Pregenerated sensors for FAM47E (Mus musculus)
Ensembl gene IDs: ENSMUSG00000057068Ensembl transcript IDs: ENSMUST00000082382.8, ENSMUST00000131166.9, ENSMUST00000146417.9, ENSMUST00000149617.2, ENSMUST00000175974.2, ENSMUST00000176448.8, ENSMUST00000176621.8
Found 118 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCAGGCTCCGTACCTCATCTTTACCCGCTTCGGCTTCTGAGGATTTaGTCTTCCAGAGGACCGAGGTTCACTCCAGTGCCCACAGTGTTC | + |
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Preference number: 1 (lower is better) Translates to: PGSVPHLYPLRLLRI*SSRGPRFTPVPTVF Trigger: GAACACTGTGGGCACTGGAGTGAACCTCGGTCCTCTGGAAGAGCAAATCCTCAGAAGCCGAAGCGGGTAAAGATGAGGTACGGAGCCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149617.2 |
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| 3UTR TCA 90 bp | TTCAGGTACCAGGCTCCGTACCTCATCTTTACCCGCTTCGGCTTCTaGGGATTTGCTCTTCCAGAGGACCGAGGTTCACTCCAGTGCCCA | + |
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Preference number: 1 (lower is better) Translates to: FRYQAPYLIFTRFGF*GFALPEDRGSLQCP Trigger: TGGGCACTGGAGTGAACCTCGGTCCTCTGGAAGAGCAAATCCTCAGAAGCCGAAGCGGGTAAAGATGAGGTACGGAGCCTGGTACCTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149617.2 |
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| 3UTR TCA 90 bp | ACCCTCTGTAACTGCGGCTCCAGGGCATTCAACGCTTCAGGCTTCTaGAGGCTCCTAGACTTGTGTGCACCTACCCACATGCAGACATAC | + |
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Preference number: 1 (lower is better) Translates to: TLCNCGSRAFNASGF*RLLDLCAPTHMQTY Trigger: GTATGTCTGCATGTGGGTAGGTGCACACAAGTCTAGGAGCCTTCAGAAGCCTGAAGCGTTGAATGCCCTGGAGCCGCAGTTACAGAGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131166.9 ENSMUST00000175974.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGGTACCAGGCTCCGTACCTCATCTTTACCCGCTTCGGCTTCTGAGGATTTGAGGTCCTCGGCCCAGTaGCAGAAGTCGGTGACTCCT | + |
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Preference number: 2 (lower is better) Translates to: SGTRLRTSSLPASASEDLRSSAQ*QKSVTP Trigger: AGGAGTCACCGACTTCTGCCACTGGGCCGAGGACCT...CAAATCCTCAGAAGCCGAAGCGGGTAAAGATGAGGTACGGAGCCTGGTACCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149617.2 |
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| 3UTR CAA 90 bp | TGCCCACAGTGTTCTCGCAGGGAAGGTGGTCTATTGATGAAGAGTTaGTCAAGGTCCTCGGCCCAGTGGCAGAAGTCGGTGACTCCTCTG | + |
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Preference number: 2 (lower is better) Translates to: CPQCSRREGGLLMKS*SRSSAQWQKSVTPL Trigger: CAGAGGAGTCACCGACTTCTGCCACTGGGCCGAGGACCTTGACAAACTCTTCATCAATAGACCACCTTCCCTGCGAGAACACTGTGGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149617.2 |
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| 3UTR CAA 90 bp | ACCAGGCTCCGTACCTCATCTTTACCCGCTTCGGCTTCTGAGGATTaGCTCTTCCAGAGGACCGAGGTTCACTCCAGTGCCCACAGTGTT | + |
|
Preference number: 2 (lower is better) Translates to: TRLRTSSLPASASED*LFQRTEVHSSAHSV Trigger: AACACTGTGGGCACTGGAGTGAACCTCGGTCCTCTGGAAGAGCAAATCCTCAGAAGCCGAAGCGGGTAAAGATGAGGTACGGAGCCTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149617.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGTGTGTTGGTGCAGAGCTGCAACTCTAGACCCTGAGAGGCTAACACAGGGGCAAAACATTGATCAGTaGAGGCTGGAGAGATGGATC | + |
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Preference number: 2 (lower is better) Translates to: QVCWCRAATLDPERLTQGQNIDQ*RLERWI Trigger: GATCCATCTCTCCAGCCTCCACTGATCAATGTTTTG...CCCCTGTGTTAGCCTCTCAGGGTCTAGAGTTGCAGCTCTGCACCAACACACCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000131166.9 ENSMUST00000175974.2 |
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| 3UTR-3UTR TCA 90 bp | CTAGGCCACATAGCAAGACTCTCCCTAAAGAAGGCCAAACCCCCAAACCAAACAAACGCTTCAGGCTTCTaGAGGCTCCTAGACTTGTGT | + |
|
Preference number: 2 (lower is better) Translates to: LGHIARLSLKKAKPPNQTNASGF*RLLDLC Trigger: ACACAAGTCTAGGAGCCTTCAGAAGCCTGAAGCGTT...TGTTTGGTTTGGGGGTTTGGCCTTCTTTAGGGAGAGTCTTGCTATGTGGCCTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000131166.9 ENSMUST00000175974.2 |
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| 3UTR-3UTR GCA 90 bp | TATTATTTTGTGCACCAGGTGTGTTGGTGCAGAGCTGCAACTCTAGACCCTGAGACAACCCTCTGTAACTaGGGCTCCAGGGCATTCAAC | + |
|
Preference number: 2 (lower is better) Translates to: YYFVHQVCWCRAATLDPETTLCN*GSRAFN Trigger: GTTGAATGCCCTGGAGCCGCAGTTACAGAGGGTTGT...CTCAGGGTCTAGAGTTGCAGCTCTGCACCAACACACCTGGTGCACAAAATAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131166.9 ENSMUST00000175974.2 |
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| 3UTR-3UTR GCA 90 bp | GCTTTGTGTGAGACCATGGGGTCGACCAGAGGTTCATCCGCTCTTTGCCTCTTCAGAGTGAATCCACTTTaGTTGACTTTTCTTCACAAA | + |
|
Preference number: 2 (lower is better) Translates to: ALCETMGSTRGSSALCLFRVNPL*LTFLHK Trigger: TTTGTGAAGAAAAGTCAAGCAAAGTGGATTCACTCT...GAAGAGGCAAAGAGCGGATGAACCTCTGGTCGACCCCATGGTCTCACACAAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149617.2 |
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| 3UTR-3UTR GCA 90 bp | CTAGGCCACATAGCAAGACTCTCCCTAAAGAAGGCCAAACCCCCAAACCAAACATTTTATATTTGTAGATaGTGCCAGGTTGAAGCCTTC | + |
|
Preference number: 2 (lower is better) Translates to: LGHIARLSLKKAKPPNQTFYICR*CQVEAF Trigger: GAAGGCTTCAACCTGGCAGCATCTACAAATATAAAA...TGTTTGGTTTGGGGGTTTGGCCTTCTTTAGGGAGAGTCTTGCTATGTGGCCTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000131166.9 ENSMUST00000175974.2 |
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| 3UTR-3UTR TCA 90 bp | AATATACAAAATGTATTATTTTGTGCACCAGGTGTGTTGGTGCAGAGCTGCAACAACGCTTCAGGCTTCTaGAGGCTCCTAGACTTGTGT | + |
|
Preference number: 2 (lower is better) Translates to: NIQNVLFCAPGVLVQSCNNASGF*RLLDLC Trigger: ACACAAGTCTAGGAGCCTTCAGAAGCCTGAAGCGTT...GTTGCAGCTCTGCACCAACACACCTGGTGCACAAAATAATACATTTTGTATATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000131166.9 ENSMUST00000175974.2 |
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| 3UTR-3UTR GCA 90 bp | CAAAATGTATTATTTTGTGCACCAGGTGTGTTGGTGCAGAGCTGCAACTCTAGACTTCACGGAGGGCACTaGTATATTCTACTTATTAAT | + |
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Preference number: 2 (lower is better) Translates to: QNVLFCAPGVLVQSCNSRLHGGH*YILLIN Trigger: ATTAATAAGTAGAATATAGCAGTGCCCTCCGTGAAG...TCTAGAGTTGCAGCTCTGCACCAACACACCTGGTGCACAAAATAATACATTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000131166.9 ENSMUST00000175974.2 |
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| 3UTR-3UTR GCA 90 bp | AATATACAAAATGTATTATTTTGTGCACCAGGTGTGTTGGTGCAGAGCTGCAACTTTTATATTTGTAGATaGTGCCAGGTTGAAGCCTTC | + |
|
