Pregenerated sensors for FAM71A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000091017Ensembl transcript IDs: ENSMUST00000171798.2
Found 109 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | CTTTATTTAAACTGCACTGAGAAAACTGGAGTGGATTCCAGGGATTaGCCCTGGGCCCTGGGTCCCTTTGCAGTTTTTGGCTCTGAGTTA | + |
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Preference number: 2 (lower is better) Translates to: LYLNCTEKTGVDSRD*PWALGPFAVFGSEL Trigger: TAACTCAGAGCCAAAAACTGCAAAGGGACCCAGGGCCCAGGGCAAATCCCTGGAATCCACTCCAGTTTTCTCAGTGCAGTTTAAATAAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| 3UTR GCA 72 bp | ACTGCACTGAGAAAACTGGAGTGGATTCCAGGGATTTaGCCTGGGCCCTGGGTCCCTTTGCAGTTTTTGGCT | + |
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Preference number: 3 (lower is better) Translates to: TALRKLEWIPGI*PGPWVPLQFLA Trigger: AGCCAAAAACTGCAAAGGGACCCAGGGCCCAGGGCAAATCCCTGGAATCCACTCCAGTTTTCTCAGTGCAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS-3UTR TCA 90 bp | AGGGATTTGCCCTGGGCCCTGGGTCCCTTTGCAGTTTTTGGCTCTGAGTTATACGTCGGGCCAGCAGCATaGCATCAGGGAGTGGAAGGA | + |
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Preference number: 4 (lower is better) Translates to: RDLPWALGPFAVFGSELYVGPAA*HQGVEG Trigger: TCCTTCCACTCCCTGATGTCATGCTGCTGGCCCGAC...GTATAACTCAGAGCCAAAAACTGCAAAGGGACCCAGGGCCCAGGGCAAATCCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS-3UTR CCA 90 bp | ATTCCAGGGATTTGCCCTGGGCCCTGGGTCCCTTTGCAGTTTTTGGCTCTGAGTCAGGGAGTGGAAGGATaGGACTGGTGCACGCAATGC | + |
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Preference number: 4 (lower is better) Translates to: IPGICPGPWVPLQFLALSQGVEG*DWCTQC Trigger: GCATTGCGTGCACCAGTCCCATCCTTCCACTCCCTG...ACTCAGAGCCAAAAACTGCAAAGGGACCCAGGGCCCAGGGCAAATCCCTGGAAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS-3UTR CCA 90 bp | AGAAAACTGGAGTGGATTCCAGGGATTTGCCCTGGGCCCTGGGTCCCTTTGCAGGTGCTGTTGGTGGACTaGCCATGTCCCAGAAGCTCA | + |
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Preference number: 4 (lower is better) Translates to: RKLEWIPGICPGPWVPLQVLLVD*PCPRSS Trigger: TGAGCTTCTGGGACATGGCCAGTCCACCAACAGCAC...CTGCAAAGGGACCCAGGGCCCAGGGCAAATCCCTGGAATCCACTCCAGTTTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS-3UTR CCA 90 bp | TGGAGTGGATTCCAGGGATTTGCCCTGGGCCCTGGGTCCCTTTGCAGTTTTTGGTGCCTTTGGTGCTGTTaGTGGACTGGCCATGTCCCA | + |
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Preference number: 4 (lower is better) Translates to: WSGFQGFALGPGSLCSFWCLWCC*WTGHVP Trigger: TGGGACATGGCCAGTCCACCAACAGCACCAAAGGCA...CCAAAAACTGCAAAGGGACCCAGGGCCCAGGGCAAATCCCTGGAATCCACTCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS-3UTR CCA 90 bp | GATTCCAGGGATTTGCCCTGGGCCCTGGGTCCCTTTGCAGTTTTTGGCTCTGAGATGATTTCCAGGCCCTaGCCATCCTCTGCCTCCATG | + |
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Preference number: 4 (lower is better) Translates to: DSRDLPWALGPFAVFGSEMISRP*PSSASM Trigger: CATGGAGGCAGAGGATGGCCAGGGCCTGGAAATCAT...CTCAGAGCCAAAAACTGCAAAGGGACCCAGGGCCCAGGGCAAATCCCTGGAATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS-3UTR TCA 90 bp | AGAAAACTGGAGTGGATTCCAGGGATTTGCCCTGGGCCCTGGGTCCCTTTGCAGTCTGGCAAGGACTTTTaGGCTTACTTTGGGCGTGGG | + |
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Preference number: 4 (lower is better) Translates to: RKLEWIPGICPGPWVPLQSGKDF*AYFGRG Trigger: CCCACGCCCAAAGTAAGCTCAAAAGTCCTTGCCAGA...CTGCAAAGGGACCCAGGGCCCAGGGCAAATCCCTGGAATCCACTCCAGTTTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS-3UTR TCA 90 bp | AGAAAACTGGAGTGGATTCCAGGGATTTGCCCTGGGCCCTGGGTCCCTTTGCAGCAGCCAAGCTGGCTCTaGTGTTTCTCAGGAACAAGC | + |
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Preference number: 4 (lower is better) Translates to: RKLEWIPGICPGPWVPLQQPSWL*CFSGTS Trigger: GCTTGTTCCTGAGAAACATCAGAGCCAGCTTGGCTG...CTGCAAAGGGACCCAGGGCCCAGGGCAAATCCCTGGAATCCACTCCAGTTTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS-3UTR GCA 90 bp | AGAAAACTGGAGTGGATTCCAGGGATTTGCCCTGGGCCCTGGGTCCCTTTGCAGCTCCAAGGACTTGCTTaGCATCCCTGCCAAGGCAAT | + |
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Preference number: 4 (lower is better) Translates to: RKLEWIPGICPGPWVPLQLQGLA*HPCQGN Trigger: ATTGCCTTGGCAGGGATGGCAAGCAAGTCCTTGGAG...CTGCAAAGGGACCCAGGGCCCAGGGCAAATCCCTGGAATCCACTCCAGTTTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS-3UTR GCA 90 bp | TGGAGTGGATTCCAGGGATTTGCCCTGGGCCCTGGGTCCCTTTGCAGTTTTTGGGCTGCTCACTCCTGCTaGCAACTCTTTCCTTTGCTC | + |
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Preference number: 4 (lower is better) Translates to: WSGFQGFALGPGSLCSFWAAHSC*QLFPLL Trigger: GAGCAAAGGAAAGAGTTGGCAGCAGGAGTGAGCAGC...CCAAAAACTGCAAAGGGACCCAGGGCCCAGGGCAAATCCCTGGAATCCACTCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS-3UTR GCA 90 bp | GAAAACTGGAGTGGATTCCAGGGATTTGCCCTGGGCCCTGGGTCCCTTTGCAGTGGTGCTGCTCACTCCTaGTGCCAACTCTTTCCTTTG | + |
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Preference number: 4 (lower is better) Translates to: ENWSGFQGFALGPGSLCSGAAHS*CQLFPL Trigger: CAAAGGAAAGAGTTGGCAGCAGGAGTGAGCAGCACC...ACTGCAAAGGGACCCAGGGCCCAGGGCAAATCCCTGGAATCCACTCCAGTTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS-3UTR GCA 90 bp | AGGGATTTGCCCTGGGCCCTGGGTCCCTTTGCAGTTTTTGGCTCTGAGTTATACTCTCCTGTCCTCTGGTaGTGCTCACTCCTGCTGCCA | + |
