Pregenerated sensors for FAM3A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031399Ensembl transcript IDs: ENSMUST00000015427.13, ENSMUST00000114138.8, ENSMUST00000114139.8, ENSMUST00000114141.8, ENSMUST00000114142.8, ENSMUST00000114143.10, ENSMUST00000122894.8, ENSMUST00000141604.2, ENSMUST00000149218.8
Found 160 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GACAGAGGGCAGGATTTCAGGGAGAAAATATACAGTAGGTTGCTGTaGTGGGCCACTCACCTCCAGCCCACATGTCAAAGGCTCTGGCTT | + |
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Preference number: 1 (lower is better) Translates to: DRGQDFREKIYSRLL*WATHLQPTCQRLWL Trigger: AAGCCAGAGCCTTTGACATGTGGGCTGGAGGTGAGTGGCCCACCACAGCAACCTACTGTATATTTTCTCCCTGAAATCCTGCCCTCTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141604.2 |
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| 3UTR GCA 90 bp | GCAAAGACAGAGGGCAGGATTTCAGGGAGAAAATATACAGTAGGTTaGTGTGGTGGGCCACTCACCTCCAGCCCACATGTCAAAGGCTCT | + |
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Preference number: 1 (lower is better) Translates to: AKTEGRISGRKYTVG*CGGPLTSSPHVKGS Trigger: AGAGCCTTTGACATGTGGGCTGGAGGTGAGTGGCCCACCACAGCAACCTACTGTATATTTTCTCCCTGAAATCCTGCCCTCTGTCTTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141604.2 |
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| 3UTR CCA 90 bp | TTAGAAGGTGAGCCCTCTGACAGACACCTTGTGAGGAACTCTGATTaGACTCCAGCTACTTGGGCACTTAAGGCCAGATTGCTCCATTCA | + |
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Preference number: 1 (lower is better) Translates to: LEGEPSDRHLVRNSD*TPATWALKARLLHS Trigger: TGAATGGAGCAATCTGGCCTTAAGTGCCCAAGTAGCTGGAGTCCAATCAGAGTTCCTCACAAGGTGTCTGTCAGAGGGCTCACCTTCTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015427.13 ENSMUST00000114142.8 ENSMUST00000114143.10 |
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| 3UTR CCA 90 bp | TGGATCATCATAGGAAGCCACAAACACCAGGGTACCTTCATGCAGTaGCCGGATGAACTTCAAGAGATCATTGACATCTCCAGCCCACAT | + |
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Preference number: 1 (lower is better) Translates to: WIIIGSHKHQGTFMQ*PDELQEIIDISSPH Trigger: ATGTGGGCTGGAGATGTCAATGATCTCTTGAAGTTCATCCGGCCACTGCATGAAGGTACCCTGGTGTTTGTGGCTTCCTATGATGATCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149218.8 |
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| 3UTR GCA 90 bp | GGAACTCTGATTGGACTCCAGCTACTTGGGCACTTAAGGCCAGATTaGTCCATTCAGGCTTGCAGAAGTCATCCAATCAGTTCTGATTTG | + |
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Preference number: 1 (lower is better) Translates to: GTLIGLQLLGHLRPD*SIQACRSHPISSDL Trigger: CAAATCAGAACTGATTGGATGACTTCTGCAAGCCTGAATGGAGCAATCTGGCCTTAAGTGCCCAAGTAGCTGGAGTCCAATCAGAGTTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015427.13 ENSMUST00000114142.8 ENSMUST00000114143.10 |
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| 3UTR CCA 90 bp | ATTGCTCCATTCAGGCTTGCAGAAGTCATCCAATCAGTTCTGATTTaGCTTAAAGGATCACTGAAAACAGGGTTGGATACCAGTGCAGTG | + |
|
Preference number: 1 (lower is better) Translates to: IAPFRLAEVIQSVLI*LKGSLKTGLDTSAV Trigger: CACTGCACTGGTATCCAACCCTGTTTTCAGTGATCCTTTAAGCCAAATCAGAACTGATTGGATGACTTCTGCAAGCCTGAATGGAGCAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015427.13 ENSMUST00000114142.8 ENSMUST00000114143.10 |
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| 3UTR-3UTR TCA 90 bp | GTAGGTTGCTGTGGTGGGCCACTCACCTCCAGCCCACATGTCAAAGGCTCTGGCCTAGGAGCTCACCACTaGCCCCATTCACCAGGGCGA | + |
|
Preference number: 2 (lower is better) Translates to: VGCCGGPLTSSPHVKGSGLGAHH*PHSPGR Trigger: TCGCCCTGGTGAATGGGGTCAGTGGTGAGCTCCTAG...GCCAGAGCCTTTGACATGTGGGCTGGAGGTGAGTGGCCCACCACAGCAACCTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141604.2 |
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| 3UTR-3UTR GCA 90 bp | AGCCCTAATGTGTTAGGGAGGGGGAGCCTCATGCCTGGGCATGGGGCACAGTCTACACTGGTGCCATGCTaGCTCCTTCAGTCTGGTCCC | + |
|
Preference number: 2 (lower is better) Translates to: SPNVLGRGSLMPGHGAQSTLVPC*LLQSGP Trigger: GGGACCAGACTGAAGGAGGCAGCATGGCACCAGTGT...AGACTGTGCCCCATGCCCAGGCATGAGGCTCCCCCTCCCTAACACATTAGGGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000015427.13 ENSMUST00000114141.8 ENSMUST00000114142.8 ENSMUST00000114143.10 |
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| 3UTR-3UTR CCA 90 bp | GCAGCCCCCATCACCTTGAGGCCACTTTCAAGCCCTAATGTGTTAGGGAGGGGGCTGCCTCCTTCAGTCTaGTCCCAGAGCTCTGCTGTG | + |
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Preference number: 2 (lower is better) Translates to: AAPITLRPLSSPNVLGRGLPPSV*SQSSAV Trigger: CACAGCAGAGCTCTGGGACCAGACTGAAGGAGGCAG...CCCCCTCCCTAACACATTAGGGCTTGAAAGTGGCCTCAAGGTGATGGGGGCTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000015427.13 ENSMUST00000114142.8 ENSMUST00000114143.10 |
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| 3UTR-3UTR GCA 90 bp | CAGTGCCTCTGGGAGGGAGAGTTTCTTGAAGATGTCCCAACCTACCCAATACCTGGAGGGGGAGCCTCATaGCTGGGCATGGGGCACAGT | + |
|
Preference number: 2 (lower is better) Translates to: QCLWEGEFLEDVPTYPIPGGGAS*LGMGHS Trigger: ACTGTGCCCCATGCCCAGGCATGAGGCTCCCCCTCC...AGGTATTGGGTAGGTTGGGACATCTTCAAGAAACTCTCCCTCCCAGAGGCACTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000015427.13 ENSMUST00000114142.8 ENSMUST00000114143.10 |
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| 3UTR-3UTR TCA 90 bp | TGCAGTGCCTCTGGGAGGGAGAGTTTCTTGAAGATGTCCCAACCTACCCAATACGGCACAGTCTCCACCTaGCACTGGTGCCATGCTGCC | + |
|
Preference number: 2 (lower is better) Translates to: CSASGRESFLKMSQPTQYGTVST*HWCHAA Trigger: GGCAGCATGGCACCAGTGTCAGGTGGAGACTGTGCC...GTATTGGGTAGGTTGGGACATCTTCAAGAAACTCTCCCTCCCAGAGGCACTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015427.13 ENSMUST00000114142.8 ENSMUST00000114143.10 |
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| 3UTR-3UTR TCA 90 bp | GCCTCTGGGAGGGAGAGTTTCTTGAAGATGTCCCAACCTACCCAATACCTGCTCGACAGGGGCAAGCATTaGAGACCCTTGCCTCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: ASGRESFLKMSQPTQYLLDRGKH*RPLPLG Trigger: CCCCAGAGGCAAGGGTCTTCAATGCTTGCCCCTGTC...GAGCAGGTATTGGGTAGGTTGGGACATCTTCAAGAAACTCTCCCTCCCAGAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015427.13 ENSMUST00000114142.8 ENSMUST00000114143.10 |
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| 3UTR CAA 90 bp | CTTCAGGACAAGGCTGGGGCAGGCCGCATTTGTACTTCCTGGCCCTaGGTTCTGAGTAATGATAGCAGATGTGACCCATATGCCTGGCCC | + |
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Preference number: 2 (lower is better) Translates to: LQDKAGAGRICTSWP*VLSNDSRCDPYAWP Trigger: GGGCCAGGCATATGGGTCACATCTGCTATCATTACTCAGAACCAAGGGCCAGGAAGTACAAATGCGGCCTGCCCCAGCCTTGTCCTGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149218.8 |
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| 3UTR CAA 90 bp | CTCATGAGCATCTTGTCCTCGAGGCAGATCTTGGGCCCGATGACATaGGCAGCCCCGCTGACTATTCGAAAGCTCAGGTGCTCTTCAGGA | + |
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Preference number: 2 (lower is better) Translates to: LMSILSSRQILGPMT*AAPLTIRKLRCSSG Trigger: TCCTGAAGAGCACCTGAGCTTTCGAATAGTCAGCGGGGCTGCCAATGTCATCGGGCCCAAGATCTGCCTCGAGGACAAGATGCTCATGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149218.8 |
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| 3UTR-3UTR GCA 90 bp | CTCTGGGAGGGAGAGTTTCTTGAAGATGTCCCAACCTACCCAATACCTGCTCCAGAAATGGGCCAGCCCTaGAGCCCCCATCACCTTGAG | + |
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Preference number: 2 (lower is better) Translates to: LWEGEFLEDVPTYPIPAPEMGQP*SPHHLE Trigger: CTCAAGGTGATGGGGGCTGCAGGGCTGGCCCATTTC...TGGAGCAGGTATTGGGTAGGTTGGGACATCTTCAAGAAACTCTCCCTCCCAGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000015427.13 ENSMUST00000114142.8 ENSMUST00000114143.10 |
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| 3UTR-3UTR GCA 90 bp | TGCAGTGCCTCTGGGAGGGAGAGTTTCTTGAAGATGTCCCAACCTACCCAATACGAAATGGGCCAGCCCTaGAGCCCCCATCACCTTGAG | + |
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Preference number: 2 (lower is better) Translates to: CSASGRESFLKMSQPTQYEMGQP*SPHHLE Trigger: CTCAAGGTGATGGGGGCTGCAGGGCTGGCCCATTTC...GTATTGGGTAGGTTGGGACATCTTCAAGAAACTCTCCCTCCCAGAGGCACTGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000015427.13 ENSMUST00000114142.8 ENSMUST00000114143.10 |
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| 3UTR-3UTR GCA 90 bp | CATGAGCATCTTGTCCTCGAGGCAGATCTTGGGCCCGATGACATTGGCAGCCCCATTCGAAAGCTCAGGTaGTCTTCAGGACAAGGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: HEHLVLEADLGPDDIGSPIRKLR*SSGQGW Trigger: CCAGCCTTGTCCTGAAGAGCACCTGAGCTTTCGAAT...GGGGCTGCCAATGTCATCGGGCCCAAGATCTGCCTCGAGGACAAGATGCTCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149218.8 |
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| 3UTR CAA 90 bp | TTGTCTTTGACGCTGCTCATGAGCATCTTGTCCTCGAGGCAGATCTaGGGCCCGATGACATTGGCAGCCCCGCTGACTATTCGAAAGCTC | + |
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Preference number: 2 (lower is better) Translates to: LSLTLLMSILSSRQI*GPMTLAAPLTIRKL Trigger: GAGCTTTCGAATAGTCAGCGGGGCTGCCAATGTCATCGGGCCCAAGATCTGCCTCGAGGACAAGATGCTCATGAGCAGCGTCAAAGACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149218.8 |
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| 3UTR-3UTR TCA 90 bp | CAGTGCCTCTGGGAGGGAGAGTTTCTTGAAGATGTCCCAACCTACCCAATACCTCAGCCCCCATCACCTTaGGGCCACTTTCAAGCCCTA | + |