Preference number: 2 (lower is better) Translates to: NIQNVLFCAPGVLVQSCNFYICR*CQVEAF Trigger: GAAGGCTTCAACCTGGCAGCATCTACAAATATAAAA...GTTGCAGCTCTGCACCAACACACCTGGTGCACAAAATAATACATTTTGTATATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000131166.9 ENSMUST00000175974.2 |
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| 3UTR GCA 72 bp | GAGACCATGGGGTCGACCAGAGGTTCATCCGCTCTTTaGCTCTTCCACAAGCTGGTGTTCAGGTACCAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: ETMGSTRGSSAL*LFHKLVFRYQA Trigger: AGCCTGGTACCTGAACACCAGCTTGTGGAAGAGGCAAAGAGCGGATGAACCTCTGGTCGACCCCATGGTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149617.2 |
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| 3UTR TCA 72 bp | AACTGCGGCTCCAGGGCATTCAACGCTTCAGGCTTCTaGAGGCTCCTAGACTTGTGTGCACCTACCCACATG | + |
|
Preference number: 3 (lower is better) Translates to: NCGSRAFNASGF*RLLDLCAPTHM Trigger: CATGTGGGTAGGTGCACACAAGTCTAGGAGCCTTCAGAAGCCTGAAGCGTTGAATGCCCTGGAGCCGCAGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131166.9 ENSMUST00000175974.2 |
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| 3UTR TCA 72 bp | CAGGCTCCGTACCTCATCTTTACCCGCTTCGGCTTCTaGGGATTTGCTCTTCCAGAGGACCGAGGTTCACTC | + |
|
Preference number: 3 (lower is better) Translates to: QAPYLIFTRFGF*GFALPEDRGSL Trigger: GAGTGAACCTCGGTCCTCTGGAAGAGCAAATCCTCAGAAGCCGAAGCGGGTAAAGATGAGGTACGGAGCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149617.2 |
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| 3UTR GCA 72 bp | GTACCTCATCTTTACCCGCTTCGGCTTCTGAGGATTTaGTCTTCCAGAGGACCGAGGTTCACTCCAGTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: VPHLYPLRLLRI*SSRGPRFTPVP Trigger: GGGCACTGGAGTGAACCTCGGTCCTCTGGAAGAGCAAATCCTCAGAAGCCGAAGCGGGTAAAGATGAGGTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149617.2 |
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| 3UTR CCA 72 bp | TTCACTCCAGTGCCCACAGTGTTCTCGCAGGGAAGGTaGTCTATTGATGAAGAGTTTGTCAAGGTCCTCGGC | + |
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Preference number: 3 (lower is better) Translates to: FTPVPTVFSQGR*SIDEEFVKVLG Trigger: GCCGAGGACCTTGACAAACTCTTCATCAATAGACCACCTTCCCTGCGAGAACACTGTGGGCACTGGAGTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149617.2 |
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| 3UTR GCA 72 bp | CAACGCTTCAGGCTTCTGAAGGCTCCTAGACTTGTGTaGACCTACCCACATGCAGACATACACAGCTGTACA | + |
|
Preference number: 3 (lower is better) Translates to: QRFRLLKAPRLV*TYPHADIHSCT Trigger: TGTACAGCTGTGTATGTCTGCATGTGGGTAGGTGCACACAAGTCTAGGAGCCTTCAGAAGCCTGAAGCGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000131166.9 ENSMUST00000175974.2 ENSMUST00000176621.8 |
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| 3UTR CCA 72 bp | AGCAAACAAAACATTGATCAGTGGAGGCTGGAGAGATaGATCAGCCATCGGGACAGCTCACTGTTCGTCGAG | + |
|
Preference number: 3 (lower is better) Translates to: SKQNIDQWRLER*ISHRDSSLFVE Trigger: CTCGACGAACAGTGAGCTGTCCCGATGGCTGATCCATCTCTCCAGCCTCCACTGATCAATGTTTTGTTTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131166.9 ENSMUST00000175974.2 |
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| 3UTR CCA 72 bp | CTATTGATGAAGAGTTTGTCAAGGTCCTCGGCCCAGTaGCAGAAGTCGGTGACTCCTCTGTGTACGTCATCA | + |
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Preference number: 3 (lower is better) Translates to: LLMKSLSRSSAQ*QKSVTPLCTSS Trigger: TGATGACGTACACAGAGGAGTCACCGACTTCTGCCACTGGGCCGAGGACCTTGACAAACTCTTCATCAATAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149617.2 |
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| 3UTR CCA 72 bp | GAATCCACTTTGCTTGACTTTTCTTCACAAAGCCACTaGCCTGAACGTGAGATCAGCGTCTTCTTAGGCGGG | + |
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Preference number: 3 (lower is better) Translates to: ESTLLDFSSQSH*PEREISVFLGG Trigger: CCCGCCTAAGAAGACGCTGATCTCACGTTCAGGCCAGTGGCTTTGTGAAGAAAAGTCAAGCAAAGTGGATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149617.2 |
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| 3UTR-3UTR CAA 90 bp | TCTTCCACAAGCTGGTGTTCAGGTACCAGGCTCCGTACCTCATCTTTACCCGCTGTGAATCCACTTTGCTaGACTTTTCTTCACAAAGCC | + |
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Preference number: 3 (lower is better) Translates to: SSTSWCSGTRLRTSSLPAVNPLC*TFLHKA Trigger: GGCTTTGTGAAGAAAAGTCAAGCAAAGTGGATTCAC...AGCGGGTAAAGATGAGGTACGGAGCCTGGTACCTGAACACCAGCTTGTGGAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149617.2 |
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| 3UTR-3UTR CAA 90 bp | TATTATTTTGTGCACCAGGTGTGTTGGTGCAGAGCTGCAACTCTAGACCCTGAGCAAGCAAACAAAACATaGATCAGTGGAGGCTGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: YYFVHQVCWCRAATLDPEQANKT*ISGGWR Trigger: TCTCCAGCCTCCACTGATCAATGTTTTGTTTGCTTG...CTCAGGGTCTAGAGTTGCAGCTCTGCACCAACACACCTGGTGCACAAAATAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000131166.9 ENSMUST00000175974.2 |
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| 3UTR CCA 72 bp | ATATACAAAATGTATTATTTTGTGCACCAGGTGTGTTaGTGCAGAGCTGCAACTCTAGACCCTGAGAGGCTA | + |
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Preference number: 3 (lower is better) Translates to: IYKMYYFVHQVC*CRAATLDPERL Trigger: TAGCCTCTCAGGGTCTAGAGTTGCAGCTCTGCACCAACACACCTGGTGCACAAAATAATACATTTTGTATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000131166.9 ENSMUST00000175974.2 |
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| CDS-3UTR GCA 90 bp | CAGGTGTGTTGGTGCAGAGCTGCAACTCTAGACCCTGAGAGGCTAACACAGGGGCGGCTTCTGAGGATTTaGTCTTCCAGAGGACCGAGG | + |
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Preference number: 4 (lower is better) Translates to: QVCWCRAATLDPERLTQGRLLRI*SSRGPR Trigger: CCTCGGTCCTCTGGAAGAGCAAATCCTCAGAAGCCG...CCCCTGTGTTAGCCTCTCAGGGTCTAGAGTTGCAGCTCTGCACCAACACACCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131166.9 |
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| CDS-3UTR CCA 90 bp | CAACGCTTCAGGCTTCTGAAGGCTCCTAGACTTGTGTGCACCTACCCACATGCAAGGTCCTCGGCCCAGTaGCAGAAGTCGGTGACTCCT | + |
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Preference number: 4 (lower is better) Translates to: QRFRLLKAPRLVCTYPHARSSAQ*QKSVTP Trigger: AGGAGTCACCGACTTCTGCCACTGGGCCGAGGACCT...TGCATGTGGGTAGGTGCACACAAGTCTAGGAGCCTTCAGAAGCCTGAAGCGTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131166.9 ENSMUST00000176621.8 |
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| 3UTR CAA 72 bp | CGTACCTCATCTTTACCCGCTTCGGCTTCTGAGGATTaGCTCTTCCAGAGGACCGAGGTTCACTCCAGTGCC | + |