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Preference number: 4 (lower is better) Translates to: RDLPWALGPFAVFGSELYSPVLW*CSLLLP Trigger: TGGCAGCAGGAGTGAGCAGCACCAGAGGACAGGAGA...GTATAACTCAGAGCCAAAAACTGCAAAGGGACCCAGGGCCCAGGGCAAATCCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS-3UTR GCA 90 bp | GAAAACTGGAGTGGATTCCAGGGATTTGCCCTGGGCCCTGGGTCCCTTTGCAGTATCTTGGCCACGTGGTaGCAGGCTTTTTCCAGCCAA | + |
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Preference number: 4 (lower is better) Translates to: ENWSGFQGFALGPGSLCSILATW*QAFSSQ Trigger: TTGGCTGGAAAAAGCCTGGCACCACGTGGCCAAGAT...ACTGCAAAGGGACCCAGGGCCCAGGGCAAATCCCTGGAATCCACTCCAGTTTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS-3UTR CCA 90 bp | GAAAACTGGAGTGGATTCCAGGGATTTGCCCTGGGCCCTGGGTCCCTTTGCAGTCATGACATCAGGGAGTaGAAGGATGGGACTGGTGCA | + |
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Preference number: 4 (lower is better) Translates to: ENWSGFQGFALGPGSLCSHDIRE*KDGTGA Trigger: TGCACCAGTCCCATCCTTCCACTCCCTGATGTCATG...ACTGCAAAGGGACCCAGGGCCCAGGGCAAATCCCTGGAATCCACTCCAGTTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS-3UTR TCA 90 bp | CCAGGGATTTGCCCTGGGCCCTGGGTCCCTTTGCAGTTTTTGGCTCTGAGTTATGGAGAGGCTGGCAGGTaGACTGGGAATATACTCCAA | + |
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Preference number: 4 (lower is better) Translates to: PGICPGPWVPLQFLALSYGEAGR*TGNILQ Trigger: TTGGAGTATATTCCCAGTTCACCTGCCAGCCTCTCC...ATAACTCAGAGCCAAAAACTGCAAAGGGACCCAGGGCCCAGGGCAAATCCCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS-3UTR GCA 90 bp | ATTCCAGGGATTTGCCCTGGGCCCTGGGTCCCTTTGCAGTTTTTGGCTCTGAGTGCTCATCATGTCCCCTaGTGGGATGGCATAGGTACT | + |
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Preference number: 4 (lower is better) Translates to: IPGICPGPWVPLQFLALSAHHVP*WDGIGT Trigger: AGTACCTATGCCATCCCAGCAGGGGACATGATGAGC...ACTCAGAGCCAAAAACTGCAAAGGGACCCAGGGCCCAGGGCAAATCCCTGGAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS-3UTR GCA 90 bp | GAAAACTGGAGTGGATTCCAGGGATTTGCCCTGGGCCCTGGGTCCCTTTGCAGTCTTGCTTGCCATCCCTaGCAAGGCAATCTTCATGCT | + |
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Preference number: 4 (lower is better) Translates to: ENWSGFQGFALGPGSLCSLACHP*QGNLHA Trigger: AGCATGAAGATTGCCTTGGCAGGGATGGCAAGCAAG...ACTGCAAAGGGACCCAGGGCCCAGGGCAAATCCCTGGAATCCACTCCAGTTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS-3UTR CCA 90 bp | AGAAAACTGGAGTGGATTCCAGGGATTTGCCCTGGGCCCTGGGTCCCTTTGCAGGAGGACAACTGGGACTaGGTCATTTGCTGTTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: RKLEWIPGICPGPWVPLQEDNWD*VICCFS Trigger: GGAGAAACAGCAAATGACCCAGTCCCAGTTGTCCTC...CTGCAAAGGGACCCAGGGCCCAGGGCAAATCCCTGGAATCCACTCCAGTTTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS-3UTR CCA 90 bp | GGAGTGGATTCCAGGGATTTGCCCTGGGCCCTGGGTCCCTTTGCAGTTTTTGGCGTCTCTTCATTTGAGTaGCTTTCGCTTGGCAAGGTC | + |
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Preference number: 4 (lower is better) Translates to: GVDSRDLPWALGPFAVFGVSSFE*LSLGKV Trigger: GACCTTGCCAAGCGAAAGCCACTCAAATGAAGAGAC...GCCAAAAACTGCAAAGGGACCCAGGGCCCAGGGCAAATCCCTGGAATCCACTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS-3UTR CCA 90 bp | CCAGGGATTTGCCCTGGGCCCTGGGTCCCTTTGCAGTTTTTGGCTCTGAGTTATTTTGTGATGGGGACATaGCTGACCCCTTTGTGCCAC | + |
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Preference number: 4 (lower is better) Translates to: PGICPGPWVPLQFLALSYFVMGT*LTPLCH Trigger: GTGGCACAAAGGGGTCAGCCATGTCCCCATCACAAA...ATAACTCAGAGCCAAAAACTGCAAAGGGACCCAGGGCCCAGGGCAAATCCCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| 3UTR CAA 72 bp | AACTGCACTGAGAAAACTGGAGTGGATTCCAGGGATTaGCCCTGGGCCCTGGGTCCCTTTGCAGTTTTTGGC | + |
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Preference number: 4 (lower is better) Translates to: NCTEKTGVDSRD*PWALGPFAVFG Trigger: GCCAAAAACTGCAAAGGGACCCAGGGCCCAGGGCAAATCCCTGGAATCCACTCCAGTTTTCTCAGTGCAGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS-3UTR GCA 90 bp | AACTGGAGTGGATTCCAGGGATTTGCCCTGGGCCCTGGGTCCCTTTGCAGTTTTGCCTTCAGGCATGTTTaGTGCCAAGCTCAAAGAGTC | + |
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Preference number: 4 (lower is better) Translates to: NWSGFQGFALGPGSLCSFAFRHV*CQAQRV Trigger: GACTCTTTGAGCTTGGCAGCAAACATGCCTGAAGGC...AAAACTGCAAAGGGACCCAGGGCCCAGGGCAAATCCCTGGAATCCACTCCAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS-3UTR GCA 90 bp | CCAGGGATTTGCCCTGGGCCCTGGGTCCCTTTGCAGTTTTTGGCTCTGAGTTATGCCACCTATTGCGCTTaGTGCCTTTGTCCTTGTCAT | + |
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Preference number: 4 (lower is better) Translates to: PGICPGPWVPLQFLALSYATYCA*CLCPCH Trigger: ATGACAAGGACAAAGGCAGCAAGCGCAATAGGTGGC...ATAACTCAGAGCCAAAAACTGCAAAGGGACCCAGGGCCCAGGGCAAATCCCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS-3UTR CCA 90 bp | AGGGATTTGCCCTGGGCCCTGGGTCCCTTTGCAGTTTTTGGCTCTGAGTTATACCTTTGCGGGAGAGGCTaGCAGGTGAACTGGGAATAT | + |
