Pregenerated sensors for FAM43B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000078235Ensembl transcript IDs: ENSMUST00000105032.4
Found 66 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACCCCGGTCTCCTTGTTAGTACCTCCTCCTCCCTCAGCCTGCATGTaGGTCCAGCTGTGGTCGGGACCTGCTTGTTCTGAAAGCCTTGGC | + |
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Preference number: 1 (lower is better) Translates to: TPVSLLVPPPPSACM*VQLWSGPACSESLG Trigger: GCCAAGGCTTTCAGAACAAGCAGGTCCCGACCACAGCTGGACTCACATGCAGGCTGAGGGAGGAGGAGGTACTAACAAGGAGACCGGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105032.4 |
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| 3UTR GCA 90 bp | GACATGGGTCCTTACCTCCTTTGGAGGTTCCATCTTGGTCCAGGATaGAGGGTACTTAGGGTAGACCAGTTCTCTGTCTGCAGAGAGGGG | + |
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Preference number: 1 (lower is better) Translates to: DMGPYLLWRFHLGPG*RVLRVDQFSVCREG Trigger: CCCCTCTCTGCAGACAGAGAACTGGTCTACCCTAAGTACCCTGCATCCTGGACCAAGATGGAACCTCCAAAGGAGGTAAGGACCCATGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105032.4 |
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| 3UTR CCA 90 bp | TGGTCGGGACCTGCTTGTTCTGAAAGCCTTGGCTTGTCTGGGACATaGGTCCTTACCTCCTTTGGAGGTTCCATCTTGGTCCAGGATGCA | + |
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Preference number: 1 (lower is better) Translates to: WSGPACSESLGLSGT*VLTSFGGSILVQDA Trigger: TGCATCCTGGACCAAGATGGAACCTCCAAAGGAGGTAAGGACCCATGTCCCAGACAAGCCAAGGCTTTCAGAACAAGCAGGTCCCGACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105032.4 |
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| 3UTR TCA 90 bp | GGGCTGGCCTCAGTTCTCCCCAACCAACCACCACACTTCCTTATCTaGAATCTCTCAAGGGTGGTTCTTATCATAAGGAATAAGAGACCA | + |
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Preference number: 1 (lower is better) Translates to: GLASVLPNQPPHFLI*NLSRVVLIIRNKRP Trigger: TGGTCTCTTATTCCTTATGATAAGAACCACCCTTGAGAGATTTCAGATAAGGAAGTGTGGTGGTTGGTTGGGGAGAACTGAGGCCAGCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105032.4 |
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| 3UTR-3UTR GCA 90 bp | TTGTCCCTGTGTGTACGGGAGCCCTCCGTGGGGCTGGCCTCAGTTCTCCCCAACAGTGACCGCGAGGGCTaGAGGCCAGGGACCAGGGGG | + |
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Preference number: 2 (lower is better) Translates to: LSLCVREPSVGLASVLPNSDREG*RPGTRG Trigger: CCCCCTGGTCCCTGGCCTGCAGCCCTCGCGGTCACT...GTTGGGGAGAACTGAGGCCAGCCCCACGGAGGGCTCCCGTACACACAGGGACAA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105032.4 |
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| 3UTR-3UTR CCA 90 bp | AGCCCTCCGTGGGGCTGGCCTCAGTTCTCCCCAACCAACCACCACACTTCCTTATCCAGGTCAGTCTCCTaGGCCGGGTCTAGGGCCCCG | + |
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Preference number: 2 (lower is better) Translates to: SPPWGWPQFSPTNHHTSLSRSVS*AGSRAP Trigger: CGGGGCCCTAGACCCGGCCCAGGAGACTGACCTGGA...TAAGGAAGTGTGGTGGTTGGTTGGGGAGAACTGAGGCCAGCCCCACGGAGGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000105032.4 |
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| 3UTR-3UTR CCA 90 bp | GGGCAGCCAAGGCAGAGGCTTGGAGAGCTGCCTAGCAGGGCTGTTGCCTGTCGCAGGTTGGTTCATCTGTaGGCAGAGACTTGGCATATA | + |
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Preference number: 2 (lower is better) Translates to: GQPRQRLGELPSRAVACRRLVHL*AETWHI Trigger: TATATGCCAAGTCTCTGCCCACAGATGAACCAACCT...GCGACAGGCAACAGCCCTGCTAGGCAGCTCTCCAAGCCTCTGCCTTGGCTGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105032.4 |
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| 3UTR-3UTR GCA 90 bp | AGGGCTCACCCCGGTCTCCTTGTTAGTACCTCCTCCTCCCTCAGCCTGCATGTGCATCTTGGTCCAGGATaGAGGGTACTTAGGGTAGAC | + |
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Preference number: 2 (lower is better) Translates to: RAHPGLLVSTSSSLSLHVHLGPG*RVLRVD Trigger: GTCTACCCTAAGTACCCTGCATCCTGGACCAAGATG...CACATGCAGGCTGAGGGAGGAGGAGGTACTAACAAGGAGACCGGGGTGAGCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105032.4 |
