Pregenerated sensors for FAM25C (Mus musculus)

Ensembl gene IDs: ENSMUSG00000043681

Ensembl transcript IDs: ENSMUST00000052126.6

Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS-3UTR CCA 90 bp	CGTTTCACACTCTTTATTGACCTTCAGGAAGGGCCAGCCATGCTGGTAGGCAGGCCAACCTCCTTGGCGTaGCCCACCACCTCGCTCACC	+
Preference number: 4 (lower is better) Translates to: RFTLFIDLQEGPAMLVGRPTSLA*PTTSLT Trigger: GGTGAGCGAGGTGGTGGGCCACGCCAAGGAGGTTGG...CCTGCCTACCAGCATGGCTGGCCCTTCCTGAAGGTCAATAAAGAGTGTGAAACG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052126.6
CDS-3UTR CCA 90 bp	CGTTTCACACTCTTTATTGACCTTCAGGAAGGGCCAGCCATGCTGGTAGGCAGGGAACTGCTCCCTCAGTaGCTTTCTCTGTGCGGTGGG	+
Preference number: 4 (lower is better) Translates to: RFTLFIDLQEGPAMLVGRELLPQ*LSLCGG Trigger: CCCACCGCACAGAGAAAGCCACTGAGGGAGCAGTTC...CCTGCCTACCAGCATGGCTGGCCCTTCCTGAAGGTCAATAAAGAGTGTGAAACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052126.6
CDS-3UTR TCA 90 bp	TCTGTTCACGTTTCACACTCTTTATTGACCTTCAGGAAGGGCCAGCCATGCTGGACCTCTTCCACTGCGTaGACTGCTCCCTCAGTGGCT	+
Preference number: 4 (lower is better) Translates to: SVHVSHSLLTFRKGQPCWTSSTA*TAPSVA Trigger: AGCCACTGAGGGAGCAGTTCACGCAGTGGAAGAGGT...CCAGCATGGCTGGCCCTTCCTGAAGGTCAATAAAGAGTGTGAAACGTGAACAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052126.6
CDS-3UTR CCA 90 bp	CGTTTCACACTCTTTATTGACCTTCAGGAAGGGCCAGCCATGCTGGTAGGCAGGGCATCAGTGATGGTGTaGGTGACCTTCTCAGTGACC	+
Preference number: 4 (lower is better) Translates to: RFTLFIDLQEGPAMLVGRASVMV*VTFSVT Trigger: GGTCACTGAGAAGGTCACCCACACCATCACTGATGC...CCTGCCTACCAGCATGGCTGGCCCTTCCTGAAGGTCAATAAAGAGTGTGAAACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052126.6
CDS-3UTR CCA 90 bp	TCACGTTTCACACTCTTTATTGACCTTCAGGAAGGGCCAGCCATGCTGGTAGGCAGGCCTTCTGCCGCATaGGTAACAGCATCAGTGATG	+
Preference number: 4 (lower is better) Translates to: SRFTLFIDLQEGPAMLVGRPSAA*VTASVM Trigger: CATCACTGATGCTGTTACCCATGCGGCAGAAGGCCT...GCCTACCAGCATGGCTGGCCCTTCCTGAAGGTCAATAAAGAGTGTGAAACGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052126.6
CDS-3UTR GCA 90 bp	TGTTCACGTTTCACACTCTTTATTGACCTTCAGGAAGGGCCAGCCATGCTGGTATCTTCCCAGGCCTTCTaGCGCATGGGTAACAGCATC	+
Preference number: 4 (lower is better) Translates to: CSRFTLFIDLQEGPAMLVSSQAF*RMGNSI Trigger: GATGCTGTTACCCATGCGGCAGAAGGCCTGGGAAGA...TACCAGCATGGCTGGCCCTTCCTGAAGGTCAATAAAGAGTGTGAAACGTGAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052126.6
CDS CCA 90 bp	CTTCCCAGGCCTTCTGCCGCATGGGTAACAGCATCAGTGATGGTGTaGGTGACCTTCTCAGTGACCTCCTTCACCACCCTGTCTCCTGAT	+
Preference number: 5 (lower is better) Translates to: LPRPSAAWVTASVMV*VTFSVTSFTTLSPD Trigger: ATCAGGAGACAGGGTGGTGAAGGAGGTCACTGAGAAGGTCACCCACACCATCACTGATGCTGTTACCCATGCGGCAGAAGGCCTGGGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052126.6
CDS CCA 72 bp	CCTTCTGCCGCATGGGTAACAGCATCAGTGATGGTGTaGGTGACCTTCTCAGTGACCTCCTTCACCACCCTG	+
Preference number: 6 (lower is better) Translates to: PSAAWVTASVMV*VTFSVTSFTTL Trigger: CAGGGTGGTGAAGGAGGTCACTGAGAAGGTCACCCACACCATCACTGATGCTGTTACCCATGCGGCAGAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052126.6

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