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Preference number: 4 (lower is better) Translates to: RDLPWALGPFAVFGSELYLCGRG*QVNWEY Trigger: ATATTCCCAGTTCACCTGCCAGCCTCTCCCGCAAAG...GTATAACTCAGAGCCAAAAACTGCAAAGGGACCCAGGGCCCAGGGCAAATCCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS-3UTR TCA 90 bp | AGGGATTTGCCCTGGGCCCTGGGTCCCTTTGCAGTTTTTGGCTCTGAGTTATACAGGTCACTGTCTCCATaGCCTCGGATGTCACAGAAT | + |
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Preference number: 4 (lower is better) Translates to: RDLPWALGPFAVFGSELYRSLSP*PRMSQN Trigger: ATTCTGTGACATCCGAGGTCATGGAGACAGTGACCT...GTATAACTCAGAGCCAAAAACTGCAAAGGGACCCAGGGCCCAGGGCAAATCCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS-3UTR GCA 90 bp | GAAAACTGGAGTGGATTCCAGGGATTTGCCCTGGGCCCTGGGTCCCTTTGCAGTTCTTTGGCGACATTTTaGCAGTGCTTGCTATGGTCA | + |
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Preference number: 4 (lower is better) Translates to: ENWSGFQGFALGPGSLCSSLATF*QCLLWS Trigger: TGACCATAGCAAGCACTGGCAAAATGTCGCCAAAGA...ACTGCAAAGGGACCCAGGGCCCAGGGCAAATCCCTGGAATCCACTCCAGTTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS-3UTR GCA 90 bp | AGGGATTTGCCCTGGGCCCTGGGTCCCTTTGCAGTTTTTGGCTCTGAGTTATACACCTATTGCGCTTGCTaGCTTTGTCCTTGTCATCGC | + |
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Preference number: 4 (lower is better) Translates to: RDLPWALGPFAVFGSELYTYCAC*LCPCHR Trigger: GCGATGACAAGGACAAAGGCAGCAAGCGCAATAGGT...GTATAACTCAGAGCCAAAAACTGCAAAGGGACCCAGGGCCCAGGGCAAATCCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS-3UTR TCA 90 bp | AACTGGAGTGGATTCCAGGGATTTGCCCTGGGCCCTGGGTCCCTTTGCAGTTTTAATTTGTTACAGTCATaGTCTCTTTGCGGGAGAGGC | + |
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Preference number: 4 (lower is better) Translates to: NWSGFQGFALGPGSLCSFNLLQS*SLCGRG Trigger: GCCTCTCCCGCAAAGAGATCATGACTGTAACAAATT...AAAACTGCAAAGGGACCCAGGGCCCAGGGCAAATCCCTGGAATCCACTCCAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS-3UTR TCA 90 bp | AGGGATTTGCCCTGGGCCCTGGGTCCCTTTGCAGTTTTTGGCTCTGAGTTATACATGTCACAGAATCAATaGTTTCCAGGCCCTGGCCAT | + |
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Preference number: 4 (lower is better) Translates to: RDLPWALGPFAVFGSELYMSQNQ*FPGPGH Trigger: ATGGCCAGGGCCTGGAAATCATTGATTCTGTGACAT...GTATAACTCAGAGCCAAAAACTGCAAAGGGACCCAGGGCCCAGGGCAAATCCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS-3UTR CCA 90 bp | CCAGGGATTTGCCCTGGGCCCTGGGTCCCTTTGCAGTTTTTGGCTCTGAGTTATCCATATCTGGTGATCTaGATGAAGTCGCTCTCGAAT | + |
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Preference number: 4 (lower is better) Translates to: PGICPGPWVPLQFLALSYPYLVI*MKSLSN Trigger: ATTCGAGAGCGACTTCATCCAGATCACCAGATATGG...ATAACTCAGAGCCAAAAACTGCAAAGGGACCCAGGGCCCAGGGCAAATCCCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS-3UTR CCA 90 bp | TGGAGTGGATTCCAGGGATTTGCCCTGGGCCCTGGGTCCCTTTGCAGTTTTTGGCTTGCTATGGTCAAATaGCTTTTGCTTCCTCTTGCT | + |
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Preference number: 4 (lower is better) Translates to: WSGFQGFALGPGSLCSFWLAMVK*LLLPLA Trigger: AGCAAGAGGAAGCAAAAGCCATTTGACCATAGCAAG...CCAAAAACTGCAAAGGGACCCAGGGCCCAGGGCAAATCCCTGGAATCCACTCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS-3UTR CCA 90 bp | CCAGGGATTTGCCCTGGGCCCTGGGTCCCTTTGCAGTTTTTGGCTCTGAGTTATTGCCAGTGCTTGCTATaGTCAAATGGCTTTTGCTTC | + |
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Preference number: 4 (lower is better) Translates to: PGICPGPWVPLQFLALSYCQCLL*SNGFCF Trigger: GAAGCAAAAGCCATTTGACCATAGCAAGCACTGGCA...ATAACTCAGAGCCAAAAACTGCAAAGGGACCCAGGGCCCAGGGCAAATCCCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS-3UTR TCA 90 bp | AACTGGAGTGGATTCCAGGGATTTGCCCTGGGCCCTGGGTCCCTTTGCAGTTTTACCTCTGTGACTGGTTaGTTTTTGAAACTCCTTGTC | + |
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Preference number: 4 (lower is better) Translates to: NWSGFQGFALGPGSLCSFTSVTG*FLKLLV Trigger: GACAAGGAGTTTCAAAAATCAACCAGTCACAGAGGT...AAAACTGCAAAGGGACCCAGGGCCCAGGGCAAATCCCTGGAATCCACTCCAGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS-3UTR GCA 90 bp | TGGAGTGGATTCCAGGGATTTGCCCTGGGCCCTGGGTCCCTTTGCAGTTTTTGGTCATACTCTCCTTTGTaGAACTGCTGCTGTAATTTC | + |
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Preference number: 4 (lower is better) Translates to: WSGFQGFALGPGSLCSFWSYSPL*NCCCNF Trigger: GAAATTACAGCAGCAGTTGCACAAAGGAGAGTATGA...CCAAAAACTGCAAAGGGACCCAGGGCCCAGGGCAAATCCCTGGAATCCACTCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS-3UTR GCA 90 bp | AGGGATTTGCCCTGGGCCCTGGGTCCCTTTGCAGTTTTTGGCTCTGAGTTATACTTCAGGCATGTTTGCTaGCAAGCTCAAAGAGTCTAC | + |
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Preference number: 4 (lower is better) Translates to: RDLPWALGPFAVFGSELYFRHVC*QAQRVY Trigger: GTAGACTCTTTGAGCTTGGCAGCAAACATGCCTGAA...GTATAACTCAGAGCCAAAAACTGCAAAGGGACCCAGGGCCCAGGGCAAATCCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS-3UTR CCA 90 bp | GTCCTTTATTTAAACTGCACTGAGAAAACTGGAGTGGATTCCAGGGATTTGCCCCTCATCGAATGGTGCTaGTCGGGCCAGCAGCATGAC | + |
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Preference number: 4 (lower is better) Translates to: VLYLNCTEKTGVDSRDLPLIEWC*SGQQHD Trigger: GTCATGCTGCTGGCCCGACCAGCACCATTCGATGAG...GGGCAAATCCCTGGAATCCACTCCAGTTTTCTCAGTGCAGTTTAAATAAAGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS-3UTR CCA 90 bp | AGGGATTTGCCCTGGGCCCTGGGTCCCTTTGCAGTTTTTGGCTCTGAGTTATACTTTCCTTATGGGCTTTaGTACTGGTCTCATAGGCTT | + |