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| 3UTR CAA 90 bp | GCATGTGAGTCCAGCTGTGGTCGGGACCTGCTTGTTCTGAAAGCCTaGGCTTGTCTGGGACATGGGTCCTTACCTCCTTTGGAGGTTCCA | + |
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Preference number: 2 (lower is better) Translates to: ACESSCGRDLLVLKA*ACLGHGSLPPLEVP Trigger: TGGAACCTCCAAAGGAGGTAAGGACCCATGTCCCAGACAAGCCAAGGCTTTCAGAACAAGCAGGTCCCGACCACAGCTGGACTCACATGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105032.4 |
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| 3UTR CCA 72 bp | GCGGGCAGGACCGAATTGAACTCCAGGTCAGTCTCCTaGGCCGGGTCTAGGGCCCCGAGTCCTAGCCCTGCG | + |
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Preference number: 3 (lower is better) Translates to: AGRTELNSRSVS*AGSRAPSPSPA Trigger: CGCAGGGCTAGGACTCGGGGCCCTAGACCCGGCCCAGGAGACTGACCTGGAGTTCAATTCGGTCCTGCCCGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105032.4 |
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| 3UTR CCA 72 bp | AATTGTCCCTGTGTGTACGGGAGCCCTCCGTGGGGCTaGCCTCAGTTCTCCCCAACCAACCACCACACTTCC | + |
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Preference number: 3 (lower is better) Translates to: NCPCVYGSPPWG*PQFSPTNHHTS Trigger: GGAAGTGTGGTGGTTGGTTGGGGAGAACTGAGGCCAGCCCCACGGAGGGCTCCCGTACACACAGGGACAATT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105032.4 |
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| 3UTR TCA 72 bp | CATGTGAGTCCAGCTGTGGTCGGGACCTGCTTGTTCTaGAAGCCTTGGCTTGTCTGGGACATGGGTCCTTAC | + |
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Preference number: 3 (lower is better) Translates to: HVSPAVVGTCLF*KPWLVWDMGPY Trigger: GTAAGGACCCATGTCCCAGACAAGCCAAGGCTTTCAGAACAAGCAGGTCCCGACCACAGCTGGACTCACATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105032.4 |
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| 3UTR TCA 72 bp | TCCTTGTTAGTACCTCCTCCTCCCTCAGCCTGCATGTaGGTCCAGCTGTGGTCGGGACCTGCTTGTTCTGAA | + |
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Preference number: 3 (lower is better) Translates to: SLLVPPPPSACM*VQLWSGPACSE Trigger: TTCAGAACAAGCAGGTCCCGACCACAGCTGGACTCACATGCAGGCTGAGGGAGGAGGAGGTACTAACAAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105032.4 |
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| 3UTR CCA 72 bp | CCTTGGCTTGTCTGGGACATGGGTCCTTACCTCCTTTaGAGGTTCCATCTTGGTCCAGGATGCAGGGTACTT | + |
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Preference number: 3 (lower is better) Translates to: PWLVWDMGPYLL*RFHLGPGCRVL Trigger: AAGTACCCTGCATCCTGGACCAAGATGGAACCTCCAAAGGAGGTAAGGACCCATGTCCCAGACAAGCCAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105032.4 |
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| 3UTR GCA 72 bp | CCTTACCTCCTTTGGAGGTTCCATCTTGGTCCAGGATaGAGGGTACTTAGGGTAGACCAGTTCTCTGTCTGC | + |
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Preference number: 3 (lower is better) Translates to: PYLLWRFHLGPG*RVLRVDQFSVC Trigger: GCAGACAGAGAACTGGTCTACCCTAAGTACCCTGCATCCTGGACCAAGATGGAACCTCCAAAGGAGGTAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105032.4 |
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| 3UTR CCA 72 bp | CCTGCTTGTTCTGAAAGCCTTGGCTTGTCTGGGACATaGGTCCTTACCTCCTTTGGAGGTTCCATCTTGGTC | + |
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Preference number: 3 (lower is better) Translates to: PACSESLGLSGT*VLTSFGGSILV Trigger: GACCAAGATGGAACCTCCAAAGGAGGTAAGGACCCATGTCCCAGACAAGCCAAGGCTTTCAGAACAAGCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105032.4 |
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| CDS-3UTR GCA 90 bp | GGGCAGCCAAGGCAGAGGCTTGGAGAGCTGCCTAGCAGGGCTGTTGCCTGTCGCTTCCAGCGGCGGGGCTaGGCTGGTGGCGGAGGTGCC | + |
