGGCTCCCTACTGTTCCTCTGAGCCCTGGTCTCTGGGGCTGTGCCGTCCCTGCTGCTaGCCCTGCCGTCCCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SKLDLAPYCSSEPWSLGLCRPCC*PCRPCC Trigger: GCAGCAGGGACGGCAGGGGCAGCAGCAGGGACGGCA...CAGCCCCAGAGACCAGGGCTCAGAGGAACAGTAGGGAGCCAAGTCCAGCTTGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
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| CDS-3UTR CCA 90 bp | GGAAGCAAGCTGGACTTGGCTCCCTACTGTTCCTCTGAGCCCTGGTCTCTGGGGTGCCGTCCCTGCTGCTaGCCCTGCCGTCCCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: GSKLDLAPYCSSEPWSLGCRPCC*PCRPCC Trigger: GCAGCAGGGACGGCAGGGCCAGCAGCAGGGACGGCA...CCCCAGAGACCAGGGCTCAGAGGAACAGTAGGGAGCCAAGTCCAGCTTGCTTCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
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| CDS-3UTR GCA 90 bp | CTGGACTTGGCTCCCTACTGTTCCTCTGAGCCCTGGTCTCTGGGGCTGCTTCCAGCCACCTGCTGCCCTTaGTGCCCCTGCTGTCTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: LDLAPYCSSEPWSLGLLPATCCP*CPCCLG Trigger: GCCGAGACAGCAGGGGCAGCAAGGGCAGCAGGTGGC...TGGAAGCAGCCCCAGAGACCAGGGCTCAGAGGAACAGTAGGGAGCCAAGTCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
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| CDS-3UTR CCA 90 bp | AAGCTGGACTTGGCTCCCTACTGTTCCTCTGAGCCCTGGTCTCTGGGGCTGCTTTGCTGGCCCTGCTGCTaGCCCTGCCGTCCCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KLDLAPYCSSEPWSLGLLCWPCC*PCRPCC Trigger: GCAGCAGGGACGGCAGGGCCAGCAGCAGGGCCAGCA...AAGCAGCCCCAGAGACCAGGGCTCAGAGGAACAGTAGGGAGCCAAGTCCAGCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
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| CDS-3UTR GCA 90 bp | TGCCTTTATGGAAGCAAGCTGGACTTGGCTCCCTACTGTTCCTCTGAGCCCTGGTGCCCCTGCCGTCCCTaGTGCTGGCCCTGCCGTCCC | + |
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Preference number: 4 (lower is better) Translates to: CLYGSKLDLAPYCSSEPWCPCRP*CWPCRP Trigger: GGGACGGCAGGGCCAGCAGCAGGGACGGCAGGGGCA...CCAGGGCTCAGAGGAACAGTAGGGAGCCAAGTCCAGCTTGCTTCCATAAAGGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
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| CDS-3UTR GCA 90 bp | TGGACTTGGCTCCCTACTGTTCCTCTGAGCCCTGGTCTCTGGGGCTGCTTCCAGCCCTGCTGTCTCGGCTaGTGTCCCTGCTGTCTCGGC | + |
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Preference number: 4 (lower is better) Translates to: WTWLPTVPLSPGLWGCFQPCCLG*CPCCLG Trigger: GCCGAGACAGCAGGGACAGCAGCCGAGACAGCAGGG...CTGGAAGCAGCCCCAGAGACCAGGGCTCAGAGGAACAGTAGGGAGCCAAGTCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
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| CDS-3UTR GCA 90 bp | CTGGACTTGGCTCCCTACTGTTCCTCTGAGCCCTGGTCTCTGGGGCTGCTTCCATGCCCTTGCTGCCCCTaGTGTCTCGGCTGCTGTCCC | + |
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Preference number: 4 (lower is better) Translates to: LDLAPYCSSEPWSLGLLPCPCCP*CLGCCP Trigger: GGGACAGCAGCCGAGACAGCAGGGGCAGCAAGGGCA...TGGAAGCAGCCCCAGAGACCAGGGCTCAGAGGAACAGTAGGGAGCCAAGTCCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
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| CDS-3UTR GCA 90 bp | AGTGCCTTTATGGAAGCAAGCTGGACTTGGCTCCCTACTGTTCCTCTGAGCCCTCCCTGCCGTCCCTGCTaGTGGCCCTGCTGCTGGCCC | + |
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Preference number: 4 (lower is better) Translates to: SAFMEASWTWLPTVPLSPPCRPC*WPCCWP Trigger: GGGCCAGCAGCAGGGCCAGCAGCAGGGACGGCAGGG...AGGGCTCAGAGGAACAGTAGGGAGCCAAGTCCAGCTTGCTTCCATAAAGGCACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
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| CDS-3UTR GCA 90 bp | AAGCTGGACTTGGCTCCCTACTGTTCCTCTGAGCCCTGGTCTCTGGGGCTGCTTCTCGGCTGCTGTCCCTaGTGTCTCGGCTGCTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: KLDLAPYCSSEPWSLGLLLGCCP*CLGCCP Trigger: GGGACAGCAGCCGAGACAGCAGGGACAGCAGCCGAG...AAGCAGCCCCAGAGACCAGGGCTCAGAGGAACAGTAGGGAGCCAAGTCCAGCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
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| CDS-3UTR CCA 90 bp | CTGGACTTGGCTCCCTACTGTTCCTCTGAGCCCTGGTCTCTGGGGCTGCTTCCACTACTGCTGCAGCCATaGGGCCACCTGCTGCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LDLAPYCSSEPWSLGLLPLLLQP*GHLLPL Trigger: CAAGGGCAGCAGGTGGCCCCATGGCTGCAGCAGTAG...TGGAAGCAGCCCCAGAGACCAGGGCTCAGAGGAACAGTAGGGAGCCAAGTCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
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| CDS-3UTR GCA 90 bp | TGCCTTTATGGAAGCAAGCTGGACTTGGCTCCCTACTGTTCCTCTGAGCCCTGGTGCCGTCCCTGCTGTTaGCCCTGCCGTCCCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: CLYGSKLDLAPYCSSEPWCRPCC*PCRPCC Trigger: GCAGCAGGGACGGCAGGGGCAACAGCAGGGACGGCA...CCAGGGCTCAGAGGAACAGTAGGGAGCCAAGTCCAGCTTGCTTCCATAAAGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
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| CDS-3UTR GCA 90 bp | AGCAAGCTGGACTTGGCTCCCTACTGTTCCTCTGAGCCCTGGTCTCTGGGGCTGTGCCATCCCTGCTGTTaGTCCTGCCGTCCCTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: SKLDLAPYCSSEPWSLGLCHPCC*SCRPCC Trigger: ACAGCAGGGACGGCAGGAGCAACAGCAGGGATGGCA...CAGCCCCAGAGACCAGGGCTCAGAGGAACAGTAGGGAGCCAAGTCCAGCTTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