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Preference number: 4 (lower is better) Translates to: RDLPWALGPFAVFGSELYFPYGL*YWSHRL Trigger: AAGCCTATGAGACCAGTACCAAAGCCCATAAGGAAA...GTATAACTCAGAGCCAAAAACTGCAAAGGGACCCAGGGCCCAGGGCAAATCCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS-3UTR GCA 90 bp | GTCCTTTATTTAAACTGCACTGAGAAAACTGGAGTGGATTCCAGGGATTTGCCCGCCAACTCTTTCCTTTaGTCTCTGGTCCCTTCTCGA | + |
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Preference number: 4 (lower is better) Translates to: VLYLNCTEKTGVDSRDLPANSFL*SLVPSR Trigger: TCGAGAAGGGACCAGAGAGCAAAGGAAAGAGTTGGC...GGGCAAATCCCTGGAATCCACTCCAGTTTTCTCAGTGCAGTTTAAATAAAGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS-3UTR CCA 90 bp | GTCCTTTATTTAAACTGCACTGAGAAAACTGGAGTGGATTCCAGGGATTTGCCCCTTTCCTTTGCTCTCTaGTCCCTTCTCGACCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: VLYLNCTEKTGVDSRDLPLSFAL*SLLDLL Trigger: AAGGAGGTCGAGAAGGGACCAGAGAGCAAAGGAAAG...GGGCAAATCCCTGGAATCCACTCCAGTTTTCTCAGTGCAGTTTAAATAAAGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS-3UTR GCA 90 bp | GTCCTTTATTTAAACTGCACTGAGAAAACTGGAGTGGATTCCAGGGATTTGCCCTGGTCAAATGGCTTTTaGTTCCTCTTGCTCCCAAGG | + |
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Preference number: 4 (lower is better) Translates to: VLYLNCTEKTGVDSRDLPWSNGF*FLLLPR Trigger: CCTTGGGAGCAAGAGGAAGCAAAAGCCATTTGACCA...GGGCAAATCCCTGGAATCCACTCCAGTTTTCTCAGTGCAGTTTAAATAAAGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS-3UTR CCA 90 bp | GTCCTTTATTTAAACTGCACTGAGAAAACTGGAGTGGATTCCAGGGATTTGCCCCTGATGCCGACTCTCTaGCAAGGACTTTTGAGCTTA | + |
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Preference number: 4 (lower is better) Translates to: VLYLNCTEKTGVDSRDLPLMPTL*QGLLSL Trigger: TAAGCTCAAAAGTCCTTGCCAGAGAGTCGGCATCAG...GGGCAAATCCCTGGAATCCACTCCAGTTTTCTCAGTGCAGTTTAAATAAAGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS-3UTR GCA 90 bp | GTCCTTTATTTAAACTGCACTGAGAAAACTGGAGTGGATTCCAGGGATTTGCCCTGGGACTGGGTCATTTaGTGTTTCTCCAACAGACTT | + |
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Preference number: 4 (lower is better) Translates to: VLYLNCTEKTGVDSRDLPWDWVI*CFSNRL Trigger: AAGTCTGTTGGAGAAACAGCAAATGACCCAGTCCCA...GGGCAAATCCCTGGAATCCACTCCAGTTTTCTCAGTGCAGTTTAAATAAAGGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS-3UTR CCA 90 bp | GTCCTTTATTTAAACTGCACTGAGAAAACTGGAGTGGATTCCAGGGATTTGCCCCAACACCTCTGTGACTaGTTGATTTTTGAAACTCCT | + |
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Preference number: 4 (lower is better) Translates to: VLYLNCTEKTGVDSRDLPQHLCD*LIFETP Trigger: AGGAGTTTCAAAAATCAACCAGTCACAGAGGTGTTG...GGGCAAATCCCTGGAATCCACTCCAGTTTTCTCAGTGCAGTTTAAATAAAGGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS TCA 90 bp | CTCGTAGAGGCAGAGCTGGCAGTGGAGATGGTCCGGGACAGTTTGTaGGAGCTCCGGGACTCCTTTGTGATGGGGACATGGCTGACCCCT | + |
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Preference number: 5 (lower is better) Translates to: LVEAELAVEMVRDSL*ELRDSFVMGTWLTP Trigger: AGGGGTCAGCCATGTCCCCATCACAAAGGAGTCCCGGAGCTCTCACAAACTGTCCCGGACCATCTCCACTGCCAGCTCTGCCTCTACGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS-3UTR CAA 90 bp | GAAAACTGGAGTGGATTCCAGGGATTTGCCCTGGGCCCTGGGTCCCTTTGCAGTTTGCCTTTGGTGCTGTaGGTGGACTGGCCATGTCCC | + |
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Preference number: 5 (lower is better) Translates to: ENWSGFQGFALGPGSLCSLPLVL*VDWPCP Trigger: GGGACATGGCCAGTCCACCAACAGCACCAAAGGCAA...ACTGCAAAGGGACCCAGGGCCCAGGGCAAATCCCTGGAATCCACTCCAGTTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS GCA 90 bp | GAGCTCCGGGACTCCTTTGTGATGGGGACATGGCTGACCCCTTTGTaGCACCTATTGCGCTTGCTGCCTTTGTCCTTGTCATCGCCAACA | + |
|
Preference number: 5 (lower is better) Translates to: ELRDSFVMGTWLTPL*HLLRLLPLSLSSPT Trigger: TGTTGGCGATGACAAGGACAAAGGCAGCAAGCGCAATAGGTGGCACAAAGGGGTCAGCCATGTCCCCATCACAAAGGAGTCCCGGAGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS-3UTR CAA 90 bp | GAAAACTGGAGTGGATTCCAGGGATTTGCCCTGGGCCCTGGGTCCCTTTGCAGTACAGTCATGATCTCTTaGCGGGAGAGGCTGGCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: ENWSGFQGFALGPGSLCSTVMIS*RERLAG Trigger: ACCTGCCAGCCTCTCCCGCAAAGAGATCATGACTGT...ACTGCAAAGGGACCCAGGGCCCAGGGCAAATCCCTGGAATCCACTCCAGTTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS-3UTR CAA 90 bp | CCAGGGATTTGCCCTGGGCCCTGGGTCCCTTTGCAGTTTTTGGCTCTGAGTTATATTCTGCCCACCCTCTaGCTCGTAGAGGCAGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PGICPGPWVPLQFLALSYILPTL*LVEAEL Trigger: CAGCTCTGCCTCTACGAGCAAGAGGGTGGGCAGAAT...ATAACTCAGAGCCAAAAACTGCAAAGGGACCCAGGGCCCAGGGCAAATCCCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS-3UTR CAA 90 bp | TGGAGTGGATTCCAGGGATTTGCCCTGGGCCCTGGGTCCCTTTGCAGTTTTTGGTTGCTGCCTTTGTCCTaGTCATCGCCAACACCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: WSGFQGFALGPGSLCSFWLLPLS*SSPTPL Trigger: CAGAGGTGTTGGCGATGACAAGGACAAAGGCAGCAA...CCAAAAACTGCAAAGGGACCCAGGGCCCAGGGCAAATCCCTGGAATCCACTCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS-3UTR CAA 90 bp | AGAAAACTGGAGTGGATTCCAGGGATTTGCCCTGGGCCCTGGGTCCCTTTGCAGTTGCGCTTGCTGCCTTaGTCCTTGTCATCGCCAACA | + |
|