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Preference number: 2 (lower is better) Translates to: QCLWEGEFLEDVPTYPIPQPPSP*GHFQAL Trigger: TAGGGCTTGAAAGTGGCCTCAAGGTGATGGGGGCTG...AGGTATTGGGTAGGTTGGGACATCTTCAAGAAACTCTCCCTCCCAGAGGCACTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000015427.13 ENSMUST00000114142.8 ENSMUST00000114143.10 |
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| 3UTR-3UTR CCA 90 bp | TGCAGTGCCTCTGGGAGGGAGAGTTTCTTGAAGATGTCCCAACCTACCCAATACCTGCCTCCTTCAGTCTaGTCCCAGAGCTCTGCTGTG | + |
|
Preference number: 2 (lower is better) Translates to: CSASGRESFLKMSQPTQYLPPSV*SQSSAV Trigger: CACAGCAGAGCTCTGGGACCAGACTGAAGGAGGCAG...GTATTGGGTAGGTTGGGACATCTTCAAGAAACTCTCCCTCCCAGAGGCACTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015427.13 ENSMUST00000114142.8 ENSMUST00000114143.10 |
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| 3UTR-3UTR CCA 90 bp | ATCACTGAAAACAGGGTTGGATACCAGTGCAGTGCCTCTGGGAGGGAGAGTTTCCCTGACAAAATGAAATaGGCCAGCCCTGCAGCCCCC | + |
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Preference number: 2 (lower is better) Translates to: ITENRVGYQCSASGRESFPDKMK*ASPAAP Trigger: GGGGGCTGCAGGGCTGGCCCATTTCATTTTGTCAGG...GAAACTCTCCCTCCCAGAGGCACTGCACTGGTATCCAACCCTGTTTTCAGTGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015427.13 ENSMUST00000114142.8 ENSMUST00000114143.10 |
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| 3UTR-3UTR TCA 90 bp | GTAGGTTGCTGTGGTGGGCCACTCACCTCCAGCCCACATGTCAAAGGCTCTGGCATCCAAGGCAATACTTaGACAGCTAAGTGCAAAGAC | + |
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Preference number: 2 (lower is better) Translates to: VGCCGGPLTSSPHVKGSGIQGNT*TAKCKD Trigger: GTCTTTGCACTTAGCTGTTCAAGTATTGCCTTGGAT...GCCAGAGCCTTTGACATGTGGGCTGGAGGTGAGTGGCCCACCACAGCAACCTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141604.2 |
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| 3UTR-3UTR TCA 90 bp | AGGCCAGATTGCTCCATTCAGGCTTGCAGAAGTCATCCAATCAGTTCTGATTTGCAGCCCCCATCACCTTaGGGCCACTTTCAAGCCCTA | + |
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Preference number: 2 (lower is better) Translates to: RPDCSIQACRSHPISSDLQPPSP*GHFQAL Trigger: TAGGGCTTGAAAGTGGCCTCAAGGTGATGGGGGCTG...CAAATCAGAACTGATTGGATGACTTCTGCAAGCCTGAATGGAGCAATCTGGCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000015427.13 ENSMUST00000114142.8 ENSMUST00000114143.10 |
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| 3UTR-3UTR CCA 90 bp | ATCCAATCAGTTCTGATTTGGCTTAAAGGATCACTGAAAACAGGGTTGGATACCGGGGAGCCTCATGCCTaGGCATGGGGCACAGTCTCC | + |
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Preference number: 2 (lower is better) Translates to: IQSVLIWLKGSLKTGLDTGEPHA*AWGTVS Trigger: GGAGACTGTGCCCCATGCCCAGGCATGAGGCTCCCC...GGTATCCAACCCTGTTTTCAGTGATCCTTTAAGCCAAATCAGAACTGATTGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000015427.13 ENSMUST00000114142.8 ENSMUST00000114143.10 |
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| 3UTR-3UTR GCA 90 bp | CTTGCAGAAGTCATCCAATCAGTTCTGATTTGGCTTAAAGGATCACTGAAAACAGGAGGGGGAGCCTCATaGCTGGGCATGGGGCACAGT | + |
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Preference number: 2 (lower is better) Translates to: LAEVIQSVLIWLKGSLKTGGGAS*LGMGHS Trigger: ACTGTGCCCCATGCCCAGGCATGAGGCTCCCCCTCC...TGTTTTCAGTGATCCTTTAAGCCAAATCAGAACTGATTGGATGACTTCTGCAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000015427.13 ENSMUST00000114142.8 ENSMUST00000114143.10 |
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| 3UTR-3UTR TCA 90 bp | AACACCAGGGTACCTTCATGCAGTGGCCGGATGAACTTCAAGAGATCATTGACACCTGGCCCTTGGTTCTaGGTAATGATAGCAGATGTG | + |
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Preference number: 2 (lower is better) Translates to: NTRVPSCSGRMNFKRSLTPGPWF*VMIADV Trigger: CACATCTGCTATCATTACTCAGAACCAAGGGCCAGG...TGTCAATGATCTCTTGAAGTTCATCCGGCCACTGCATGAAGGTACCCTGGTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149218.8 |
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| 3UTR-3UTR CCA 90 bp | GCAATACTTGAACAGCTAAGTGCAAAGACAGAGGGCAGGATTTCAGGGAGAAAATACAGTAGGTTGCTGTaGTGGGCCACTCACCTCCAG | + |
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Preference number: 2 (lower is better) Translates to: AILEQLSAKTEGRISGRKYSRLL*WATHLQ Trigger: CTGGAGGTGAGTGGCCCACCACAGCAACCTACTGTA...TTTTCTCCCTGAAATCCTGCCCTCTGTCTTTGCACTTAGCTGTTCAAGTATTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141604.2 |
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| 3UTR-3UTR CCA 90 bp | ATCCAATCAGTTCTGATTTGGCTTAAAGGATCACTGAAAACAGGGTTGGATACCCTGCCTCCTTCAGTCTaGTCCCAGAGCTCTGCTGTG | + |
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Preference number: 2 (lower is better) Translates to: IQSVLIWLKGSLKTGLDTLPPSV*SQSSAV Trigger: CACAGCAGAGCTCTGGGACCAGACTGAAGGAGGCAG...GGTATCCAACCCTGTTTTCAGTGATCCTTTAAGCCAAATCAGAACTGATTGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015427.13 ENSMUST00000114142.8 ENSMUST00000114143.10 |
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| 3UTR-3UTR TCA 90 bp | CTTGCAGAAGTCATCCAATCAGTTCTGATTTGGCTTAAAGGATCACTGAAAACACAGCCCCCATCACCTTaGGGCCACTTTCAAGCCCTA | + |
|
Preference number: 2 (lower is better) Translates to: LAEVIQSVLIWLKGSLKTQPPSP*GHFQAL Trigger: TAGGGCTTGAAAGTGGCCTCAAGGTGATGGGGGCTG...TGTTTTCAGTGATCCTTTAAGCCAAATCAGAACTGATTGGATGACTTCTGCAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000015427.13 ENSMUST00000114142.8 ENSMUST00000114143.10 |
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| 3UTR TCA 72 bp | GAGCCTCATGCCTGGGCATGGGGCACAGTCTCCACCTaGCACTGGTGCCATGCTGCCTCCTTCAGTCTGGTC | + |
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Preference number: 3 (lower is better) Translates to: EPHAWAWGTVST*HWCHAASFSLV Trigger: GACCAGACTGAAGGAGGCAGCATGGCACCAGTGTCAGGTGGAGACTGTGCCCCATGCCCAGGCATGAGGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015427.13 ENSMUST00000114141.8 ENSMUST00000114142.8 ENSMUST00000114143.10 |
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| 3UTR GCA 72 bp | GGCATGGGGCACAGTCTCCACCTGACACTGGTGCCATaGTGCCTCCTTCAGTCTGGTCCCAGAGCTCTGCTG | + |
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Preference number: 3 (lower is better) Translates to: GMGHSLHLTLVP*CLLQSGPRALL Trigger: CAGCAGAGCTCTGGGACCAGACTGAAGGAGGCAGCATGGCACCAGTGTCAGGTGGAGACTGTGCCCCATGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015427.13 ENSMUST00000114141.8 ENSMUST00000114142.8 ENSMUST00000114143.10 |
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| 3UTR-3UTR CAA 90 bp | TCGAGGCAGATCTTGGGCCCGATGACATTGGCAGCCCCGCTGACTATTCGAAAGTGGGGCAGGCCGCATTaGTACTTCCTGGCCCTTGGT | + |
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Preference number: 3 (lower is better) Translates to: SRQILGPMTLAAPLTIRKWGRPH*YFLALG Trigger: ACCAAGGGCCAGGAAGTACAAATGCGGCCTGCCCCA...CTTTCGAATAGTCAGCGGGGCTGCCAATGTCATCGGGCCCAAGATCTGCCTCGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149218.8 |
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| 3UTR-3UTR CAA 90 bp | AAGGCTCTGGCTTCTAGGAGCTCACCACTGACCCCATTCACCAGGGCGATGTTCTTGGGCCCGATGACATaGGCAGCCCCGCTGACTATT | + |
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Preference number: 3 (lower is better) Translates to: KALASRSSPLTPFTRAMFLGPMT*AAPLTI Trigger: AATAGTCAGCGGGGCTGCCAATGTCATCGGGCCCAA...GAACATCGCCCTGGTGAATGGGGTCAGTGGTGAGCTCCTAGAAGCCAGAGCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149218.8 |
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| 3UTR CCA 72 bp | AGGACACAGGTACCTAAGCTCCCTGACAAAATGAAATaGGCCAGCCCTGCAGCCCCCATCACCTTGAGGCCA | + |
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Preference number: 3 (lower is better) Translates to: RTQVPKLPDKMK*ASPAAPITLRP Trigger: TGGCCTCAAGGTGATGGGGGCTGCAGGGCTGGCCCATTTCATTTTGTCAGGGAGCTTAGGTACCTGTGTCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000015427.13 ENSMUST00000114142.8 ENSMUST00000114143.10 |
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| 3UTR TCA 72 bp | TTGAAGATGTCCCAACCTACCCAATACCTGCTCCAGTaGCAGGGGCAAGCATTGAAGACCCTTGCCTCTGGG | + |
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Preference number: 3 (lower is better) Translates to: LKMSQPTQYLLQ*QGQALKTLASG Trigger: CCCAGAGGCAAGGGTCTTCAATGCTTGCCCCTGTCACTGGAGCAGGTATTGGGTAGGTTGGGACATCTTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015427.13 ENSMUST00000114142.8 ENSMUST00000114143.10 |
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| 3UTR TCA 72 bp | GGGCAGGCCGCATTTGTACTTCCTGGCCCTTGGTTCTaGGTAATGATAGCAGATGTGACCCATATGCCTGGC | + |
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Preference number: 3 (lower is better) Translates to: GQAAFVLPGPWF*VMIADVTHMPG Trigger: GCCAGGCATATGGGTCACATCTGCTATCATTACTCAGAACCAAGGGCCAGGAAGTACAAATGCGGCCTGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149218.8 |
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| 3UTR GCA 72 bp | GAGGGCAGGATTTCAGGGAGAAAATATACAGTAGGTTaGTGTGGTGGGCCACTCACCTCCAGCCCACATGTC | + |
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Preference number: 3 (lower is better) Translates to: EGRISGRKYTVG*CGGPLTSSPHV Trigger: GACATGTGGGCTGGAGGTGAGTGGCCCACCACAGCAACCTACTGTATATTTTCTCCCTGAAATCCTGCCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141604.2 |
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| 3UTR CCA 72 bp | CAGGACAAGGCTGGGGCAGGCCGCATTTGTACTTCCTaGCCCTTGGTTCTGAGTAATGATAGCAGATGTGAC | + |