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| CDS-3UTR TCA 90 bp | AAGCTGGACTTGGCTCCCTACTGTTCCTCTGAGCCCTGGTCTCTGGGGCTGCTTTTCGCTCTGCAAGGTTaGCACGAGGGGAGCTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KLDLAPYCSSEPWSLGLLFALQG*HEGSFR Trigger: CCTGAAGCTCCCCTCGTGTCAACCTTGCAGAGCGAA...AAGCAGCCCCAGAGACCAGGGCTCAGAGGAACAGTAGGGAGCCAAGTCCAGCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
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| CDS-3UTR GCA 90 bp | AAGCTGGACTTGGCTCCCTACTGTTCCTCTGAGCCCTGGTCTCTGGGGCTGCTTGGTCTTGATGCTGCCTaGAAATGCCACGTTCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: KLDLAPYCSSEPWSLGLLGLDAA*KCHVQA Trigger: GGCCTGAACGTGGCATTTGCAGGCAGCATCAAGACC...AAGCAGCCCCAGAGACCAGGGCTCAGAGGAACAGTAGGGAGCCAAGTCCAGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
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| CDS-3UTR CCA 90 bp | AGCAAGCTGGACTTGGCTCCCTACTGTTCCTCTGAGCCCTGGTCTCTGGGGCTGTTGCAGCAAGTGCCATaGCCTTGCTGGATTCACCTC | + |
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Preference number: 4 (lower is better) Translates to: SKLDLAPYCSSEPWSLGLLQQVP*PCWIHL Trigger: GAGGTGAATCCAGCAAGGCCATGGCACTTGCTGCAA...CAGCCCCAGAGACCAGGGCTCAGAGGAACAGTAGGGAGCCAAGTCCAGCTTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
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| CDS-3UTR CCA 90 bp | TGGACTTGGCTCCCTACTGTTCCTCTGAGCCCTGGTCTCTGGGGCTGCTTCCAGTTGTCCTTGGAACTGTaGCGACTCATGCCTGTCCTG | + |
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Preference number: 4 (lower is better) Translates to: WTWLPTVPLSPGLWGCFQLSLEL*RLMPVL Trigger: CAGGACAGGCATGAGTCGCCACAGTTCCAAGGACAA...CTGGAAGCAGCCCCAGAGACCAGGGCTCAGAGGAACAGTAGGGAGCCAAGTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
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| CDS-3UTR CCA 90 bp | AGCAAGCTGGACTTGGCTCCCTACTGTTCCTCTGAGCCCTGGTCTCTGGGGCTGCAAATGCAGCAGAAGTaGCTTCTGACACAGTTGGGG | + |
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Preference number: 4 (lower is better) Translates to: SKLDLAPYCSSEPWSLGLQMQQK*LLTQLG Trigger: CCCCAACTGTGTCAGAAGCCACTTCTGCTGCATTTG...CAGCCCCAGAGACCAGGGCTCAGAGGAACAGTAGGGAGCCAAGTCCAGCTTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
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| CDS-3UTR CCA 90 bp | TGGACTTGGCTCCCTACTGTTCCTCTGAGCCCTGGTCTCTGGGGCTGCTTCCAGGTTTGGGAAACCTTCTaGCTCCCATCCCTTTCACAC | + |
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Preference number: 4 (lower is better) Translates to: WTWLPTVPLSPGLWGCFQVWETF*LPSLSH Trigger: GTGTGAAAGGGATGGGAGCCAGAAGGTTTCCCAAAC...CTGGAAGCAGCCCCAGAGACCAGGGCTCAGAGGAACAGTAGGGAGCCAAGTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
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| CDS-3UTR TCA 90 bp | CTGGACTTGGCTCCCTACTGTTCCTCTGAGCCCTGGTCTCTGGGGCTGCTTCCATTCTTCCTGGTTTTGTaGCCAGTCCTGGACTCACTT | + |
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Preference number: 4 (lower is better) Translates to: LDLAPYCSSEPWSLGLLPFFLVL*PVLDSL Trigger: AAGTGAGTCCAGGACTGGTCACAAAACCAGGAAGAA...TGGAAGCAGCCCCAGAGACCAGGGCTCAGAGGAACAGTAGGGAGCCAAGTCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
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| CDS-3UTR TCA 90 bp | CTTTATGGAAGCAAGCTGGACTTGGCTCCCTACTGTTCCTCTGAGCCCTGGTCTTTCCCATGGAGGTGTTaGACACGCCCATGGATCGGT | + |
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Preference number: 4 (lower is better) Translates to: LYGSKLDLAPYCSSEPWSFPWRC*TRPWIG Trigger: ACCGATCCATGGGCGTGTTCAACACCTCCATGGGAA...AGACCAGGGCTCAGAGGAACAGTAGGGAGCCAAGTCCAGCTTGCTTCCATAAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
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| CDS-3UTR TCA 90 bp | CTTTATGGAAGCAAGCTGGACTTGGCTCCCTACTGTTCCTCTGAGCCCTGGTCTCCCTCCTCTATCACATaGGGTGTCCCCTGCTTTTGG | + |
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Preference number: 4 (lower is better) Translates to: LYGSKLDLAPYCSSEPWSPSSIT*GVPCFW Trigger: CCAAAAGCAGGGGACACCTCATGTGATAGAGGAGGG...AGACCAGGGCTCAGAGGAACAGTAGGGAGCCAAGTCCAGCTTGCTTCCATAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
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| CDS-3UTR GCA 90 bp | CTGGACTTGGCTCCCTACTGTTCCTCTGAGCCCTGGTCTCTGGGGCTGCTTCCATCTCTGAGACAAGTGTaGTTTTGGTGTCAACGCTTG | + |
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Preference number: 4 (lower is better) Translates to: LDLAPYCSSEPWSLGLLPSLRQV*FWCQRL Trigger: CAAGCGTTGACACCAAAAGCACACTTGTCTCAGAGA...TGGAAGCAGCCCCAGAGACCAGGGCTCAGAGGAACAGTAGGGAGCCAAGTCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
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| CDS-3UTR GCA 90 bp | TTTATTATTGAAAGTGCCTTTATGGAAGCAAGCTGGACTTGGCTCCCTACTGTTCCCTGCTGCTGGCCCTaGCGTCCCTGCTGCTGGCCC | + |
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Preference number: 4 (lower is better) Translates to: FIIESAFMEASWTWLPTVPCCWP*RPCCWP Trigger: GGGCCAGCAGCAGGGACGGCAGGGCCAGCAGCAGGG...AACAGTAGGGAGCCAAGTCCAGCTTGCTTCCATAAAGGCACTTTCAATAATAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