Preference number: 5 (lower is better) Translates to: RKLEWIPGICPGPWVPLQLRLLP*SLSSPT Trigger: TGTTGGCGATGACAAGGACAAAGGCAGCAAGCGCAA...CTGCAAAGGGACCCAGGGCCCAGGGCAAATCCCTGGAATCCACTCCAGTTTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS-3UTR CAA 90 bp | CCAGGGATTTGCCCTGGGCCCTGGGTCCCTTTGCAGTTTTTGGCTCTGAGTTATACATGGCTGACCCCTTaGTGCCACCTATTGCGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: PGICPGPWVPLQFLALSYTWLTP*CHLLRL Trigger: CAAGCGCAATAGGTGGCACAAAGGGGTCAGCCATGT...ATAACTCAGAGCCAAAAACTGCAAAGGGACCCAGGGCCCAGGGCAAATCCCTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS GCA 90 bp | TGCGGGAGAGGCTGGCAGGTGAACTGGGAATATACTCCAAGGACTTaGTTGCCATCCCTGCCAAGGCAATCTTCATGCTCTTTGGCGACA | + |
|
Preference number: 5 (lower is better) Translates to: CGRGWQVNWEYTPRT*LPSLPRQSSCSLAT Trigger: TGTCGCCAAAGAGCATGAAGATTGCCTTGGCAGGGATGGCAAGCAAGTCCTTGGAGTATATTCCCAGTTCACCTGCCAGCCTCTCCCGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS GCA 90 bp | TCCTGTCCTCTGGTGCTGCTCACTCCTGCTGCCAACTCTTTCCTTTaGTCTCTGGTCCCTTCTCGACCTCCTTTCCTTATGGGCTTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: SCPLVLLTPAANSFL*SLVPSRPPFLMGFG Trigger: ACCAAAGCCCATAAGGAAAGGAGGTCGAGAAGGGACCAGAGAGCAAAGGAAAGAGTTGGCAGCAGGAGTGAGCAGCACCAGAGGACAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS GCA 90 bp | CTGTCTTGTGACCTTCTCCTGTCCTCTGGTGCTGCTCACTCCTGCTaGCAACTCTTTCCTTTGCTCTCTGGTCCCTTCTCGACCTCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: LSCDLLLSSGAAHSC*QLFPLLSGPFSTSF Trigger: AAAGGAGGTCGAGAAGGGACCAGAGAGCAAAGGAAAGAGTTGGCAGCAGGAGTGAGCAGCACCAGAGGACAGGAGAAGGTCACAAGACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS-3UTR CAA 90 bp | AACTGGAGTGGATTCCAGGGATTTGCCCTGGGCCCTGGGTCCCTTTGCAGTTTTCTAGGTCACACACTATaGCCTCTGATGCCGACTCTC | + |
|
Preference number: 5 (lower is better) Translates to: NWSGFQGFALGPGSLCSFLGHTL*PLMPTL Trigger: GAGAGTCGGCATCAGAGGCAATAGTGTGTGACCTAG...AAAACTGCAAAGGGACCCAGGGCCCAGGGCAAATCCCTGGAATCCACTCCAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS-3UTR CAA 90 bp | AGGGATTTGCCCTGGGCCCTGGGTCCCTTTGCAGTTTTTGGCTCTGAGTTATACACTCCAAGGACTTGCTaGCCATCCCTGCCAAGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: RDLPWALGPFAVFGSELYTPRTC*PSLPRQ Trigger: TTGCCTTGGCAGGGATGGCAAGCAAGTCCTTGGAGT...GTATAACTCAGAGCCAAAAACTGCAAAGGGACCCAGGGCCCAGGGCAAATCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS CCA 90 bp | GTTCTTCATCCAGAAAAGGCGTGCTCATCATGTCCCCTGCTGGGATaGCATAGGTACTGGTGTTACTGTCCACAGGTGGTCTCAGGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: VLHPEKACSSCPLLG*HRYWCYCPQVVSGG Trigger: ACCTCCTGAGACCACCTGTGGACAGTAACACCAGTACCTATGCCATCCCAGCAGGGGACATGATGAGCACGCCTTTTCTGGATGAAGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS CCA 90 bp | GTCTCCATGACCTCGGATGTCACAGAATCAATGATTTCCAGGCCCTaGCCATCCTCTGCCTCCATGATGGCCTTTACGTCGGTTGTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: VSMTSDVTESMISRP*PSSASMMAFTSVVS Trigger: AGAGACAACCGACGTAAAGGCCATCATGGAGGCAGAGGATGGCCAGGGCCTGGAAATCATTGATTCTGTGACATCCGAGGTCATGGAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS-3UTR CAA 90 bp | ATTCCAGGGATTTGCCCTGGGCCCTGGGTCCCTTTGCAGTTTTTGGCTCTGAGTACCATTCGGACACGATaGTGCACGTCGATCACTTCT | + |
|
Preference number: 5 (lower is better) Translates to: IPGICPGPWVPLQFLALSTIRTR*CTSITS Trigger: AGAAGTGATCGACGTGCACAATCGTGTCCGAATGGT...ACTCAGAGCCAAAAACTGCAAAGGGACCCAGGGCCCAGGGCAAATCCCTGGAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS-3UTR CAA 90 bp | AGAAAACTGGAGTGGATTCCAGGGATTTGCCCTGGGCCCTGGGTCCCTTTGCAGATGGTCAAATGGCTTTaGCTTCCTCTTGCTCCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: RKLEWIPGICPGPWVPLQMVKWL*LPLAPK Trigger: CTTGGGAGCAAGAGGAAGCAAAAGCCATTTGACCAT...CTGCAAAGGGACCCAGGGCCCAGGGCAAATCCCTGGAATCCACTCCAGTTTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS-3UTR CAA 90 bp | AGGGATTTGCCCTGGGCCCTGGGTCCCTTTGCAGTTTTTGGCTCTGAGTTATACTGCCAACTCTTTCCTTaGCTCTCTGGTCCCTTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: RDLPWALGPFAVFGSELYCQLFP*LSGPFS Trigger: CGAGAAGGGACCAGAGAGCAAAGGAAAGAGTTGGCA...GTATAACTCAGAGCCAAAAACTGCAAAGGGACCCAGGGCCCAGGGCAAATCCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS CCA 90 bp | CTTCAGTTCTTCATCCAGAAAAGGCGTGCTCATCATGTCCCCTGCTaGGATGGCATAGGTACTGGTGTTACTGTCCACAGGTGGTCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: LQFFIQKRRAHHVPC*DGIGTGVTVHRWSQ Trigger: CTGAGACCACCTGTGGACAGTAACACCAGTACCTATGCCATCCCAGCAGGGGACATGATGAGCACGCCTTTTCTGGATGAAGAACTGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS CCA 90 bp | CTCTCTGGTCCCTTCTCGACCTCCTTTCCTTATGGGCTTTGGTACTaGTCTCATAGGCTTTCCGACGTCCAGTCTCTTCATTTGAGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: LSGPFSTSFPYGLWY*SHRLSDVQSLHLSG Trigger: GCCACTCAAATGAAGAGACTGGACGTCGGAAAGCCTATGAGACCAGTACCAAAGCCCATAAGGAAAGGAGGTCGAGAAGGGACCAGAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS-3UTR CAA 90 bp | AGGGATTTGCCCTGGGCCCTGGGTCCCTTTGCAGTTTTTGGCTCTGAGTTATACAGCCTTCAGGCATGTTaGCTGCCAAGCTCAAAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: RDLPWALGPFAVFGSELYSLQAC*LPSSKS Trigger: ACTCTTTGAGCTTGGCAGCAAACATGCCTGAAGGCT...GTATAACTCAGAGCCAAAAACTGCAAAGGGACCCAGGGCCCAGGGCAAATCCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS CCA 90 bp | CCTTTGCTCTCTGGTCCCTTCTCGACCTCCTTTCCTTATGGGCTTTaGTACTGGTCTCATAGGCTTTCCGACGTCCAGTCTCTTCATTTG | + |