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Preference number: 3 (lower is better) Translates to: QDKAGAGRICTS*PLVLSNDSRCD Trigger: GTCACATCTGCTATCATTACTCAGAACCAAGGGCCAGGAAGTACAAATGCGGCCTGCCCCAGCCTTGTCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149218.8 |
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| 3UTR-3UTR CAA 90 bp | GTACCTTCATGCAGTGGCCGGATGAACTTCAAGAGATCATTGACATCTCCAGCCTCCTCGAGGCAGATCTaGGGCCCGATGACATTGGCA | + |
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Preference number: 3 (lower is better) Translates to: VPSCSGRMNFKRSLTSPASSRQI*GPMTLA Trigger: TGCCAATGTCATCGGGCCCAAGATCTGCCTCGAGGA...GGCTGGAGATGTCAATGATCTCTTGAAGTTCATCCGGCCACTGCATGAAGGTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149218.8 |
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| 3UTR TCA 72 bp | GATACCAGTGCAGTGCCTCTGGGAGGGAGAGTTTCTTaGAGATGTCCCAACCTACCCAATACCTGCTCCAGT | + |
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Preference number: 3 (lower is better) Translates to: DTSAVPLGGRVS*RCPNLPNTCSS Trigger: ACTGGAGCAGGTATTGGGTAGGTTGGGACATCTTCAAGAAACTCTCCCTCCCAGAGGCACTGCACTGGTATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015427.13 ENSMUST00000114142.8 ENSMUST00000114143.10 |
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| 3UTR CCA 72 bp | GAGCCCTCTGACAGACACCTTGTGAGGAACTCTGATTaGACTCCAGCTACTTGGGCACTTAAGGCCAGATTG | + |
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Preference number: 3 (lower is better) Translates to: EPSDRHLVRNSD*TPATWALKARL Trigger: CAATCTGGCCTTAAGTGCCCAAGTAGCTGGAGTCCAATCAGAGTTCCTCACAAGGTGTCTGTCAGAGGGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015427.13 ENSMUST00000114142.8 ENSMUST00000114143.10 |
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| 3UTR-3UTR CAA 90 bp | GACGCTGCTCATGAGCATCTTGTCCTCGAGGCAGATCTTGGGCCCGATGACATTTGTACTTCCTGGCCCTaGGTTCTGAGTAATGATAGC | + |
|
Preference number: 3 (lower is better) Translates to: DAAHEHLVLEADLGPDDICTSWP*VLSNDS Trigger: GCTATCATTACTCAGAACCAAGGGCCAGGAAGTACA...AATGTCATCGGGCCCAAGATCTGCCTCGAGGACAAGATGCTCATGAGCAGCGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149218.8 |
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| 3UTR-3UTR CAA 90 bp | AACACCAGGGTACCTTCATGCAGTGGCCGGATGAACTTCAAGAGATCATTGACACGGCCCACATTGTCTTaGACGCTGCTCATGAGCATC | + |
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Preference number: 3 (lower is better) Translates to: NTRVPSCSGRMNFKRSLTRPTLS*TLLMSI Trigger: GATGCTCATGAGCAGCGTCAAAGACAATGTGGGCCG...TGTCAATGATCTCTTGAAGTTCATCCGGCCACTGCATGAAGGTACCCTGGTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149218.8 |
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| 3UTR CCA 72 bp | GATTTCAGGGAGAAAATATACAGTAGGTTGCTGTGGTaGGCCACTCACCTCCAGCCCACATGTCAAAGGCTC | + |
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Preference number: 3 (lower is better) Translates to: DFREKIYSRLLW*ATHLQPTCQRL Trigger: GAGCCTTTGACATGTGGGCTGGAGGTGAGTGGCCCACCACAGCAACCTACTGTATATTTTCTCCCTGAAATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141604.2 |
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| 3UTR CCA 72 bp | CAGGATTTCAGGGAGAAAATATACAGTAGGTTGCTGTaGTGGGCCACTCACCTCCAGCCCACATGTCAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: QDFREKIYSRLL*WATHLQPTCQR Trigger: CCTTTGACATGTGGGCTGGAGGTGAGTGGCCCACCACAGCAACCTACTGTATATTTTCTCCCTGAAATCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141604.2 |
||
| 3UTR-3UTR CAA 90 bp | TCAGGGAGAAAATATACAGTAGGTTGCTGTGGTGGGCCACTCACCTCCAGCCCAAGATTTCCCCATCCCTaGTATTTTGTAAATCCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: SGRKYTVGCCGGPLTSSPRFPHP*YFVNPR Trigger: CCTTGGATTTACAAAATACAAGGGATGGGGAAATCT...TGGGCTGGAGGTGAGTGGCCCACCACAGCAACCTACTGTATATTTTCTCCCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000141604.2 |
||
| 3UTR CCA 72 bp | TTCAGGCTTGCAGAAGTCATCCAATCAGTTCTGATTTaGCTTAAAGGATCACTGAAAACAGGGTTGGATACC | + |
|
Preference number: 3 (lower is better) Translates to: FRLAEVIQSVLI*LKGSLKTGLDT Trigger: GGTATCCAACCCTGTTTTCAGTGATCCTTTAAGCCAAATCAGAACTGATTGGATGACTTCTGCAAGCCTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015427.13 ENSMUST00000114142.8 ENSMUST00000114143.10 |
||
| CDS-3UTR TCA 90 bp | AGTCTCCACCTGACACTGGTGCCATGCTGCCTCCTTCAGTCTGGTCCCAGAGCTCTAGGAGCTCACCACTaGCCCCATTCACCAGGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: SLHLTLVPCCLLQSGPRALGAHH*PHSPGR Trigger: TCGCCCTGGTGAATGGGGTCAGTGGTGAGCTCCTAG...AGCTCTGGGACCAGACTGAAGGAGGCAGCATGGCACCAGTGTCAGGTGGAGACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015427.13 ENSMUST00000114142.8 ENSMUST00000114143.10 |
||
| CDS-3UTR TCA 90 bp | GCCTCATGCCTGGGCATGGGGCACAGTCTCCACCTGACACTGGTGCCATGCTGCAGTTCTCTGGGCTGGTaGAGAACTGCTGAATTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: ASCLGMGHSLHLTLVPCCSSLGW*RTAEFE Trigger: CTCGAATTCAGCAGTTCTTCACCAGCCCAGAGAACT...GCAGCATGGCACCAGTGTCAGGTGGAGACTGTGCCCCATGCCCAGGCATGAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015427.13 ENSMUST00000114141.8 ENSMUST00000114142.8 ENSMUST00000114143.10 |
||
| CDS-3UTR TCA 90 bp | GGGCATGGGGCACAGTCTCCACCTGACACTGGTGCCATGCTGCCTCCTTCAGTCTGGTTCTGCAGTCACTaGGTTCTCTGGGCTGGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: GHGAQSPPDTGAMLPPSVWFCSH*VLWAGE Trigger: TTCACCAGCCCAGAGAACTCAGTGACTGCAGAACCA...GACTGAAGGAGGCAGCATGGCACCAGTGTCAGGTGGAGACTGTGCCCCATGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015427.13 ENSMUST00000114141.8 ENSMUST00000114142.8 ENSMUST00000114143.10 |
||
| CDS-3UTR GCA 90 bp | GTGTTAGGGAGGGGGAGCCTCATGCCTGGGCATGGGGCACAGTCTCCACCTGACATTCGAAAGCTCAGGTaGTCTTCAGGACAAGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VLGRGSLMPGHGAQSPPDIRKLR*SSGQGW Trigger: CCAGCCTTGTCCTGAAGAGCACCTGAGCTTTCGAAT...GTCAGGTGGAGACTGTGCCCCATGCCCAGGCATGAGGCTCCCCCTCCCTAACAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000015427.13 ENSMUST00000114141.8 ENSMUST00000114142.8 ENSMUST00000114143.10 |
||
| CDS-3UTR CCA 90 bp | GGGCATGGGGCACAGTCTCCACCTGACACTGGTGCCATGCTGCCTCCTTCAGTCTGTTCTGCACACCTTTaGCTCCCACAAACACCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GHGAQSPPDTGAMLPPSVCSAHL*LPQTPS Trigger: GCTGGGTGTTTGTGGGAGCCAAAGGTGTGCAGAACA...GACTGAAGGAGGCAGCATGGCACCAGTGTCAGGTGGAGACTGTGCCCCATGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015427.13 ENSMUST00000114141.8 ENSMUST00000114142.8 ENSMUST00000114143.10 |
||
| CDS-3UTR CCA 90 bp | CTGGGCATGGGGCACAGTCTCCACCTGACACTGGTGCCATGCTGCCTCCTTCAGTGTTCTGCACACCTTTaGCTCCCACAAACACCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LGMGHSLHLTLVPCCLLQCSAHL*LPQTPS Trigger: GCTGGGTGTTTGTGGGAGCCAAAGGTGTGCAGAACA...CTGAAGGAGGCAGCATGGCACCAGTGTCAGGTGGAGACTGTGCCCCATGCCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015427.13 ENSMUST00000114141.8 ENSMUST00000114142.8 ENSMUST00000114143.10 |
||
| CDS-3UTR CCA 90 bp | CCTAATGTGTTAGGGAGGGGGAGCCTCATGCCTGGGCATGGGGCACAGTCTCCACATCTCCAGGGCCTCTaGCCAGCCCTCATACTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: PNVLGRGSLMPGHGAQSPHLQGL*PALILV Trigger: AACAAGTATGAGGGCTGGCCAGAGGCCCTGGAGATG...TGGAGACTGTGCCCCATGCCCAGGCATGAGGCTCCCCCTCCCTAACACATTAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000015427.13 ENSMUST00000114141.8 ENSMUST00000114142.8 ENSMUST00000114143.10 |
||
| CDS-3UTR CCA 90 bp | TGGGCCAGCCCTGCAGCCCCCATCACCTTGAGGCCACTTTCAAGCCCTAATGTGCATCTCCAGGGCCTCTaGCCAGCCCTCATACTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: WASPAAPITLRPLSSPNVHLQGL*PALILV Trigger: AACAAGTATGAGGGCTGGCCAGAGGCCCTGGAGATG...CACATTAGGGCTTGAAAGTGGCCTCAAGGTGATGGGGGCTGCAGGGCTGGCCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000015427.13 ENSMUST00000114142.8 ENSMUST00000114143.10 |
||
| CDS-3UTR TCA 90 bp | TGGGCCAGCCCTGCAGCCCCCATCACCTTGAGGCCACTTTCAAGCCCTAATGTGTGGTTCTGCAGTCACTaGGTTCTCTGGGCTGGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: WASPAAPITLRPLSSPNVWFCSH*VLWAGE Trigger: TTCACCAGCCCAGAGAACTCAGTGACTGCAGAACCA...CACATTAGGGCTTGAAAGTGGCCTCAAGGTGATGGGGGCTGCAGGGCTGGCCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000015427.13 ENSMUST00000114142.8 ENSMUST00000114143.10 |
||
| CDS-3UTR GCA 90 bp | GGCATGGGGCACAGTCTCCACCTGACACTGGTGCCATGCTGCCTCCTTCAGTCTAAGGGGCTCTTGTTCTaGACACCTTTGGCTCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: GMGHSLHLTLVPCCLLQSKGLLF*TPLAPT Trigger: TGTGGGAGCCAAAGGTGTGCAGAACAAGAGCCCCTT...AGACTGAAGGAGGCAGCATGGCACCAGTGTCAGGTGGAGACTGTGCCCCATGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000015427.13 ENSMUST00000114141.8 ENSMUST00000114142.8 ENSMUST00000114143.10 |
||
| CDS-3UTR CCA 90 bp | AGCCCTAATGTGTTAGGGAGGGGGAGCCTCATGCCTGGGCATGGGGCACAGTCTTGTTCTGCACACCTTTaGCTCCCACAAACACCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SPNVLGRGSLMPGHGAQSCSAHL*LPQTPS Trigger: GCTGGGTGTTTGTGGGAGCCAAAGGTGTGCAGAACA...AGACTGTGCCCCATGCCCAGGCATGAGGCTCCCCCTCCCTAACACATTAGGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000015427.13 ENSMUST00000114141.8 ENSMUST00000114142.8 ENSMUST00000114143.10 |
||
| CDS-3UTR CCA 90 bp | GCAGCCCCCATCACCTTGAGGCCACTTTCAAGCCCTAATGTGTTAGGGAGGGGGCATCTCCAGGGCCTCTaGCCAGCCCTCATACTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: AAPITLRPLSSPNVLGRGHLQGL*PALILV Trigger: AACAAGTATGAGGGCTGGCCAGAGGCCCTGGAGATG...CCCCCTCCCTAACACATTAGGGCTTGAAAGTGGCCTCAAGGTGATGGGGGCTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000015427.13 ENSMUST00000114142.8 ENSMUST00000114143.10 |
||