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| CDS-3UTR TCA 90 bp | TTGGCTCCCTACTGTTCCTCTGAGCCCTGGTCTCTGGGGCTGCTTCCAGCTCTGCGTGAACAGAGATCTTaGCAAACTTCAAAGGAAGCA | + |
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Preference number: 4 (lower is better) Translates to: LAPYCSSEPWSLGLLPALREQRS*QTSKEA Trigger: TGCTTCCTTTGAAGTTTGTCAAGATCTCTGTTCACG...CAGAGCTGGAAGCAGCCCCAGAGACCAGGGCTCAGAGGAACAGTAGGGAGCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
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| CDS-3UTR GCA 90 bp | CCTTTATTATTGAAAGTGCCTTTATGGAAGCAAGCTGGACTTGGCTCCCTACTGTGCCCCTGCCGTCCCTaGCGCCCTTGCTTTGGCAGA | + |
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Preference number: 4 (lower is better) Translates to: PLLLKVPLWKQAGLGSLLCPCRP*RPCFGR Trigger: TCTGCCAAAGCAAGGGCGGCAGGGACGGCAGGGGCA...CAGTAGGGAGCCAAGTCCAGCTTGCTTCCATAAAGGCACTTTCAATAATAAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
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| CDS-3UTR GCA 90 bp | TGCCTTTATGGAAGCAAGCTGGACTTGGCTCCCTACTGTTCCTCTGAGCCCTGGCCCCTTAATCTGCCATaGCCTTTCCCTTTGTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: CLYGSKLDLAPYCSSEPWPLNLP*PFPLSS Trigger: AGAGGACAAAGGGAAAGGGCATGGCAGATTAAGGGG...CCAGGGCTCAGAGGAACAGTAGGGAGCCAAGTCCAGCTTGCTTCCATAAAGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
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| CDS-3UTR TCA 90 bp | AAGCTGGACTTGGCTCCCTACTGTTCCTCTGAGCCCTGGTCTCTGGGGCTGCTTCTACATTTTCTAAGGTaGTGTTTGCAGCAAGTGCCA | + |
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Preference number: 4 (lower is better) Translates to: KLDLAPYCSSEPWSLGLLLHFLR*CLQQVP Trigger: TGGCACTTGCTGCAAACATCACCTTAGAAAATGTAG...AAGCAGCCCCAGAGACCAGGGCTCAGAGGAACAGTAGGGAGCCAAGTCCAGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
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| CDS-3UTR TCA 90 bp | AGCAAGCTGGACTTGGCTCCCTACTGTTCCTCTGAGCCCTGGTCTCTGGGGCTGATTTGGTTTCAAGGATaGTCTTCTCCATTGTCTCAG | + |
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Preference number: 4 (lower is better) Translates to: SKLDLAPYCSSEPWSLGLIWFQG*SSPLSQ Trigger: CTGAGACAATGGAGAAGATCATCCTTGAAACCAAAT...CAGCCCCAGAGACCAGGGCTCAGAGGAACAGTAGGGAGCCAAGTCCAGCTTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
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| CDS-3UTR GCA 90 bp | GTAACCTTTATTATTGAAAGTGCCTTTATGGAAGCAAGCTGGACTTGGCTCCCTACCTGCTGCCCTTGCTaGCCCTGCTGTCTCGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: VTFIIESAFMEASWTWLPTCCPC*PCCLGC Trigger: GCAGCCGAGACAGCAGGGGCAGCAAGGGCAGCAGGT...AGGGAGCCAAGTCCAGCTTGCTTCCATAAAGGCACTTTCAATAATAAAGGTTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
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| CDS-3UTR CCA 90 bp | AAGTGCCTTTATGGAAGCAAGCTGGACTTGGCTCCCTACTGTTCCTCTGAGCCCTTCACAGACTTTAGCTaGTCGGGCCAGCAACATGAC | + |
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Preference number: 4 (lower is better) Translates to: KCLYGSKLDLAPYCSSEPFTDFS*SGQQHD Trigger: GTCATGTTGCTGGCCCGACCAGCTAAAGTCTGTGAA...GGGCTCAGAGGAACAGTAGGGAGCCAAGTCCAGCTTGCTTCCATAAAGGCACTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
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| CDS-3UTR TCA 90 bp | AGTGCCTTTATGGAAGCAAGCTGGACTTGGCTCCCTACTGTTCCTCTGAGCCCTGATTCACCTCCTACTTaGTCTTTGGCAGCTGATCCT | + |
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Preference number: 4 (lower is better) Translates to: SAFMEASWTWLPTVPLSPDSPPT*SLAADP Trigger: AGGATCAGCTGCCAAAGATCAAGTAGGAGGTGAATC...AGGGCTCAGAGGAACAGTAGGGAGCCAAGTCCAGCTTGCTTCCATAAAGGCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
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| CDS-3UTR GCA 90 bp | TTTATTATTGAAAGTGCCTTTATGGAAGCAAGCTGGACTTGGCTCCCTACTGTTCATGGGGCCACCTGCTaGCCTTGCTGCCCCTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: FIIESAFMEASWTWLPTVHGATC*PCCPCC Trigger: ACAGCAGGGGCAGCAAGGGCAGCAGGTGGCCCCATG...AACAGTAGGGAGCCAAGTCCAGCTTGCTTCCATAAAGGCACTTTCAATAATAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
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| CDS-3UTR CCA 90 bp | GAAAGTGCCTTTATGGAAGCAAGCTGGACTTGGCTCCCTACTGTTCCTCTGAGCGCTTCAGAGCTAGTTTaGGAAACCTTCTGGCTCCCA | + |
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Preference number: 4 (lower is better) Translates to: ESAFMEASWTWLPTVPLSASELV*ETFWLP Trigger: TGGGAGCCAGAAGGTTTCCCAAACTAGCTCTGAAGC...GCTCAGAGGAACAGTAGGGAGCCAAGTCCAGCTTGCTTCCATAAAGGCACTTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
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| CDS-3UTR TCA 90 bp | GAAAGTGCCTTTATGGAAGCAAGCTGGACTTGGCTCCCTACTGTTCCTCTGAGCAAGGAAGCAGCCTGGTaGGCTCTAAAGTCTTTGAAG | + |
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Preference number: 4 (lower is better) Translates to: ESAFMEASWTWLPTVPLSKEAAW*ALKSLK Trigger: CTTCAAAGACTTTAGAGCTCACCAGGCTGCTTCCTT...GCTCAGAGGAACAGTAGGGAGCCAAGTCCAGCTTGCTTCCATAAAGGCACTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
