Pregenerated sensors for FAM43A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046546Ensembl transcript IDs: ENSMUST00000059078.4
Found 98 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCTCACAAACAGGAAACCGGCTGCTGGGCACCTCCAGCCCGCCCTTaGCCTTTTCCAACTTCAGCCAGCTCTCCCTCACCCACCTTTGTA | + |
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Preference number: 1 (lower is better) Translates to: PHKQETGCWAPPARP*PFPTSASSPSPTFV Trigger: TACAAAGGTGGGTGAGGGAGAGCTGGCTGAAGTTGGAAAAGGCCAAGGGCGGGCTGGAGGTGCCCAGCAGCCGGTTTCCTGTTTGTGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| 3UTR-3UTR TCA 90 bp | GCTGCCTCACAAACAGGAAACCGGCTGCTGGGCACCTCCAGCCCGCCCTTGGCCAACCTGAGCCACCTCTaGGCCAAAGCGCTGGGGCAA | + |
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Preference number: 2 (lower is better) Translates to: AASQTGNRLLGTSSPPLANLSHL*AKALGQ Trigger: TTGCCCCAGCGCTTTGGCTCAGAGGTGGCTCAGGTT...GGCCAAGGGCGGGCTGGAGGTGCCCAGCAGCCGGTTTCCTGTTTGTGAGGCAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| 3UTR-3UTR TCA 90 bp | GGCACCTCCAGCCCGCCCTTGGCCTTTTCCAACTTCAGCCAGCTCTCCCTCACCCCCCTGTTCACAACCTaGGCCACCTCTGAGCCAAAG | + |
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Preference number: 2 (lower is better) Translates to: GTSSPPLAFSNFSQLSLTPLFTT*ATSEPK Trigger: CTTTGGCTCAGAGGTGGCTCAGGTTGTGAACAGGGG...GGTGAGGGAGAGCTGGCTGAAGTTGGAAAAGGCCAAGGGCGGGCTGGAGGTGCC 62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| 3UTR-3UTR GCA 90 bp | GGGTCTGGAGAGGAAGTTAACCCCTCCTTCCCTAGCCCCAGCTGCCTCACAAACGGTCTGGGCTTCAAGTaGATCATTTTCCCTTTCCTG | + |
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Preference number: 2 (lower is better) Translates to: GSGEEVNPSFPSPSCLTNGLGFK*IIFPFL Trigger: CAGGAAAGGGAAAATGATGCACTTGAAGCCCAGACC...GTTTGTGAGGCAGCTGGGGCTAGGGAAGGAGGGGTTAACTTCCTCTCCAGACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| 3UTR-3UTR CCA 90 bp | CACCTCCAGCCCGCCCTTGGCCTTTTCCAACTTCAGCCAGCTCTCCCTCACCCATCATTTTCCCTTTCCTaGAGGTTAGGGGGAATAGAA | + |
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Preference number: 2 (lower is better) Translates to: HLQPALGLFQLQPALPHPSFSLS*RLGGIE Trigger: TTCTATTCCCCCTAACCTCCAGGAAAGGGAAAATGA...TGGGTGAGGGAGAGCTGGCTGAAGTTGGAAAAGGCCAAGGGCGGGCTGGAGGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| 3UTR-3UTR GCA 90 bp | GCAAACTTTCAAGAGTTTGAGTCTGAGGTAAACAGCCCAAGCTCCCCTATCCGATTCCCTAGCCCCAGCTaGCTCACAAACAGGAAACCG | + |
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Preference number: 2 (lower is better) Translates to: ANFQEFESEVNSPSSPIRFPSPS*LTNRKP Trigger: CGGTTTCCTGTTTGTGAGGCAGCTGGGGCTAGGGAA...TCGGATAGGGGAGCTTGGGCTGTTTACCTCAGACTCAAACTCTTGAAAGTTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| 3UTR-3UTR CCA 90 bp | AGTAGGAGCTTTGGGGCCAGAGGAAGGTGTGTATTTCTAAAGGAAAATTCCTTTCCTATCCGAAAGAACTaGGGGCAGGTAAAGTGGCAT | + |
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Preference number: 2 (lower is better) Translates to: SRSFGARGRCVFLKENSFPIRKN*GQVKWH Trigger: ATGCCACTTTACCTGCCCCCAGTTCTTTCGGATAGG...AAAGGAATTTTCCTTTAGAAATACACACCTTCCTCTGGCCCCAAAGCTCCTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| 3UTR GCA 72 bp | TCCCTCACCCACCTTTGTAGTGCTTCTCGCCCTCCCTaGCCCCCATCCCCCTGTTCACAACCTGAGCCACCT | + |
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Preference number: 3 (lower is better) Translates to: SLTHLCSASRPP*PPSPCSQPEPP Trigger: AGGTGGCTCAGGTTGTGAACAGGGGGATGGGGGGCAGGGAGGGCGAGAAGCACTACAAAGGTGGGTGAGGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| 3UTR-3UTR CAA 90 bp | GCAAACTTTCAAGAGTTTGAGTCTGAGGTAAACAGCCCAAGCTCCCCTATCCGAGCCACTATGTGTATGTaGGGAGGGGCGCACAGAGAA | + |
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Preference number: 3 (lower is better) Translates to: ANFQEFESEVNSPSSPIRATMCM*GGAHRE Trigger: TTCTCTGTGCGCCCCTCCCAACATACACATAGTGGC...TCGGATAGGGGAGCTTGGGCTGTTTACCTCAGACTCAAACTCTTGAAAGTTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| 3UTR-3UTR CAA 90 bp | GCAAACTTTCAAGAGTTTGAGTCTGAGGTAAACAGCCCAAGCTCCCCTATCCGAGGAATAGAACTACTGTaGGGGAGCCACTATGTGTAT | + |
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Preference number: 3 (lower is better) Translates to: ANFQEFESEVNSPSSPIRGIELL*GSHYVY Trigger: ATACACATAGTGGCTCCCCAACAGTAGTTCTATTCC...TCGGATAGGGGAGCTTGGGCTGTTTACCTCAGACTCAAACTCTTGAAAGTTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS-3UTR CCA 90 bp | GCTGCCTCACAAACAGGAAACCGGCTGCTGGGCACCTCCAGCCCGCCCTTGGCCGGCCTCCGCCCTCGATaGAGCTCTCGCTGCCTGTGC | + |