| CDS-3UTR CCA 90 bp | AGTCTCCACCTGACACTGGTGCCATGCTGCCTCCTTCAGTCTGGTCCCAGAGCTCATCTCCAGGGCCTCTaGCCAGCCCTCATACTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SLHLTLVPCCLLQSGPRAHLQGL*PALILV Trigger: AACAAGTATGAGGGCTGGCCAGAGGCCCTGGAGATG...AGCTCTGGGACCAGACTGAAGGAGGCAGCATGGCACCAGTGTCAGGTGGAGACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000015427.13 ENSMUST00000114141.8 ENSMUST00000114142.8 ENSMUST00000114143.10 |
||
| CDS-3UTR TCA 90 bp | ATGGGGCACAGTCTCCACCTGACACTGGTGCCATGCTGCCTCCTTCAGTCTGGTTGGTTCTGCAGTCACTaGGTTCTCTGGGCTGGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: MGHSLHLTLVPCCLLQSGWFCSH*VLWAGE Trigger: TTCACCAGCCCAGAGAACTCAGTGACTGCAGAACCA...ACCAGACTGAAGGAGGCAGCATGGCACCAGTGTCAGGTGGAGACTGTGCCCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015427.13 ENSMUST00000114141.8 ENSMUST00000114142.8 ENSMUST00000114143.10 |
||
| CDS-3UTR GCA 90 bp | CCTAATGTGTTAGGGAGGGGGAGCCTCATGCCTGGGCATGGGGCACAGTCTCCAATTCGAAAGCTCAGGTaGTCTTCAGGACAAGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PNVLGRGSLMPGHGAQSPIRKLR*SSGQGW Trigger: CCAGCCTTGTCCTGAAGAGCACCTGAGCTTTCGAAT...TGGAGACTGTGCCCCATGCCCAGGCATGAGGCTCCCCCTCCCTAACACATTAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000015427.13 ENSMUST00000114141.8 ENSMUST00000114142.8 ENSMUST00000114143.10 |
||
| CDS-3UTR GCA 90 bp | ATGGGGCACAGTCTCCACCTGACACTGGTGCCATGCTGCCTCCTTCAGTCTGGTAAGGGGCTCTTGTTCTaGACACCTTTGGCTCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: MGHSLHLTLVPCCLLQSGKGLLF*TPLAPT Trigger: TGTGGGAGCCAAAGGTGTGCAGAACAAGAGCCCCTT...ACCAGACTGAAGGAGGCAGCATGGCACCAGTGTCAGGTGGAGACTGTGCCCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000015427.13 ENSMUST00000114141.8 ENSMUST00000114142.8 ENSMUST00000114143.10 |
||
| 3UTR CAA 72 bp | ATCTTGTCCTCGAGGCAGATCTTGGGCCCGATGACATaGGCAGCCCCGCTGACTATTCGAAAGCTCAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: ILSSRQILGPMT*AAPLTIRKLRC Trigger: GCACCTGAGCTTTCGAATAGTCAGCGGGGCTGCCAATGTCATCGGGCCCAAGATCTGCCTCGAGGACAAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149218.8 |
||
| 3UTR CAA 72 bp | ACGCTGCTCATGAGCATCTTGTCCTCGAGGCAGATCTaGGGCCCGATGACATTGGCAGCCCCGCTGACTATT | + |
|
Preference number: 4 (lower is better) Translates to: TLLMSILSSRQI*GPMTLAAPLTI Trigger: AATAGTCAGCGGGGCTGCCAATGTCATCGGGCCCAAGATCTGCCTCGAGGACAAGATGCTCATGAGCAGCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149218.8 |
||
| CDS-3UTR TCA 90 bp | CTTTCAAGCCCTAATGTGTTAGGGAGGGGGAGCCTCATGCCTGGGCATGGGGCAAGTTCTCTGGGCTGGTaGAGAACTGCTGAATTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: LSSPNVLGRGSLMPGHGASSLGW*RTAEFE Trigger: CTCGAATTCAGCAGTTCTTCACCAGCCCAGAGAACT...TGCCCCATGCCCAGGCATGAGGCTCCCCCTCCCTAACACATTAGGGCTTGAAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000015427.13 ENSMUST00000114141.8 ENSMUST00000114142.8 ENSMUST00000114143.10 |
||
| CDS-3UTR TCA 90 bp | TCAAAGGCTCTGGCTTCTAGGAGCTCACCACTGACCCCATTCACCAGGGCGATGGAGATCTGCAGTCACTaGGTTCTCTGGGCTGGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SKALASRSSPLTPFTRAMEICSH*VLWAGE Trigger: TTCACCAGCCCAGAGAACTCAGTGACTGCAGATCTC...CATCGCCCTGGTGAATGGGGTCAGTGGTGAGCTCCTAGAAGCCAGAGCCTTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149218.8 |
||
| CDS-3UTR GCA 90 bp | CACAGTCTCCACCTGACACTGGTGCCATGCTGCCTCCTTCAGTCTGGTCCCAGAATTCGAAAGCTCAGGTaGTCTTCAGGACAAGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: HSLHLTLVPCCLLQSGPRIRKLR*SSGQGW Trigger: CCAGCCTTGTCCTGAAGAGCACCTGAGCTTTCGAAT...TCTGGGACCAGACTGAAGGAGGCAGCATGGCACCAGTGTCAGGTGGAGACTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000015427.13 ENSMUST00000114141.8 ENSMUST00000114142.8 ENSMUST00000114143.10 |
||
| CDS-3UTR GCA 90 bp | GCCTCATGCCTGGGCATGGGGCACAGTCTCCACCTGACACTGGTGCCATGCTGCTTACTGTTCTTCATATaGTGCTCAAAGGGGCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ASCLGMGHSLHLTLVPCCLLFFI*CSKGLL Trigger: CAAGAGCCCCTTTGAGCAGCATATGAAGAACAGTAA...GCAGCATGGCACCAGTGTCAGGTGGAGACTGTGCCCCATGCCCAGGCATGAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000015427.13 ENSMUST00000114141.8 ENSMUST00000114142.8 ENSMUST00000114143.10 |
||
| CDS-3UTR GCA 90 bp | GTGTTAGGGAGGGGGAGCCTCATGCCTGGGCATGGGGCACAGTCTCCACCTGACTTACTGTTCTTCATATaGTGCTCAAAGGGGCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: VLGRGSLMPGHGAQSPPDLLFFI*CSKGLL Trigger: CAAGAGCCCCTTTGAGCAGCATATGAAGAACAGTAA...GTCAGGTGGAGACTGTGCCCCATGCCCAGGCATGAGGCTCCCCCTCCCTAACAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000015427.13 ENSMUST00000114141.8 ENSMUST00000114142.8 ENSMUST00000114143.10 |
||
| CDS-3UTR CCA 90 bp | GGGAGCCTCATGCCTGGGCATGGGGCACAGTCTCCACCTGACACTGGTGCCATGATTCATCTTGGTAGCTaGATCATCATAGGAAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GSLMPGHGAQSPPDTGAMIHLGS*IIIGSH Trigger: GTGGCTTCCTATGATGATCCAGCTACCAAGATGAAT...CATGGCACCAGTGTCAGGTGGAGACTGTGCCCCATGCCCAGGCATGAGGCTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015427.13 ENSMUST00000114141.8 ENSMUST00000114142.8 ENSMUST00000114143.10 |
||
| CDS-3UTR GCA 90 bp | CTGGGCATGGGGCACAGTCTCCACCTGACACTGGTGCCATGCTGCCTCCTTCAGTTACTGTTCTTCATATaGTGCTCAAAGGGGCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LGMGHSLHLTLVPCCLLQLLFFI*CSKGLL Trigger: CAAGAGCCCCTTTGAGCAGCATATGAAGAACAGTAA...CTGAAGGAGGCAGCATGGCACCAGTGTCAGGTGGAGACTGTGCCCCATGCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000015427.13 ENSMUST00000114141.8 ENSMUST00000114142.8 ENSMUST00000114143.10 |
||
| CDS-3UTR CCA 90 bp | GGGCACAGTCTCCACCTGACACTGGTGCCATGCTGCCTCCTTCAGTCTGGTCCCATTCATCTTGGTAGCTaGATCATCATAGGAAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GHSLHLTLVPCCLLQSGPIHLGS*IIIGSH Trigger: GTGGCTTCCTATGATGATCCAGCTACCAAGATGAAT...GGGACCAGACTGAAGGAGGCAGCATGGCACCAGTGTCAGGTGGAGACTGTGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000015427.13 ENSMUST00000114141.8 ENSMUST00000114142.8 ENSMUST00000114143.10 |
||
| CDS-3UTR CCA 90 bp | GGGCATGGGGCACAGTCTCCACCTGACACTGGTGCCATGCTGCCTCCTTCAGTCATTCATCTTGGTAGCTaGATCATCATAGGAAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GHGAQSPPDTGAMLPPSVIHLGS*IIIGSH Trigger: GTGGCTTCCTATGATGATCCAGCTACCAAGATGAAT...GACTGAAGGAGGCAGCATGGCACCAGTGTCAGGTGGAGACTGTGCCCCATGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015427.13 ENSMUST00000114141.8 ENSMUST00000114142.8 ENSMUST00000114143.10 |
||
| CDS-3UTR CCA 90 bp | CTGGGCATGGGGCACAGTCTCCACCTGACACTGGTGCCATGCTGCCTCCTTCAGAGCCCTCATACTTGTTaGTGTGCTTACTGTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LGMGHSLHLTLVPCCLLQSPHTC*CAYCSS Trigger: TGAAGAACAGTAAGCACACCAACAAGTATGAGGGCT...CTGAAGGAGGCAGCATGGCACCAGTGTCAGGTGGAGACTGTGCCCCATGCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015427.13 ENSMUST00000114141.8 ENSMUST00000114142.8 ENSMUST00000114143.10 |
||
| 3UTR CAA 72 bp | GGATACCAGTGCAGTGCCTCTGGGAGGGAGAGTTTCTaGAAGATGTCCCAACCTACCCAATACCTGCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GYQCSASGRESF*KMSQPTQYLLQ Trigger: CTGGAGCAGGTATTGGGTAGGTTGGGACATCTTCAAGAAACTCTCCCTCCCAGAGGCACTGCACTGGTATCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015427.13 ENSMUST00000114142.8 ENSMUST00000114143.10 |
||
| CDS-3UTR GCA 90 bp | GCCTCATGCCTGGGCATGGGGCACAGTCTCCACCTGACACTGGTGCCATGCTGCTCATACTTGTTGGTGTaGTTACTGTTCTTCATATGC | + |
|
Preference number: 4 (lower is better) Translates to: ASCLGMGHSLHLTLVPCCSYLLV*LLFFIC Trigger: GCATATGAAGAACAGTAAGCACACCAACAAGTATGA...GCAGCATGGCACCAGTGTCAGGTGGAGACTGTGCCCCATGCCCAGGCATGAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015427.13 ENSMUST00000114141.8 ENSMUST00000114142.8 ENSMUST00000114143.10 |
||
| CDS-3UTR GCA 90 bp | CCTAATGTGTTAGGGAGGGGGAGCCTCATGCCTGGGCATGGGGCACAGTCTCCAATCAAGAGAAAGAACTaGATTCACCAGGGCGATGTT | + |
|
Preference number: 4 (lower is better) Translates to: PNVLGRGSLMPGHGAQSPIKRKN*IHQGDV Trigger: AACATCGCCCTGGTGAATGCAGTTCTTTCTCTTGAT...TGGAGACTGTGCCCCATGCCCAGGCATGAGGCTCCCCCTCCCTAACACATTAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114141.8 |
||
| CDS-3UTR CCA 90 bp | GGCATGGGGCACAGTCTCCACCTGACACTGGTGCCATGCTGCCTCCTTCAGTCTATTCATCTTGGTAGCTaGATCATCATAGGAAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GMGHSLHLTLVPCCLLQSIHLGS*IIIGSH Trigger: GTGGCTTCCTATGATGATCCAGCTACCAAGATGAAT...AGACTGAAGGAGGCAGCATGGCACCAGTGTCAGGTGGAGACTGTGCCCCATGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015427.13 ENSMUST00000114141.8 ENSMUST00000114142.8 ENSMUST00000114143.10 |
||
| CDS-3UTR CCA 90 bp | CAGTGCCTCTGGGAGGGAGAGTTTCTTGAAGATGTCCCAACCTACCCAATACCTGGAAGGCTAGATCCTTaGCATTCCTGCTGCCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QCLWEGEFLEDVPTYPIPGRLDP*HSCCPA Trigger: AGCTGGGCAGCAGGAATGCCAAGGATCTAGCCTTCC...AGGTATTGGGTAGGTTGGGACATCTTCAAGAAACTCTCCCTCCCAGAGGCACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015427.13 ENSMUST00000114142.8 ENSMUST00000114143.10 |
||
| 3UTR CAA 72 bp | AGAGGGCAGGATTTCAGGGAGAAAATATACAGTAGGTaGCTGTGGTGGGCCACTCACCTCCAGCCCACATGT | + |
|
Preference number: 4 (lower is better) Translates to: RGQDFREKIYSR*LWWATHLQPTC Trigger: ACATGTGGGCTGGAGGTGAGTGGCCCACCACAGCAACCTACTGTATATTTTCTCCCTGAAATCCTGCCCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141604.2 |
||
| CDS-3UTR TCA 90 bp | GCCTCTGGGAGGGAGAGTTTCTTGAAGATGTCCCAACCTACCCAATACCTGCTCAGTTCTCTGGGCTGGTaGAGAACTGCTGAATTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: ASGRESFLKMSQPTQYLLSSLGW*RTAEFE Trigger: CTCGAATTCAGCAGTTCTTCACCAGCCCAGAGAACT...GAGCAGGTATTGGGTAGGTTGGGACATCTTCAAGAAACTCTCCCTCCCAGAGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015427.13 ENSMUST00000114142.8 ENSMUST00000114143.10 |