|
Preference number: 5 (lower is better) Translates to: PLLSGPFSTSFPYGL*YWSHRLSDVQSLHL Trigger: CAAATGAAGAGACTGGACGTCGGAAAGCCTATGAGACCAGTACCAAAGCCCATAAGGAAAGGAGGTCGAGAAGGGACCAGAGAGCAAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS GCA 90 bp | TATCTTCAGTTCTTCATCCAGAAAAGGCGTGCTCATCATGTCCCCTaGTGGGATGGCATAGGTACTGGTGTTACTGTCCACAGGTGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: YLQFFIQKRRAHHVP*WDGIGTGVTVHRWS Trigger: AGACCACCTGTGGACAGTAACACCAGTACCTATGCCATCCCAGCAGGGGACATGATGAGCACGCCTTTTCTGGATGAAGAACTGAAGATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS GCA 90 bp | TGCCAAGGCAATCTTCATGCTCTTTGGCGACATTTTGCCAGTGCTTaGTATGGTCAAATGGCTTTTGCTTCCTCTTGCTCCCAAGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: CQGNLHALWRHFASA*YGQMAFASSCSQGS Trigger: GCTGCCTTGGGAGCAAGAGGAAGCAAAAGCCATTTGACCATAGCAAGCACTGGCAAAATGTCGCCAAAGAGCATGAAGATTGCCTTGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS GCA 90 bp | TCCCTGCCAAGGCAATCTTCATGCTCTTTGGCGACATTTTGCCAGTaGTTGCTATGGTCAAATGGCTTTTGCTTCCTCTTGCTCCCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: SLPRQSSCSLATFCQ*LLWSNGFCFLLLPR Trigger: CCTTGGGAGCAAGAGGAAGCAAAAGCCATTTGACCATAGCAAGCACTGGCAAAATGTCGCCAAAGAGCATGAAGATTGCCTTGGCAGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS CCA 90 bp | GAAAAGGCGTGCTCATCATGTCCCCTGCTGGGATGGCATAGGTACTaGTGTTACTGTCCACAGGTGGTCTCAGGAGGTCAATCAATTTTT | + |
|
Preference number: 5 (lower is better) Translates to: EKACSSCPLLGWHRY*CYCPQVVSGGQSIF Trigger: AAAAATTGATTGACCTCCTGAGACCACCTGTGGACAGTAACACCAGTACCTATGCCATCCCAGCAGGGGACATGATGAGCACGCCTTTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS CCA 90 bp | AAGAGTCTACTAGGTCACACACTATTGCCTCTGATGCCGACTCTCTaGCAAGGACTTTTGAGCTTACTTTGGGCGTGGGTATCCTGGACA | + |
|
Preference number: 5 (lower is better) Translates to: KSLLGHTLLPLMPTL*QGLLSLLWAWVSWT Trigger: TGTCCAGGATACCCACGCCCAAAGTAAGCTCAAAAGTCCTTGCCAGAGAGTCGGCATCAGAGGCAATAGTGTGTGACCTAGTAGACTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS-3UTR CAA 90 bp | AGAAAACTGGAGTGGATTCCAGGGATTTGCCCTGGGCCCTGGGTCCCTTTGCAGAATATCGGCGCGTACTaGAATATATCATACTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: RKLEWIPGICPGPWVPLQNIGAY*NISYSP Trigger: AGGAGAGTATGATATATTCAAGTACGCGCCGATATT...CTGCAAAGGGACCCAGGGCCCAGGGCAAATCCCTGGAATCCACTCCAGTTTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS TCA 90 bp | GAGCTTACTTTGGGCGTGGGTATCCTGGACACAATAGTGGATATGTaGGAATCATGGGTTTCCTCCCCACCAGAAAAAGCAGAAGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: ELTLGVGILDTIVDM*ESWVSSPPEKAEEL Trigger: CAGCTCTTCTGCTTTTTCTGGTGGGGAGGAAACCCATGATTCTCACATATCCACTATTGTGTCCAGGATACCCACGCCCAAAGTAAGCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS TCA 90 bp | CTTGCTGCCTTTGTCCTTGTCATCGCCAACACCTCTGTGACTGGTTaGTTTTTGAAACTCCTTGTCCCCTTCTGTCTTGTGACCTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LAAFVLVIANTSVTG*FLKLLVPFCLVTFS Trigger: GGAGAAGGTCACAAGACAGAAGGGGACAAGGAGTTTCAAAAATCAACCAGTCACAGAGGTGTTGGCGATGACAAGGACAAAGGCAGCAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS GCA 90 bp | TATACTCCAAGGACTTGCTTGCCATCCCTGCCAAGGCAATCTTCATaGTCTTTGGCGACATTTTGCCAGTGCTTGCTATGGTCAAATGGC | + |
|
Preference number: 5 (lower is better) Translates to: YTPRTCLPSLPRQSS*SLATFCQCLLWSNG Trigger: GCCATTTGACCATAGCAAGCACTGGCAAAATGTCGCCAAAGAGCATGAAGATTGCCTTGGCAGGGATGGCAAGCAAGTCCTTGGAGTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS GCA 90 bp | TTCGCTTGGCAAGGTCAAGGCGAGGACAACTGGGACTGGGTCATTTaGTGTTTCTCCAACAGACTTTCCTGTAGTCTCAATCCTGGAATT | + |
|
Preference number: 5 (lower is better) Translates to: FAWQGQGEDNWDWVI*CFSNRLSCSLNPGI Trigger: AATTCCAGGATTGAGACTACAGGAAAGTCTGTTGGAGAAACAGCAAATGACCCAGTCCCAGTTGTCCTCGCCTTGACCTTGCCAAGCGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS-3UTR CAA 90 bp | AGGGATTTGCCCTGGGCCCTGGGTCCCTTTGCAGTTTTTGGCTCTGAGTTATACATATCATACTCTCCTTaGTGCAACTGCTGCTGTAAT | + |
|
Preference number: 5 (lower is better) Translates to: RDLPWALGPFAVFGSELYISYSP*CNCCCN Trigger: ATTACAGCAGCAGTTGCACAAAGGAGAGTATGATAT...GTATAACTCAGAGCCAAAAACTGCAAAGGGACCCAGGGCCCAGGGCAAATCCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS TCA 90 bp | CGGCCAGTAGCAAACTTGAGACGTAGCTGTTGTTCATCACGTCTGTaGACAGAAATCCTTACAAACTTCAAAGGAAGGAGCCTAGTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: RPVANLRRSCCSSRL*TEILTNFKGRSLVS Trigger: GCTCACTAGGCTCCTTCCTTTGAAGTTTGTAAGGATTTCTGTTCACAGACGTGATGAACAACAGCTACGTCTCAAGTTTGCTACTGGCCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS-3UTR CAA 90 bp | GTCCTTTATTTAAACTGCACTGAGAAAACTGGAGTGGATTCCAGGGATTTGCCCGTCCAGTCTCTTCATTaGAGTGGCTTTCGCTTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: VLYLNCTEKTGVDSRDLPVQSLH*SGFRLA Trigger: TGCCAAGCGAAAGCCACTCAAATGAAGAGACTGGAC...GGGCAAATCCCTGGAATCCACTCCAGTTTTCTCAGTGCAGTTTAAATAAAGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS-3UTR CAA 90 bp | GTCCTTTATTTAAACTGCACTGAGAAAACTGGAGTGGATTCCAGGGATTTGCCCCACCTCTGTGACTGGTaGATTTTTGAAACTCCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: VLYLNCTEKTGVDSRDLPHLCDW*IFETPC Trigger: ACAAGGAGTTTCAAAAATCAACCAGTCACAGAGGTG...GGGCAAATCCCTGGAATCCACTCCAGTTTTCTCAGTGCAGTTTAAATAAAGGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS CAA 72 bp | CGGGACTCCTTTGTGATGGGGACATGGCTGACCCCTTaGTGCCACCTATTGCGCTTGCTGCCTTTGTCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: RDSFVMGTWLTP*CHLLRLLPLSL Trigger: CAAGGACAAAGGCAGCAAGCGCAATAGGTGGCACAAAGGGGTCAGCCATGTCCCCATCACAAAGGAGTCCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS CAA 72 bp | GTGATGGGGACATGGCTGACCCCTTTGTGCCACCTATaGCGCTTGCTGCCTTTGTCCTTGTCATCGCCAACA | + |