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Preference number: 4 (lower is better) Translates to: AASQTGNRLLGTSSPPLAGLRPR*SSRCLC Trigger: GCACAGGCAGCGAGAGCTCCATCGAGGGCGGAGGCC...GGCCAAGGGCGGGCTGGAGGTGCCCAGCAGCCGGTTTCCTGTTTGTGAGGCAGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS-3UTR TCA 90 bp | CCAGCTGCCTCACAAACAGGAAACCGGCTGCTGGGCACCTCCAGCCCGCCCTTGCTCTCGCCAAGGAGCTaGGCGCGGAGTAGTGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: PAASQTGNRLLGTSSPPLLSPRS*ARSSAG Trigger: GCCTGCACTACTCCGCGCTCAGCTCCTTGGCGAGAG...CAAGGGCGGGCTGGAGGTGCCCAGCAGCCGGTTTCCTGTTTGTGAGGCAGCTGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS-3UTR GCA 90 bp | GCCTCACAAACAGGAAACCGGCTGCTGGGCACCTCCAGCCCGCCCTTGGCCTTTTGGGAGCGCTGCGGCTaGGCTCCACTGGCGGCTTGT | + |
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Preference number: 4 (lower is better) Translates to: ASQTGNRLLGTSSPPLAFWERCG*APLAAC Trigger: ACAAGCCGCCAGTGGAGCGCAGCCGCAGCGCTCCCA...AAAGGCCAAGGGCGGGCTGGAGGTGCCCAGCAGCCGGTTTCCTGTTTGTGAGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS-3UTR TCA 90 bp | CCAGCTGCCTCACAAACAGGAAACCGGCTGCTGGGCACCTCCAGCCCGCCCTTGCAAGCAGGTCCTCGGTaGTGGAGCCCAGCTTGGGAG | + |
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Preference number: 4 (lower is better) Translates to: PAASQTGNRLLGTSSPPLQAGPR*WSPAWE Trigger: CTCCCAAGCTGGGCTCCATCACCGAGGACCTGCTTG...CAAGGGCGGGCTGGAGGTGCCCAGCAGCCGGTTTCCTGTTTGTGAGGCAGCTGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS-3UTR GCA 90 bp | CCAGCTGCCTCACAAACAGGAAACCGGCTGCTGGGCACCTCCAGCCCGCCCTTGGCTCGCTCCTCGGCATaGACCATGCGGATGCCTTGC | + |
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Preference number: 4 (lower is better) Translates to: PAASQTGNRLLGTSSPPLARSSA*TMRMPC Trigger: GCAAGGCATCCGCATGGTGCATGCCGAGGAGCGAGC...CAAGGGCGGGCTGGAGGTGCCCAGCAGCCGGTTTCCTGTTTGTGAGGCAGCTGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS-3UTR CCA 90 bp | CACCTCCAGCCCGCCCTTGGCCTTTTCCAACTTCAGCCAGCTCTCCCTCACCCACCCCGCGCGCCTGGATaGTGGTGGCATTCCCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: HLQPALGLFQLQPALPHPPRAPG*WWHSPG Trigger: ACCTGGGGAATGCCACCACCATCCAGGCGCGCGGGG...TGGGTGAGGGAGAGCTGGCTGAAGTTGGAAAAGGCCAAGGGCGGGCTGGAGGTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS-3UTR CCA 90 bp | CCAGCTGCCTCACAAACAGGAAACCGGCTGCTGGGCACCTCCAGCCCGCCCTTGGACACCAGCACCGCGTaGCAGCGTAGCATTACCGCC | + |
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Preference number: 4 (lower is better) Translates to: PAASQTGNRLLGTSSPPLDTSTA*QRSITA Trigger: GGCGGTAATGCTACGCTGCCACGCGGTGCTGGTGTC...CAAGGGCGGGCTGGAGGTGCCCAGCAGCCGGTTTCCTGTTTGTGAGGCAGCTGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS-3UTR TCA 90 bp | GGCACCTCCAGCCCGCCCTTGGCCTTTTCCAACTTCAGCCAGCTCTCCCTCACCAGCAGAGCCATGGCCTaGGCCTTCTCCGGCTTGGAC | + |
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Preference number: 4 (lower is better) Translates to: GTSSPPLAFSNFSQLSLTSRAMA*AFSGLD Trigger: GTCCAAGCCGGAGAAGGCTCAGGCCATGGCTCTGCT...GGTGAGGGAGAGCTGGCTGAAGTTGGAAAAGGCCAAGGGCGGGCTGGAGGTGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS-3UTR CCA 90 bp | GGGTCTGGAGAGGAAGTTAACCCCTCCTTCCCTAGCCCCAGCTGCCTCACAAACGTGATGTCCCCGAGCTaGGGCCCAGCGAGACCCCGC | + |
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Preference number: 4 (lower is better) Translates to: GSGEEVNPSFPSPSCLTNVMSPS*GPARPR Trigger: GCGGGGTCTCGCTGGGCCCCAGCTCGGGGACATCAC...GTTTGTGAGGCAGCTGGGGCTAGGGAAGGAGGGGTTAACTTCCTCTCCAGACCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| 3UTR CAA 72 bp | ACAGGAAACCGGCTGCTGGGCACCTCCAGCCCGCCCTaGGCCTTTTCCAACTTCAGCCAGCTCTCCCTCACC | + |
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Preference number: 4 (lower is better) Translates to: TGNRLLGTSSPP*AFSNFSQLSLT Trigger: GGTGAGGGAGAGCTGGCTGAAGTTGGAAAAGGCCAAGGGCGGGCTGGAGGTGCCCAGCAGCCGGTTTCCTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS-3UTR TCA 90 bp | GGCACCTCCAGCCCGCCCTTGGCCTTTTCCAACTTCAGCCAGCTCTCCCTCACCTGGGGTCCTCGCTGGTaGTGTGCAGCTTCTTGCGCT | + |
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Preference number: 4 (lower is better) Translates to: GTSSPPLAFSNFSQLSLTWGPRW*CAASCA Trigger: AGCGCAAGAAGCTGCACATCACCAGCGAGGACCCCA...GGTGAGGGAGAGCTGGCTGAAGTTGGAAAAGGCCAAGGGCGGGCTGGAGGTGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS-3UTR GCA 90 bp | CCAGCTGCCTCACAAACAGGAAACCGGCTGCTGGGCACCTCCAGCCCGCCCTTGCATGCACCATGCGGATaGCTTGCGCACTCACGGTCA | + |
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Preference number: 4 (lower is better) Translates to: PAASQTGNRLLGTSSPPLHAPCG*LAHSRS Trigger: TGACCGTGAGTGCGCAAGGCATCCGCATGGTGCATG...CAAGGGCGGGCTGGAGGTGCCCAGCAGCCGGTTTCCTGTTTGTGAGGCAGCTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS-3UTR GCA 90 bp | GCCTCACAAACAGGAAACCGGCTGCTGGGCACCTCCAGCCCGCCCTTGGCCTTTGCTCATCTAGGCTGGTaGTGTCAGCAGGGCCCGATG | + |