||
| CDS-3UTR TCA 90 bp | TGCAGTGCCTCTGGGAGGGAGAGTTTCTTGAAGATGTCCCAACCTACCCAATACTGGTTCTGCAGTCACTaGGTTCTCTGGGCTGGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: CSASGRESFLKMSQPTQYWFCSH*VLWAGE Trigger: TTCACCAGCCCAGAGAACTCAGTGACTGCAGAACCA...GTATTGGGTAGGTTGGGACATCTTCAAGAAACTCTCCCTCCCAGAGGCACTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015427.13 ENSMUST00000114142.8 ENSMUST00000114143.10 |
||
| CDS-3UTR CCA 90 bp | ATCACTGAAAACAGGGTTGGATACCAGTGCAGTGCCTCTGGGAGGGAGAGTTTCTGTTCTGCACACCTTTaGCTCCCACAAACACCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ITENRVGYQCSASGRESFCSAHL*LPQTPS Trigger: GCTGGGTGTTTGTGGGAGCCAAAGGTGTGCAGAACA...GAAACTCTCCCTCCCAGAGGCACTGCACTGGTATCCAACCCTGTTTTCAGTGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015427.13 ENSMUST00000114142.8 ENSMUST00000114143.10 |
||
| CDS-3UTR TCA 90 bp | CTCTGGGAGGGAGAGTTTCTTGAAGATGTCCCAACCTACCCAATACCTGCTCCAAGTTCTCTGGGCTGGTaGAGAACTGCTGAATTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: LWEGEFLEDVPTYPIPAPSSLGW*RTAEFE Trigger: CTCGAATTCAGCAGTTCTTCACCAGCCCAGAGAACT...TGGAGCAGGTATTGGGTAGGTTGGGACATCTTCAAGAAACTCTCCCTCCCAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015427.13 ENSMUST00000114142.8 ENSMUST00000114143.10 |
||
| CDS-3UTR GCA 90 bp | ATCACTGAAAACAGGGTTGGATACCAGTGCAGTGCCTCTGGGAGGGAGAGTTTCATTCGAAAGCTCAGGTaGTCTTCAGGACAAGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ITENRVGYQCSASGRESFIRKLR*SSGQGW Trigger: CCAGCCTTGTCCTGAAGAGCACCTGAGCTTTCGAAT...GAAACTCTCCCTCCCAGAGGCACTGCACTGGTATCCAACCCTGTTTTCAGTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015427.13 ENSMUST00000114142.8 ENSMUST00000114143.10 |
||
| CDS-3UTR GCA 90 bp | ATGGGGCACAGTCTCCACCTGACACTGGTGCCATGCTGCCTCCTTCAGTCTGGTTCATACTTGTTGGTGTaGTTACTGTTCTTCATATGC | + |
|
Preference number: 4 (lower is better) Translates to: MGHSLHLTLVPCCLLQSGSYLLV*LLFFIC Trigger: GCATATGAAGAACAGTAAGCACACCAACAAGTATGA...ACCAGACTGAAGGAGGCAGCATGGCACCAGTGTCAGGTGGAGACTGTGCCCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015427.13 ENSMUST00000114141.8 ENSMUST00000114142.8 ENSMUST00000114143.10 |
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| CDS-3UTR TCA 90 bp | ATCCAATCAGTTCTGATTTGGCTTAAAGGATCACTGAAAACAGGGTTGGATACCCTAGGAGCTCACCACTaGCCCCATTCACCAGGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: IQSVLIWLKGSLKTGLDTLGAHH*PHSPGR Trigger: TCGCCCTGGTGAATGGGGTCAGTGGTGAGCTCCTAG...GGTATCCAACCCTGTTTTCAGTGATCCTTTAAGCCAAATCAGAACTGATTGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015427.13 ENSMUST00000114142.8 ENSMUST00000114143.10 |
||
| CDS-3UTR TCA 90 bp | CCATCCCTTGTATTTTGTAAATCCAAGGCAATACTTGAACAGCTAAGTGCAAAGCTAGGAGCTCACCACTaGCCCCATTCACCAGGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: PSLVFCKSKAILEQLSAKLGAHH*PHSPGR Trigger: TCGCCCTGGTGAATGGGGTCAGTGGTGAGCTCCTAG...CTTTGCACTTAGCTGTTCAAGTATTGCCTTGGATTTACAAAATACAAGGGATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114138.8 |
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| CDS-3UTR CCA 90 bp | TCCCTTGTATTTTGTAAATCCAAGGCAATACTTGAACAGCTAAGTGCAAAGACAAGTAGGTTGCTGTGGTaGGCCACTCACCTCCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SLVFCKSKAILEQLSAKTSRLLW*ATHLQP Trigger: GGGCTGGAGGTGAGTGGCCCACCACAGCAACCTACT...TGTCTTTGCACTTAGCTGTTCAAGTATTGCCTTGGATTTACAAAATACAAGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114138.8 |
||
| CDS-3UTR TCA 90 bp | TCCCCATCCCTTGTATTTTGTAAATCCAAGGCAATACTTGAACAGCTAAGTGCATGGTTCTGCAGTCACTaGGTTCTCTGGGCTGGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SPSLVFCKSKAILEQLSAWFCSH*VLWAGE Trigger: TTCACCAGCCCAGAGAACTCAGTGACTGCAGAACCA...TGCACTTAGCTGTTCAAGTATTGCCTTGGATTTACAAAATACAAGGGATGGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114138.8 |
||
| CDS-3UTR GCA 90 bp | ATCCAATCAGTTCTGATTTGGCTTAAAGGATCACTGAAAACAGGGTTGGATACCAAGGGGCTCTTGTTCTaGACACCTTTGGCTCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: IQSVLIWLKGSLKTGLDTKGLLF*TPLAPT Trigger: TGTGGGAGCCAAAGGTGTGCAGAACAAGAGCCCCTT...GGTATCCAACCCTGTTTTCAGTGATCCTTTAAGCCAAATCAGAACTGATTGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015427.13 ENSMUST00000114142.8 ENSMUST00000114143.10 |
||
| CDS-3UTR GCA 90 bp | CTCTGGGAGGGAGAGTTTCTTGAAGATGTCCCAACCTACCCAATACCTGCTCCATCATACTTGTTGGTGTaGTTACTGTTCTTCATATGC | + |
|
Preference number: 4 (lower is better) Translates to: LWEGEFLEDVPTYPIPAPSYLLV*LLFFIC Trigger: GCATATGAAGAACAGTAAGCACACCAACAAGTATGA...TGGAGCAGGTATTGGGTAGGTTGGGACATCTTCAAGAAACTCTCCCTCCCAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015427.13 ENSMUST00000114142.8 ENSMUST00000114143.10 |
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| CDS-3UTR CCA 90 bp | CATTTAGAAGGTGAGCCCTCTGACAGACACCTTGTGAGGAACTCTGATTGGACTAGCCCTCATACTTGTTaGTGTGCTTACTGTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: HLEGEPSDRHLVRNSDWTSPHTC*CAYCSS Trigger: TGAAGAACAGTAAGCACACCAACAAGTATGAGGGCT...AGTCCAATCAGAGTTCCTCACAAGGTGTCTGTCAGAGGGCTCACCTTCTAAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015427.13 ENSMUST00000114142.8 ENSMUST00000114143.10 |
||
| CDS-3UTR GCA 90 bp | CTTGCAGAAGTCATCCAATCAGTTCTGATTTGGCTTAAAGGATCACTGAAAACAAAGGGGCTCTTGTTCTaGACACCTTTGGCTCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: LAEVIQSVLIWLKGSLKTKGLLF*TPLAPT Trigger: TGTGGGAGCCAAAGGTGTGCAGAACAAGAGCCCCTT...TGTTTTCAGTGATCCTTTAAGCCAAATCAGAACTGATTGGATGACTTCTGCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015427.13 ENSMUST00000114142.8 ENSMUST00000114143.10 |
||
| CDS-3UTR GCA 90 bp | AGGCCAGATTGCTCCATTCAGGCTTGCAGAAGTCATCCAATCAGTTCTGATTTGTTACTGTTCTTCATATaGTGCTCAAAGGGGCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RPDCSIQACRSHPISSDLLLFFI*CSKGLL Trigger: CAAGAGCCCCTTTGAGCAGCATATGAAGAACAGTAA...CAAATCAGAACTGATTGGATGACTTCTGCAAGCCTGAATGGAGCAATCTGGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015427.13 ENSMUST00000114142.8 ENSMUST00000114143.10 |
||
| CDS-3UTR CCA 90 bp | CTTGTATTTTGTAAATCCAAGGCAATACTTGAACAGCTAAGTGCAAAGACAGAGTACAGTAGGTTGCTGTaGTGGGCCACTCACCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LVFCKSKAILEQLSAKTEYSRLL*WATHLQ Trigger: CTGGAGGTGAGTGGCCCACCACAGCAACCTACTGTA...CTCTGTCTTTGCACTTAGCTGTTCAAGTATTGCCTTGGATTTACAAAATACAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114138.8 |
||
| CDS-3UTR TCA 90 bp | CAGATTTCCCCATCCCTTGTATTTTGTAAATCCAAGGCAATACTTGAACAGCTAAGTTCTCTGGGCTGGTaGAGAACTGCTGAATTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: QISPSLVFCKSKAILEQLSSLGW*RTAEFE Trigger: CTCGAATTCAGCAGTTCTTCACCAGCCCAGAGAACT...TAGCTGTTCAAGTATTGCCTTGGATTTACAAAATACAAGGGATGGGGAAATCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114138.8 ENSMUST00000141604.2 |
||
| CDS-3UTR GCA 90 bp | CCATCCCTTGTATTTTGTAAATCCAAGGCAATACTTGAACAGCTAAGTGCAAAGATTCGAAAGCTCAGGTaGTCTTCAGGACAAGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PSLVFCKSKAILEQLSAKIRKLR*SSGQGW Trigger: CCAGCCTTGTCCTGAAGAGCACCTGAGCTTTCGAAT...CTTTGCACTTAGCTGTTCAAGTATTGCCTTGGATTTACAAAATACAAGGGATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114138.8 |
||
| CDS-3UTR GCA 90 bp | CTTGTATTTTGTAAATCCAAGGCAATACTTGAACAGCTAAGTGCAAAGACAGAGAAATATACAGTAGGTTaGTGTGGTGGGCCACTCACC | + |
|
Preference number: 4 (lower is better) Translates to: LVFCKSKAILEQLSAKTEKYTVG*CGGPLT Trigger: GGTGAGTGGCCCACCACAGCAACCTACTGTATATTT...CTCTGTCTTTGCACTTAGCTGTTCAAGTATTGCCTTGGATTTACAAAATACAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114138.8 |
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| CDS-3UTR CCA 90 bp | ATCCAATCAGTTCTGATTTGGCTTAAAGGATCACTGAAAACAGGGTTGGATACCAGCCCTCATACTTGTTaGTGTGCTTACTGTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: IQSVLIWLKGSLKTGLDTSPHTC*CAYCSS Trigger: TGAAGAACAGTAAGCACACCAACAAGTATGAGGGCT...GGTATCCAACCCTGTTTTCAGTGATCCTTTAAGCCAAATCAGAACTGATTGGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015427.13 ENSMUST00000114142.8 ENSMUST00000114143.10 |
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| CDS-3UTR CAA 90 bp | CTGGGCATGGGGCACAGTCTCCACCTGACACTGGTGCCATGCTGCCTCCTTCAGTGGGGCAGGCCGCATTaGTACTTCCTGGCCCTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: LGMGHSLHLTLVPCCLLQWGRPH*YFLALG Trigger: ACCAAGGGCCAGGAAGTACAAATGCGGCCTGCCCCA...CTGAAGGAGGCAGCATGGCACCAGTGTCAGGTGGAGACTGTGCCCCATGCCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000015427.13 ENSMUST00000114141.8 ENSMUST00000114142.8 ENSMUST00000114143.10 |
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| CDS-3UTR CAA 90 bp | GGGCATGGGGCACAGTCTCCACCTGACACTGGTGCCATGCTGCCTCCTTCAGTCTGGGGCAGGCCGCATTaGTACTTCCTGGCCCTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: GHGAQSPPDTGAMLPPSVWGRPH*YFLALG Trigger: ACCAAGGGCCAGGAAGTACAAATGCGGCCTGCCCCA...GACTGAAGGAGGCAGCATGGCACCAGTGTCAGGTGGAGACTGTGCCCCATGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000015427.13 ENSMUST00000114141.8 ENSMUST00000114142.8 ENSMUST00000114143.10 |
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| CDS-3UTR CAA 90 bp | GGGAGCCTCATGCCTGGGCATGGGGCACAGTCTCCACCTGACACTGGTGCCATGTTGGGCCCGATGACATaGGCAGCCCCGCTGACTATT | + |
|
Preference number: 5 (lower is better) Translates to: GSLMPGHGAQSPPDTGAMLGPMT*AAPLTI Trigger: AATAGTCAGCGGGGCTGCCAATGTCATCGGGCCCAA...CATGGCACCAGTGTCAGGTGGAGACTGTGCCCCATGCCCAGGCATGAGGCTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000015427.13 ENSMUST00000114141.8 ENSMUST00000114142.8 ENSMUST00000114143.10 |
||
| CDS-3UTR CAA 90 bp | GTGTTAGGGAGGGGGAGCCTCATGCCTGGGCATGGGGCACAGTCTCCACCTGACTTGGGCCCGATGACATaGGCAGCCCCGCTGACTATT | + |