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Preference number: 4 (lower is better) Translates to: GQPRQRLGELPSRAVACRFQRRG*AGGGGA Trigger: GGCACCTCCGCCACCAGCGCAGCCCCGCCGCTGGAA...GCGACAGGCAACAGCCCTGCTAGGCAGCTCTCCAAGCCTCTGCCTTGGCTGCCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105032.4 |
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| CDS-3UTR GCA 90 bp | CTGGGCAGGGCTCACCCCGGTCTCCTTGTTAGTACCTCCTCCTCCCTCAGCCTGCCCGCACGGAGATGCTaGTGGCGCACGTGGCGCGCA | + |
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Preference number: 4 (lower is better) Translates to: LGRAHPGLLVSTSSSLSLPARRC*WRTWRA Trigger: TGCGCGCCACGTGCGCCAGCAGCATCTCCGTGCGGG...CAGGCTGAGGGAGGAGGAGGTACTAACAAGGAGACCGGGGTGAGCCCTGCCCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105032.4 |
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| CDS-3UTR TCA 90 bp | CTGGGCAGGGCTCACCCCGGTCTCCTTGTTAGTACCTCCTCCTCCCTCAGCCTGCCTTGGCATGCAGGGTaGCGGCGTTGCCCAGGTACC | + |
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Preference number: 4 (lower is better) Translates to: LGRAHPGLLVSTSSSLSLPWHAG*RRCPGT Trigger: GGTACCTGGGCAACGCCGTCACCCTGCATGCCAAGG...CAGGCTGAGGGAGGAGGAGGTACTAACAAGGAGACCGGGGTGAGCCCTGCCCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105032.4 |
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| CDS-3UTR GCA 90 bp | AGTAATTGTCCCTGTGTGTACGGGAGCCCTCCGTGGGGCTGGCCTCAGTTCTCCCCGTCGCCCTTGGCATaGAGGGTGACGGCGTTGCCC | + |
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Preference number: 4 (lower is better) Translates to: SNCPCVYGSPPWGWPQFSPSPLA*RVTALP Trigger: GGGCAACGCCGTCACCCTGCATGCCAAGGGCGACGG...GGAGAACTGAGGCCAGCCCCACGGAGGGCTCCCGTACACACAGGGACAATTACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105032.4 |
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| CDS-3UTR TCA 90 bp | GTAATTGTCCCTGTGTGTACGGGAGCCCTCCGTGGGGCTGGCCTCAGTTCTCCCAAGCGCACTTGGCGTTaGGCAGGCGGCGCAATGGAG | + |
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Preference number: 4 (lower is better) Translates to: VIVPVCTGALRGAGLSSPKRTWR*AGGAME Trigger: CTCCATTGCGCCGCCTGCTCAACGCCAAGTGCGCTT...GGGAGAACTGAGGCCAGCCCCACGGAGGGCTCCCGTACACACAGGGACAATTAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105032.4 |
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| CDS-3UTR CCA 90 bp | TTGTCCCTGTGTGTACGGGAGCCCTCCGTGGGGCTGGCCTCAGTTCTCCCCAACTTAAGCTCCACTTTCTaGCGCCGGCTGCGGAACACG | + |
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Preference number: 4 (lower is better) Translates to: LSLCVREPSVGLASVLPNLSSTF*RRLRNT Trigger: CGTGTTCCGCAGCCGGCGCCAGAAAGTGGAGCTTAA...GTTGGGGAGAACTGAGGCCAGCCCCACGGAGGGCTCCCGTACACACAGGGACAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105032.4 |
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| CDS-3UTR CCA 90 bp | AATTCCACAGTGGTAGGCCAGGGAAACTCCCAGTGTGGGGACGTATGGACTCCTTGCTGCTGGCGCACGTaGCGCGCATCGCTCTGGCGC | + |
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Preference number: 4 (lower is better) Translates to: NSTVVGQGNSQCGDVWTPCCWRT*RASLWR Trigger: GCGCCAGAGCGATGCGCGCCACGTGCGCCAGCAGCA...AGGAGTCCATACGTCCCCACACTGGGAGTTTCCCTGGCCTACCACTGTGGAATT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105032.4 |
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| CDS-3UTR GCA 90 bp | AGCCCTCCGTGGGGCTGGCCTCAGTTCTCCCCAACCAACCACCACACTTCCTTATCAGGCTCTTCGCCTTaGGCTTGGCCTCGTCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: SPPWGWPQFSPTNHHTSLSGSSP*AWPRPP Trigger: TGGAGGACGAGGCCAAGCGCAAGGCGAAGAGCCTGA...TAAGGAAGTGTGGTGGTTGGTTGGGGAGAACTGAGGCCAGCCCCACGGAGGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105032.4 |
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| CDS-3UTR GCA 90 bp | GCTTGTCTGGGACATGGGTCCTTACCTCCTTTGGAGGTTCCATCTTGGTCCAGGAGGGAGCGCGCCTTGTaGGCCCGCGCCAGCAACACA | + |