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Preference number: 4 (lower is better) Translates to: ASQTGNRLLGTSSPPLAFAHLGW*CQQGPM Trigger: CATCGGGCCCTGCTGACAGCACCAGCCTAGATGAGC...AAAGGCCAAGGGCGGGCTGGAGGTGCCCAGCAGCCGGTTTCCTGTTTGTGAGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS-3UTR TCA 90 bp | GGGTCTGGAGAGGAAGTTAACCCCTCCTTCCCTAGCCCCAGCTGCCTCACAAACAACTCCTGCTGCTGGTaGCGCGCATCATCCCGCCGC | + |
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Preference number: 4 (lower is better) Translates to: GSGEEVNPSFPSPSCLTNNSCCW*RASSRR Trigger: GCGGCGGGATGATGCGCGTCACCAGCAGCAGGAGTT...GTTTGTGAGGCAGCTGGGGCTAGGGAAGGAGGGGTTAACTTCCTCTCCAGACCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS-3UTR GCA 90 bp | CCAGCTGCCTCACAAACAGGAAACCGGCTGCTGGGCACCTCCAGCCCGCCCTTGTCTTGCTCCAGATCTTaGCCACCGCTAGGTCAGTGC | + |
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Preference number: 4 (lower is better) Translates to: PAASQTGNRLLGTSSPPLSCSRS*PPLGQC Trigger: GCACTGACCTAGCGGTGGGCAAGATCTGGAGCAAGA...CAAGGGCGGGCTGGAGGTGCCCAGCAGCCGGTTTCCTGTTTGTGAGGCAGCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS-3UTR GCA 90 bp | CACCTCCAGCCCGCCCTTGGCCTTTTCCAACTTCAGCCAGCTCTCCCTCACCCACTCAGCCTCTTCCTCTaGTGGATCCCCATCCCCCAC | + |
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Preference number: 4 (lower is better) Translates to: HLQPALGLFQLQPALPHPLSLFL*WIPIPH Trigger: GTGGGGGATGGGGATCCAGCAGAGGAAGAGGCTGAG...TGGGTGAGGGAGAGCTGGCTGAAGTTGGAAAAGGCCAAGGGCGGGCTGGAGGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS-3UTR CCA 90 bp | CCTCACAAACAGGAAACCGGCTGCTGGGCACCTCCAGCCCGCCCTTGGCCTTTTAGCCTCTTCCTCTGCTaGATCCCCATCCCCCACACC | + |
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Preference number: 4 (lower is better) Translates to: PHKQETGCWAPPARPWPFSLFLC*IPIPHT Trigger: GGTGTGGGGGATGGGGATCCAGCAGAGGAAGAGGCT...AAAAGGCCAAGGGCGGGCTGGAGGTGCCCAGCAGCCGGTTTCCTGTTTGTGAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS-3UTR CCA 90 bp | CCTCACAAACAGGAAACCGGCTGCTGGGCACCTCCAGCCCGCCCTTGGCCTTTTGCAGCTTCTTGCGCTTaGAGCGGAACATGCTGCCCA | + |
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Preference number: 4 (lower is better) Translates to: PHKQETGCWAPPARPWPFAASCA*SGTCCP Trigger: TGGGCAGCATGTTCCGCTCCAAGCGCAAGAAGCTGC...AAAAGGCCAAGGGCGGGCTGGAGGTGCCCAGCAGCCGGTTTCCTGTTTGTGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS-3UTR TCA 90 bp | GCAAACTTTCAAGAGTTTGAGTCTGAGGTAAACAGCCCAAGCTCCCCTATCCGATGCTGCCCACCCGGCTaGGCGCGCCTTCCGGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: ANFQEFESEVNSPSSPIRCCPPG*ARLPGR Trigger: CCTGCCCGGAAGGCGCGCTCAGCCGGGTGGGCAGCA...TCGGATAGGGGAGCTTGGGCTGTTTACCTCAGACTCAAACTCTTGAAAGTTTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS-3UTR GCA 90 bp | CCTCACAAACAGGAAACCGGCTGCTGGGCACCTCCAGCCCGCCCTTGGCCTTTTTCCTCGCTGGTGATGTaGAGCTTCTTGCGCTTGGAG | + |
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Preference number: 4 (lower is better) Translates to: PHKQETGCWAPPARPWPFSSLVM*SFLRLE Trigger: CTCCAAGCGCAAGAAGCTGCACATCACCAGCGAGGA...AAAAGGCCAAGGGCGGGCTGGAGGTGCCCAGCAGCCGGTTTCCTGTTTGTGAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS-3UTR GCA 90 bp | CACCTCCAGCCCGCCCTTGGCCTTTTCCAACTTCAGCCAGCTCTCCCTCACCCAAGGCAGTCCTCCAGATaGTCCTCTTCTTCCTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: HLQPALGLFQLQPALPHPRQSSR*SSSSSC Trigger: GCAGGAGGAAGAAGAGGAGCATCTGGAGGACTGCCT...TGGGTGAGGGAGAGCTGGCTGAAGTTGGAAAAGGCCAAGGGCGGGCTGGAGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS-3UTR CCA 90 bp | GCCTCACAAACAGGAAACCGGCTGCTGGGCACCTCCAGCCCGCCCTTGGCCTTTACTCTGCCAGAGCGTTaGCTGATGTCTGGTAAAGCA | + |
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Preference number: 4 (lower is better) Translates to: ASQTGNRLLGTSSPPLAFTLPER*LMSGKA Trigger: TGCTTTACCAGACATCAGCCAACGCTCTGGCAGAGT...AAAGGCCAAGGGCGGGCTGGAGGTGCCCAGCAGCCGGTTTCCTGTTTGTGAGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS-3UTR TCA 90 bp | GGCACCTCCAGCCCGCCCTTGGCCTTTTCCAACTTCAGCCAGCTCTCCCTCACCGTCACTAATAAGCTGTaGCAGTTGGGCCTTCATGTC | + |
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Preference number: 4 (lower is better) Translates to: GTSSPPLAFSNFSQLSLTVTNKL*QLGLHV Trigger: GACATGAAGGCCCAACTGTCACAGCTTATTAGTGAC...GGTGAGGGAGAGCTGGCTGAAGTTGGAAAAGGCCAAGGGCGGGCTGGAGGTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS-3UTR GCA 90 bp | GAGTTTGAGTCTGAGGTAAACAGCCCAAGCTCCCCTATCCGAAAGAACTGGGGGGGCCGGCCTCACTCTTaGTCCAGATCTTGCCCACCG | + |