|
Preference number: 5 (lower is better) Translates to: VLGRGSLMPGHGAQSPPDLGPMT*AAPLTI Trigger: AATAGTCAGCGGGGCTGCCAATGTCATCGGGCCCAA...GTCAGGTGGAGACTGTGCCCCATGCCCAGGCATGAGGCTCCCCCTCCCTAACAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000015427.13 ENSMUST00000114141.8 ENSMUST00000114142.8 ENSMUST00000114143.10 |
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| CDS-3UTR CAA 90 bp | GCCTCATGCCTGGGCATGGGGCACAGTCTCCACCTGACACTGGTGCCATGCTGCAGGCCACGGCCCACATaGTCTTTGACGCTGCTCATG | + |
|
Preference number: 5 (lower is better) Translates to: ASCLGMGHSLHLTLVPCCRPRPT*SLTLLM Trigger: CATGAGCAGCGTCAAAGACAATGTGGGCCGTGGCCT...GCAGCATGGCACCAGTGTCAGGTGGAGACTGTGCCCCATGCCCAGGCATGAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015427.13 ENSMUST00000114141.8 ENSMUST00000114142.8 ENSMUST00000114143.10 |
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| CDS-3UTR CAA 90 bp | GGGCATGGGGCACAGTCTCCACCTGACACTGGTGCCATGCTGCCTCCTTCAGTCCGGAAGGCTAGATCCTaGGCATTCCTGCTGCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GHGAQSPPDTGAMLPPSVRKARS*AFLLPS Trigger: GCTGGGCAGCAGGAATGCCAAGGATCTAGCCTTCCG...GACTGAAGGAGGCAGCATGGCACCAGTGTCAGGTGGAGACTGTGCCCCATGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015427.13 ENSMUST00000114141.8 ENSMUST00000114142.8 ENSMUST00000114143.10 |
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| CDS-3UTR CAA 90 bp | ATGCCTGGGCATGGGGCACAGTCTCCACCTGACACTGGTGCCATGCTGCCTCCTCGGAAGGCTAGATCCTaGGCATTCCTGCTGCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: MPGHGAQSPPDTGAMLPPRKARS*AFLLPS Trigger: GCTGGGCAGCAGGAATGCCAAGGATCTAGCCTTCCG...AGGAGGCAGCATGGCACCAGTGTCAGGTGGAGACTGTGCCCCATGCCCAGGCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015427.13 ENSMUST00000114141.8 ENSMUST00000114142.8 ENSMUST00000114143.10 |
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| CDS-3UTR CAA 90 bp | CCTAATGTGTTAGGGAGGGGGAGCCTCATGCCTGGGCATGGGGCACAGTCTCCATGGGGCAGGCCGCATTaGTACTTCCTGGCCCTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: PNVLGRGSLMPGHGAQSPWGRPH*YFLALG Trigger: ACCAAGGGCCAGGAAGTACAAATGCGGCCTGCCCCA...TGGAGACTGTGCCCCATGCCCAGGCATGAGGCTCCCCCTCCCTAACACATTAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000015427.13 ENSMUST00000114141.8 ENSMUST00000114142.8 ENSMUST00000114143.10 |
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| CDS-3UTR CAA 90 bp | GGGCATGGGGCACAGTCTCCACCTGACACTGGTGCCATGCTGCCTCCTTCAGTCTCCTCGAGGCAGATCTaGGGCCCGATGACATTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: GHGAQSPPDTGAMLPPSVSSRQI*GPMTLA Trigger: TGCCAATGTCATCGGGCCCAAGATCTGCCTCGAGGA...GACTGAAGGAGGCAGCATGGCACCAGTGTCAGGTGGAGACTGTGCCCCATGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015427.13 ENSMUST00000114141.8 ENSMUST00000114142.8 ENSMUST00000114143.10 |
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| CDS-3UTR CAA 90 bp | ATGCCTGGGCATGGGGCACAGTCTCCACCTGACACTGGTGCCATGCTGCCTCCTAGGCCACGGCCCACATaGTCTTTGACGCTGCTCATG | + |
|
Preference number: 5 (lower is better) Translates to: MPGHGAQSPPDTGAMLPPRPRPT*SLTLLM Trigger: CATGAGCAGCGTCAAAGACAATGTGGGCCGTGGCCT...AGGAGGCAGCATGGCACCAGTGTCAGGTGGAGACTGTGCCCCATGCCCAGGCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015427.13 ENSMUST00000114141.8 ENSMUST00000114142.8 ENSMUST00000114143.10 |
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| CDS-3UTR CAA 90 bp | CTTTCAAGCCCTAATGTGTTAGGGAGGGGGAGCCTCATGCCTGGGCATGGGGCATGGGGCAGGCCGCATTaGTACTTCCTGGCCCTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: LSSPNVLGRGSLMPGHGAWGRPH*YFLALG Trigger: ACCAAGGGCCAGGAAGTACAAATGCGGCCTGCCCCA...TGCCCCATGCCCAGGCATGAGGCTCCCCCTCCCTAACACATTAGGGCTTGAAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000015427.13 ENSMUST00000114141.8 ENSMUST00000114142.8 ENSMUST00000114143.10 |
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| CDS-3UTR CAA 90 bp | TGGGCCAGCCCTGCAGCCCCCATCACCTTGAGGCCACTTTCAAGCCCTAATGTGTTGGGCCCGATGACATaGGCAGCCCCGCTGACTATT | + |
|
Preference number: 5 (lower is better) Translates to: WASPAAPITLRPLSSPNVLGPMT*AAPLTI Trigger: AATAGTCAGCGGGGCTGCCAATGTCATCGGGCCCAA...CACATTAGGGCTTGAAAGTGGCCTCAAGGTGATGGGGGCTGCAGGGCTGGCCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000015427.13 ENSMUST00000114142.8 ENSMUST00000114143.10 |
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| CDS-3UTR CAA 90 bp | GGCATGGGGCACAGTCTCCACCTGACACTGGTGCCATGCTGCCTCCTTCAGTCTTCCTCGAGGCAGATCTaGGGCCCGATGACATTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: GMGHSLHLTLVPCCLLQSSSRQI*GPMTLA Trigger: TGCCAATGTCATCGGGCCCAAGATCTGCCTCGAGGA...AGACTGAAGGAGGCAGCATGGCACCAGTGTCAGGTGGAGACTGTGCCCCATGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015427.13 ENSMUST00000114141.8 ENSMUST00000114142.8 ENSMUST00000114143.10 |
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| CDS-3UTR CAA 90 bp | CCTAATGTGTTAGGGAGGGGGAGCCTCATGCCTGGGCATGGGGCACAGTCTCCATCCTCGAGGCAGATCTaGGGCCCGATGACATTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: PNVLGRGSLMPGHGAQSPSSRQI*GPMTLA Trigger: TGCCAATGTCATCGGGCCCAAGATCTGCCTCGAGGA...TGGAGACTGTGCCCCATGCCCAGGCATGAGGCTCCCCCTCCCTAACACATTAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000015427.13 ENSMUST00000114141.8 ENSMUST00000114142.8 ENSMUST00000114143.10 |
||
| CDS-3UTR CAA 90 bp | GGGAGCCTCATGCCTGGGCATGGGGCACAGTCTCCACCTGACACTGGTGCCATGCTGCTCATGAGCATCTaGTCCTCGAGGCAGATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GSLMPGHGAQSPPDTGAMLLMSI*SSRQIL Trigger: CAAGATCTGCCTCGAGGACAAGATGCTCATGAGCAG...CATGGCACCAGTGTCAGGTGGAGACTGTGCCCCATGCCCAGGCATGAGGCTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015427.13 ENSMUST00000114141.8 ENSMUST00000114142.8 ENSMUST00000114143.10 |
||
| CDS-3UTR CAA 90 bp | AGCCCTAATGTGTTAGGGAGGGGGAGCCTCATGCCTGGGCATGGGGCACAGTCTAGGCCACGGCCCACATaGTCTTTGACGCTGCTCATG | + |
|
Preference number: 5 (lower is better) Translates to: SPNVLGRGSLMPGHGAQSRPRPT*SLTLLM Trigger: CATGAGCAGCGTCAAAGACAATGTGGGCCGTGGCCT...AGACTGTGCCCCATGCCCAGGCATGAGGCTCCCCCTCCCTAACACATTAGGGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000015427.13 ENSMUST00000114141.8 ENSMUST00000114142.8 ENSMUST00000114143.10 |
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| CDS-3UTR CAA 90 bp | GGGAGCCTCATGCCTGGGCATGGGGCACAGTCTCCACCTGACACTGGTGCCATGTTGTTCTGCACACCTTaGGCTCCCACAAACACCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GSLMPGHGAQSPPDTGAMLFCTP*APTNTQ Trigger: CTGGGTGTTTGTGGGAGCCAAAGGTGTGCAGAACAA...CATGGCACCAGTGTCAGGTGGAGACTGTGCCCCATGCCCAGGCATGAGGCTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015427.13 ENSMUST00000114141.8 ENSMUST00000114142.8 ENSMUST00000114143.10 |
||
| CDS-3UTR CAA 90 bp | GTGTTAGGGAGGGGGAGCCTCATGCCTGGGCATGGGGCACAGTCTCCACCTGACTGCTCAAAGGGGCTCTaGTTCTGCACACCTTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: VLGRGSLMPGHGAQSPPDCSKGL*FCTPLA Trigger: AGCCAAAGGTGTGCAGAACAAGAGCCCCTTTGAGCA...GTCAGGTGGAGACTGTGCCCCATGCCCAGGCATGAGGCTCCCCCTCCCTAACAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000015427.13 ENSMUST00000114141.8 ENSMUST00000114142.8 ENSMUST00000114143.10 |
||
| CDS-3UTR CAA 90 bp | GCAGCCCCCATCACCTTGAGGCCACTTTCAAGCCCTAATGTGTTAGGGAGGGGGTTGGGCCCGATGACATaGGCAGCCCCGCTGACTATT | + |
|
Preference number: 5 (lower is better) Translates to: AAPITLRPLSSPNVLGRGLGPMT*AAPLTI Trigger: AATAGTCAGCGGGGCTGCCAATGTCATCGGGCCCAA...CCCCCTCCCTAACACATTAGGGCTTGAAAGTGGCCTCAAGGTGATGGGGGCTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000015427.13 ENSMUST00000114142.8 ENSMUST00000114143.10 |
||
| CDS-3UTR CAA 90 bp | AGTCTCCACCTGACACTGGTGCCATGCTGCCTCCTTCAGTCTGGTCCCAGAGCTTCCTCGAGGCAGATCTaGGGCCCGATGACATTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SLHLTLVPCCLLQSGPRASSRQI*GPMTLA Trigger: TGCCAATGTCATCGGGCCCAAGATCTGCCTCGAGGA...AGCTCTGGGACCAGACTGAAGGAGGCAGCATGGCACCAGTGTCAGGTGGAGACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000015427.13 ENSMUST00000114141.8 ENSMUST00000114142.8 ENSMUST00000114143.10 |
||
| CDS-3UTR CAA 90 bp | GGCATGGGGCACAGTCTCCACCTGACACTGGTGCCATGCTGCCTCCTTCAGTCTCGGCCCACATTGTCTTaGACGCTGCTCATGAGCATC | + |
|
Preference number: 5 (lower is better) Translates to: GMGHSLHLTLVPCCLLQSRPTLS*TLLMSI Trigger: GATGCTCATGAGCAGCGTCAAAGACAATGTGGGCCG...AGACTGAAGGAGGCAGCATGGCACCAGTGTCAGGTGGAGACTGTGCCCCATGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015427.13 ENSMUST00000114141.8 ENSMUST00000114142.8 ENSMUST00000114143.10 |
||
| CDS-3UTR CAA 90 bp | GGGCATGGGGCACAGTCTCCACCTGACACTGGTGCCATGCTGCCTCCTTCAGTCTTGTTCTGCACACCTTaGGCTCCCACAAACACCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GHGAQSPPDTGAMLPPSVLFCTP*APTNTQ Trigger: CTGGGTGTTTGTGGGAGCCAAAGGTGTGCAGAACAA...GACTGAAGGAGGCAGCATGGCACCAGTGTCAGGTGGAGACTGTGCCCCATGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015427.13 ENSMUST00000114141.8 ENSMUST00000114142.8 ENSMUST00000114143.10 |
||
| CDS-3UTR CAA 90 bp | CTGGGCATGGGGCACAGTCTCCACCTGACACTGGTGCCATGCTGCCTCCTTCAGGGCCAGCCCTCATACTaGTTGGTGTGCTTACTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: LGMGHSLHLTLVPCCLLQGQPSY*LVCLLF Trigger: GAACAGTAAGCACACCAACAAGTATGAGGGCTGGCC...CTGAAGGAGGCAGCATGGCACCAGTGTCAGGTGGAGACTGTGCCCCATGCCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015427.13 ENSMUST00000114141.8 ENSMUST00000114142.8 ENSMUST00000114143.10 |
||