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Preference number: 4 (lower is better) Translates to: ACLGHGSLPPLEVPSWSRRERAL*ARASNT Trigger: TGTGTTGCTGGCGCGGGCGCACAAGGCGCGCTCCCT...CCTGGACCAAGATGGAACCTCCAAAGGAGGTAAGGACCCATGTCCCAGACAAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105032.4 |
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| CDS-3UTR TCA 90 bp | CTTTCTCCTAAGAGGCCGTTTTGGGACAAGAGCAGGTTGGTTCATCTGTGGGCACCGCCGCGCAGTAGGTaGTGCGCGGCAGCAGGTAGG | + |
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Preference number: 4 (lower is better) Translates to: LSPKRPFWDKSRLVHLWAPPRSR*CAAAGR Trigger: CCTACCTGCTGCCGCGCATCACCTACTGCGCGGCGG...TGCCCACAGATGAACCAACCTGCTCTTGTCCCAAAACGGCCTCTTAGGAGAAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105032.4 |
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| CDS-3UTR GCA 90 bp | GCTTGTCTGGGACATGGGTCCTTACCTCCTTTGGAGGTTCCATCTTGGTCCAGGTCGGCTGCATGCGGATaGCGTGCGGACCCAGGGTCA | + |
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Preference number: 4 (lower is better) Translates to: ACLGHGSLPPLEVPSWSRSAACG*RADPGS Trigger: TGACCCTGGGTCCGCACGGCATCCGCATGCAGCCGA...CCTGGACCAAGATGGAACCTCCAAAGGAGGTAAGGACCCATGTCCCAGACAAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105032.4 |
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| CDS-3UTR GCA 90 bp | GACAGGCCCATCTCAGTCTCCTTTAGAGGTGTAGTAATTGTCCCTGTGTGTACGGGGCACCCCGCAGGCTaGACGTCCTCAGCTCCCGGG | + |
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Preference number: 4 (lower is better) Translates to: DRPISVSFRGVVIVPVCTGHPAG*TSSAPG Trigger: CCCGGGAGCTGAGGACGTGCAGCCTGCGGGGTGCCC...CGTACACACAGGGACAATTACTACACCTCTAAAGGAGACTGAGATGGGCCTGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105032.4 |
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| CDS-3UTR CCA 90 bp | CTTGTTCTGAAAGCCTTGGCTTGTCTGGGACATGGGTCCTTACCTCCTTTGGAGGAGCAGGCGGCGCAATaGAGCCCGGGGTACCGAGGC | + |
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Preference number: 4 (lower is better) Translates to: LVLKALACLGHGSLPPLEEQAAQ*SPGYRG Trigger: GCCTCGGTACCCCGGGCTCCATTGCGCCGCCTGCTC...CTCCAAAGGAGGTAAGGACCCATGTCCCAGACAAGCCAAGGCTTTCAGAACAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105032.4 |
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| CDS-3UTR TCA 90 bp | TTTTGGGACAAGAGCAGGTTGGTTCATCTGTGGGCAGAGACTTGGCATATAGCGGGCGGTAGACCCAGGTaGAGACTCGCGGGTGGCGCC | + |
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Preference number: 4 (lower is better) Translates to: FWDKSRLVHLWAETWHIAGGRPR*RLAGGA Trigger: GGCGCCACCCGCGAGTCTTCACCTGGGTCTACCGCC...CGCTATATGCCAAGTCTCTGCCCACAGATGAACCAACCTGCTCTTGTCCCAAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105032.4 |
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| CDS-3UTR GCA 90 bp | CTTGTTCTGAAAGCCTTGGCTTGTCTGGGACATGGGTCCTTACCTCCTTTGGAGCTTTCTGGCGCCGGCTaGGGAACACGCGGCCCAGAC | + |
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Preference number: 4 (lower is better) Translates to: LVLKALACLGHGSLPPLELSGAG*GTRGPD Trigger: GTCTGGGCCGCGTGTTCCGCAGCCGGCGCCAGAAAG...CTCCAAAGGAGGTAAGGACCCATGTCCCAGACAAGCCAAGGCTTTCAGAACAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105032.4 |
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| CDS-3UTR GCA 90 bp | CCTTGGCTTGTCTGGGACATGGGTCCTTACCTCCTTTGGAGGTTCCATCTTGGTGTTCGCTCGGCTGCATaGGGATGCCGTGCGGACCCA | + |
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Preference number: 4 (lower is better) Translates to: PWLVWDMGPYLLWRFHLGVRSAA*GCRADP Trigger: TGGGTCCGCACGGCATCCGCATGCAGCCGAGCGAAC...ACCAAGATGGAACCTCCAAAGGAGGTAAGGACCCATGTCCCAGACAAGCCAAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105032.4 |
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| CDS-3UTR GCA 90 bp | CTTGTTCTGAAAGCCTTGGCTTGTCTGGGACATGGGTCCTTACCTCCTTTGGAGAGCGCGCCCAAATCCTaGCCACAGCGTCGTCGGTGC | + |