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Preference number: 4 (lower is better) Translates to: EFESEVNSPSSPIRKNWGGRPHS*SRSCPP Trigger: CGGTGGGCAAGATCTGGAGCAAGAGTGAGGCCGGCC...CCCCCAGTTCTTTCGGATAGGGGAGCTTGGGCTGTTTACCTCAGACTCAAACTC 58% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS-3UTR CCA 90 bp | CAAAGTCGGGTCTGGGCTTCAAGTGCATCATTTTCCCTTTCCTGGAGGTTAGGGGCGGCTGCGCTCCACTaGCGGCTTGTAGCAGCAAGG | + |
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Preference number: 4 (lower is better) Translates to: QSRVWASSASFSLSWRLGAAALH*RLVAAR Trigger: CCTTGCTGCTACAAGCCGCCAGTGGAGCGCAGCCGC...CCCTAACCTCCAGGAAAGGGAAAATGATGCACTTGAAGCCCAGACCCGACTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS-3UTR GCA 90 bp | CAAAGTCGGGTCTGGGCTTCAAGTGCATCATTTTCCCTTTCCTGGAGGTTAGGGCGATGGAGCTCTCGCTaGCTGTGCTCTCGCCCGACA | + |
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Preference number: 4 (lower is better) Translates to: QSRVWASSASFSLSWRLGRWSSR*LCSRPT Trigger: TGTCGGGCGAGAGCACAGGCAGCGAGAGCTCCATCG...CCCTAACCTCCAGGAAAGGGAAAATGATGCACTTGAAGCCCAGACCCGACTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS-3UTR CCA 90 bp | CAAAGTCGGGTCTGGGCTTCAAGTGCATCATTTTCCCTTTCCTGGAGGTTAGGGCGCGCGCCTGGATGGTaGTGGCATTCCCCAGGTAGA | + |
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Preference number: 4 (lower is better) Translates to: QSRVWASSASFSLSWRLGRAPGW*WHSPGR Trigger: TCTACCTGGGGAATGCCACCACCATCCAGGCGCGCG...CCCTAACCTCCAGGAAAGGGAAAATGATGCACTTGAAGCCCAGACCCGACTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS-3UTR CCA 90 bp | CAAAGTCGGGTCTGGGCTTCAAGTGCATCATTTTCCCTTTCCTGGAGGTTAGGGCCCAGGCGAAGACTTTaGGTAGCCGCGCGTCTGCCA | + |
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Preference number: 4 (lower is better) Translates to: QSRVWASSASFSLSWRLGPRRRL*VAARLP Trigger: TGGCAGACGCGCGGCTACCCAAAGTCTTCGCCTGGG...CCCTAACCTCCAGGAAAGGGAAAATGATGCACTTGAAGCCCAGACCCGACTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS-3UTR GCA 90 bp | AGTAGGAGCTTTGGGGCCAGAGGAAGGTGTGTATTTCTAAAGGAAAATTCCTTTTTAGGCTTGGACGCCTaGCGCGGCGGCGCCTCGGCC | + |
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Preference number: 4 (lower is better) Translates to: SRSFGARGRCVFLKENSFLGLDA*RGGASA Trigger: GGCCGAGGCGCCGCCGCGGCAGGCGTCCAAGCCTAA...AAAGGAATTTTCCTTTAGAAATACACACCTTCCTCTGGCCCCAAAGCTCCTACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS-3UTR GCA 90 bp | CAAAGTCGGGTCTGGGCTTCAAGTGCATCATTTTCCCTTTCCTGGAGGTTAGGGCGTGCAAGAGCAGCTTaGGCAGCGGCACTAGTGGGA | + |
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Preference number: 4 (lower is better) Translates to: QSRVWASSASFSLSWRLGRARAA*AAALVG Trigger: TCCCACTAGTGCCGCTGCGCAAGCTGCTCTTGCACG...CCCTAACCTCCAGGAAAGGGAAAATGATGCACTTGAAGCCCAGACCCGACTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS-3UTR GCA 90 bp | AGTAGGAGCTTTGGGGCCAGAGGAAGGTGTGTATTTCTAAAGGAAAATTCCTTTCCAGCTTGGGAGCGCTaGGGCTGCGCTCCACTGGCG | + |
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Preference number: 4 (lower is better) Translates to: SRSFGARGRCVFLKENSFPAWER*GCAPLA Trigger: CGCCAGTGGAGCGCAGCCGCAGCGCTCCCAAGCTGG...AAAGGAATTTTCCTTTAGAAATACACACCTTCCTCTGGCCCCAAAGCTCCTACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS-3UTR GCA 90 bp | GCAAACTTTCAAGAGTTTGAGTCTGAGGTAAACAGCCCAAGCTCCCCTATCCGAACCACCAGCGCCCTCTaGGCCTCAGCCTCTTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: ANFQEFESEVNSPSSPIRTTSAL*ASASSS Trigger: AGAGGAAGAGGCTGAGGCGCAGAGGGCGCTGGTGGT...TCGGATAGGGGAGCTTGGGCTGTTTACCTCAGACTCAAACTCTTGAAAGTTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS-3UTR CCA 90 bp | AGTAGGAGCTTTGGGGCCAGAGGAAGGTGTGTATTTCTAAAGGAAAATTCCTTTCCGTCCCCGCGCGCCTaGATGGTGGTGGCATTCCCC | + |
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Preference number: 4 (lower is better) Translates to: SRSFGARGRCVFLKENSFPSPRA*MVVAFP Trigger: GGGGAATGCCACCACCATCCAGGCGCGCGGGGACGG...AAAGGAATTTTCCTTTAGAAATACACACCTTCCTCTGGCCCCAAAGCTCCTACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS-3UTR CCA 90 bp | GCAAACTTTCAAGAGTTTGAGTCTGAGGTAAACAGCCCAAGCTCCCCTATCCGAGCGCCTGGATGGTGGTaGCATTCCCCAGGTAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: ANFQEFESEVNSPSSPIRAPGWW*HSPGRA Trigger: TGCTCTACCTGGGGAATGCCACCACCATCCAGGCGC...TCGGATAGGGGAGCTTGGGCTGTTTACCTCAGACTCAAACTCTTGAAAGTTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS-3UTR CCA 90 bp | GCAAACTTTCAAGAGTTTGAGTCTGAGGTAAACAGCCCAAGCTCCCCTATCCGAGCGGCACTAGTGGGATaGTGTGTGCGCCCACCAACT | + |