|
Preference number: 6 (lower is better) Translates to: VMGTWLTPLCHL*RLLPLSLSSPT Trigger: TGTTGGCGATGACAAGGACAAAGGCAGCAAGCGCAATAGGTGGCACAAAGGGGTCAGCCATGTCCCCATCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS CAA 90 bp | GGAAGGAGCCTAGTGAGCTCCAAGGTCTTTCCAGCCTTGCGTTTTTaGCCTTTGGTGCTGTTGGTGGACTGGCCATGTCCCAGAAGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: GRSLVSSKVFPALRF*PLVLLVDWPCPRSS Trigger: TGAGCTTCTGGGACATGGCCAGTCCACCAACAGCACCAAAGGCAAAAAACGCAAGGCTGGAAAGACCTTGGAGCTCACTAGGCTCCTTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS CAA 90 bp | TTGCGGGAGAGGCTGGCAGGTGAACTGGGAATATACTCCAAGGACTaGCTTGCCATCCCTGCCAAGGCAATCTTCATGCTCTTTGGCGAC | + |
|
Preference number: 6 (lower is better) Translates to: LRERLAGELGIYSKD*LAIPAKAIFMLFGD Trigger: GTCGCCAAAGAGCATGAAGATTGCCTTGGCAGGGATGGCAAGCAAGTCCTTGGAGTATATTCCCAGTTCACCTGCCAGCCTCTCCCGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS GCA 72 bp | GGCTGGCAGGTGAACTGGGAATATACTCCAAGGACTTaGTTGCCATCCCTGCCAAGGCAATCTTCATGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: GWQVNWEYTPRT*LPSLPRQSSCS Trigger: AGAGCATGAAGATTGCCTTGGCAGGGATGGCAAGCAAGTCCTTGGAGTATATTCCCAGTTCACCTGCCAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS CCA 72 bp | TCTGGTCCCTTCTCGACCTCCTTTCCTTATGGGCTTTaGTACTGGTCTCATAGGCTTTCCGACGTCCAGTCT | + |
|
Preference number: 6 (lower is better) Translates to: SGPFSTSFPYGL*YWSHRLSDVQS Trigger: AGACTGGACGTCGGAAAGCCTATGAGACCAGTACCAAAGCCCATAAGGAAAGGAGGTCGAGAAGGGACCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS CAA 72 bp | AGGCTGGCAGGTGAACTGGGAATATACTCCAAGGACTaGCTTGCCATCCCTGCCAAGGCAATCTTCATGCTC | + |
|
Preference number: 6 (lower is better) Translates to: RLAGELGIYSKD*LAIPAKAIFML Trigger: GAGCATGAAGATTGCCTTGGCAGGGATGGCAAGCAAGTCCTTGGAGTATATTCCCAGTTCACCTGCCAGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS CAA 90 bp | GGGAGAGGCTGGCAGGTGAACTGGGAATATACTCCAAGGACTTGCTaGCCATCCCTGCCAAGGCAATCTTCATGCTCTTTGGCGACATTT | + |
|
Preference number: 6 (lower is better) Translates to: GRGWQVNWEYTPRTC*PSLPRQSSCSLATF Trigger: AAATGTCGCCAAAGAGCATGAAGATTGCCTTGGCAGGGATGGCAAGCAAGTCCTTGGAGTATATTCCCAGTTCACCTGCCAGCCTCTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS GCA 72 bp | TTCTTCATCCAGAAAAGGCGTGCTCATCATGTCCCCTaGTGGGATGGCATAGGTACTGGTGTTACTGTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: FFIQKRRAHHVP*WDGIGTGVTVH Trigger: GTGGACAGTAACACCAGTACCTATGCCATCCCAGCAGGGGACATGATGAGCACGCCTTTTCTGGATGAAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS GCA 72 bp | AGGACTTGCTTGCCATCCCTGCCAAGGCAATCTTCATaGTCTTTGGCGACATTTTGCCAGTGCTTGCTATGG | + |
|
Preference number: 6 (lower is better) Translates to: RTCLPSLPRQSS*SLATFCQCLLW Trigger: CCATAGCAAGCACTGGCAAAATGTCGCCAAAGAGCATGAAGATTGCCTTGGCAGGGATGGCAAGCAAGTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS CCA 72 bp | CTAGGTCACACACTATTGCCTCTGATGCCGACTCTCTaGCAAGGACTTTTGAGCTTACTTTGGGCGTGGGTA | + |
|
Preference number: 6 (lower is better) Translates to: LGHTLLPLMPTL*QGLLSLLWAWV Trigger: TACCCACGCCCAAAGTAAGCTCAAAAGTCCTTGCCAGAGAGTCGGCATCAGAGGCAATAGTGTGTGACCTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
||
| CDS CCA 72 bp | TTTGGCGACATTTTGCCAGTGCTTGCTATGGTCAAATaGCTTTTGCTTCCTCTTGCTCCCAAGGCAGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: FGDILPVLAMVK*LLLPLAPKAAS Trigger: GGAGGCTGCCTTGGGAGCAAGAGGAAGCAAAAGCCATTTGACCATAGCAAGCACTGGCAAAATGTCGCCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS CCA 72 bp | TTCGCTTGGCAAGGTCAAGGCGAGGACAACTGGGACTaGGTCATTTGCTGTTTCTCCAACAGACTTTCCTGT | + |
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Preference number: 6 (lower is better) Translates to: FAWQGQGEDNWD*VICCFSNRLSC Trigger: ACAGGAAAGTCTGTTGGAGAAACAGCAAATGACCCAGTCCCAGTTGTCCTCGCCTTGACCTTGCCAAGCGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS CCA 72 bp | CCCTTCTCGACCTCCTTTCCTTATGGGCTTTGGTACTaGTCTCATAGGCTTTCCGACGTCCAGTCTCTTCAT | + |
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Preference number: 6 (lower is better) Translates to: PFSTSFPYGLWY*SHRLSDVQSLH Trigger: ATGAAGAGACTGGACGTCGGAAAGCCTATGAGACCAGTACCAAAGCCCATAAGGAAAGGAGGTCGAGAAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS CAA 90 bp | CTGCCAAGGCAATCTTCATGCTCTTTGGCGACATTTTGCCAGTGCTaGCTATGGTCAAATGGCTTTTGCTTCCTCTTGCTCCCAAGGCAG | + |
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Preference number: 6 (lower is better) Translates to: LPRQSSCSLATFCQC*LWSNGFCFLLLPRQ Trigger: CTGCCTTGGGAGCAAGAGGAAGCAAAAGCCATTTGACCATAGCAAGCACTGGCAAAATGTCGCCAAAGAGCATGAAGATTGCCTTGGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS TCA 72 bp | TACAGTCATGATCTCTTTGCGGGAGAGGCTGGCAGGTaGACTGGGAATATACTCCAAGGACTTGCTTGCCAT | + |