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Preference number: 4 (lower is better) Translates to: RTSSLPASASED*LFQRTEVHSSA Trigger: GGCACTGGAGTGAACCTCGGTCCTCTGGAAGAGCAAATCCTCAGAAGCCGAAGCGGGTAAAGATGAGGTACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149617.2 |
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| CDS-3UTR GCA 90 bp | CAGGTGTGTTGGTGCAGAGCTGCAACTCTAGACCCTGAGAGGCTAACACAGGGGAGGCAGACAATCACATaGCAGGTGCTCACGGATGAT | + |
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Preference number: 4 (lower is better) Translates to: QVCWCRAATLDPERLTQGRQTIT*QVLTDD Trigger: ATCATCCGTGAGCACCTGGCATGTGATTGTCTGCCT...CCCCTGTGTTAGCCTCTCAGGGTCTAGAGTTGCAGCTCTGCACCAACACACCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131166.9 ENSMUST00000175974.2 |
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| 3UTR CAA 72 bp | TGTTCTCGCAGGGAAGGTGGTCTATTGATGAAGAGTTaGTCAAGGTCCTCGGCCCAGTGGCAGAAGTCGGTG | + |
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Preference number: 4 (lower is better) Translates to: CSRREGGLLMKS*SRSSAQWQKSV Trigger: CACCGACTTCTGCCACTGGGCCGAGGACCTTGACAAACTCTTCATCAATAGACCACCTTCCCTGCGAGAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149617.2 |
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| CDS-3UTR CCA 90 bp | TGTGTTCAGTTTTATATTTGTAGATGCTGCCAGGTTGAAGCCTTCACGGAGGGCGCTCTGCCTCTTCTCTaGGGTAGCACTGGGGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: CVQFYICRCCQVEAFTEGALPLL*GSTGGS Trigger: GGAGCCCCCAGTGCTACCCCAGAGAAGAGGCAGAGC...GCCCTCCGTGAAGGCTTCAACCTGGCAGCATCTACAAATATAAAACTGAACACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000146417.9 |
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| CDS-3UTR CCA 90 bp | TGTGTTCAGTTTTATATTTGTAGATGCTGCCAGGTTGAAGCCTTCACGGAGGGCAGGTCCTCGGCCCAGTaGCAGAAGTCGGTGACTCCT | + |
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Preference number: 4 (lower is better) Translates to: CVQFYICRCCQVEAFTEGRSSAQ*QKSVTP Trigger: AGGAGTCACCGACTTCTGCCACTGGGCCGAGGACCT...GCCCTCCGTGAAGGCTTCAACCTGGCAGCATCTACAAATATAAAACTGAACACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000131166.9 ENSMUST00000146417.9 ENSMUST00000176621.8 |
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| CDS-3UTR GCA 90 bp | CAACGCTTCAGGCTTCTGAAGGCTCCTAGACTTGTGTGCACCTACCCACATGCACAATCACATGCCAGGTaGTCACGGATGATGCAAAGA | + |
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Preference number: 4 (lower is better) Translates to: QRFRLLKAPRLVCTYPHAQSHAR*SRMMQR Trigger: TCTTTGCATCATCCGTGAGCACCTGGCATGTGATTG...TGCATGTGGGTAGGTGCACACAAGTCTAGGAGCCTTCAGAAGCCTGAAGCGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000131166.9 ENSMUST00000175974.2 ENSMUST00000176621.8 |
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| CDS-3UTR TCA 90 bp | GAAGCCTTCACGGAGGGCACTGCTATATTCTACTTATTAATTAAACTAATGGGGGCCGGTTCCGCCTTATaGAACGCTTGGGAGGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: EAFTEGTAIFYLLIKLMGAGSAL*NAWEAG Trigger: ACCTGCCTCCCAAGCGTTTCATAAGGCGGAACCGGC...CCCCATTAGTTTAATTAATAAGTAGAATATAGCAGTGCCCTCCGTGAAGGCTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146417.9 |
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| CDS-3UTR TCA 90 bp | ACATTTGTGTTCAGTTTTATATTTGTAGATGCTGCCAGGTTGAAGCCTTCACGGACAGCGTTGCCCCCTTaGGCAGTGTGCTCTGCCTCT | + |
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Preference number: 4 (lower is better) Translates to: TFVFSFIFVDAARLKPSRTALPP*AVCSAS Trigger: AGAGGCAGAGCACACTGCTCAAGGGGGCAACGCTGT...CCGTGAAGGCTTCAACCTGGCAGCATCTACAAATATAAAACTGAACACAAATGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000146417.9 |
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| CDS-3UTR CCA 90 bp | GAAGCCTTCACGGAGGGCACTGCTATATTCTACTTATTAATTAAACTAATGGGGAGGTCCTCGGCCCAGTaGCAGAAGTCGGTGACTCCT | + |
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Preference number: 4 (lower is better) Translates to: EAFTEGTAIFYLLIKLMGRSSAQ*QKSVTP Trigger: AGGAGTCACCGACTTCTGCCACTGGGCCGAGGACCT...CCCCATTAGTTTAATTAATAAGTAGAATATAGCAGTGCCCTCCGTGAAGGCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000082382.8 ENSMUST00000131166.9 ENSMUST00000146417.9 ENSMUST00000176621.8 |
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| CDS-3UTR CCA 90 bp | ATTTGTGTTCAGTTTTATATTTGTAGATGCTGCCAGGTTGAAGCCTTCACGGAGAGGTCCTCGGCCCAGTaGCAGAAGTCGGTGACTCCT | + |
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Preference number: 4 (lower is better) Translates to: ICVQFYICRCCQVEAFTERSSAQ*QKSVTP Trigger: AGGAGTCACCGACTTCTGCCACTGGGCCGAGGACCT...CTCCGTGAAGGCTTCAACCTGGCAGCATCTACAAATATAAAACTGAACACAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000131166.9 ENSMUST00000146417.9 ENSMUST00000176621.8 |
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| CDS-3UTR GCA 90 bp | TTTGTGTTCAGTTTTATATTTGTAGATGCTGCCAGGTTGAAGCCTTCACGGAGGCGGCTTCTGAGGATTTaGTCTTCCAGAGGACCGAGG | + |
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Preference number: 4 (lower is better) Translates to: FVFSFIFVDAARLKPSRRRLLRI*SSRGPR Trigger: CCTCGGTCCTCTGGAAGAGCAAATCCTCAGAAGCCG...CCTCCGTGAAGGCTTCAACCTGGCAGCATCTACAAATATAAAACTGAACACAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131166.9 ENSMUST00000146417.9 |
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| CDS-3UTR GCA 90 bp | TTCACGGAGGGCACTGCTATATTCTACTTATTAATTAAACTAATGGGGCAGTATTGTCCCTCGCAGGCCTaGAAGCAGCTCCCCCTTTGC | + |
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Preference number: 4 (lower is better) Translates to: FTEGTAIFYLLIKLMGQYCPSQA*KQLPLC Trigger: GCAAAGGGGGAGCTGCTTGCAGGCCTGCGAGGGACA...ATACTGCCCCATTAGTTTAATTAATAAGTAGAATATAGCAGTGCCCTCCGTGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175974.2 |
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| CDS-3UTR GCA 90 bp | TTTGTGTTCAGTTTTATATTTGTAGATGCTGCCAGGTTGAAGCCTTCACGGAGGGTCTTCTTAGGCCTTTaGGTGGCTTCGGCTATGCAG | + |
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Preference number: 4 (lower is better) Translates to: FVFSFIFVDAARLKPSRRVFLGL*VASAMQ Trigger: CTGCATAGCCGAAGCCACGCAAAGGCCTAAGAAGAC...CCTCCGTGAAGGCTTCAACCTGGCAGCATCTACAAATATAAAACTGAACACAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131166.9 ENSMUST00000176621.8 |
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| CDS-3UTR CCA 90 bp | TGTGTTCAGTTTTATATTTGTAGATGCTGCCAGGTTGAAGCCTTCACGGAGGGCTTCCTACAAGCTCTGTaGGTTCCTTCATTGGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: CVQFYICRCCQVEAFTEGFLQAL*VPSLAS Trigger: GGAAGCCAATGAAGGAACCCACAGAGCTTGTAGGAA...GCCCTCCGTGAAGGCTTCAACCTGGCAGCATCTACAAATATAAAACTGAACACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146417.9 |