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Preference number: 4 (lower is better) Translates to: LVLKALACLGHGSLPPLESAPKS*PQRRRC Trigger: GCACCGACGACGCTGTGGGCAGGATTTGGGCGCGCT...CTCCAAAGGAGGTAAGGACCCATGTCCCAGACAAGCCAAGGCTTTCAGAACAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105032.4 |
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| CDS-3UTR GCA 90 bp | AATTCCACAGTGGTAGGCCAGGGAAACTCCCAGTGTGGGGACGTATGGACTCCTTGCATGCGGATGCCGTaGGGACCCAGGGTCAGTTTC | + |
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Preference number: 4 (lower is better) Translates to: NSTVVGQGNSQCGDVWTPCMRMP*GPRVSF Trigger: GAAACTGACCCTGGGTCCGCACGGCATCCGCATGCA...AGGAGTCCATACGTCCCCACACTGGGAGTTTCCCTGGCCTACCACTGTGGAATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105032.4 |
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| CDS-3UTR GCA 90 bp | CCTTGGCTTGTCTGGGACATGGGTCCTTACCTCCTTTGGAGGTTCCATCTTGGTGCATCGCTCTGGCGCTaGAGCCGCTTGAAGTCGCTG | + |
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Preference number: 4 (lower is better) Translates to: PWLVWDMGPYLLWRFHLGASLWR*SRLKSL Trigger: CAGCGACTTCAAGCGGCTGCAGCGCCAGAGCGATGC...ACCAAGATGGAACCTCCAAAGGAGGTAAGGACCCATGTCCCAGACAAGCCAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105032.4 |
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| CDS-3UTR GCA 90 bp | GACAGGCCCATCTCAGTCTCCTTTAGAGGTGTAGTAATTGTCCCTGTGTGTACGCCACAGCGTCGTCGGTaGAGCCGTCGCCCTTGGCAT | + |
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Preference number: 4 (lower is better) Translates to: DRPISVSFRGVVIVPVCTPQRRR*SRRPWH Trigger: ATGCCAAGGGCGACGGCTGCACCGACGACGCTGTGG...CGTACACACAGGGACAATTACTACACCTCTAAAGGAGACTGAGATGGGCCTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105032.4 |
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| CDS-3UTR GCA 90 bp | TTTTGGGACAAGAGCAGGTTGGTTCATCTGTGGGCAGAGACTTGGCATATAGCGCTGCGTTCGCTCGGCTaGATGCGGATGCCGTGCGGA | + |
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Preference number: 4 (lower is better) Translates to: FWDKSRLVHLWAETWHIALRSLG*MRMPCG Trigger: TCCGCACGGCATCCGCATGCAGCCGAGCGAACGCAG...CGCTATATGCCAAGTCTCTGCCCACAGATGAACCAACCTGCTCTTGTCCCAAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105032.4 |
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| CDS-3UTR GCA 90 bp | TTTTGGGACAAGAGCAGGTTGGTTCATCTGTGGGCAGAGACTTGGCATATAGCGCACGGCCTTGTGGCGTaGCTGGTGGCGGTAGACCCA | + |
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Preference number: 4 (lower is better) Translates to: FWDKSRLVHLWAETWHIAHGLVA*LVAVDP Trigger: TGGGTCTACCGCCACCAGGCACGCCACAAGGCCGTG...CGCTATATGCCAAGTCTCTGCCCACAGATGAACCAACCTGCTCTTGTCCCAAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105032.4 |
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| CDS-3UTR CCA 90 bp | CTGCTTGTTCTGAAAGCCTTGGCTTGTCTGGGACATGGGTCCTTACCTCCTTTGAGGAGCGCAGGAAGCTaGAGAGCAGCGACGTGTAGG | + |
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Preference number: 4 (lower is better) Translates to: LLVLKALACLGHGSLPPLRSAGS*RAATCR Trigger: CCTACACGTCGCTGCTCTCCAGCTTCCTGCGCTCCT...CAAAGGAGGTAAGGACCCATGTCCCAGACAAGCCAAGGCTTTCAGAACAAGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105032.4 |
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| 3UTR CAA 72 bp | GCCTTGGCTTGTCTGGGACATGGGTCCTTACCTCCTTaGGAGGTTCCATCTTGGTCCAGGATGCAGGGTACT | + |
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Preference number: 4 (lower is better) Translates to: ALACLGHGSLPP*EVPSWSRMQGT Trigger: AGTACCCTGCATCCTGGACCAAGATGGAACCTCCAAAGGAGGTAAGGACCCATGTCCCAGACAAGCCAAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105032.4 |
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| 3UTR CAA 72 bp | TCCAGCTGTGGTCGGGACCTGCTTGTTCTGAAAGCCTaGGCTTGTCTGGGACATGGGTCCTTACCTCCTTTG | + |
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Preference number: 4 (lower is better) Translates to: SSCGRDLLVLKA*ACLGHGSLPPL Trigger: CAAAGGAGGTAAGGACCCATGTCCCAGACAAGCCAAGGCTTTCAGAACAAGCAGGTCCCGACCACAGCTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105032.4 |