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Preference number: 4 (lower is better) Translates to: ANFQEFESEVNSPSSPIRAALVG*CVRPPT Trigger: AGTTGGTGGGCGCACACACCATCCCACTAGTGCCGC...TCGGATAGGGGAGCTTGGGCTGTTTACCTCAGACTCAAACTCTTGAAAGTTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS-3UTR GCA 90 bp | AGTAGGAGCTTTGGGGCCAGAGGAAGGTGTGTATTTCTAAAGGAAAATTCCTTTAGCTCTCGCTGCCTGTaGTCTCGCCCGACAGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: SRSFGARGRCVFLKENSFSSRCL*SRPTAG Trigger: GCCTGCTGTCGGGCGAGAGCACAGGCAGCGAGAGCT...AAAGGAATTTTCCTTTAGAAATACACACCTTCCTCTGGCCCCAAAGCTCCTACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS-3UTR CCA 90 bp | AGAAATTTGGCAAACTTTCAAGAGTTTGAGTCTGAGGTAAACAGCCCAAGCTCCGAGCCTTCTCCGGCTTaGACACCAGCACCGCGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: RNLANFQEFESEVNSPSSEPSPA*TPAPRG Trigger: GCCACGCGGTGCTGGTGTCCAAGCCGGAGAAGGCTC...GGAGCTTGGGCTGTTTACCTCAGACTCAAACTCTTGAAAGTTTGCCAAATTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS-3UTR TCA 90 bp | AGTAGGAGCTTTGGGGCCAGAGGAAGGTGTGTATTTCTAAAGGAAAATTCCTTTCTGCCACACAGTAGGTaGCGCGGTGCAGCAGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: SRSFGARGRCVFLKENSFLPHSR*RGAAGR Trigger: TCTACCTGCTGCACCGCGTCACCTACTGTGTGGCAG...AAAGGAATTTTCCTTTAGAAATACACACCTTCCTCTGGCCCCAAAGCTCCTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS-3UTR GCA 90 bp | GCAAACTTTCAAGAGTTTGAGTCTGAGGTAAACAGCCCAAGCTCCCCTATCCGATTGTGCTTCAGCTCATaGCGGTATACCCAGGCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ANFQEFESEVNSPSSPIRLCFSS*RYTQAK Trigger: CTTCGCCTGGGTATACCGGCATGAGCTGAAGCACAA...TCGGATAGGGGAGCTTGGGCTGTTTACCTCAGACTCAAACTCTTGAAAGTTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS-3UTR GCA 90 bp | AGTAGGAGCTTTGGGGCCAGAGGAAGGTGTGTATTTCTAAAGGAAAATTCCTTTACCATGCGGATGCCTTaGGCACTCACGGTCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SRSFGARGRCVFLKENSFTMRMP*ALTVSF Trigger: GAAGCTGACCGTGAGTGCGCAAGGCATCCGCATGGT...AAAGGAATTTTCCTTTAGAAATACACACCTTCCTCTGGCCCCAAAGCTCCTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS-3UTR CCA 90 bp | AGAAATTTGGCAAACTTTCAAGAGTTTGAGTCTGAGGTAAACAGCCCAAGCTCCAAAGCAGCAGAGCCATaGCCTGAGCCTTCTCCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RNLANFQEFESEVNSPSSKAAEP*PEPSPA Trigger: AGCCGGAGAAGGCTCAGGCCATGGCTCTGCTGCTTT...GGAGCTTGGGCTGTTTACCTCAGACTCAAACTCTTGAAAGTTTGCCAAATTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS-3UTR CCA 90 bp | GCAAACTTTCAAGAGTTTGAGTCTGAGGTAAACAGCCCAAGCTCCCCTATCCGAATAAGCTGTGACAGTTaGGCCTTCATGTCTGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: ANFQEFESEVNSPSSPIRISCDS*AFMSEA Trigger: TGCCTCAGACATGAAGGCCCAACTGTCACAGCTTAT...TCGGATAGGGGAGCTTGGGCTGTTTACCTCAGACTCAAACTCTTGAAAGTTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| 3UTR CAA 72 bp | CTCCAACGTTTTGAAAGTGACTTTGTTAATGAGATATaGATGACAGAAAGAGGCCTTCCAGTCAGGGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LQRFESDFVNEI*MTERGLPVRGS Trigger: AGACCCCCTGACTGGAAGGCCTCTTTCTGTCATCAATATCTCATTAACAAAGTCACTTTCAAAACGTTGGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS-3UTR CAA 90 bp | GCTGCCTCACAAACAGGAAACCGGCTGCTGGGCACCTCCAGCCCGCCCTTGGCCGTGATGGAGCCCAGCTaGGGAGCGCTGCGGCTGCGC | + |
|
Preference number: 5 (lower is better) Translates to: AASQTGNRLLGTSSPPLAVMEPS*GALRLR Trigger: GCGCAGCCGCAGCGCTCCCAAGCTGGGCTCCATCAC...GGCCAAGGGCGGGCTGGAGGTGCCCAGCAGCCGGTTTCCTGTTTGTGAGGCAGC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS-3UTR CAA 90 bp | GCTGCCTCACAAACAGGAAACCGGCTGCTGGGCACCTCCAGCCCGCCCTTGGCCCCGTGCAAGAGCAGCTaGCGCAGCGGCACTAGTGGG | + |
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Preference number: 5 (lower is better) Translates to: AASQTGNRLLGTSSPPLAPCKSS*RSGTSG Trigger: CCCACTAGTGCCGCTGCGCAAGCTGCTCTTGCACGG...GGCCAAGGGCGGGCTGGAGGTGCCCAGCAGCCGGTTTCCTGTTTGTGAGGCAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS CCA 90 bp | CTCGGTGATGGAGCCCAGCTTGGGAGCGCTGCGGCTGCGCTCCACTaGCGGCTTGTAGCAGCAAGGTCCGTGCAAGAGCAGCTTGCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LGDGAQLGSAAAALH*RLVAARSVQEQLAQ Trigger: CTGCGCAAGCTGCTCTTGCACGGACCTTGCTGCTACAAGCCGCCAGTGGAGCGCAGCCGCAGCGCTCCCAAGCTGGGCTCCATCACCGAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS GCA 90 bp | GGGTGGCATCCAGGCCTCCGCCCTCGATGGAGCTCTCGCTGCCTGTaGTCTCGCCCGACAGCAGGCGTGTCACCCTTAAATCGGTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GWHPGLRPRWSSRCL*SRPTAGVSPLNRSP Trigger: TGGAGACCGATTTAAGGGTGACACGCCTGCTGTCGGGCGAGAGCACAGGCAGCGAGAGCTCCATCGAGGGCGGAGGCCTGGATGCCACCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS-3UTR CAA 90 bp | GCTGCCTCACAAACAGGAAACCGGCTGCTGGGCACCTCCAGCCCGCCCTTGGCCCACCATGCGGATGCCTaGCGCACTCACGGTCAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: AASQTGNRLLGTSSPPLAHHADA*RTHGQL Trigger: AAGCTGACCGTGAGTGCGCAAGGCATCCGCATGGTG...GGCCAAGGGCGGGCTGGAGGTGCCCAGCAGCCGGTTTCCTGTTTGTGAGGCAGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS GCA 90 bp | GCTCCACTGGCGGCTTGTAGCAGCAAGGTCCGTGCAAGAGCAGCTTaGGCAGCGGCACTAGTGGGATGGTGTGTGCGCCCACCAACTCCT | + |