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| CDS-3UTR GCA 90 bp | GAAGCCTTCACGGAGGGCACTGCTATATTCTACTTATTAATTAAACTAATGGGGGTCTTCTTAGGCCTTTaGGTGGCTTCGGCTATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: EAFTEGTAIFYLLIKLMGVFLGL*VASAMQ Trigger: CTGCATAGCCGAAGCCACGCAAAGGCCTAAGAAGAC...CCCCATTAGTTTAATTAATAAGTAGAATATAGCAGTGCCCTCCGTGAAGGCTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000082382.8 ENSMUST00000131166.9 ENSMUST00000176621.8 |
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| CDS-3UTR GCA 90 bp | GAAGCCTTCACGGAGGGCACTGCTATATTCTACTTATTAATTAAACTAATGGGGTTGAGCAGTGTGCTCTaGCTCTTCTCTGGGGTAGCA | + |
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Preference number: 4 (lower is better) Translates to: EAFTEGTAIFYLLIKLMGLSSVL*LFSGVA Trigger: TGCTACCCCAGAGAAGAGGCAGAGCACACTGCTCAA...CCCCATTAGTTTAATTAATAAGTAGAATATAGCAGTGCCCTCCGTGAAGGCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146417.9 |
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| CDS-3UTR CCA 90 bp | TTCACGGAGGGCACTGCTATATTCTACTTATTAATTAAACTAATGGGGCAGTATCTGTTCAAGAAGCCCTaGCATGTCAGCCGGTTCCGC | + |
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Preference number: 4 (lower is better) Translates to: FTEGTAIFYLLIKLMGQYLFKKP*HVSRFR Trigger: GCGGAACCGGCTGACATGCCAGGGCTTCTTGAACAG...ATACTGCCCCATTAGTTTAATTAATAAGTAGAATATAGCAGTGCCCTCCGTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146417.9 |
||
| 3UTR CAA 72 bp | CAAACCCCCAAACCAAACAAACAAGCAAACAAAACATaGATCAGTGGAGGCTGGAGAGATGGATCAGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: QTPKPNKQANKT*ISGGWRDGSAI Trigger: GATGGCTGATCCATCTCTCCAGCCTCCACTGATCAATGTTTTGTTTGCTTGTTTGTTTGGTTTGGGGGTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000131166.9 ENSMUST00000175974.2 |
||
| 3UTR CAA 72 bp | GGAGGAGTCTGTCTTTATAGAGTGAATCCACTTTGCTaGACTTTTCTTCACAAAGCCACTGGCCTGAACGTG | + |
|
Preference number: 4 (lower is better) Translates to: GGVCLYRVNPLC*TFLHKATGLNV Trigger: CACGTTCAGGCCAGTGGCTTTGTGAAGAAAAGTCAAGCAAAGTGGATTCACTCTATAAAGACAGACTCCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149617.2 |
||
| CDS-3UTR TCA 90 bp | TTCACGGAGGGCACTGCTATATTCTACTTATTAATTAAACTAATGGGGCAGTATACCCGCTTCGGCTTCTaGGGATTTGCTCTTCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: FTEGTAIFYLLIKLMGQYTRFGF*GFALPE Trigger: CTCTGGAAGAGCAAATCCTCAGAAGCCGAAGCGGGT...ATACTGCCCCATTAGTTTAATTAATAAGTAGAATATAGCAGTGCCCTCCGTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131166.9 ENSMUST00000146417.9 |
||
| CDS-3UTR GCA 90 bp | GAAGCCTTCACGGAGGGCACTGCTATATTCTACTTATTAATTAAACTAATGGGGAGGCAGACAATCACATaGCAGGTGCTCACGGATGAT | + |
|
Preference number: 4 (lower is better) Translates to: EAFTEGTAIFYLLIKLMGRQTIT*QVLTDD Trigger: ATCATCCGTGAGCACCTGGCATGTGATTGTCTGCCT...CCCCATTAGTTTAATTAATAAGTAGAATATAGCAGTGCCCTCCGTGAAGGCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000082382.8 ENSMUST00000131166.9 ENSMUST00000175974.2 ENSMUST00000176621.8 |
||
| CDS-3UTR GCA 90 bp | GAAGCCTTCACGGAGGGCACTGCTATATTCTACTTATTAATTAAACTAATGGGGCCGATGTCAAACTGCTaGAGGACGAACTCTTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: EAFTEGTAIFYLLIKLMGPMSNC*RTNSSS Trigger: TGAGGAAGAGTTCGTCCTGCAGCAGTTTGACATCGG...CCCCATTAGTTTAATTAATAAGTAGAATATAGCAGTGCCCTCCGTGAAGGCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131166.9 ENSMUST00000146417.9 |
||
| CDS-3UTR GCA 90 bp | GAAGCCTTCACGGAGGGCACTGCTATATTCTACTTATTAATTAAACTAATGGGGCACATCCTCCAGGAATaGCTTCCCAGCTTTCGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: EAFTEGTAIFYLLIKLMGHILQE*LPSFRK Trigger: CTTTCGAAAGCTGGGAAGGCATTCCTGGAGGATGTG...CCCCATTAGTTTAATTAATAAGTAGAATATAGCAGTGCCCTCCGTGAAGGCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146417.9 |
||
| CDS-3UTR CCA 90 bp | TTCACGGAGGGCACTGCTATATTCTACTTATTAATTAAACTAATGGGGCAGTATGCCTCTTCCACAAGCTaGTGTTCAGGTACCAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: FTEGTAIFYLLIKLMGQYASSTS*CSGTRL Trigger: GAGCCTGGTACCTGAACACCAGCTTGTGGAAGAGGC...ATACTGCCCCATTAGTTTAATTAATAAGTAGAATATAGCAGTGCCCTCCGTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000082382.8 ENSMUST00000131166.9 ENSMUST00000146417.9 |
||
| CDS-3UTR CCA 90 bp | ATTTGTGTTCAGTTTTATATTTGTAGATGCTGCCAGGTTGAAGCCTTCACGGAGCGAACTCTTCCTCAATaGCAGAGCTTCCAAGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ICVQFYICRCCQVEAFTERTLPQ*QSFQGP Trigger: AGGACCTTGGAAGCTCTGCCATTGAGGAAGAGTTCG...CTCCGTGAAGGCTTCAACCTGGCAGCATCTACAAATATAAAACTGAACACAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131166.9 ENSMUST00000146417.9 |
||
| CDS-3UTR CCA 90 bp | GAAGCCTTCACGGAGGGCACTGCTATATTCTACTTATTAATTAAACTAATGGGGCGAACTCTTCCTCAATaGCAGAGCTTCCAAGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: EAFTEGTAIFYLLIKLMGRTLPQ*QSFQGP Trigger: AGGACCTTGGAAGCTCTGCCATTGAGGAAGAGTTCG...CCCCATTAGTTTAATTAATAAGTAGAATATAGCAGTGCCCTCCGTGAAGGCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131166.9 ENSMUST00000146417.9 |
||
| CDS-3UTR CCA 90 bp | ACATTTGTGTTCAGTTTTATATTTGTAGATGCTGCCAGGTTGAAGCCTTCACGGCCTTCATTGGCTTCCTaGTATCCTGGCAATAAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: TFVFSFIFVDAARLKPSRPSLAS*YPGNKP Trigger: GGGCTTATTGCCAGGATACCAGGAAGCCAATGAAGG...CCGTGAAGGCTTCAACCTGGCAGCATCTACAAATATAAAACTGAACACAAATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146417.9 |
||
| CDS-3UTR CCA 90 bp | GAAGCCTTCACGGAGGGCACTGCTATATTCTACTTATTAATTAAACTAATGGGGTGTGGGTTCCTTCATTaGCTTCCTGGTATCCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: EAFTEGTAIFYLLIKLMGCGFLH*LPGILA Trigger: TGCCAGGATACCAGGAAGCCAATGAAGGAACCCACA...CCCCATTAGTTTAATTAATAAGTAGAATATAGCAGTGCCCTCCGTGAAGGCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146417.9 |
||
| CDS-3UTR TCA 90 bp | GAAGCCTTCACGGAGGGCACTGCTATATTCTACTTATTAATTAAACTAATGGGGCCAGGTGCTCACGGATaGTGCAAAGAAAATGTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: EAFTEGTAIFYLLIKLMGPGAHG*CKENVR Trigger: CCTTACATTTTCTTTGCATCATCCGTGAGCACCTGG...CCCCATTAGTTTAATTAATAAGTAGAATATAGCAGTGCCCTCCGTGAAGGCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000082382.8 ENSMUST00000131166.9 ENSMUST00000175974.2 ENSMUST00000176621.8 |
||
| CDS-3UTR TCA 90 bp | ACATTTGTGTTCAGTTTTATATTTGTAGATGCTGCCAGGTTGAAGCCTTCACGGGGGGGCAGTCTTTCCTaGAGTTATCCTCTTTCACAA | + |
|
Preference number: 4 (lower is better) Translates to: TFVFSFIFVDAARLKPSRGGSLS*SYPLSQ Trigger: TTGTGAAAGAGGATAACTTCAGGAAAGACTGCCCCC...CCGTGAAGGCTTCAACCTGGCAGCATCTACAAATATAAAACTGAACACAAATGT 43% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000146417.9 |
||