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| CDS-3UTR CCA 90 bp | CTGCTTGTTCTGAAAGCCTTGGCTTGTCTGGGACATGGGTCCTTACCTCCTTTGTCTTCGCCTTGCGCTTaGCCTCGTCCTCCACTAGCA | + |
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Preference number: 4 (lower is better) Translates to: LLVLKALACLGHGSLPPLSSPCA*PRPPLA Trigger: TGCTAGTGGAGGACGAGGCCAAGCGCAAGGCGAAGA...CAAAGGAGGTAAGGACCCATGTCCCAGACAAGCCAAGGCTTTCAGAACAAGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105032.4 |
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| 3UTR CAA 72 bp | CTTTCTCCTAAGAGGCCGTTTTGGGACAAGAGCAGGTaGGTTCATCTGTGGGCAGAGACTTGGCATATAGCG | + |
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Preference number: 4 (lower is better) Translates to: LSPKRPFWDKSR*VHLWAETWHIA Trigger: CGCTATATGCCAAGTCTCTGCCCACAGATGAACCAACCTGCTCTTGTCCCAAAACGGCCTCTTAGGAGAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105032.4 |
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| CDS TCA 90 bp | CGCGACCGCGCTCGCCCGGCGGAGGCCGGTAAGCGCACTTGGCGTTaGGCAGGCGGCGCAATGGAGCCCGGGGTACCGAGGCGGCGGCGC | + |
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Preference number: 5 (lower is better) Translates to: RDRARPAEAGKRTWR*AGGAMEPGVPRRRR Trigger: GCGCCGCCGCCTCGGTACCCCGGGCTCCATTGCGCCGCCTGCTCAACGCCAAGTGCGCTTACCGGCCTCCGCCGGGCGAGCGCGGTCGCG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105032.4 |
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| CDS GCA 90 bp | CCCGAAGCCCCGGAGCTGCGTTCGCTCGGCTGCATGCGGATGCCGTaGGGACCCAGGGTCAGTTTCATCTTCGTGCCCCCTCCCGGCCCG | + |
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Preference number: 5 (lower is better) Translates to: PEAPELRSLGCMRMP*GPRVSFIFVPPPGP Trigger: CGGGCCGGGAGGGGGCACGAAGATGAAACTGACCCTGGGTCCGCACGGCATCCGCATGCAGCCGAGCGAACGCAGCTCCGGGGCTTCGGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105032.4 |
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| CDS CCA 90 bp | CCAGCGGCCAGTCCGGTAGCAGGTCCGGGCAGGAGCGCAGGAAGCTaGAGAGCAGCGACGTGTAGGCGAGCCCGGGGCTCAGGCTCTTCG | + |
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Preference number: 5 (lower is better) Translates to: PAASPVAGPGRSAGS*RAATCRRARGSGSS Trigger: CGAAGAGCCTGAGCCCCGGGCTCGCCTACACGTCGCTGCTCTCCAGCTTCCTGCGCTCCTGCCCGGACCTGCTACCGGACTGGCCGCTGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105032.4 |
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| CDS GCA 90 bp | GCACGGAGATGCTGCTGGCGCACGTGGCGCGCATCGCTCTGGCGCTaGAGCCGCTTGAAGTCGCTGAAGGCCGCCAGCGCAGTCTGGTGG | + |
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Preference number: 5 (lower is better) Translates to: ARRCCWRTWRASLWR*SRLKSLKAASAVWW Trigger: CCACCAGACTGCGCTGGCGGCCTTCAGCGACTTCAAGCGGCTGCAGCGCCAGAGCGATGCGCGCCACGTGCGCCAGCAGCATCTCCGTGC 70% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105032.4 |
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| CDS GCA 90 bp | GCTGCATGCGGATGCCGTGCGGACCCAGGGTCAGTTTCATCTTCGTaGCCCCTCCCGGCCCGCAGCGCGCCCAAATCCTGCCCACAGCGT | + |
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Preference number: 5 (lower is better) Translates to: AACGCRADPGSVSSS*PLPARSAPKSCPQR Trigger: ACGCTGTGGGCAGGATTTGGGCGCGCTGCGGGCCGGGAGGGGGCACGAAGATGAAACTGACCCTGGGTCCGCACGGCATCCGCATGCAGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105032.4 |
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| CDS-3UTR CAA 90 bp | AGTAATTGTCCCTGTGTGTACGGGAGCCCTCCGTGGGGCTGGCCTCAGTTCTCCGTGCAGCCGTCGCCCTaGGCATGCAGGGTGACGGCG | + |
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Preference number: 5 (lower is better) Translates to: SNCPCVYGSPPWGWPQFSVQPSP*ACRVTA Trigger: CGCCGTCACCCTGCATGCCAAGGGCGACGGCTGCAC...GGAGAACTGAGGCCAGCCCCACGGAGGGCTCCCGTACACACAGGGACAATTACT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105032.4 |