|
Preference number: 5 (lower is better) Translates to: APLAACSSKVRARAA*AAALVGWCVRPPTP Trigger: AGGAGTTGGTGGGCGCACACACCATCCCACTAGTGCCGCTGCGCAAGCTGCTCTTGCACGGACCTTGCTGCTACAAGCCGCCAGTGGAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS CCA 90 bp | ACTCTGCCAGAGCGTTGGCTGATGTCTGGTAAAGCAGCAGAGCCATaGCCTGAGCCTTCTCCGGCTTGGACACCAGCACCGCGTGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: TLPERWLMSGKAAEP*PEPSPAWTPAPRGS Trigger: GCTGCCACGCGGTGCTGGTGTCCAAGCCGGAGAAGGCTCAGGCCATGGCTCTGCTGCTTTACCAGACATCAGCCAACGCTCTGGCAGAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS CCA 90 bp | AGCAAGGTCCGTGCAAGAGCAGCTTGCGCAGCGGCACTAGTGGGATaGTGTGTGCGCCCACCAACTCCTGCTGCTGGTGACGCGCATCAT | + |
|
Preference number: 5 (lower is better) Translates to: SKVRARAACAAALVG*CVRPPTPAAGDAHH Trigger: ATGATGCGCGTCACCAGCAGCAGGAGTTGGTGGGCGCACACACCATCCCACTAGTGCCGCTGCGCAAGCTGCTCTTGCACGGACCTTGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS-3UTR CAA 90 bp | GGGTCTGGAGAGGAAGTTAACCCCTCCTTCCCTAGCCCCAGCTGCCTCACAAACCGGCCGGCCTCACTCTaGCTCCAGATCTTGCCCACC | + |
|
Preference number: 5 (lower is better) Translates to: GSGEEVNPSFPSPSCLTNRPASL*LQILPT Trigger: GGTGGGCAAGATCTGGAGCAAGAGTGAGGCCGGCCG...GTTTGTGAGGCAGCTGGGGCTAGGGAAGGAGGGGTTAACTTCCTCTCCAGACCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS-3UTR CAA 90 bp | CCTCACAAACAGGAAACCGGCTGCTGGGCACCTCCAGCCCGCCCTTGGCCTTTTCTGCAGCTCCTCCTCTaGCTGTTCCCCAAGCAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: PHKQETGCWAPPARPWPFLQLLL*LFPKQV Trigger: GACCTGCTTGGGGAACAGCAAGAGGAGGAGCTGCAG...AAAAGGCCAAGGGCGGGCTGGAGGTGCCCAGCAGCCGGTTTCCTGTTTGTGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS GCA 90 bp | TCGTGGCCATTTTCCAGCGGGTCCAGCAAGTCCTCACATTCCAACTaGATGGCCACCACCAGCGCCCTCTGCGCCTCAGCCTCTTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SWPFSSGSSKSSHSN*MATTSALCASASSS Trigger: AGAGGAAGAGGCTGAGGCGCAGAGGGCGCTGGTGGTGGCCATGCAGTTGGAATGTGAGGACTTGCTGGACCCGCTGGAAAATGGCCACGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS TCA 90 bp | TGGCATTCCCCAGGTAGAGCACAGTGTAAGTGGGGTCCTCGCTGGTaGTGTGCAGCTTCTTGCGCTTGGAGCGGAACATGCTGCCCACCC | + |
|
Preference number: 5 (lower is better) Translates to: WHSPGRAQCKWGPRW*CAASCAWSGTCCPP Trigger: GGGTGGGCAGCATGTTCCGCTCCAAGCGCAAGAAGCTGCACATCACCAGCGAGGACCCCACTTACACTGTGCTCTACCTGGGGAATGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS TCA 90 bp | GGCACTAGTGGGATGGTGTGTGCGCCCACCAACTCCTGCTGCTGGTaGCGCGCATCATCCCGCCGCTTGAGACGTTTAAACTCTGCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: GTSGMVCAPTNSCCW*RASSRRLRRLNSAR Trigger: TCTGGCAGAGTTTAAACGTCTCAAGCGGCGGGATGATGCGCGTCACCAGCAGCAGGAGTTGGTGGGCGCACACACCATCCCACTAGTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS GCA 90 bp | TCCTCCTCCTCCAGGCAGTCCTCCAGATGCTCCTCTTCTTCCTCCTaGAGCTCCTCCTCTTGCTGTTCCCCAAGCAGGTCCTCGGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: SSSSRQSSRCSSSSS*SSSSCCSPSRSSVM Trigger: CATCACCGAGGACCTGCTTGGGGAACAGCAAGAGGAGGAGCTGCAGGAGGAAGAAGAGGAGCATCTGGAGGACTGCCTGGAGGAGGAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS GCA 90 bp | CCCACACCGTCCTCTTCTTCCTCCTCCTCCAGGCAGTCCTCCAGATaGTCCTCTTCTTCCTCCTGCAGCTCCTCCTCTTGCTGTTCCCCA | + |
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Preference number: 5 (lower is better) Translates to: PTPSSSSSSSRQSSR*SSSSSCSSSSCCSP Trigger: TGGGGAACAGCAAGAGGAGGAGCTGCAGGAGGAAGAAGAGGAGCATCTGGAGGACTGCCTGGAGGAGGAGGAAGAAGAGGACGGTGTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS-3UTR CAA 90 bp | GGGTCTGGAGAGGAAGTTAACCCCTCCTTCCCTAGCCCCAGCTGCCTCACAAACTGCAGCTTCTTGCGCTaGGAGCGGAACATGCTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: GSGEEVNPSFPSPSCLTNCSFLR*ERNMLP Trigger: GGGCAGCATGTTCCGCTCCAAGCGCAAGAAGCTGCA...GTTTGTGAGGCAGCTGGGGCTAGGGAAGGAGGGGTTAACTTCCTCTCCAGACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS-3UTR CAA 90 bp | GGGTCTGGAGAGGAAGTTAACCCCTCCTTCCCTAGCCCCAGCTGCCTCACAAACCTCTTGCTCCAGATCTaGCCCACCGCTAGGTCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: GSGEEVNPSFPSPSCLTNLLLQI*PTARSV Trigger: CACTGACCTAGCGGTGGGCAAGATCTGGAGCAAGAG...GTTTGTGAGGCAGCTGGGGCTAGGGAAGGAGGGGTTAACTTCCTCTCCAGACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS-3UTR CAA 90 bp | GGGTCTGGAGAGGAAGTTAACCCCTCCTTCCCTAGCCCCAGCTGCCTCACAAACCGTAGCATTACCGCCTaGTGCTTCAGCTCATGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: GSGEEVNPSFPSPSCLTNRSITA*CFSSCR