| CDS-3UTR GCA 90 bp | ATTTGTGTTCAGTTTTATATTTGTAGATGCTGCCAGGTTGAAGCCTTCACGGAGCAATCACATGCCAGGTaGTCACGGATGATGCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: ICVQFYICRCCQVEAFTEQSHAR*SRMMQR Trigger: TCTTTGCATCATCCGTGAGCACCTGGCATGTGATTG...CTCCGTGAAGGCTTCAACCTGGCAGCATCTACAAATATAAAACTGAACACAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000131166.9 ENSMUST00000175974.2 ENSMUST00000176621.8 |
||
| CDS-3UTR GCA 90 bp | TTCACGGAGGGCACTGCTATATTCTACTTATTAATTAAACTAATGGGGCAGTATGTCTTCTTAGGCCTTTaGGTGGCTTCGGCTATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FTEGTAIFYLLIKLMGQYVFLGL*VASAMQ Trigger: CTGCATAGCCGAAGCCACGCAAAGGCCTAAGAAGAC...ATACTGCCCCATTAGTTTAATTAATAAGTAGAATATAGCAGTGCCCTCCGTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000082382.8 ENSMUST00000131166.9 ENSMUST00000176621.8 |
||
| CDS-3UTR CCA 90 bp | GAAGCCTTCACGGAGGGCACTGCTATATTCTACTTATTAATTAAACTAATGGGGATGAAGAGTTTGTCCTaGTTCAGCCTCAGCCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: EAFTEGTAIFYLLIKLMGMKSLS*FSLSLR Trigger: TCTCAGGCTGAGGCTGAACCAGGACAAACTCTTCAT...CCCCATTAGTTTAATTAATAAGTAGAATATAGCAGTGCCCTCCGTGAAGGCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131166.9 ENSMUST00000146417.9 |
||
| CDS-3UTR TCA 90 bp | AATATACAAAATGTATTATTTTGTGCACCAGGTGTGTTGGTGCAGAGCTGCAACCCAGGTGCTCACGGATaGTGCAAAGAAAATGTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: NIQNVLFCAPGVLVQSCNPGAHG*CKENVR Trigger: CCTTACATTTTCTTTGCATCATCCGTGAGCACCTGG...GTTGCAGCTCTGCACCAACACACCTGGTGCACAAAATAATACATTTTGTATATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000131166.9 ENSMUST00000175974.2 |
||
| CDS-3UTR GCA 90 bp | TTCACGGAGGGCACTGCTATATTCTACTTATTAATTAAACTAATGGGGCAGTATCCGATGTCAAACTGCTaGAGGACGAACTCTTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: FTEGTAIFYLLIKLMGQYPMSNC*RTNSSS Trigger: TGAGGAAGAGTTCGTCCTGCAGCAGTTTGACATCGG...ATACTGCCCCATTAGTTTAATTAATAAGTAGAATATAGCAGTGCCCTCCGTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131166.9 ENSMUST00000146417.9 |
||
| CDS-3UTR CCA 90 bp | TTCACGGAGGGCACTGCTATATTCTACTTATTAATTAAACTAATGGGGCAGTATAGCTTCTGTAAGTTGTaGGTAGAGAGTCAGCGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: FTEGTAIFYLLIKLMGQYSFCKL*VESQRV Trigger: CACCCGCTGACTCTCTACCCACAACTTACAGAAGCT...ATACTGCCCCATTAGTTTAATTAATAAGTAGAATATAGCAGTGCCCTCCGTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146417.9 |
||
| 3UTR CAA 72 bp | TTTGTGTTCAGTTTTATATTTGTAGATGCTGCCAGGTaGAAGCCTTCACGGAGGGCACTGCTATATTCTACT | + |
|
Preference number: 4 (lower is better) Translates to: FVFSFIFVDAAR*KPSRRALLYST Trigger: AGTAGAATATAGCAGTGCCCTCCGTGAAGGCTTCAACCTGGCAGCATCTACAAATATAAAACTGAACACAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000131166.9 ENSMUST00000146417.9 ENSMUST00000175974.2 ENSMUST00000176621.8 |
||
| CDS-3UTR TCA 90 bp | TTCACGGAGGGCACTGCTATATTCTACTTATTAATTAAACTAATGGGGCAGTATCCAGGTGCTCACGGATaGTGCAAAGAAAATGTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: FTEGTAIFYLLIKLMGQYPGAHG*CKENVR Trigger: CCTTACATTTTCTTTGCATCATCCGTGAGCACCTGG...ATACTGCCCCATTAGTTTAATTAATAAGTAGAATATAGCAGTGCCCTCCGTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000082382.8 ENSMUST00000131166.9 ENSMUST00000175974.2 ENSMUST00000176621.8 |
||
| CDS-3UTR GCA 90 bp | TTCACGGAGGGCACTGCTATATTCTACTTATTAATTAAACTAATGGGGCAGTATCAATCACATGCCAGGTaGTCACGGATGATGCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: FTEGTAIFYLLIKLMGQYQSHAR*SRMMQR Trigger: TCTTTGCATCATCCGTGAGCACCTGGCATGTGATTG...ATACTGCCCCATTAGTTTAATTAATAAGTAGAATATAGCAGTGCCCTCCGTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000082382.8 ENSMUST00000131166.9 ENSMUST00000175974.2 ENSMUST00000176621.8 |
||
| CDS-3UTR CCA 90 bp | TTCACGGAGGGCACTGCTATATTCTACTTATTAATTAAACTAATGGGGCAGTATATGAAGAGTTTGTCCTaGTTCAGCCTCAGCCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: FTEGTAIFYLLIKLMGQYMKSLS*FSLSLR Trigger: TCTCAGGCTGAGGCTGAACCAGGACAAACTCTTCAT...ATACTGCCCCATTAGTTTAATTAATAAGTAGAATATAGCAGTGCCCTCCGTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131166.9 ENSMUST00000146417.9 |
||
| CDS-3UTR TCA 90 bp | ATTTGTGTTCAGTTTTATATTTGTAGATGCTGCCAGGTTGAAGCCTTCACGGAGTTAAAGGTTGAATCTTaGGCTTTGTGTGAGACCATG | + |
|
Preference number: 4 (lower is better) Translates to: ICVQFYICRCCQVEAFTELKVES*ALCETM Trigger: CATGGTCTCACACAAAGCTCAAGATTCAACCTTTAA...CTCCGTGAAGGCTTCAACCTGGCAGCATCTACAAATATAAAACTGAACACAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131166.9 ENSMUST00000146417.9 |
||
| CDS-3UTR TCA 90 bp | TTCACGGAGGGCACTGCTATATTCTACTTATTAATTAAACTAATGGGGCAGTATTTAAAGGTTGAATCTTaGGCTTTGTGTGAGACCATG | + |
|
Preference number: 4 (lower is better) Translates to: FTEGTAIFYLLIKLMGQYLKVES*ALCETM Trigger: CATGGTCTCACACAAAGCTCAAGATTCAACCTTTAA...ATACTGCCCCATTAGTTTAATTAATAAGTAGAATATAGCAGTGCCCTCCGTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000082382.8 ENSMUST00000131166.9 ENSMUST00000146417.9 |
||
| CDS-3UTR GCA 90 bp | GAAGCCTTCACGGAGGGCACTGCTATATTCTACTTATTAATTAAACTAATGGGGAGAGTGAATCCACTTTaGTTGACTTTTCTTCACAAA | + |
|
Preference number: 4 (lower is better) Translates to: EAFTEGTAIFYLLIKLMGRVNPL*LTFLHK Trigger: TTTGTGAAGAAAAGTCAAGCAAAGTGGATTCACTCT...CCCCATTAGTTTAATTAATAAGTAGAATATAGCAGTGCCCTCCGTGAAGGCTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000082382.8 ENSMUST00000131166.9 ENSMUST00000146417.9 ENSMUST00000176621.8 |
||
| CDS-3UTR GCA 90 bp | ACATTTGTGTTCAGTTTTATATTTGTAGATGCTGCCAGGTTGAAGCCTTCACGGAGAGTGAATCCACTTTaGTTGACTTTTCTTCACAAA | + |
|
Preference number: 4 (lower is better) Translates to: TFVFSFIFVDAARLKPSRRVNPL*LTFLHK Trigger: TTTGTGAAGAAAAGTCAAGCAAAGTGGATTCACTCT...CCGTGAAGGCTTCAACCTGGCAGCATCTACAAATATAAAACTGAACACAAATGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000131166.9 ENSMUST00000146417.9 ENSMUST00000176621.8 |
||
| CDS-3UTR GCA 90 bp | TTCACGGAGGGCACTGCTATATTCTACTTATTAATTAAACTAATGGGGCAGTATAGAGTGAATCCACTTTaGTTGACTTTTCTTCACAAA | + |
|
Preference number: 4 (lower is better) Translates to: FTEGTAIFYLLIKLMGQYRVNPL*LTFLHK Trigger: TTTGTGAAGAAAAGTCAAGCAAAGTGGATTCACTCT...ATACTGCCCCATTAGTTTAATTAATAAGTAGAATATAGCAGTGCCCTCCGTGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000082382.8 ENSMUST00000131166.9 ENSMUST00000146417.9 ENSMUST00000176621.8 |
||
| CDS GCA 90 bp | CCTCGCAGGCCTGCAAGCAGCTCCCCCTTTGCGTGGCTTCGGCTATaGAGGATGGAGAGAGACATCGAGGCAGACAATCACATGCCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: PRRPASSSPFAWLRL*RMERDIEADNHMPG Trigger: ACCTGGCATGTGATTGTCTGCCTCGATGTCTCTCTCCATCCTGCATAGCCGAAGCCACGCAAAGGGGGAGCTGCTTGCAGGCCTGCGAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000175974.2 |
||