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| CDS-3UTR CAA 90 bp | CCTTGGCTTGTCTGGGACATGGGTCCTTACCTCCTTTGGAGGTTCCATCTTGGTGCCAGGGAGCGCGCCTaGTGCGCCCGCGCCAGCAAC | + |
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Preference number: 5 (lower is better) Translates to: PWLVWDMGPYLLWRFHLGARERA*CARASN Trigger: GTTGCTGGCGCGGGCGCACAAGGCGCGCTCCCTGGC...ACCAAGATGGAACCTCCAAAGGAGGTAAGGACCCATGTCCCAGACAAGCCAAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105032.4 |
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| CDS-3UTR CAA 90 bp | GTAATTGTCCCTGTGTGTACGGGAGCCCTCCGTGGGGCTGGCCTCAGTTCTCCCTCCACTAGCACGAATTaGTTCCGTCTCCAGGGCAGC | + |
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Preference number: 5 (lower is better) Translates to: VIVPVCTGALRGAGLSSPSTSTN*FRLQGS Trigger: GCTGCCCTGGAGACGGAACAAATTCGTGCTAGTGGA...GGGAGAACTGAGGCCAGCCCCACGGAGGGCTCCCGTACACACAGGGACAATTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105032.4 |
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| CDS-3UTR CAA 90 bp | AATTCCACAGTGGTAGGCCAGGGAAACTCCCAGTGTGGGGACGTATGGACTCCTCTCAGGCTCTTCGCCTaGCGCTTGGCCTCGTCCTCC | + |
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Preference number: 5 (lower is better) Translates to: NSTVVGQGNSQCGDVWTPLRLFA*RLASSS Trigger: GGAGGACGAGGCCAAGCGCAAGGCGAAGAGCCTGAG...AGGAGTCCATACGTCCCCACACTGGGAGTTTCCCTGGCCTACCACTGTGGAATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105032.4 |
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| CDS-3UTR CAA 90 bp | AATTCCACAGTGGTAGGCCAGGGAAACTCCCAGTGTGGGGACGTATGGACTCCTCTCTTCGCCTTGCGCTaGGCCTCGTCCTCCACTAGC | + |
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Preference number: 5 (lower is better) Translates to: NSTVVGQGNSQCGDVWTPLFALR*ASSSTS Trigger: GCTAGTGGAGGACGAGGCCAAGCGCAAGGCGAAGAG...AGGAGTCCATACGTCCCCACACTGGGAGTTTCCCTGGCCTACCACTGTGGAATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105032.4 |
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| CDS-3UTR CAA 90 bp | CTTGTTCTGAAAGCCTTGGCTTGTCTGGGACATGGGTCCTTACCTCCTTTGGAGTGGCGCTGCAGCCGCTaGAAGTCGCTGAAGGCCGCC | + |
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Preference number: 5 (lower is better) Translates to: LVLKALACLGHGSLPPLEWRCSR*KSLKAA Trigger: GGCGGCCTTCAGCGACTTCAAGCGGCTGCAGCGCCA...CTCCAAAGGAGGTAAGGACCCATGTCCCAGACAAGCCAAGGCTTTCAGAACAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105032.4 |
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| CDS-3UTR CAA 90 bp | CTGCTTGTTCTGAAAGCCTTGGCTTGTCTGGGACATGGGTCCTTACCTCCTTTGTGCAGGGTGACGGCGTaGCCCAGGTACCACACGGTG | + |
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Preference number: 5 (lower is better) Translates to: LLVLKALACLGHGSLPPLCRVTA*PRYHTV Trigger: CACCGTGTGGTACCTGGGCAACGCCGTCACCCTGCA...CAAAGGAGGTAAGGACCCATGTCCCAGACAAGCCAAGGCTTTCAGAACAAGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105032.4 |
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| CDS TCA 72 bp | GCTCGCCCGGCGGAGGCCGGTAAGCGCACTTGGCGTTaGGCAGGCGGCGCAATGGAGCCCGGGGTACCGAGG | + |
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Preference number: 6 (lower is better) Translates to: ARPAEAGKRTWR*AGGAMEPGVPR Trigger: CCTCGGTACCCCGGGCTCCATTGCGCCGCCTGCTCAACGCCAAGTGCGCTTACCGGCCTCCGCCGGGCGAGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105032.4 |
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| CDS TCA 72 bp | CGGCCTTGTGGCGTGCCTGGTGGCGGTAGACCCAGGTaGAGACTCGCGGGTGGCGCCCATCCGCCGCGCAGT | + |
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Preference number: 6 (lower is better) Translates to: RPCGVPGGGRPR*RLAGGAHPPRS Trigger: ACTGCGCGGCGGATGGGCGCCACCCGCGAGTCTTCACCTGGGTCTACCGCCACCAGGCACGCCACAAGGCCG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105032.4 |