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| CDS-3UTR GCA 90 bp | TGCCTTTATGGAAGCAAGCTGGACTTGGCTCCCTACTGTTCCTCTGAGCCCTGGGTAGCAAACATTCACTaGTCATGGTTCTCTTCATCC | + |
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Preference number: 4 (lower is better) Translates to: CLYGSKLDLAPYCSSEPWVANIH*SWFSSS Trigger: GGATGAAGAGAACCATGAGCAGTGAATGTTTGCTAC...CCAGGGCTCAGAGGAACAGTAGGGAGCCAAGTCCAGCTTGCTTCCATAAAGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
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| CDS-3UTR CCA 90 bp | AGTGCCTTTATGGAAGCAAGCTGGACTTGGCTCCCTACTGTTCCTCTGAGCCCTAACATTCACTGCTCATaGTTCTCTTCATCCCAGGCA | + |
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Preference number: 4 (lower is better) Translates to: SAFMEASWTWLPTVPLSPNIHCS*FSSSQA Trigger: TGCCTGGGATGAAGAGAACCATGAGCAGTGAATGTT...AGGGCTCAGAGGAACAGTAGGGAGCCAAGTCCAGCTTGCTTCCATAAAGGCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
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| CDS-3UTR CCA 90 bp | GAAAGTGCCTTTATGGAAGCAAGCTGGACTTGGCTCCCTACTGTTCCTCTGAGCGATGCAATTGGTCATTaGTGGCCTCAGGAGATAGAC | + |
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Preference number: 4 (lower is better) Translates to: ESAFMEASWTWLPTVPLSDAIGH*WPQEID Trigger: GTCTATCTCCTGAGGCCACCAATGACCAATTGCATC...GCTCAGAGGAACAGTAGGGAGCCAAGTCCAGCTTGCTTCCATAAAGGCACTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
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| CDS-3UTR CCA 90 bp | GAAAGTGCCTTTATGGAAGCAAGCTGGACTTGGCTCCCTACTGTTCCTCTGAGCAGACAAGTGTGCTTTTaGTGTCAACGCTTGTCTCGC | + |
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Preference number: 4 (lower is better) Translates to: ESAFMEASWTWLPTVPLSRQVCF*CQRLSR Trigger: GCGAGACAAGCGTTGACACCAAAAGCACACTTGTCT...GCTCAGAGGAACAGTAGGGAGCCAAGTCCAGCTTGCTTCCATAAAGGCACTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
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| CDS-3UTR GCA 90 bp | ACCTTTATTATTGAAAGTGCCTTTATGGAAGCAAGCTGGACTTGGCTCCCTACTTGCTGTCCCTGCTGTTaGTCCTGCCATCCCTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TFIIESAFMEASWTWLPTCCPCC*SCHPCC Trigger: ACAGCAGGGATGGCAGGAGCAACAGCAGGGACAGCA...AGTAGGGAGCCAAGTCCAGCTTGCTTCCATAAAGGCACTTTCAATAATAAAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
||
| CDS-3UTR GCA 90 bp | CCTTTATTATTGAAAGTGCCTTTATGGAAGCAAGCTGGACTTGGCTCCCTACTGAGGAGCTGTGTCTCTTaGCCCTTAATCTGCCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: PLLLKVPLWKQAGLGSLLRSCVS*PLICHA Trigger: GGCATGGCAGATTAAGGGGCAAGAGACACAGCTCCT...CAGTAGGGAGCCAAGTCCAGCTTGCTTCCATAAAGGCACTTTCAATAATAAAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
||
| CDS-3UTR GCA 90 bp | CCTTTATTATTGAAAGTGCCTTTATGGAAGCAAGCTGGACTTGGCTCCCTACTGGATGTTTGCAGCAAGTaGCATGGCCTTGCTGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: PLLLKVPLWKQAGLGSLLDVCSK*HGLAGF Trigger: GAATCCAGCAAGGCCATGGCACTTGCTGCAAACATC...CAGTAGGGAGCCAAGTCCAGCTTGCTTCCATAAAGGCACTTTCAATAATAAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
||
| CDS-3UTR TCA 90 bp | GTAACCTTTATTATTGAAAGTGCCTTTATGGAAGCAAGCTGGACTTGGCTCCCTCTGGACTCACTTTTGTaGGAGGAGCTGTGTCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: VTFIIESAFMEASWTWLPLDSLL*EELCLL Trigger: CAAGAGACACAGCTCCTCTCACAAAAGTGAGTCCAG...AGGGAGCCAAGTCCAGCTTGCTTCCATAAAGGCACTTTCAATAATAAAGGTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
||
| CDS-3UTR GCA 90 bp | GTAACCTTTATTATTGAAAGTGCCTTTATGGAAGCAAGCTGGACTTGGCTCCCTAAAGAGGTCTTCTCGTaGGTCAGAAGAGGGACACAG | + |
|
Preference number: 4 (lower is better) Translates to: VTFIIESAFMEASWTWLPKEVFS*VRRGTQ Trigger: CTGTGTCCCTCTTCTGACGCACGAGAAGACCTCTTT...AGGGAGCCAAGTCCAGCTTGCTTCCATAAAGGCACTTTCAATAATAAAGGTTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
||
| CDS-3UTR GCA 90 bp | AGTTACGTAACCTTTATTATTGAAAGTGCCTTTATGGAAGCAAGCTGGACTTGGGACTCATGCCTGTCCTaGGGTGGTGGGAACTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SYVTFIIESAFMEASWTWDSCLS*GGGNFS Trigger: GGAAAAGTTCCCACCACCGCAGGACAGGCATGAGTC...CCAAGTCCAGCTTGCTTCCATAAAGGCACTTTCAATAATAAAGGTTACGTAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
||
| CDS-3UTR GCA 90 bp | CCTTTATTATTGAAAGTGCCTTTATGGAAGCAAGCTGGACTTGGCTCCCTACTGTCTTGCCCCTTAATCTaGCATGCCCTTTCCCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PLLLKVPLWKQAGLGSLLSCPLI*HALSLC Trigger: ACAAAGGGAAAGGGCATGGCAGATTAAGGGGCAAGA...CAGTAGGGAGCCAAGTCCAGCTTGCTTCCATAAAGGCACTTTCAATAATAAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
||
| CDS-3UTR CCA 90 bp | CCTTTATTATTGAAAGTGCCTTTATGGAAGCAAGCTGGACTTGGCTCCCTACTGGCAATTGGTCATTGGTaGCCTCAGGAGATAGACAAG | + |
|
Preference number: 4 (lower is better) Translates to: PLLLKVPLWKQAGLGSLLAIGHW*PQEIDK Trigger: CTTGTCTATCTCCTGAGGCCACCAATGACCAATTGC...CAGTAGGGAGCCAAGTCCAGCTTGCTTCCATAAAGGCACTTTCAATAATAAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
||
| CDS-3UTR TCA 90 bp | AGTTACGTAACCTTTATTATTGAAAGTGCCTTTATGGAAGCAAGCTGGACTTGGTTCTCCACGGATCTCTaGGACAAGTGTGCTTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SYVTFIIESAFMEASWTWFSTDL*DKCAFG Trigger: ACCAAAAGCACACTTGTCTCAGAGATCCGTGGAGAA...CCAAGTCCAGCTTGCTTCCATAAAGGCACTTTCAATAATAAAGGTTACGTAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