| CDS GCA 90 bp | CTTAAAGGCTGCTGTCCCTCGCAGGCCTGCAAGCAGCTCCCCCTTTaGGTGGCTTCGGCTATGCAGGATGGAGAGAGACATCGAGGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LKGCCPSQACKQLPL*VASAMQDGERHRGR Trigger: TCTGCCTCGATGTCTCTCTCCATCCTGCATAGCCGAAGCCACGCAAAGGGGGAGCTGCTTGCAGGCCTGCGAGGGACAGCAGCCTTTAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000175974.2 |
||
| CDS GCA 90 bp | AGTCAGCGGGTGCTGAGCCGCCTCAGCTTCCACATCCTCCAGGAATaGCTTCCCAGCTTTCGAAAGCTTAGACAACAGCGTTGCCCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: SQRVLSRLSFHILQE*LPSFRKLRQQRCPL Trigger: AAGGGGGCAACGCTGTTGTCTAAGCTTTCGAAAGCTGGGAAGGCATTCCTGGAGGATGTGGAAGCTGAGGCGGCTCAGCACCCGCTGACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146417.9 |
||
| CDS TCA 90 bp | TTCAGGTACCAGGCTCCGTACCTCATCTTTACCCGCTTCGGCTTCTaGGGATTAAGGTCCTCGGCCCAGTGGCAGAAGTCGGTGACTCCT | + |
|
Preference number: 5 (lower is better) Translates to: FRYQAPYLIFTRFGF*GLRSSAQWQKSVTP Trigger: AGGAGTCACCGACTTCTGCCACTGGGCCGAGGACCTTAATCCTCAGAAGCCGAAGCGGGTAAAGATGAGGTACGGAGCCTGGTACCTGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082382.8 |
||
| CDS GCA 90 bp | CAAAGCCACTGGCCTGAACGTGAGATCAGCGTCTTCTTAGGCCTTTaGGTGGCTTCGGCTATGCAGGATGGAGAGAGACATCGAGGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: QSHWPEREISVFLGL*VASAMQDGERHRGR Trigger: TCTGCCTCGATGTCTCTCTCCATCCTGCATAGCCGAAGCCACGCAAAGGCCTAAGAAGACGCTGATCTCACGTTCAGGCCAGTGGCTTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000082382.8 ENSMUST00000131166.9 ENSMUST00000176448.8 ENSMUST00000176621.8 |
||
| CDS GCA 90 bp | CTCCAGGAATGCCTTCCCAGCTTTCGAAAGCTTAGACAACAGCGTTaGCCCCTTGAGCAGTGTGCTCTGCCTCTTCTCTGGGGTAGCACT | + |
|
Preference number: 5 (lower is better) Translates to: LQECLPSFRKLRQQR*PLEQCALPLLWGST Trigger: AGTGCTACCCCAGAGAAGAGGCAGAGCACACTGCTCAAGGGGGCAACGCTGTTGTCTAAGCTTTCGAAAGCTGGGAAGGCATTCCTGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146417.9 |
||
| CDS CCA 90 bp | TTATCCTCTTTCACAAACACCCAGTGCCGGCTGTTCAAGAAGCCCTaGCATGTCAGCCGGTTCCGCCTTATGAAACGCTTGGGAGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LSSFTNTQCRLFKKP*HVSRFRLMKRLGGR Trigger: CCTGCCTCCCAAGCGTTTCATAAGGCGGAACCGGCTGACATGCCAGGGCTTCTTGAACAGCCGGCACTGGGTGTTTGTGAAAGAGGATAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146417.9 |
||
| CDS CCA 90 bp | CACTGGCCTGAACGTGAGATCAGCGTCTTCTTAGGCGGGCGTTCTTaGGAAGAGCGTTTTCCTACAAGCTCTGTGGGTTCCTTCATTGGC | + |
|
Preference number: 5 (lower is better) Translates to: HWPEREISVFLGGRS*EERFPTSSVGSFIG Trigger: GCCAATGAAGGAACCCACAGAGCTTGTAGGAAAACGCTCTTCCCAAGAACGCCCGCCTAAGAAGACGCTGATCTCACGTTCAGGCCAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146417.9 |
||
| CDS-3UTR CAA 90 bp | CTAGGCCACATAGCAAGACTCTCCCTAAAGAAGGCCAAACCCCCAAACCAAACACAAGCAGCTCCCCCTTaGCGTGGCTTCGGCTATGCA | + |
|
Preference number: 5 (lower is better) Translates to: LGHIARLSLKKAKPPNQTQAAPP*RGFGYA Trigger: TGCATAGCCGAAGCCACGCAAAGGGGGAGCTGCTTG...TGTTTGGTTTGGGGGTTTGGCCTTCTTTAGGGAGAGTCTTGCTATGTGGCCTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000175974.2 |
||
| CDS TCA 90 bp | GAGAGAGACATCGAGGCAGACAATCACATGCCAGGTGCTCACGGATaGTGCAAAGAAAATGTAAGGTGGGAAGCGGCTGGATGCAGGACA | + |
|
Preference number: 5 (lower is better) Translates to: ERDIEADNHMPGAHG*CKENVRWEAAGCRT Trigger: TGTCCTGCATCCAGCCGCTTCCCACCTTACATTTTCTTTGCATCATCCGTGAGCACCTGGCATGTGATTGTCTGCCTCGATGTCTCTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000082382.8 ENSMUST00000131166.9 ENSMUST00000175974.2 ENSMUST00000176448.8 ENSMUST00000176621.8 |
||
| CDS GCA 90 bp | ATGCAGGATGGAGAGAGACATCGAGGCAGACAATCACATGCCAGGTaGTCACGGATGATGCAAAGAAAATGTAAGGTGGGAAGCGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: MQDGERHRGRQSHAR*SRMMQRKCKVGSGW Trigger: CCAGCCGCTTCCCACCTTACATTTTCTTTGCATCATCCGTGAGCACCTGGCATGTGATTGTCTGCCTCGATGTCTCTCTCCATCCTGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000082382.8 ENSMUST00000131166.9 ENSMUST00000175974.2 ENSMUST00000176448.8 ENSMUST00000176621.8 |
||
| CDS CCA 90 bp | TTCTCCTCCGCATATATCTTCTCAAGGAAAAGGTCCTCGGCCCAGTaGCAGAAGTCGGTGACTCCTCTGTGTACGTCATCATGGAGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: FSSAYIFSRKRSSAQ*QKSVTPLCTSSWRS Trigger: ACTCCTCCATGATGACGTACACAGAGGAGTCACCGACTTCTGCCACTGGGCCGAGGACCTTTTCCTTGAGAAGATATATGCGGAGGAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176621.8 |
||
| CDS-3UTR CAA 90 bp | TGTGTTCAGTTTTATATTTGTAGATGCTGCCAGGTTGAAGCCTTCACGGAGGGCCGCCTTATGAAACGCTaGGGAGGCAGGTTCCCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: CVQFYICRCCQVEAFTEGRLMKR*GGRFPR Trigger: CCTCGGGAACCTGCCTCCCAAGCGTTTCATAAGGCG...GCCCTCCGTGAAGGCTTCAACCTGGCAGCATCTACAAATATAAAACTGAACACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146417.9 |
||
| CDS-3UTR CAA 90 bp | CAAGCAAACAAAACATTGATCAGTGGAGGCTGGAGAGATGGATCAGCCATCGGGAGGGAAGGTGGTCTATaGATGAAGAGTTTGTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: QANKTLISGGWRDGSAIGREGGL*MKSLSW Trigger: CCAGGACAAACTCTTCATCAATAGACCACCTTCCCT...CCCGATGGCTGATCCATCTCTCCAGCCTCCACTGATCAATGTTTTGTTTGCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131166.9 |
||
| CDS-3UTR CAA 90 bp | ACATTTGTGTTCAGTTTTATATTTGTAGATGCTGCCAGGTTGAAGCCTTCACGGTCGGCTTCTGAGGATTaGCTCTTCCAGAGGACCGAG | + |
|
Preference number: 5 (lower is better) Translates to: TFVFSFIFVDAARLKPSRSASED*LFQRTE Trigger: CTCGGTCCTCTGGAAGAGCAAATCCTCAGAAGCCGA...CCGTGAAGGCTTCAACCTGGCAGCATCTACAAATATAAAACTGAACACAAATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131166.9 ENSMUST00000146417.9 |
||
| CDS-3UTR CAA 90 bp | AATATACAAAATGTATTATTTTGTGCACCAGGTGTGTTGGTGCAGAGCTGCAACTCGGCTTCTGAGGATTaGCTCTTCCAGAGGACCGAG | + |
|
Preference number: 5 (lower is better) Translates to: NIQNVLFCAPGVLVQSCNSASED*LFQRTE Trigger: CTCGGTCCTCTGGAAGAGCAAATCCTCAGAAGCCGA...GTTGCAGCTCTGCACCAACACACCTGGTGCACAAAATAATACATTTTGTATATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131166.9 |
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| CDS-3UTR CAA 90 bp | ACATTTGTGTTCAGTTTTATATTTGTAGATGCTGCCAGGTTGAAGCCTTCACGGCAGAGCTTCTGTAAGTaGTGGGTAGAGAGTCAGCGG | + |
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Preference number: 5 (lower is better) Translates to: TFVFSFIFVDAARLKPSRQSFCK*WVESQR Trigger: CCGCTGACTCTCTACCCACAACTTACAGAAGCTCTG...CCGTGAAGGCTTCAACCTGGCAGCATCTACAAATATAAAACTGAACACAAATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146417.9 |
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| CDS-3UTR CAA 90 bp | TTTGTGTTCAGTTTTATATTTGTAGATGCTGCCAGGTTGAAGCCTTCACGGAGGAGGGAAGGTGGTCTATaGATGAAGAGTTTGTCCTGG | + |