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| CDS GCA 72 bp | TCCCGGGCCAGGCTGAGCACCTCGGGCCGTTCGCGCTaGAGGGCTCCTTCCTCGCTATCCCGGGTGTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: SRARLSTSGRSR*RAPSSLSRVSS Trigger: GGAGGACACCCGGGATAGCGAGGAAGGAGCCCTGCAGCGCGAACGGCCCGAGGTGCTCAGCCTGGCCCGGGA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105032.4 |
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| CDS CAA 90 bp | TGCTGCTGGCGCACGTGGCGCGCATCGCTCTGGCGCTGCAGCCGCTaGAAGTCGCTGAAGGCCGCCAGCGCAGTCTGGTGGAGCAGGCGG | + |
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Preference number: 6 (lower is better) Translates to: CCWRTWRASLWRCSR*KSLKAASAVWWSRR Trigger: CCGCCTGCTCCACCAGACTGCGCTGGCGGCCTTCAGCGACTTCAAGCGGCTGCAGCGCCAGAGCGATGCGCGCCACGTGCGCCAGCAGCA 71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105032.4 |
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| CDS GCA 72 bp | TGCTGCTGGCGCACGTGGCGCGCATCGCTCTGGCGCTaGAGCCGCTTGAAGTCGCTGAAGGCCGCCAGCGCA | + |
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Preference number: 6 (lower is better) Translates to: CCWRTWRASLWR*SRLKSLKAASA Trigger: TGCGCTGGCGGCCTTCAGCGACTTCAAGCGGCTGCAGCGCCAGAGCGATGCGCGCCACGTGCGCCAGCAGCA 71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105032.4 |
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| CDS CAA 72 bp | CGCACGTGGCGCGCATCGCTCTGGCGCTGCAGCCGCTaGAAGTCGCTGAAGGCCGCCAGCGCAGTCTGGTGG | + |
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Preference number: 6 (lower is better) Translates to: RTWRASLWRCSR*KSLKAASAVWW Trigger: CCACCAGACTGCGCTGGCGGCCTTCAGCGACTTCAAGCGGCTGCAGCGCCAGAGCGATGCGCGCCACGTGCG 71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105032.4 |
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| CDS CCA 72 bp | AGTCCGGTAGCAGGTCCGGGCAGGAGCGCAGGAAGCTaGAGAGCAGCGACGTGTAGGCGAGCCCGGGGCTCA | + |
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Preference number: 6 (lower is better) Translates to: SPVAGPGRSAGS*RAATCRRARGS Trigger: TGAGCCCCGGGCTCGCCTACACGTCGCTGCTCTCCAGCTTCCTGCGCTCCTGCCCGGACCTGCTACCGGACT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105032.4 |
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| CDS CCA 72 bp | TCCTCCTCCTCCGCATCCTCCTCCTCATCCTCCTCCTaGATGCTGCTGAGCCGCGGAGCTCCGCGACCGCGC | + |
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Preference number: 6 (lower is better) Translates to: SSSSASSSSSSS*MLLSRGAPRPR Trigger: GCGCGGTCGCGGAGCTCCGCGGCTCAGCAGCATCCAGGAGGAGGATGAGGAGGAGGATGCGGAGGAGGAGGA 69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105032.4 |
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| CDS GCA 72 bp | CCCCCGAAGCCCCGGAGCTGCGTTCGCTCGGCTGCATaGGGATGCCGTGCGGACCCAGGGTCAGTTTCATCT | + |
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Preference number: 6 (lower is better) Translates to: PPKPRSCVRSAA*GCRADPGSVSS Trigger: AGATGAAACTGACCCTGGGTCCGCACGGCATCCGCATGCAGCCGAGCGAACGCAGCTCCGGGGCTTCGGGGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105032.4 |
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| CDS GCA 72 bp | CCGGAGCTGCGTTCGCTCGGCTGCATGCGGATGCCGTaGGGACCCAGGGTCAGTTTCATCTTCGTGCCCCCT | + |
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Preference number: 6 (lower is better) Translates to: PELRSLGCMRMP*GPRVSFIFVPP Trigger: AGGGGGCACGAAGATGAAACTGACCCTGGGTCCGCACGGCATCCGCATGCAGCCGAGCGAACGCAGCTCCGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105032.4 |
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| CDS GCA 72 bp | AAGCCCCGGAGCTGCGTTCGCTCGGCTGCATGCGGATaGCGTGCGGACCCAGGGTCAGTTTCATCTTCGTGC | + |
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Preference number: 6 (lower is better) Translates to: KPRSCVRSAACG*RADPGSVSSSC Trigger: GCACGAAGATGAAACTGACCCTGGGTCCGCACGGCATCCGCATGCAGCCGAGCGAACGCAGCTCCGGGGCTT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105032.4 |
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