||
| CDS-3UTR GCA 90 bp | GTAACCTTTATTATTGAAAGTGCCTTTATGGAAGCAAGCTGGACTTGGCTCCCTCTCTCTCTTTTCCTTTaGTTCAGAGCTAGTTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: VTFIIESAFMEASWTWLPLSLFL*FRASLG Trigger: TCCCAAACTAGCTCTGAAGCAAAGGAAAAGAGAGAG...AGGGAGCCAAGTCCAGCTTGCTTCCATAAAGGCACTTTCAATAATAAAGGTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
||
| CDS-3UTR GCA 90 bp | TTTATTATTGAAAGTGCCTTTATGGAAGCAAGCTGGACTTGGCTCCCTACTGTTGGTGGGAACTTTTCCTaGTACTCGTTCTGTCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: FIIESAFMEASWTWLPTVGGNFS*YSFCPF Trigger: AAAAGGACAGAACGAGTAGCAGGAAAAGTTCCCACC...AACAGTAGGGAGCCAAGTCCAGCTTGCTTCCATAAAGGCACTTTCAATAATAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
||
| CDS-3UTR TCA 90 bp | AGTTACGTAACCTTTATTATTGAAAGTGCCTTTATGGAAGCAAGCTGGACTTGGACATTGGTGCATACTTaGAAATATCATACTCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SYVTFIIESAFMEASWTWTLVHT*KYHTLL Trigger: GAGGAGAGTATGATATTTTCAAGTATGCACCAATGT...CCAAGTCCAGCTTGCTTCCATAAAGGCACTTTCAATAATAAAGGTTACGTAACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
||
| CDS GCA 90 bp | TGCCCCTGCCGTCCCTGCTGCTGCCCCTGCCGTCCCTGCCGCCCTTaGTTTGGCAGATACTGGAGTAACAGCAGCTGCAGCAGCCGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: CPCRPCCCPCRPCRP*FGRYWSNSSCSSRL Trigger: CAACCGGCTGCTGCAGCTGCTGTTACTCCAGTATCTGCCAAAGCAAGGGCGGCAGGGACGGCAGGGGCAGCAGCAGGGACGGCAGGGGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
||
| CDS GCA 90 bp | CCTTGCTGCCCCTGCTGTCTCGGCTGCTGTCCCTGCTGTCTCGGCTaGTGTCCCTGCTGTTGCTCCTGCCATCCCTGCTGTTGCTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PCCPCCLGCCPCCLG*CPCCCSCHPCCCSC Trigger: GCAGGAGCAACAGCAGGGATGGCAGGAGCAACAGCAGGGACAGCAGCCGAGACAGCAGGGACAGCAGCCGAGACAGCAGGGGCAGCAAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
||
| CDS-3UTR CAA 90 bp | GGAAGCAAGCTGGACTTGGCTCCCTACTGTTCCTCTGAGCCCTGGTCTCTGGGGCTGCTGTCCCTGCTGTaGCTCCTGCCATCCCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GSKLDLAPYCSSEPWSLGLLSLL*LLPSLL Trigger: CAGCAGGGATGGCAGGAGCAACAGCAGGGACAGCAG...CCCCAGAGACCAGGGCTCAGAGGAACAGTAGGGAGCCAAGTCCAGCTTGCTTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
||
| CDS CCA 90 bp | CTTGGTCTTGATGCTGCCTGCAAATGCCACGTTCAGGCCGGTGTCTaGGGAGCCACTAGCATCACCCCCTGCAGGAGGGGACTCCGAAAT | + |
|
Preference number: 5 (lower is better) Translates to: LGLDAACKCHVQAGV*GATSITPCRRGLRN Trigger: ATTTCGGAGTCCCCTCCTGCAGGGGGTGATGCTAGTGGCTCCCCAGACACCGGCCTGAACGTGGCATTTGCAGGCAGCATCAAGACCAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
||
| CDS-3UTR CAA 90 bp | GGAAGCAAGCTGGACTTGGCTCCCTACTGTTCCTCTGAGCCCTGGTCTCTGGGGCTTCGCTCTGCAAGGTaGACACGAGGGGAGCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: GSKLDLAPYCSSEPWSLGLRSAR*TRGELQ Trigger: CTGAAGCTCCCCTCGTGTCAACCTTGCAGAGCGAAG...CCCCAGAGACCAGGGCTCAGAGGAACAGTAGGGAGCCAAGTCCAGCTTGCTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
||
| CDS-3UTR CAA 90 bp | AGTGCCTTTATGGAAGCAAGCTGGACTTGGCTCCCTACTGTTCCTCTGAGCCCTCTGCCATCCCTGCTGTaGCTCCTGCCGTCCCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SAFMEASWTWLPTVPLSPLPSLL*LLPSLL Trigger: CAGCAGGGACGGCAGGAGCAACAGCAGGGATGGCAG...AGGGCTCAGAGGAACAGTAGGGAGCCAAGTCCAGCTTGCTTCCATAAAGGCACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
||
| CDS-3UTR CAA 90 bp | TGGACTTGGCTCCCTACTGTTCCTCTGAGCCCTGGTCTCTGGGGCTGCTTCCAGGACTCCGAAATAGAATaGGCAGCTCCTGCCAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: WTWLPTVPLSPGLWGCFQDSEIE*AAPAKA Trigger: GGCCTTGGCAGGAGCTGCCAATTCTATTTCGGAGTC...CTGGAAGCAGCCCCAGAGACCAGGGCTCAGAGGAACAGTAGGGAGCCAAGTCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
||
| CDS TCA 90 bp | ACACGAGGGGAGCTTCAGGTTTATCTTCAGCAGGCGACTTGGTCTTaGTGCTGCCTGCAAATGCCACGTTCAGGCCGGTGTCTGGGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: TRGELQVYLQQATWS*CCLQMPRSGRCLGS Trigger: GCTCCCCAGACACCGGCCTGAACGTGGCATTTGCAGGCAGCATCAAGACCAAGTCGCCTGCTGAAGATAAACCTGAAGCTCCCCTCGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
||
| CDS-3UTR CAA 90 bp | GGAAGCAAGCTGGACTTGGCTCCCTACTGTTCCTCTGAGCCCTGGTCTCTGGGGCCATGCCCTTTCCCTTaGTCCTCTCTCGTTTTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: GSKLDLAPYCSSEPWSLGPCPFP*SSLVFP Trigger: TGGGAAAACGAGAGAGGACAAAGGGAAAGGGCATGG...CCCCAGAGACCAGGGCTCAGAGGAACAGTAGGGAGCCAAGTCCAGCTTGCTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
||
| CDS CCA 90 bp | CTTGATGAATCGGGCTCGTCTGGCATGTTCTTCACAGACTTTAGCTaGTCGGGCCAGCAACATGACATCGGGCAGTGGAAGGACCGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LDESGSSGMFFTDFS*SGQQHDIGQWKDRA Trigger: AGCCCGGTCCTTCCACTGCCCGATGTCATGTTGCTGGCCCGACCAGCTAAAGTCTGTGAAGAACATGCCAGACGAGCCCGATTCATCAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
||
| CDS CCA 90 bp | CAGCAAGTGCCATGGCCTTGCTGGATTCACCTCCTACTTGATCTTTaGCAGCTGATCCTATCATGGCTGCGGCTACCTGGCCTGAACCTG | + |
|
Preference number: 5 (lower is better) Translates to: QQVPWPCWIHLLLDL*QLILSWLRLPGLNL Trigger: CAGGTTCAGGCCAGGTAGCCGCAGCCATGATAGGATCAGCTGCCAAAGATCAAGTAGGAGGTGAATCCAGCAAGGCCATGGCACTTGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