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Preference number: 5 (lower is better) Translates to: FVFSFIFVDAARLKPSRRREGGL*MKSLSW Trigger: CCAGGACAAACTCTTCATCAATAGACCACCTTCCCT...CCTCCGTGAAGGCTTCAACCTGGCAGCATCTACAAATATAAAACTGAACACAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131166.9 ENSMUST00000146417.9 |
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| CDS-3UTR CAA 90 bp | TTCACGGAGGGCACTGCTATATTCTACTTATTAATTAAACTAATGGGGCAGTATCTGTGGGTTCCTTCATaGGCTTCCTGGTATCCTGGC | + |
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Preference number: 5 (lower is better) Translates to: FTEGTAIFYLLIKLMGQYLWVPS*ASWYPG Trigger: GCCAGGATACCAGGAAGCCAATGAAGGAACCCACAG...ATACTGCCCCATTAGTTTAATTAATAAGTAGAATATAGCAGTGCCCTCCGTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146417.9 |
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| CDS-3UTR CAA 90 bp | ATTTGTGTTCAGTTTTATATTTGTAGATGCTGCCAGGTTGAAGCCTTCACGGAGCTATTGATGAAGAGTTaGTCCTGGTTCAGCCTCAGC | + |
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Preference number: 5 (lower is better) Translates to: ICVQFYICRCCQVEAFTELLMKS*SWFSLS Trigger: GCTGAGGCTGAACCAGGACAAACTCTTCATCAATAG...CTCCGTGAAGGCTTCAACCTGGCAGCATCTACAAATATAAAACTGAACACAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000131166.9 ENSMUST00000146417.9 |
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| CDS-3UTR CAA 90 bp | TTTGTGTTCAGTTTTATATTTGTAGATGCTGCCAGGTTGAAGCCTTCACGGAGGGTGAATCCACTTTGCTaGACTTTTCTTCACAAAGCC | + |
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Preference number: 5 (lower is better) Translates to: FVFSFIFVDAARLKPSRRVNPLC*TFLHKA Trigger: GGCTTTGTGAAGAAAAGTCAAGCAAAGTGGATTCAC...CCTCCGTGAAGGCTTCAACCTGGCAGCATCTACAAATATAAAACTGAACACAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000131166.9 ENSMUST00000146417.9 ENSMUST00000176621.8 |
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| CDS-3UTR CAA 90 bp | ATTTGTGTTCAGTTTTATATTTGTAGATGCTGCCAGGTTGAAGCCTTCACGGAGGTGAATCCACTTTGCTaGACTTTTCTTCACAAAGCC | + |
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Preference number: 5 (lower is better) Translates to: ICVQFYICRCCQVEAFTEVNPLC*TFLHKA Trigger: GGCTTTGTGAAGAAAAGTCAAGCAAAGTGGATTCAC...CTCCGTGAAGGCTTCAACCTGGCAGCATCTACAAATATAAAACTGAACACAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000131166.9 ENSMUST00000146417.9 ENSMUST00000176621.8 |
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| CDS-3UTR CAA 90 bp | AATATACAAAATGTATTATTTTGTGCACCAGGTGTGTTGGTGCAGAGCTGCAACGTGAATCCACTTTGCTaGACTTTTCTTCACAAAGCC | + |
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Preference number: 5 (lower is better) Translates to: NIQNVLFCAPGVLVQSCNVNPLC*TFLHKA Trigger: GGCTTTGTGAAGAAAAGTCAAGCAAAGTGGATTCAC...GTTGCAGCTCTGCACCAACACACCTGGTGCACAAAATAATACATTTTGTATATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000131166.9 |
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| CDS-3UTR CAA 90 bp | TTCACGGAGGGCACTGCTATATTCTACTTATTAATTAAACTAATGGGGCAGTATGTGAATCCACTTTGCTaGACTTTTCTTCACAAAGCC | + |
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Preference number: 5 (lower is better) Translates to: FTEGTAIFYLLIKLMGQYVNPLC*TFLHKA Trigger: GGCTTTGTGAAGAAAAGTCAAGCAAAGTGGATTCAC...ATACTGCCCCATTAGTTTAATTAATAAGTAGAATATAGCAGTGCCCTCCGTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000082382.8 ENSMUST00000131166.9 ENSMUST00000146417.9 ENSMUST00000176621.8 |
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| CDS CCA 72 bp | GTCCCTCGCAGGCCTGCAAGCAGCTCCCCCTTTGCGTaGCTTCGGCTATGCAGGATGGAGAGAGACATCGAG | + |
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Preference number: 6 (lower is better) Translates to: VPRRPASSSPFA*LRLCRMERDIE Trigger: CTCGATGTCTCTCTCCATCCTGCATAGCCGAAGCCACGCAAAGGGGGAGCTGCTTGCAGGCCTGCGAGGGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000175974.2 |
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| CDS CAA 72 bp | CTGCTGTCCCTCGCAGGCCTGCAAGCAGCTCCCCCTTaGCGTGGCTTCGGCTATGCAGGATGGAGAGAGACA | + |
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Preference number: 6 (lower is better) Translates to: LLSLAGLQAAPP*RGFGYAGWRET Trigger: TGTCTCTCTCCATCCTGCATAGCCGAAGCCACGCAAAGGGGGAGCTGCTTGCAGGCCTGCGAGGGACAGCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000175974.2 |
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| CDS GCA 72 bp | TGCTGTCCCTCGCAGGCCTGCAAGCAGCTCCCCCTTTaGGTGGCTTCGGCTATGCAGGATGGAGAGAGACAT | + |
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Preference number: 6 (lower is better) Translates to: CCPSQACKQLPL*VASAMQDGERH Trigger: ATGTCTCTCTCCATCCTGCATAGCCGAAGCCACGCAAAGGGGGAGCTGCTTGCAGGCCTGCGAGGGACAGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000175974.2 |
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| CDS TCA 72 bp | CAGGCTCCGTACCTCATCTTTACCCGCTTCGGCTTCTaGGGATTAAGGTCCTCGGCCCAGTGGCAGAAGTCG | + |
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Preference number: 6 (lower is better) Translates to: QAPYLIFTRFGF*GLRSSAQWQKS Trigger: CGACTTCTGCCACTGGGCCGAGGACCTTAATCCTCAGAAGCCGAAGCGGGTAAAGATGAGGTACGGAGCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082382.8 |
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| CDS GCA 72 bp | AATGAAGTCCTTAAAGGCTGCTGTCCCTCGCAGGCCTaGAAGCAGCTCCCCCTTTGCGTGGCTTCGGCTATG | + |
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Preference number: 6 (lower is better) Translates to: NEVLKGCCPSQA*KQLPLCVASAM Trigger: CATAGCCGAAGCCACGCAAAGGGGGAGCTGCTTGCAGGCCTGCGAGGGACAGCAGCCTTTAAGGACTTCATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000175974.2 |
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| CDS GCA 72 bp | AATGAAGTCCTTAAAGGCTGCTGTCCCTCGCAGGCCTaGAAGCAGCTCCCCCTGCTCCTGAAGCTGCTCTTT | + |
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Preference number: 6 (lower is better) Translates to: NEVLKGCCPSQA*KQLPLLLKLLF Trigger: AAAGAGCAGCTTCAGGAGCAGGGGGAGCTGCTTGCAGGCCTGCGAGGGACAGCAGCCTTTAAGGACTTCATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000082382.8 ENSMUST00000131166.9 ENSMUST00000146417.9 |
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| CDS CCA 72 bp | TCCTCAATGGCAGAGCTTCCAAGGTCCTCGGCCCAGTaGCAGAAGTCGGTGACTCCTCTGTGTACGTCATCA | + |
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Preference number: 6 (lower is better) Translates to: SSMAELPRSSAQ*QKSVTPLCTSS Trigger: TGATGACGTACACAGAGGAGTCACCGACTTCTGCCACTGGGCCGAGGACCTTGGAAGCTCTGCCATTGAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131166.9 ENSMUST00000146417.9 |
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| CDS GCA 72 bp | GTGCTGAGCCGCCTCAGCTTCCACATCCTCCAGGAATaGCTTCCCAGCTTTCGAAAGCTTAGACAACAGCGT | + |