Trigger: CCGGCATGAGCTGAAGCACAAGGCGGTAATGCTACG...GTTTGTGAGGCAGCTGGGGCTAGGGAAGGAGGGGTTAACTTCCTCTCCAGACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS-3UTR CAA 90 bp | CAAAGTCGGGTCTGGGCTTCAAGTGCATCATTTTCCCTTTCCTGGAGGTTAGGGGCCAGCAGCTCGAACTaGTGCTTCTTCCACGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: QSRVWASSASFSLSWRLGASSSN*CFFHGS Trigger: GCTGCCGTGGAAGAAGCACAAGTTCGAGCTGCTGGC...CCCTAACCTCCAGGAAAGGGAAAATGATGCACTTGAAGCCCAGACCCGACTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS-3UTR CAA 90 bp | AGTAGGAGCTTTGGGGCCAGAGGAAGGTGTGTATTTCTAAAGGAAAATTCCTTTGCAGGGCCCGATGGGTaGCCAGGGCTGACAGGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SRSFGARGRCVFLKENSFAGPDG*PGLTGV Trigger: CACCCCTGTCAGCCCTGGCAACCCATCGGGCCCTGC...AAAGGAATTTTCCTTTAGAAATACACACCTTCCTCTGGCCCCAAAGCTCCTACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS-3UTR CAA 90 bp | AGTAGGAGCTTTGGGGCCAGAGGAAGGTGTGTATTTCTAAAGGAAAATTCCTTTACCCAGGCGAAGACTTaGGGTAGCCGCGCGTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: SRSFGARGRCVFLKENSFTQAKT*GSRASA Trigger: GGCAGACGCGCGGCTACCCAAAGTCTTCGCCTGGGT...AAAGGAATTTTCCTTTAGAAATACACACCTTCCTCTGGCCCCAAAGCTCCTACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS CCA 90 bp | TTGCCAAAGCTAAGGTCGCCCAGGTCACTAATAAGCTGTGACAGTTaGGCCTTCATGTCTGAGGCACAGACTGACAGAGGAAGTGATGTC | + |
|
Preference number: 5 (lower is better) Translates to: LPKLRSPRSLISCDS*AFMSEAQTDRGSDV Trigger: GACATCACTTCCTCTGTCAGTCTGTGCCTCAGACATGAAGGCCCAACTGTCACAGCTTATTAGTGACCTGGGCGACCTTAGCTTTGGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS-3UTR CAA 90 bp | AGTAGGAGCTTTGGGGCCAGAGGAAGGTGTGTATTTCTAAAGGAAAATTCCTTTGTGATGTGCAGCTTCTaGCGCTTGGAGCGGAACATG | + |
|
Preference number: 5 (lower is better) Translates to: SRSFGARGRCVFLKENSFVMCSF*RLERNM Trigger: CATGTTCCGCTCCAAGCGCAAGAAGCTGCACATCAC...AAAGGAATTTTCCTTTAGAAATACACACCTTCCTCTGGCCCCAAAGCTCCTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS TCA 72 bp | TCTTGCGCTTGGAGCGGAACATGCTGCCCACCCGGCTaGGCGCGCCTTCCGGGCAGGCTCTCGCCAAGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: SCAWSGTCCPPG*ARLPGRLSPRS Trigger: GCTCCTTGGCGAGAGCCTGCCCGGAAGGCGCGCTCAGCCGGGTGGGCAGCATGTTCCGCTCCAAGCGCAAGA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS TCA 72 bp | TGGTGCTGTCAGCAGGGCCCGATGGGTTGCCAGGGCTaGCAGGGGTGGCATCCAGGCCTCCGCCCTCGATGG | + |
|
Preference number: 6 (lower is better) Translates to: WCCQQGPMGCQG*QGWHPGLRPRW Trigger: CCATCGAGGGCGGAGGCCTGGATGCCACCCCTGTCAGCCCTGGCAACCCATCGGGCCCTGCTGACAGCACCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS GCA 72 bp | TGGCATCCAGGCCTCCGCCCTCGATGGAGCTCTCGCTaGCTGTGCTCTCGCCCGACAGCAGGCGTGTCACCC | + |
|
Preference number: 6 (lower is better) Translates to: WHPGLRPRWSSR*LCSRPTAGVSP Trigger: GGGTGACACGCCTGCTGTCGGGCGAGAGCACAGGCAGCGAGAGCTCCATCGAGGGCGGAGGCCTGGATGCCA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS CCA 72 bp | GGAGCCCAGCTTGGGAGCGCTGCGGCTGCGCTCCACTaGCGGCTTGTAGCAGCAAGGTCCGTGCAAGAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: GAQLGSAAAALH*RLVAARSVQEQ Trigger: CTGCTCTTGCACGGACCTTGCTGCTACAAGCCGCCAGTGGAGCGCAGCCGCAGCGCTCCCAAGCTGGGCTCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS CAA 72 bp | TGTTCCCCAAGCAGGTCCTCGGTGATGGAGCCCAGCTaGGGAGCGCTGCGGCTGCGCTCCACTGGCGGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: CSPSRSSVMEPS*GALRLRSTGGL Trigger: CAAGCCGCCAGTGGAGCGCAGCCGCAGCGCTCCCAAGCTGGGCTCCATCACCGAGGACCTGCTTGGGGAACA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS TCA 72 bp | GCTCCTCCTCTTGCTGTTCCCCAAGCAGGTCCTCGGTaGTGGAGCCCAGCTTGGGAGCGCTGCGGCTGCGCT | + |
|
Preference number: 6 (lower is better) Translates to: APPLAVPQAGPR*WSPAWERCGCA Trigger: AGCGCAGCCGCAGCGCTCCCAAGCTGGGCTCCATCACCGAGGACCTGCTTGGGGAACAGCAAGAGGAGGAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS GCA 72 bp | TCCCTTGACGGCCGGCCTCACTCTTGCTCCAGATCTTaGCCACCGCTAGGTCAGTGCAACCGTCCCCGCGCG | + |
|
Preference number: 6 (lower is better) Translates to: SLDGRPHSCSRS*PPLGQCNRPRA Trigger: CGCGCGGGGACGGTTGCACTGACCTAGCGGTGGGCAAGATCTGGAGCAAGAGTGAGGCCGGCCGTCAAGGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS CAA 72 bp | GTGGGGTCCTCGCTGGTGATGTGCAGCTTCTTGCGCTaGGAGCGGAACATGCTGCCCACCCGGCTGAGCGCG | + |
|
Preference number: 6 (lower is better) Translates to: VGSSLVMCSFLR*ERNMLPTRLSA Trigger: CGCGCTCAGCCGGGTGGGCAGCATGTTCCGCTCCAAGCGCAAGAAGCTGCACATCACCAGCGAGGACCCCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS CAA 72 bp | TCATCTAGGCTGGTGCTGTCAGCAGGGCCCGATGGGTaGCCAGGGCTGACAGGGGTGGCATCCAGGCCTCCG | + |
|