||
| CDS-3UTR CAA 90 bp | TGCCTTTATGGAAGCAAGCTGGACTTGGCTCCCTACTGTTCCTCTGAGCCCTGGGAGGAGCTGTGTCTCTaGCCCCTTAATCTGCCATGC | + |
|
Preference number: 5 (lower is better) Translates to: CLYGSKLDLAPYCSSEPWEELCL*PLNLPC Trigger: GCATGGCAGATTAAGGGGCAAGAGACACAGCTCCTC...CCAGGGCTCAGAGGAACAGTAGGGAGCCAAGTCCAGCTTGCTTCCATAAAGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
||
| CDS TCA 90 bp | CTGGCTCCCATCCCTTTCACACATGTAGCCTTCGCTCTGCAAGGTTaGCACGAGGGGAGCTTCAGGTTTATCTTCAGCAGGCGACTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: LAPIPFTHVAFALQG*HEGSFRFIFSRRLG Trigger: ACCAAGTCGCCTGCTGAAGATAAACCTGAAGCTCCCCTCGTGTCAACCTTGCAGAGCGAAGGCTACATGTGTGAAAGGGATGGGAGCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
||
| CDS CCA 90 bp | TCCCAGATACAGACCGGTAGGAAGATGTTTTCCGGCTCTTGTCCTTaGAACTGTGGCGACTCATGCCTGTCCTGCGGTGGTGGGAACTTT | + |
|
Preference number: 5 (lower is better) Translates to: SQIQTGRKMFSGSCP*NCGDSCLSCGGGNF Trigger: AAAGTTCCCACCACCGCAGGACAGGCATGAGTCGCCACAGTTCCAAGGACAAGAGCCGGAAAACATCTTCCTACCGGTCTGTATCTGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
||
| CDS TCA 90 bp | ATGTTTGCAGCAAGTGCCATGGCCTTGCTGGATTCACCTCCTACTTaGTCTTTGGCAGCTGATCCTATCATGGCTGCGGCTACCTGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: MFAASAMALLDSPPT*SLAADPIMAAATWP Trigger: AGGCCAGGTAGCCGCAGCCATGATAGGATCAGCTGCCAAAGATCAAGTAGGAGGTGAATCCAGCAAGGCCATGGCACTTGCTGCAAACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
||
| CDS CCA 90 bp | TGCTGGATTCACCTCCTACTTGATCTTTGGCAGCTGATCCTATCATaGCTGCGGCTACCTGGCCTGAACCTGGAGGCTTGGTTGTTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: CWIHLLLDLWQLILS*LRLPGLNLEAWLLL Trigger: CAACAACAACCAAGCCTCCAGGTTCAGGCCAGGTAGCCGCAGCCATGATAGGATCAGCTGCCAAAGATCAAGTAGGAGGTGAATCCAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
||
| CDS-3UTR CAA 90 bp | CCTTTATTATTGAAAGTGCCTTTATGGAAGCAAGCTGGACTTGGCTCCCTACTGAGCTGCAGCAGCCGGTaGTGTCCTCTCTCCTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PLLLKVPLWKQAGLGSLLSCSSR*CPLSSC Trigger: GCAGGAGGAGAGAGGACACAACCGGCTGCTGCAGCT...CAGTAGGGAGCCAAGTCCAGCTTGCTTCCATAAAGGCACTTTCAATAATAAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
||
| CDS GCA 90 bp | TGTGACCAGTCCTGGACTCACTTTTGTGAGAGGAGCTGTGTCTCTTaGCCCTTAATCTGCCATGCCCTTTCCCTTTGTCCTCTCTCGTTT | + |
|
Preference number: 5 (lower is better) Translates to: CDQSWTHFCERSCVS*PLICHALSLCPLSF Trigger: AAACGAGAGAGGACAAAGGGAAAGGGCATGGCAGATTAAGGGGCAAGAGACACAGCTCCTCTCACAAAAGTGAGTCCAGGACTGGTCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
||
| CDS TCA 90 bp | AAGTGTGCTTTTGGTGTCAACGCTTGTCTCGCCAGTGGGAAGCGTTaGGTTACTGATGCAATTGGTCATTGGTGGCCTCAGGAGATAGAC | + |
|
Preference number: 5 (lower is better) Translates to: KCAFGVNACLASGKR*VTDAIGHWWPQEID Trigger: GTCTATCTCCTGAGGCCACCAATGACCAATTGCATCAGTAACTCAACGCTTCCCACTGGCGAGACAAGCGTTGACACCAAAAGCACACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
||
| CDS-3UTR CAA 90 bp | CTTTATGGAAGCAAGCTGGACTTGGCTCCCTACTGTTCCTCTGAGCCCTGGTCTTCTTCTCTACCAACTTaGTCACAATGTCTACCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LYGSKLDLAPYCSSEPWSSSLPT*SQCLPL Trigger: GAGGGGTAGACATTGTGACAAAGTTGGTAGAGAAGA...AGACCAGGGCTCAGAGGAACAGTAGGGAGCCAAGTCCAGCTTGCTTCCATAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
||
| CDS-3UTR CAA 90 bp | CCTTTATTATTGAAAGTGCCTTTATGGAAGCAAGCTGGACTTGGCTCCCTACTGCCTGCCGCCCTTGCTTaGGCAGATACTGGAGTAACA | + |
|
Preference number: 5 (lower is better) Translates to: PLLLKVPLWKQAGLGSLLPAALA*ADTGVT Trigger: TGTTACTCCAGTATCTGCCAAAGCAAGGGCGGCAGG...CAGTAGGGAGCCAAGTCCAGCTTGCTTCCATAAAGGCACTTTCAATAATAAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
||
| CDS TCA 90 bp | TTTTGGTGTCAACGCTTGTCTCGCCAGTGGGAAGCGTTGAGTTACTaGTGCAATTGGTCATTGGTGGCCTCAGGAGATAGACAAGCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: FWCQRLSRQWEALSY*CNWSLVASGDRQAF Trigger: AAAAGCTTGTCTATCTCCTGAGGCCACCAATGACCAATTGCATCAGTAACTCAACGCTTCCCACTGGCGAGACAAGCGTTGACACCAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
||
| CDS-3UTR CAA 90 bp | ACCTTTATTATTGAAAGTGCCTTTATGGAAGCAAGCTGGACTTGGCTCCCTACTTTTCCCATGGAGGTGTaGAACACGCCCATGGATCGG | + |
|
Preference number: 5 (lower is better) Translates to: TFIIESAFMEASWTWLPTFPMEV*NTPMDR Trigger: CCGATCCATGGGCGTGTTCAACACCTCCATGGGAAA...AGTAGGGAGCCAAGTCCAGCTTGCTTCCATAAAGGCACTTTCAATAATAAAGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
||
| CDS-3UTR CAA 90 bp | ACCTTTATTATTGAAAGTGCCTTTATGGAAGCAAGCTGGACTTGGCTCCCTACTGATGTTTTCCGGCTCTaGTCCTTGGAACTGTGGCGA | + |
|
Preference number: 5 (lower is better) Translates to: TFIIESAFMEASWTWLPTDVFRL*SLELWR Trigger: TCGCCACAGTTCCAAGGACAAGAGCCGGAAAACATC...AGTAGGGAGCCAAGTCCAGCTTGCTTCCATAAAGGCACTTTCAATAATAAAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
||
| CDS-3UTR CAA 90 bp | ACCTTTATTATTGAAAGTGCCTTTATGGAAGCAAGCTGGACTTGGCTCCCTACTGAGTTACTGATGCAATaGGTCATTGGTGGCCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: TFIIESAFMEASWTWLPTELLMQ*VIGGLR Trigger: CCTGAGGCCACCAATGACCAATTGCATCAGTAACTC...AGTAGGGAGCCAAGTCCAGCTTGCTTCCATAAAGGCACTTTCAATAATAAAGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