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Preference number: 6 (lower is better) Translates to: VLSRLSFHILQE*LPSFRKLRQQR Trigger: ACGCTGTTGTCTAAGCTTTCGAAAGCTGGGAAGGCATTCCTGGAGGATGTGGAAGCTGAGGCGGCTCAGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146417.9 |
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| CDS CCA 72 bp | TTCACAAACACCCAGTGCCGGCTGTTCAAGAAGCCCTaGCATGTCAGCCGGTTCCGCCTTATGAAACGCTTG | + |
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Preference number: 6 (lower is better) Translates to: FTNTQCRLFKKP*HVSRFRLMKRL Trigger: CAAGCGTTTCATAAGGCGGAACCGGCTGACATGCCAGGGCTTCTTGAACAGCCGGCACTGGGTGTTTGTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146417.9 |
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| CDS CAA 90 bp | TGCCCACAGTGTTCTCGCAGGGAAGGTGGTCTATTGATGAAGAGTTaGTCCTGGTTCAGCCTCAGCCTGAGAAGCGCATCACAGCTGCGT | + |
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Preference number: 6 (lower is better) Translates to: CPQCSRREGGLLMKS*SWFSLSLRSASQLR Trigger: ACGCAGCTGTGATGCGCTTCTCAGGCTGAGGCTGAACCAGGACAAACTCTTCATCAATAGACCACCTTCCCTGCGAGAACACTGTGGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131166.9 ENSMUST00000146417.9 |
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| CDS CAA 90 bp | GGTTCACTCCAGTGCCCACAGTGTTCTCGCAGGGAAGGTGGTCTATaGATGAAGAGTTTGTCCTGGTTCAGCCTCAGCCTGAGAAGCGCA | + |
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Preference number: 6 (lower is better) Translates to: GSLQCPQCSRREGGL*MKSLSWFSLSLRSA Trigger: TGCGCTTCTCAGGCTGAGGCTGAACCAGGACAAACTCTTCATCAATAGACCACCTTCCCTGCGAGAACACTGTGGGCACTGGAGTGAACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131166.9 ENSMUST00000146417.9 |
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| CDS GCA 72 bp | TGGCCTGAACGTGAGATCAGCGTCTTCTTAGGCCTTTaGGTGGCTTCGGCTATGCAGGATGGAGAGAGACAT | + |
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Preference number: 6 (lower is better) Translates to: WPEREISVFLGL*VASAMQDGERH Trigger: ATGTCTCTCTCCATCCTGCATAGCCGAAGCCACGCAAAGGCCTAAGAAGACGCTGATCTCACGTTCAGGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000082382.8 ENSMUST00000131166.9 ENSMUST00000176448.8 ENSMUST00000176621.8 |
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| CDS CCA 72 bp | CGCAGGGAAGGTGGTCTATTGATGAAGAGTTTGTCCTaGTTCAGCCTCAGCCTGAGAAGCGCATCACAGCTG | + |
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Preference number: 6 (lower is better) Translates to: RREGGLLMKSLS*FSLSLRSASQL Trigger: CAGCTGTGATGCGCTTCTCAGGCTGAGGCTGAACCAGGACAAACTCTTCATCAATAGACCACCTTCCCTGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131166.9 ENSMUST00000146417.9 |
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| CDS GCA 72 bp | TCTTTCCTGAAGTTATCCTCTTTCACAAACACCCAGTaGCGGCTGTTCAAGAAGCCCTGGCATGTCAGCCGG | + |
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Preference number: 6 (lower is better) Translates to: SFLKLSSFTNTQ*RLFKKPWHVSR Trigger: CCGGCTGACATGCCAGGGCTTCTTGAACAGCCGGCACTGGGTGTTTGTGAAAGAGGATAACTTCAGGAAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146417.9 |
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| CDS CAA 90 bp | GTTCTTGGGAAGAGCGTTTTCCTACAAGCTCTGTGGGTTCCTTCATaGGCTTCCTGGTATCCTGGCAATAAGCCCACACATCCTCCAGCT | + |
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Preference number: 6 (lower is better) Translates to: VLGKSVFLQALWVPS*ASWYPGNKPTHPPA Trigger: AGCTGGAGGATGTGTGGGCTTATTGCCAGGATACCAGGAAGCCAATGAAGGAACCCACAGAGCTTGTAGGAAAACGCTCTTCCCAAGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146417.9 |
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| CDS TCA 72 bp | ATCGAGGCAGACAATCACATGCCAGGTGCTCACGGATaGTGCAAAGAAAATGTAAGGTGGGAAGCGGCTGGA | + |
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Preference number: 6 (lower is better) Translates to: IEADNHMPGAHG*CKENVRWEAAG Trigger: TCCAGCCGCTTCCCACCTTACATTTTCTTTGCATCATCCGTGAGCACCTGGCATGTGATTGTCTGCCTCGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000082382.8 ENSMUST00000131166.9 ENSMUST00000175974.2 ENSMUST00000176448.8 ENSMUST00000176621.8 |
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| CDS CCA 72 bp | TTCACTCCAGTGCCCACAGTGTTCTCGCAGGGAAGGTaGTCTATTGATGAAGAGTTTGTCCTGGTTCAGCCT | + |
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Preference number: 6 (lower is better) Translates to: FTPVPTVFSQGR*SIDEEFVLVQP Trigger: AGGCTGAACCAGGACAAACTCTTCATCAATAGACCACCTTCCCTGCGAGAACACTGTGGGCACTGGAGTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131166.9 ENSMUST00000146417.9 |
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| CDS CCA 72 bp | GCATATATCTTCTCAAGGAAAAGGTCCTCGGCCCAGTaGCAGAAGTCGGTGACTCCTCTGTGTACGTCATCA | + |
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Preference number: 6 (lower is better) Translates to: AYIFSRKRSSAQ*QKSVTPLCTSS Trigger: TGATGACGTACACAGAGGAGTCACCGACTTCTGCCACTGGGCCGAGGACCTTTTCCTTGAGAAGATATATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176621.8 |
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| CDS CAA 72 bp | TGTTCTCGCAGGGAAGGTGGTCTATTGATGAAGAGTTaGTCCTGGTTCAGCCTCAGCCTGAGAAGCGCATCA | + |
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Preference number: 6 (lower is better) Translates to: CSRREGGLLMKS*SWFSLSLRSAS Trigger: TGATGCGCTTCTCAGGCTGAGGCTGAACCAGGACAAACTCTTCATCAATAGACCACCTTCCCTGCGAGAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131166.9 ENSMUST00000146417.9 |
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| CDS GCA 72 bp | GGAGAGAGACATCGAGGCAGACAATCACATGCCAGGTaGTCACGGATGATGCAAAGAAAATGTAAGGTGGGA | + |
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Preference number: 6 (lower is better) Translates to: GERHRGRQSHAR*SRMMQRKCKVG Trigger: TCCCACCTTACATTTTCTTTGCATCATCCGTGAGCACCTGGCATGTGATTGTCTGCCTCGATGTCTCTCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000082382.8 ENSMUST00000131166.9 ENSMUST00000175974.2 ENSMUST00000176448.8 ENSMUST00000176621.8 |
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| CDS CCA 72 bp | GAATCCACTTTGCTTGACTTTTCTTCACAAAGCCACTaGCCTGAACGTGAGATCAGCGTCTTCTTAGGCCTT | + |
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Preference number: 6 (lower is better) Translates to: ESTLLDFSSQSH*PEREISVFLGL Trigger: AAGGCCTAAGAAGACGCTGATCTCACGTTCAGGCCAGTGGCTTTGTGAAGAAAAGTCAAGCAAAGTGGATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000082382.8 ENSMUST00000131166.9 ENSMUST00000176448.8 ENSMUST00000176621.8 |
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