Preference number: 6 (lower is better) Translates to: SSRLVLSAGPDG*PGLTGVASRPP Trigger: CGGAGGCCTGGATGCCACCCCTGTCAGCCCTGGCAACCCATCGGGCCCTGCTGACAGCACCAGCCTAGATGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS TCA 72 bp | AGACTTTGGGTAGCCGCGCGTCTGCCACACAGTAGGTaGCGCGGTGCAGCAGGTAGAGGTGGCCGGGACGTC | + |
|
Preference number: 6 (lower is better) Translates to: RLWVAARLPHSR*RGAAGRGGRDV Trigger: GACGTCCCGGCCACCTCTACCTGCTGCACCGCGTCACCTACTGTGTGGCAGACGCGCGGCTACCCAAAGTCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS GCA 72 bp | CCAGGCCTCCGCCCTCGATGGAGCTCTCGCTGCCTGTaGTCTCGCCCGACAGCAGGCGTGTCACCCTTAAAT | + |
|
Preference number: 6 (lower is better) Translates to: PGLRPRWSSRCL*SRPTAGVSPLN Trigger: ATTTAAGGGTGACACGCCTGCTGTCGGGCGAGAGCACAGGCAGCGAGAGCTCCATCGAGGGCGGAGGCCTGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS GCA 72 bp | CACTCTTGCTCCAGATCTTGCCCACCGCTAGGTCAGTaGAACCGTCCCCGCGCGCCTGGATGGTGGTGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: HSCSRSCPPLGQ*NRPRAPGWWWH Trigger: ATGCCACCACCATCCAGGCGCGCGGGGACGGTTGCACTGACCTAGCGGTGGGCAAGATCTGGAGCAAGAGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS GCA 72 bp | GCGGCTTGTAGCAGCAAGGTCCGTGCAAGAGCAGCTTaGGCAGCGGCACTAGTGGGATGGTGTGTGCGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: AACSSKVRARAA*AAALVGWCVRP Trigger: TGGGCGCACACACCATCCCACTAGTGCCGCTGCGCAAGCTGCTCTTGCACGGACCTTGCTGCTACAAGCCGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS CCA 72 bp | CCAGCGGGTCCAGCAAGTCCTCACATTCCAACTGCATaGCCACCACCAGCGCCCTCTGCGCCTCAGCCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: PAGPASPHIPTA*PPPAPSAPQPL Trigger: AAGAGGCTGAGGCGCAGAGGGCGCTGGTGGTGGCCATGCAGTTGGAATGTGAGGACTTGCTGGACCCGCTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS GCA 72 bp | TTTTCCAGCGGGTCCAGCAAGTCCTCACATTCCAACTaGATGGCCACCACCAGCGCCCTCTGCGCCTCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: FSSGSSKSSHSN*MATTSALCASA Trigger: GGCTGAGGCGCAGAGGGCGCTGGTGGTGGCCATGCAGTTGGAATGTGAGGACTTGCTGGACCCGCTGGAAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
||
| CDS CCA 72 bp | GAGCGTTGGCTGATGTCTGGTAAAGCAGCAGAGCCATaGCCTGAGCCTTCTCCGGCTTGGACACCAGCACCG | + |
|
Preference number: 6 (lower is better) Translates to: ERWLMSGKAAEP*PEPSPAWTPAP Trigger: CGGTGCTGGTGTCCAAGCCGGAGAAGGCTCAGGCCATGGCTCTGCTGCTTTACCAGACATCAGCCAACGCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS TCA 72 bp | CCTTGCGCACTCACGGTCAGCTTCATCTTAGTCCCTTaGCGGCCGGCCTCACTCTTGCTCCAGATCTTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: PCALTVSFILVP*RPASLLLQILP Trigger: GGGCAAGATCTGGAGCAAGAGTGAGGCCGGCCGTCAAGGGACTAAGATGAAGCTGACCGTGAGTGCGCAAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS CAA 72 bp | GCCTTGCGCACTCACGGTCAGCTTCATCTTAGTCCCTaGACGGCCGGCCTCACTCTTGCTCCAGATCTTGCC | + |
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Preference number: 6 (lower is better) Translates to: ALRTHGQLHLSP*TAGLTLAPDLA Trigger: GGCAAGATCTGGAGCAAGAGTGAGGCCGGCCGTCAAGGGACTAAGATGAAGCTGACCGTGAGTGCGCAAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS TCA 72 bp | CCAGGTAGAGCACAGTGTAAGTGGGGTCCTCGCTGGTaGTGTGCAGCTTCTTGCGCTTGGAGCGGAACATGC | + |
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Preference number: 6 (lower is better) Translates to: PGRAQCKWGPRW*CAASCAWSGTC Trigger: GCATGTTCCGCTCCAAGCGCAAGAAGCTGCACATCACCAGCGAGGACCCCACTTACACTGTGCTCTACCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS CAA 90 bp | AGCAGGCGTGTCACCCTTAAATCGGTCTCCAGGGTGCTCACGTCATaGCCAAAGCTAAGGTCGCCCAGGTCACTAATAAGCTGTGACAGT | + |
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Preference number: 6 (lower is better) Translates to: SRRVTLKSVSRVLTS*PKLRSPRSLISCDS Trigger: ACTGTCACAGCTTATTAGTGACCTGGGCGACCTTAGCTTTGGCAATGACGTGAGCACCCTGGAGACCGATTTAAGGGTGACACGCCTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS CCA 72 bp | CTAAGGTCGCCCAGGTCACTAATAAGCTGTGACAGTTaGGCCTTCATGTCTGAGGCACAGACTGACAGAGGA | + |
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Preference number: 6 (lower is better) Translates to: LRSPRSLISCDS*AFMSEAQTDRG Trigger: TCCTCTGTCAGTCTGTGCCTCAGACATGAAGGCCCAACTGTCACAGCTTATTAGTGACCTGGGCGACCTTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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| CDS CAA 72 bp | GTCACCCTTAAATCGGTCTCCAGGGTGCTCACGTCATaGCCAAAGCTAAGGTCGCCCAGGTCACTAATAAGC | + |
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Preference number: 6 (lower is better) Translates to: VTLKSVSRVLTS*PKLRSPRSLIS Trigger: GCTTATTAGTGACCTGGGCGACCTTAGCTTTGGCAATGACGTGAGCACCCTGGAGACCGATTTAAGGGTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059078.4 |
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