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Preference number: 6 (lower is better) Translates to: YSHDLFAGEAGR*TGNILQGLACH Trigger: ATGGCAAGCAAGTCCTTGGAGTATATTCCCAGTTCACCTGCCAGCCTCTCCCGCAAAGAGATCATGACTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS CAA 72 bp | TGGCAGGTGAACTGGGAATATACTCCAAGGACTTGCTaGCCATCCCTGCCAAGGCAATCTTCATGCTCTTTG | + |
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Preference number: 6 (lower is better) Translates to: WQVNWEYTPRTC*PSLPRQSSCSL Trigger: CAAAGAGCATGAAGATTGCCTTGGCAGGGATGGCAAGCAAGTCCTTGGAGTATATTCCCAGTTCACCTGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS CAA 90 bp | TCGCTCTCGAATATCGGCGCGTACTTGAATATATCATACTCTCCTTaGTGCAACTGCTGCTGTAATTTCCCCGTGGCGGTGTCGAACAAG | + |
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Preference number: 6 (lower is better) Translates to: SLSNIGAYLNISYSP*CNCCCNFPVAVSNK Trigger: CTTGTTCGACACCGCCACGGGGAAATTACAGCAGCAGTTGCACAAAGGAGAGTATGATATATTCAAGTACGCGCCGATATTCGAGAGCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS CAA 90 bp | GCTTGCTGCCTTTGTCCTTGTCATCGCCAACACCTCTGTGACTGGTaGATTTTTGAAACTCCTTGTCCCCTTCTGTCTTGTGACCTTCTC | + |
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Preference number: 6 (lower is better) Translates to: ACCLCPCHRQHLCDW*IFETPCPLLSCDLL Trigger: GAGAAGGTCACAAGACAGAAGGGGACAAGGAGTTTCAAAAATCAACCAGTCACAGAGGTGTTGGCGATGACAAGGACAAAGGCAGCAAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS TCA 72 bp | TTGGGCGTGGGTATCCTGGACACAATAGTGGATATGTaGGAATCATGGGTTTCCTCCCCACCAGAAAAAGCA | + |
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Preference number: 6 (lower is better) Translates to: LGVGILDTIVDM*ESWVSSPPEKA Trigger: TGCTTTTTCTGGTGGGGAGGAAACCCATGATTCTCACATATCCACTATTGTGTCCAGGATACCCACGCCCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS GCA 72 bp | AGTGCTTGCTATGGTCAAATGGCTTTTGCTTCCTCTTaGTCCCAAGGCAGCCTCCTCTACTGTAGCTTTGTT | + |
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Preference number: 6 (lower is better) Translates to: SACYGQMAFASS*SQGSLLYCSFV Trigger: AACAAAGCTACAGTAGAGGAGGCTGCCTTGGGAGCAAGAGGAAGCAAAAGCCATTTGACCATAGCAAGCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS GCA 72 bp | CAAGGTCAAGGCGAGGACAACTGGGACTGGGTCATTTaGTGTTTCTCCAACAGACTTTCCTGTAGTCTCAAT | + |
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Preference number: 6 (lower is better) Translates to: QGQGEDNWDWVI*CFSNRLSCSLN Trigger: ATTGAGACTACAGGAAAGTCTGTTGGAGAAACAGCAAATGACCCAGTCCCAGTTGTCCTCGCCTTGACCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS CAA 90 bp | TTTCCTGTAGTCTCAATCCTGGAATTTGTTACAGTCATGATCTCTTaGCGGGAGAGGCTGGCAGGTGAACTGGGAATATACTCCAAGGAC | + |
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Preference number: 6 (lower is better) Translates to: FPVVSILEFVTVMIS*RERLAGELGIYSKD Trigger: GTCCTTGGAGTATATTCCCAGTTCACCTGCCAGCCTCTCCCGCAAAGAGATCATGACTGTAACAAATTCCAGGATTGAGACTACAGGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS GCA 72 bp | CTGCCAAGGCAATCTTCATGCTCTTTGGCGACATTTTaGCAGTGCTTGCTATGGTCAAATGGCTTTTGCTTC | + |
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Preference number: 6 (lower is better) Translates to: LPRQSSCSLATF*QCLLWSNGFCF Trigger: GAAGCAAAAGCCATTTGACCATAGCAAGCACTGGCAAAATGTCGCCAAAGAGCATGAAGATTGCCTTGGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS CAA 72 bp | AATATCGGCGCGTACTTGAATATATCATACTCTCCTTaGTGCAACTGCTGCTGTAATTTCCCCGTGGCGGTG | + |
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Preference number: 6 (lower is better) Translates to: NIGAYLNISYSP*CNCCCNFPVAV Trigger: CACCGCCACGGGGAAATTACAGCAGCAGTTGCACAAAGGAGAGTATGATATATTCAAGTACGCGCCGATATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS CAA 72 bp | GTCTCAATCCTGGAATTTGTTACAGTCATGATCTCTTaGCGGGAGAGGCTGGCAGGTGAACTGGGAATATAC | + |
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Preference number: 6 (lower is better) Translates to: VSILEFVTVMIS*RERLAGELGIY Trigger: GTATATTCCCAGTTCACCTGCCAGCCTCTCCCGCAAAGAGATCATGACTGTAACAAATTCCAGGATTGAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS TCA 72 bp | TTTGTCCTTGTCATCGCCAACACCTCTGTGACTGGTTaGTTTTTGAAACTCCTTGTCCCCTTCTGTCTTGTG | + |
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Preference number: 6 (lower is better) Translates to: FVLVIANTSVTG*FLKLLVPFCLV Trigger: CACAAGACAGAAGGGGACAAGGAGTTTCAAAAATCAACCAGTCACAGAGGTGTTGGCGATGACAAGGACAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS CAA 72 bp | CTTTGTCCTTGTCATCGCCAACACCTCTGTGACTGGTaGATTTTTGAAACTCCTTGTCCCCTTCTGTCTTGT | + |
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Preference number: 6 (lower is better) Translates to: LCPCHRQHLCDW*IFETPCPLLSC Trigger: ACAAGACAGAAGGGGACAAGGAGTTTCAAAAATCAACCAGTCACAGAGGTGTTGGCGATGACAAGGACAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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| CDS TCA 72 bp | GCAAACTTGAGACGTAGCTGTTGTTCATCACGTCTGTaGACAGAAATCCTTACAAACTTCAAAGGAAGGAGC | + |
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Preference number: 6 (lower is better) Translates to: ANLRRSCCSSRL*TEILTNFKGRS Trigger: GCTCCTTCCTTTGAAGTTTGTAAGGATTTCTGTTCACAGACGTGATGAACAACAGCTACGTCTCAAGTTTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171798.2 |
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