||
| CDS-3UTR CAA 90 bp | ACCTTTATTATTGAAAGTGCCTTTATGGAAGCAAGCTGGACTTGGCTCCCTACTAAAGTCTTTGAAGGCTaGCAACCTTTCCCCTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: TFIIESAFMEASWTWLPTKVFEG*QPFPLM Trigger: CATCAAGGGGAAAGGTTGCAAGCCTTCAAAGACTTT...AGTAGGGAGCCAAGTCCAGCTTGCTTCCATAAAGGCACTTTCAATAATAAAGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
||
| CDS GCA 72 bp | CCCTGCTGTCTCGGCTGCTGTCCCTGCTGTTGCTCCTaGCATCCCTGCTGTTGCTCCTGCCGTCCCTGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: PCCLGCCPCCCS*HPCCCSCRPCC Trigger: ACAGCAGGGACGGCAGGAGCAACAGCAGGGATGGCAGGAGCAACAGCAGGGACAGCAGCCGAGACAGCAGGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
||
| CDS CCA 72 bp | GATGCTGCCTGCAAATGCCACGTTCAGGCCGGTGTCTaGGGAGCCACTAGCATCACCCCCTGCAGGAGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: DAACKCHVQAGV*GATSITPCRRG Trigger: TCCCCTCCTGCAGGGGGTGATGCTAGTGGCTCCCCAGACACCGGCCTGAACGTGGCATTTGCAGGCAGCATC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
||
| CDS CCA 72 bp | CCCTGCCGTCCCTGCCGCCCTTGCTTTGGCAGATACTaGAGTAACAGCAGCTGCAGCAGCCGGTTGTGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: PCRPCRPCFGRY*SNSSCSSRLCP Trigger: AGGACACAACCGGCTGCTGCAGCTGCTGTTACTCCAGTATCTGCCAAAGCAAGGGCGGCAGGGACGGCAGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
||
| CDS GCA 72 bp | CATGACATCGGGCAGTGGAAGGACCGGGCTGGTAGATaGGATGCACACAGTCACCATTCGGACGCGGTTGTG | + |
|
Preference number: 6 (lower is better) Translates to: HDIGQWKDRAGR*DAHSHHSDAVV Trigger: CACAACCGCGTCCGAATGGTGACTGTGTGCATCGCATCTACCAGCCCGGTCCTTCCACTGCCCGATGTCATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
||
| CDS CCA 72 bp | TTTAGCTGGTCGGGCCAGCAACATGACATCGGGCAGTaGAAGGACCGGGCTGGTAGATGCGATGCACACAGT | + |
|
Preference number: 6 (lower is better) Translates to: FSWSGQQHDIGQ*KDRAGRCDAHS Trigger: ACTGTGTGCATCGCATCTACCAGCCCGGTCCTTCCACTGCCCGATGTCATGTTGCTGGCCCGACCAGCTAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
||
| CDS CCA 72 bp | TCGGGCTCGTCTGGCATGTTCTTCACAGACTTTAGCTaGTCGGGCCAGCAACATGACATCGGGCAGTGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: SGSSGMFFTDFS*SGQQHDIGQWK Trigger: CTTCCACTGCCCGATGTCATGTTGCTGGCCCGACCAGCTAAAGTCTGTGAAGAACATGCCAGACGAGCCCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
||
| CDS CCA 72 bp | CAGACCGGTAGGAAGATGTTTTCCGGCTCTTGTCCTTaGAACTGTGGCGACTCATGCCTGTCCTGCGGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: QTGRKMFSGSCP*NCGDSCLSCGG Trigger: ACCACCGCAGGACAGGCATGAGTCGCCACAGTTCCAAGGACAAGAGCCGGAAAACATCTTCCTACCGGTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
||
| CDS CCA 72 bp | CCCCTTCTCCACGGATCTCTGAGACAAGTGTGCTTTTaGTGTCAACGCTTGTCTCGCCAGTGGGAAGCGTTG | + |
|
Preference number: 6 (lower is better) Translates to: PLLHGSLRQVCF*CQRLSRQWEAL Trigger: CAACGCTTCCCACTGGCGAGACAAGCGTTGACACCAAAAGCACACTTGTCTCAGAGATCCGTGGAGAAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
||
| CDS CCA 72 bp | CCATGGCCTTGCTGGATTCACCTCCTACTTGATCTTTaGCAGCTGATCCTATCATGGCTGCGGCTACCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: PWPCWIHLLLDL*QLILSWLRLPG Trigger: GCCAGGTAGCCGCAGCCATGATAGGATCAGCTGCCAAAGATCAAGTAGGAGGTGAATCCAGCAAGGCCATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
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| CDS CAA 72 bp | GGCAGATACTGGAGTAACAGCAGCTGCAGCAGCCGGTaGTGTCCTCTCTCCTCCTGCAAATGCAGCAGAAGT | + |
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Preference number: 6 (lower is better) Translates to: GRYWSNSSCSSR*CPLSSCKCSRS Trigger: ACTTCTGCTGCATTTGCAGGAGGAGAGAGGACACAACCGGCTGCTGCAGCTGCTGTTACTCCAGTATCTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
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| CDS CAA 90 bp | TCTGGCTCCCATCCCTTTCACACATGTAGCCTTCGCTCTGCAAGGTaGACACGAGGGGAGCTTCAGGTTTATCTTCAGCAGGCGACTTGG | + |
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Preference number: 6 (lower is better) Translates to: SGSHPFHTCSLRSAR*TRGELQVYLQQATW Trigger: CCAAGTCGCCTGCTGAAGATAAACCTGAAGCTCCCCTCGTGTCAACCTTGCAGAGCGAAGGCTACATGTGTGAAAGGGATGGGAGCCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
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| CDS TCA 72 bp | GCAAGTGCCATGGCCTTGCTGGATTCACCTCCTACTTaGTCTTTGGCAGCTGATCCTATCATGGCTGCGGCT | + |
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Preference number: 6 (lower is better) Translates to: ASAMALLDSPPT*SLAADPIMAAA Trigger: AGCCGCAGCCATGATAGGATCAGCTGCCAAAGATCAAGTAGGAGGTGAATCCAGCAAGGCCATGGCACTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
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| CDS TCA 72 bp | AGTAGCTCTCTTACTCACAGACCCCAAGCCAGCTGGTaGTCGGTTCTTCCTGGTTTTGTGACCAGTCCTGGA | + |
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Preference number: 6 (lower is better) Translates to: SSSLTHRPQASW*SVLPGFVTSPG Trigger: TCCAGGACTGGTCACAAAACCAGGAAGAACCGATCACCAGCTGGCTTGGGGTCTGTGAGTAAGAGAGCTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