| CDS-3UTR CAA 90 bp | CCTAATGTGTTAGGGAGGGGGAGCCTCATGCCTGGGCATGGGGCACAGTCTCCATGTACTTCCTGGCCCTaGGTTCTGCAGTCACTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: PNVLGRGSLMPGHGAQSPCTSWP*VLQSLS Trigger: ACTCAGTGACTGCAGAACCAAGGGCCAGGAAGTACA...TGGAGACTGTGCCCCATGCCCAGGCATGAGGCTCCCCCTCCCTAACACATTAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000015427.13 ENSMUST00000114141.8 ENSMUST00000114142.8 ENSMUST00000114143.10 |
||
| CDS-3UTR CAA 90 bp | AGCCCTAATGTGTTAGGGAGGGGGAGCCTCATGCCTGGGCATGGGGCACAGTCTTGTACTTCCTGGCCCTaGGTTCTGCAGTCACTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: SPNVLGRGSLMPGHGAQSCTSWP*VLQSLS Trigger: ACTCAGTGACTGCAGAACCAAGGGCCAGGAAGTACA...AGACTGTGCCCCATGCCCAGGCATGAGGCTCCCCCTCCCTAACACATTAGGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000015427.13 ENSMUST00000114141.8 ENSMUST00000114142.8 ENSMUST00000114143.10 |
||
| CDS-3UTR CAA 90 bp | CCTAATGTGTTAGGGAGGGGGAGCCTCATGCCTGGGCATGGGGCACAGTCTCCACTGCTCATGAGCATCTaGTCCTCGAGGCAGATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: PNVLGRGSLMPGHGAQSPLLMSI*SSRQIL Trigger: CAAGATCTGCCTCGAGGACAAGATGCTCATGAGCAG...TGGAGACTGTGCCCCATGCCCAGGCATGAGGCTCCCCCTCCCTAACACATTAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000015427.13 ENSMUST00000114141.8 ENSMUST00000114142.8 ENSMUST00000114143.10 |
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| CDS-3UTR CAA 90 bp | CTTTCAAGCCCTAATGTGTTAGGGAGGGGGAGCCTCATGCCTGGGCATGGGGCACGGCCCACATTGTCTTaGACGCTGCTCATGAGCATC | + |
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Preference number: 5 (lower is better) Translates to: LSSPNVLGRGSLMPGHGARPTLS*TLLMSI Trigger: GATGCTCATGAGCAGCGTCAAAGACAATGTGGGCCG...TGCCCCATGCCCAGGCATGAGGCTCCCCCTCCCTAACACATTAGGGCTTGAAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000015427.13 ENSMUST00000114141.8 ENSMUST00000114142.8 ENSMUST00000114143.10 |
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| CDS-3UTR CAA 90 bp | GGCATGGGGCACAGTCTCCACCTGACACTGGTGCCATGCTGCCTCCTTCAGTCTGGCCAGCCCTCATACTaGTTGGTGTGCTTACTGTTC | + |
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Preference number: 5 (lower is better) Translates to: GMGHSLHLTLVPCCLLQSGQPSY*LVCLLF Trigger: GAACAGTAAGCACACCAACAAGTATGAGGGCTGGCC...AGACTGAAGGAGGCAGCATGGCACCAGTGTCAGGTGGAGACTGTGCCCCATGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015427.13 ENSMUST00000114141.8 ENSMUST00000114142.8 ENSMUST00000114143.10 |
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| CDS TCA 90 bp | GGGCAGGCCGCATTTGTACTTCCTGGCCCTTGGTTCTGCAGTCACTaGGTTCTCTGGGCTGGTGAAGAACTGCTGAATTCGAGGAAGGCC | + |
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Preference number: 5 (lower is better) Translates to: GQAAFVLPGPWFCSH*VLWAGEELLNSRKA Trigger: GGCCTTCCTCGAATTCAGCAGTTCTTCACCAGCCCAGAGAACTCAGTGACTGCAGAACCAAGGGCCAGGAAGTACAAATGCGGCCTGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000015427.13 ENSMUST00000114138.8 ENSMUST00000114141.8 ENSMUST00000114142.8 ENSMUST00000114143.10 ENSMUST00000122894.8 |
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| CDS-3UTR CAA 90 bp | ATGGGGCACAGTCTCCACCTGACACTGGTGCCATGCTGCCTCCTTCAGTCTGGTTTGTTCTGCACACCTTaGGCTCCCACAAACACCCAG | + |
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Preference number: 5 (lower is better) Translates to: MGHSLHLTLVPCCLLQSGLFCTP*APTNTQ Trigger: CTGGGTGTTTGTGGGAGCCAAAGGTGTGCAGAACAA...ACCAGACTGAAGGAGGCAGCATGGCACCAGTGTCAGGTGGAGACTGTGCCCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015427.13 ENSMUST00000114141.8 ENSMUST00000114142.8 ENSMUST00000114143.10 |
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| CDS-3UTR CAA 90 bp | ATGGGGCACAGTCTCCACCTGACACTGGTGCCATGCTGCCTCCTTCAGTCTGGTTGCTCAAAGGGGCTCTaGTTCTGCACACCTTTGGCT | + |
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Preference number: 5 (lower is better) Translates to: MGHSLHLTLVPCCLLQSGCSKGL*FCTPLA Trigger: AGCCAAAGGTGTGCAGAACAAGAGCCCCTTTGAGCA...ACCAGACTGAAGGAGGCAGCATGGCACCAGTGTCAGGTGGAGACTGTGCCCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000015427.13 ENSMUST00000114141.8 ENSMUST00000114142.8 ENSMUST00000114143.10 |
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| CDS-3UTR CAA 90 bp | AGTCTCCACCTGACACTGGTGCCATGCTGCCTCCTTCAGTCTGGTCCCAGAGCTGGCCAGCCCTCATACTaGTTGGTGTGCTTACTGTTC | + |
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Preference number: 5 (lower is better) Translates to: SLHLTLVPCCLLQSGPRAGQPSY*LVCLLF Trigger: GAACAGTAAGCACACCAACAAGTATGAGGGCTGGCC...AGCTCTGGGACCAGACTGAAGGAGGCAGCATGGCACCAGTGTCAGGTGGAGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000015427.13 ENSMUST00000114141.8 ENSMUST00000114142.8 ENSMUST00000114143.10 |
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| CDS-3UTR CAA 90 bp | CTGGGCATGGGGCACAGTCTCCACCTGACACTGGTGCCATGCTGCCTCCTTCAGAACTTCAAGAGATCATaGACATCTCCAGCCCACATG | + |
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Preference number: 5 (lower is better) Translates to: LGMGHSLHLTLVPCCLLQNFKRS*TSPAHM Trigger: CATGTGGGCTGGAGATGTCAATGATCTCTTGAAGTT...CTGAAGGAGGCAGCATGGCACCAGTGTCAGGTGGAGACTGTGCCCCATGCCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015427.13 ENSMUST00000114141.8 ENSMUST00000114142.8 ENSMUST00000114143.10 |
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| CDS-3UTR CAA 90 bp | CTCTGGGAGGGAGAGTTTCTTGAAGATGTCCCAACCTACCCAATACCTGCTCCACGGAAGGCTAGATCCTaGGCATTCCTGCTGCCCAGC | + |
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Preference number: 5 (lower is better) Translates to: LWEGEFLEDVPTYPIPAPRKARS*AFLLPS Trigger: GCTGGGCAGCAGGAATGCCAAGGATCTAGCCTTCCG...TGGAGCAGGTATTGGGTAGGTTGGGACATCTTCAAGAAACTCTCCCTCCCAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015427.13 ENSMUST00000114142.8 ENSMUST00000114143.10 |
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| CDS TCA 90 bp | ACTTCCTGGCCCTTGGTTCTGCAGTCACTGAGTTCTCTGGGCTGGTaGAGAACTGCTGAATTCGAGGAAGGCCAACACCAGGACCACCTA | + |
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Preference number: 5 (lower is better) Translates to: TSWPLVLQSLSSLGW*RTAEFEEGQHQDHL Trigger: TAGGTGGTCCTGGTGTTGGCCTTCCTCGAATTCAGCAGTTCTTCACCAGCCCAGAGAACTCAGTGACTGCAGAACCAAGGGCCAGGAAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000015427.13 ENSMUST00000114138.8 ENSMUST00000114141.8 ENSMUST00000114142.8 ENSMUST00000114143.10 ENSMUST00000122894.8 |
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| CDS-3UTR CAA 90 bp | TGCAGTGCCTCTGGGAGGGAGAGTTTCTTGAAGATGTCCCAACCTACCCAATACAGGCCACGGCCCACATaGTCTTTGACGCTGCTCATG | + |
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Preference number: 5 (lower is better) Translates to: CSASGRESFLKMSQPTQYRPRPT*SLTLLM Trigger: CATGAGCAGCGTCAAAGACAATGTGGGCCGTGGCCT...GTATTGGGTAGGTTGGGACATCTTCAAGAAACTCTCCCTCCCAGAGGCACTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015427.13 ENSMUST00000114142.8 ENSMUST00000114143.10 |
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| CDS-3UTR CAA 90 bp | AGTCTCCACCTGACACTGGTGCCATGCTGCCTCCTTCAGTCTGGTCCCAGAGCTAACTTCAAGAGATCATaGACATCTCCAGCCCACATG | + |
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Preference number: 5 (lower is better) Translates to: SLHLTLVPCCLLQSGPRANFKRS*TSPAHM Trigger: CATGTGGGCTGGAGATGTCAATGATCTCTTGAAGTT...AGCTCTGGGACCAGACTGAAGGAGGCAGCATGGCACCAGTGTCAGGTGGAGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000015427.13 ENSMUST00000114141.8 ENSMUST00000114142.8 ENSMUST00000114143.10 |
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| CDS-3UTR CAA 90 bp | ATGGGGCACAGTCTCCACCTGACACTGGTGCCATGCTGCCTCCTTCAGTCTGGTAACTTCAAGAGATCATaGACATCTCCAGCCCACATG | + |
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Preference number: 5 (lower is better) Translates to: MGHSLHLTLVPCCLLQSGNFKRS*TSPAHM Trigger: CATGTGGGCTGGAGATGTCAATGATCTCTTGAAGTT...ACCAGACTGAAGGAGGCAGCATGGCACCAGTGTCAGGTGGAGACTGTGCCCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015427.13 ENSMUST00000114141.8 ENSMUST00000114142.8 ENSMUST00000114143.10 |
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| CDS-3UTR CAA 90 bp | GCCTCTGGGAGGGAGAGTTTCTTGAAGATGTCCCAACCTACCCAATACCTGCTCTGCTCAAAGGGGCTCTaGTTCTGCACACCTTTGGCT | + |
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Preference number: 5 (lower is better) Translates to: ASGRESFLKMSQPTQYLLCSKGL*FCTPLA Trigger: AGCCAAAGGTGTGCAGAACAAGAGCCCCTTTGAGCA...GAGCAGGTATTGGGTAGGTTGGGACATCTTCAAGAAACTCTCCCTCCCAGAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015427.13 ENSMUST00000114142.8 ENSMUST00000114143.10 |
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| CDS-3UTR CAA 90 bp | CTCTGGGAGGGAGAGTTTCTTGAAGATGTCCCAACCTACCCAATACCTGCTCCATGTACTTCCTGGCCCTaGGTTCTGCAGTCACTGAGT | + |
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Preference number: 5 (lower is better) Translates to: LWEGEFLEDVPTYPIPAPCTSWP*VLQSLS Trigger: ACTCAGTGACTGCAGAACCAAGGGCCAGGAAGTACA...TGGAGCAGGTATTGGGTAGGTTGGGACATCTTCAAGAAACTCTCCCTCCCAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015427.13 ENSMUST00000114142.8 ENSMUST00000114143.10 |
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| CDS-3UTR CAA 90 bp | CAGTGCCTCTGGGAGGGAGAGTTTCTTGAAGATGTCCCAACCTACCCAATACCTCTGCTCATGAGCATCTaGTCCTCGAGGCAGATCTTG | + |
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Preference number: 5 (lower is better) Translates to: QCLWEGEFLEDVPTYPIPLLMSI*SSRQIL Trigger: CAAGATCTGCCTCGAGGACAAGATGCTCATGAGCAG...AGGTATTGGGTAGGTTGGGACATCTTCAAGAAACTCTCCCTCCCAGAGGCACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015427.13 ENSMUST00000114142.8 ENSMUST00000114143.10 |