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| CDS TCA 72 bp | CAACGCTTGTCTCGCCAGTGGGAAGCGTTGAGTTACTaGTGCAATTGGTCATTGGTGGCCTCAGGAGATAGA | + |
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Preference number: 6 (lower is better) Translates to: QRLSRQWEALSY*CNWSLVASGDR Trigger: TCTATCTCCTGAGGCCACCAATGACCAATTGCATCAGTAACTCAACGCTTCCCACTGGCGAGACAAGCGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
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| CDS TCA 72 bp | ATCCCTTTCACACATGTAGCCTTCGCTCTGCAAGGTTaGCACGAGGGGAGCTTCAGGTTTATCTTCAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: IPFTHVAFALQG*HEGSFRFIFSR Trigger: CCTGCTGAAGATAAACCTGAAGCTCCCCTCGTGTCAACCTTGCAGAGCGAAGGCTACATGTGTGAAAGGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
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| CDS GCA 72 bp | TCCTGGACTCACTTTTGTGAGAGGAGCTGTGTCTCTTaGCCCTTAATCTGCCATGCCCTTTCCCTTTGTCCT | + |
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Preference number: 6 (lower is better) Translates to: SWTHFCERSCVS*PLICHALSLCP Trigger: AGGACAAAGGGAAAGGGCATGGCAGATTAAGGGGCAAGAGACACAGCTCCTCTCACAAAAGTGAGTCCAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
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| CDS CCA 72 bp | CTGGTGATCGGTTCTTCCTGGTTTTGTGACCAGTCCTaGACTCACTTTTGTGAGAGGAGCTGTGTCTCTTGC | + |
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Preference number: 6 (lower is better) Translates to: LVIGSSWFCDQS*THFCERSCVSC Trigger: GCAAGAGACACAGCTCCTCTCACAAAAGTGAGTCCAGGACTGGTCACAAAACCAGGAAGAACCGATCACCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
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| CDS CAA 72 bp | CATCCCTTTCACACATGTAGCCTTCGCTCTGCAAGGTaGACACGAGGGGAGCTTCAGGTTTATCTTCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: HPFHTCSLRSAR*TRGELQVYLQQ Trigger: CTGCTGAAGATAAACCTGAAGCTCCCCTCGTGTCAACCTTGCAGAGCGAAGGCTACATGTGTGAAAGGGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
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| CDS TCA 72 bp | AGGCCTAGAATTCTGATCCCCTTCTCCACGGATCTCTaGGACAAGTGTGCTTTTGGTGTCAACGCTTGTCTC | + |
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Preference number: 6 (lower is better) Translates to: RPRILIPFSTDL*DKCAFGVNACL Trigger: GAGACAAGCGTTGACACCAAAAGCACACTTGTCTCAGAGATCCGTGGAGAAGGGGATCAGAATTCTAGGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
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| CDS CCA 72 bp | CGTCGCTCTCTCTTTTCCTTTGCTTCAGAGCTAGTTTaGGAAACCTTCTGGCTCCCATCCCTTTCACACATG | + |
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Preference number: 6 (lower is better) Translates to: RRSLFSFASELV*ETFWLPSLSHM Trigger: CATGTGTGAAAGGGATGGGAGCCAGAAGGTTTCCCAAACTAGCTCTGAAGCAAAGGAAAAGAGAGAGCGACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
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| CDS CAA 90 bp | AGCCTGGTGAGCTCTAAAGTCTTTGAAGGCTTGCAACCTTTCCCCTaGATGAATCGGGCTCGTCTGGCATGTTCTTCACAGACTTTAGCT | + |
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Preference number: 6 (lower is better) Translates to: SLVSSKVFEGLQPFP*MNRARLACSSQTLA Trigger: AGCTAAAGTCTGTGAAGAACATGCCAGACGAGCCCGATTCATCAAGGGGAAAGGTTGCAAGCCTTCAAAGACTTTAGAGCTCACCAGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
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| CDS CAA 72 bp | TCGTCGCTCTCTCTTTTCCTTTGCTTCAGAGCTAGTTaGGGAAACCTTCTGGCTCCCATCCCTTTCACACAT | + |
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Preference number: 6 (lower is better) Translates to: SSLSLFLCFRAS*GNLLAPIPFTH Trigger: ATGTGTGAAAGGGATGGGAGCCAGAAGGTTTCCCAAACTAGCTCTGAAGCAAAGGAAAAGAGAGAGCGACGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
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| CDS CAA 72 bp | TCACGGCCTCTATGTCCTGCTTCTTCTCTACCAACTTaGTCACAATGTCTACCCCTCCTCTATCACATGAGG | + |
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Preference number: 6 (lower is better) Translates to: SRPLCPASSLPT*SQCLPLLYHMR Trigger: CCTCATGTGATAGAGGAGGGGTAGACATTGTGACAAAGTTGGTAGAGAAGAAGCAGGACATAGAGGCCGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
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| CDS CAA 90 bp | GTTTCAAGGATGATCTTCTCCATTGTCTCAGAGATTACGGTATCTTaGAACTCTGAATCCTTGCTTTTCTCCATCACGGCCTCTATGTCC | + |
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Preference number: 6 (lower is better) Translates to: VSRMIFSIVSEITVS*NSESLLFSITASMS Trigger: GGACATAGAGGCCGTGATGGAGAAAAGCAAGGATTCAGAGTTCAAAGATACCGTAATCTCTGAGACAATGGAGAAGATCATCCTTGAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
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| CDS CAA 72 bp | ATGATCTTCTCCATTGTCTCAGAGATTACGGTATCTTaGAACTCTGAATCCTTGCTTTTCTCCATCACGGCC | + |
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Preference number: 6 (lower is better) Translates to: MIFSIVSEITVS*NSESLLFSITA Trigger: GGCCGTGATGGAGAAAAGCAAGGATTCAGAGTTCAAAGATACCGTAATCTCTGAGACAATGGAGAAGATCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063166.6 |
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