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| CDS-3UTR CAA 90 bp | ATCACTGAAAACAGGGTTGGATACCAGTGCAGTGCCTCTGGGAGGGAGAGTTTCCTGCTCATGAGCATCTaGTCCTCGAGGCAGATCTTG | + |
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Preference number: 5 (lower is better) Translates to: ITENRVGYQCSASGRESFLLMSI*SSRQIL Trigger: CAAGATCTGCCTCGAGGACAAGATGCTCATGAGCAG...GAAACTCTCCCTCCCAGAGGCACTGCACTGGTATCCAACCCTGTTTTCAGTGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015427.13 ENSMUST00000114142.8 ENSMUST00000114143.10 |
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| CDS-3UTR CAA 90 bp | TGCAGTGCCTCTGGGAGGGAGAGTTTCTTGAAGATGTCCCAACCTACCCAATACGGCCAGCCCTCATACTaGTTGGTGTGCTTACTGTTC | + |
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Preference number: 5 (lower is better) Translates to: CSASGRESFLKMSQPTQYGQPSY*LVCLLF Trigger: GAACAGTAAGCACACCAACAAGTATGAGGGCTGGCC...GTATTGGGTAGGTTGGGACATCTTCAAGAAACTCTCCCTCCCAGAGGCACTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015427.13 ENSMUST00000114142.8 ENSMUST00000114143.10 |
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| CDS-3UTR CAA 90 bp | CATTTAGAAGGTGAGCCCTCTGACAGACACCTTGTGAGGAACTCTGATTGGACTTGCTCAAAGGGGCTCTaGTTCTGCACACCTTTGGCT | + |
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Preference number: 5 (lower is better) Translates to: HLEGEPSDRHLVRNSDWTCSKGL*FCTPLA Trigger: AGCCAAAGGTGTGCAGAACAAGAGCCCCTTTGAGCA...AGTCCAATCAGAGTTCCTCACAAGGTGTCTGTCAGAGGGCTCACCTTCTAAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015427.13 ENSMUST00000114142.8 ENSMUST00000114143.10 |
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| CDS-3UTR CAA 90 bp | TCCCCATCCCTTGTATTTTGTAAATCCAAGGCAATACTTGAACAGCTAAGTGCATCCTCGAGGCAGATCTaGGGCCCGATGACATTGGCA | + |
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Preference number: 5 (lower is better) Translates to: SPSLVFCKSKAILEQLSASSRQI*GPMTLA Trigger: TGCCAATGTCATCGGGCCCAAGATCTGCCTCGAGGA...TGCACTTAGCTGTTCAAGTATTGCCTTGGATTTACAAAATACAAGGGATGGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114138.8 |
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| CDS-3UTR CAA 90 bp | ATTTCCCCATCCCTTGTATTTTGTAAATCCAAGGCAATACTTGAACAGCTAAGTTGGGGCAGGCCGCATTaGTACTTCCTGGCCCTTGGT | + |
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Preference number: 5 (lower is better) Translates to: ISPSLVFCKSKAILEQLSWGRPH*YFLALG Trigger: ACCAAGGGCCAGGAAGTACAAATGCGGCCTGCCCCA...ACTTAGCTGTTCAAGTATTGCCTTGGATTTACAAAATACAAGGGATGGGGAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000114138.8 |
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| CDS-3UTR CAA 90 bp | ATCCAATCAGTTCTGATTTGGCTTAAAGGATCACTGAAAACAGGGTTGGATACCTGTACTTCCTGGCCCTaGGTTCTGCAGTCACTGAGT | + |
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Preference number: 5 (lower is better) Translates to: IQSVLIWLKGSLKTGLDTCTSWP*VLQSLS Trigger: ACTCAGTGACTGCAGAACCAAGGGCCAGGAAGTACA...GGTATCCAACCCTGTTTTCAGTGATCCTTTAAGCCAAATCAGAACTGATTGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015427.13 ENSMUST00000114142.8 ENSMUST00000114143.10 |
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| CDS-3UTR CAA 90 bp | TCCCTTGTATTTTGTAAATCCAAGGCAATACTTGAACAGCTAAGTGCAAAGACATTGGGCCCGATGACATaGGCAGCCCCGCTGACTATT | + |
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Preference number: 5 (lower is better) Translates to: SLVFCKSKAILEQLSAKTLGPMT*AAPLTI Trigger: AATAGTCAGCGGGGCTGCCAATGTCATCGGGCCCAA...TGTCTTTGCACTTAGCTGTTCAAGTATTGCCTTGGATTTACAAAATACAAGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114138.8 |
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| CDS-3UTR CAA 90 bp | CCATCCCTTGTATTTTGTAAATCCAAGGCAATACTTGAACAGCTAAGTGCAAAGCGGCCCACATTGTCTTaGACGCTGCTCATGAGCATC | + |
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Preference number: 5 (lower is better) Translates to: PSLVFCKSKAILEQLSAKRPTLS*TLLMSI Trigger: GATGCTCATGAGCAGCGTCAAAGACAATGTGGGCCG...CTTTGCACTTAGCTGTTCAAGTATTGCCTTGGATTTACAAAATACAAGGGATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114138.8 |
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| CDS-3UTR CAA 90 bp | CTTGCAGAAGTCATCCAATCAGTTCTGATTTGGCTTAAAGGATCACTGAAAACACGGCCCACATTGTCTTaGACGCTGCTCATGAGCATC | + |
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Preference number: 5 (lower is better) Translates to: LAEVIQSVLIWLKGSLKTRPTLS*TLLMSI Trigger: GATGCTCATGAGCAGCGTCAAAGACAATGTGGGCCG...TGTTTTCAGTGATCCTTTAAGCCAAATCAGAACTGATTGGATGACTTCTGCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015427.13 ENSMUST00000114142.8 ENSMUST00000114143.10 |
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| CDS-3UTR CAA 90 bp | ATTTCCCCATCCCTTGTATTTTGTAAATCCAAGGCAATACTTGAACAGCTAAGTAGGCCACGGCCCACATaGTCTTTGACGCTGCTCATG | + |
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Preference number: 5 (lower is better) Translates to: ISPSLVFCKSKAILEQLSRPRPT*SLTLLM Trigger: CATGAGCAGCGTCAAAGACAATGTGGGCCGTGGCCT...ACTTAGCTGTTCAAGTATTGCCTTGGATTTACAAAATACAAGGGATGGGGAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114138.8 |
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| CDS-3UTR CAA 90 bp | ATCCAATCAGTTCTGATTTGGCTTAAAGGATCACTGAAAACAGGGTTGGATACCTTGTTCTGCACACCTTaGGCTCCCACAAACACCCAG | + |
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Preference number: 5 (lower is better) Translates to: IQSVLIWLKGSLKTGLDTLFCTP*APTNTQ Trigger: CTGGGTGTTTGTGGGAGCCAAAGGTGTGCAGAACAA...GGTATCCAACCCTGTTTTCAGTGATCCTTTAAGCCAAATCAGAACTGATTGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015427.13 ENSMUST00000114142.8 ENSMUST00000114143.10 |
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| CDS-3UTR CAA 90 bp | CAGATTTCCCCATCCCTTGTATTTTGTAAATCCAAGGCAATACTTGAACAGCTATGTACTTCCTGGCCCTaGGTTCTGCAGTCACTGAGT | + |
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Preference number: 5 (lower is better) Translates to: QISPSLVFCKSKAILEQLCTSWP*VLQSLS Trigger: ACTCAGTGACTGCAGAACCAAGGGCCAGGAAGTACA...TAGCTGTTCAAGTATTGCCTTGGATTTACAAAATACAAGGGATGGGGAAATCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114138.8 |
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| CDS-3UTR CAA 90 bp | TCCCTTGTATTTTGTAAATCCAAGGCAATACTTGAACAGCTAAGTGCAAAGACACTGCTCATGAGCATCTaGTCCTCGAGGCAGATCTTG | + |
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Preference number: 5 (lower is better) Translates to: SLVFCKSKAILEQLSAKTLLMSI*SSRQIL Trigger: CAAGATCTGCCTCGAGGACAAGATGCTCATGAGCAG...TGTCTTTGCACTTAGCTGTTCAAGTATTGCCTTGGATTTACAAAATACAAGGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114138.8 |
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| CDS-3UTR CAA 90 bp | ATCCAATCAGTTCTGATTTGGCTTAAAGGATCACTGAAAACAGGGTTGGATACCAACTTCAAGAGATCATaGACATCTCCAGCCCACATG | + |
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Preference number: 5 (lower is better) Translates to: IQSVLIWLKGSLKTGLDTNFKRS*TSPAHM Trigger: CATGTGGGCTGGAGATGTCAATGATCTCTTGAAGTT...GGTATCCAACCCTGTTTTCAGTGATCCTTTAAGCCAAATCAGAACTGATTGGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015427.13 ENSMUST00000114142.8 ENSMUST00000114143.10 |
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| CDS-3UTR CAA 90 bp | ATTTCCCCATCCCTTGTATTTTGTAAATCCAAGGCAATACTTGAACAGCTAAGTAAAATATACAGTAGGTaGCTGTGGTGGGCCACTCAC | + |
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Preference number: 5 (lower is better) Translates to: ISPSLVFCKSKAILEQLSKIYSR*LWWATH Trigger: GTGAGTGGCCCACCACAGCAACCTACTGTATATTTT...ACTTAGCTGTTCAAGTATTGCCTTGGATTTACAAAATACAAGGGATGGGGAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000114138.8 |
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| CDS CCA 72 bp | CAGGACAAGGCTGGGGCAGGCCGCATTTGTACTTCCTaGCCCTTGGTTCTGCAGTCACTGAGTTCTCTGGGC | + |
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Preference number: 6 (lower is better) Translates to: QDKAGAGRICTS*PLVLQSLSSLG Trigger: GCCCAGAGAACTCAGTGACTGCAGAACCAAGGGCCAGGAAGTACAAATGCGGCCTGCCCCAGCCTTGTCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000015427.13 ENSMUST00000114138.8 ENSMUST00000114139.8 ENSMUST00000114141.8 ENSMUST00000114142.8 ENSMUST00000114143.10 ENSMUST00000122894.8 |
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| CDS TCA 72 bp | GCATTTGTACTTCCTGGCCCTTGGTTCTGCAGTCACTaGGTTCTCTGGGCTGGTGAAGAACTGCTGAATTCG | + |
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Preference number: 6 (lower is better) Translates to: AFVLPGPWFCSH*VLWAGEELLNS Trigger: CGAATTCAGCAGTTCTTCACCAGCCCAGAGAACTCAGTGACTGCAGAACCAAGGGCCAGGAAGTACAAATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000015427.13 ENSMUST00000114138.8 ENSMUST00000114141.8 ENSMUST00000114142.8 ENSMUST00000114143.10 ENSMUST00000122894.8 |
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| CDS CAA 72 bp | TGCTTACTGTTCTTCATATGCTGCTCAAAGGGGCTCTaGTTCTGCACACCTTTGGCTCCCACAAACACCCAG | + |
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Preference number: 6 (lower is better) Translates to: CLLFFICCSKGL*FCTPLAPTNTQ Trigger: CTGGGTGTTTGTGGGAGCCAAAGGTGTGCAGAACAAGAGCCCCTTTGAGCAGCATATGAAGAACAGTAAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000015427.13 ENSMUST00000114139.8 ENSMUST00000114141.8 ENSMUST00000114142.8 ENSMUST00000114143.10 |
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