Pregenerated sensors for FAM24B (Mus musculus)

Ensembl gene IDs: ENSMUSG00000030858

Ensembl transcript IDs: ENSMUST00000033146.8, ENSMUST00000188899.2

Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	CATTACAACACTGGAGGGGACCGCAACTCGCAACAGCAATGGTGTTaGCCTGGTAGGAATGACAAGCCTCAGCAGGGATGCTGTTGGCCA	+
Preference number: 5 (lower is better) Translates to: HYNTGGDRNSQQQWC*PGRNDKPQQGCCWP Trigger: TGGCCAACAGCATCCCTGCTGAGGCTTGTCATTCCTACCAGGCCAACACCATTGCTGTTGCGAGTTGCGGTCCCCTCCAGTGTTGTAATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033146.8 ENSMUST00000188899.2
CDS CCA 90 bp	CACATACATTACAACACTGGAGGGGACCGCAACTCGCAACAGCAATaGTGTTGGCCTGGTAGGAATGACAAGCCTCAGCAGGGATGCTGT	+
Preference number: 5 (lower is better) Translates to: HIHYNTGGDRNSQQQ*CWPGRNDKPQQGCC Trigger: ACAGCATCCCTGCTGAGGCTTGTCATTCCTACCAGGCCAACACCATTGCTGTTGCGAGTTGCGGTCCCCTCCAGTGTTGTAATGTATGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033146.8 ENSMUST00000188899.2
CDS TCA 90 bp	CCTGGTAGGAATGACAAGCCTCAGCAGGGATGCTGTTGGCCAGGATaGTGCTCTCATGGGGGTCCTTGCATGGATCAATATAGCATTCAT	+
Preference number: 5 (lower is better) Translates to: PGRNDKPQQGCCWPG*CSHGGPCMDQYSIH Trigger: ATGAATGCTATATTGATCCATGCAAGGACCCCCATGAGAGCATCATCCTGGCCAACAGCATCCCTGCTGAGGCTTGTCATTCCTACCAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033146.8 ENSMUST00000188899.2
CDS CCA 90 bp	ATTCATCATCTGCCTCCTTTGCGATTCCAGGGGACTTCAGAGCCTTaGATATTTTGGAGTAAAGACAAAGCACAAGTCCTATCAGTAGAA	+
Preference number: 5 (lower is better) Translates to: IHHLPPLRFQGTSEP*IFWSKDKAQVLSVE Trigger: TTCTACTGATAGGACTTGTGCTTTGTCTTTACTCCAAAATATCCAAGGCTCTGAAGTCCCCTGGAATCGCAAAGGAGGCAGATGATGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033146.8 ENSMUST00000188899.2
CDS TCA 72 bp	AATGACAAGCCTCAGCAGGGATGCTGTTGGCCAGGATaGTGCTCTCATGGGGGTCCTTGCATGGATCAATAT	+
Preference number: 6 (lower is better) Translates to: NDKPQQGCCWPG*CSHGGPCMDQY Trigger: ATATTGATCCATGCAAGGACCCCCATGAGAGCATCATCCTGGCCAACAGCATCCCTGCTGAGGCTTGTCATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033146.8 ENSMUST00000188899.2
CDS GCA 72 bp	GGGGTCCTTGCATGGATCAATATAGCATTCATCATCTaGCTCCTTTGCGATTCCAGGGGACTTCAGAGCCTT	+
Preference number: 6 (lower is better) Translates to: GVLAWINIAFII*LLCDSRGLQSL Trigger: AAGGCTCTGAAGTCCCCTGGAATCGCAAAGGAGGCAGATGATGAATGCTATATTGATCCATGCAAGGACCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033146.8 ENSMUST00000188899.2
CDS CCA 72 bp	CTGCCTCCTTTGCGATTCCAGGGGACTTCAGAGCCTTaGATATTTTGGAGTAAAGACAAAGCACAAGTCCTA	+
Preference number: 6 (lower is better) Translates to: LPPLRFQGTSEP*IFWSKDKAQVL Trigger: TAGGACTTGTGCTTTGTCTTTACTCCAAAATATCCAAGGCTCTGAAGTCCCCTGGAATCGCAAAGGAGGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033146.8 ENSMUST00000188899.2
CDS CAA 72 bp	TGCATGGATCAATATAGCATTCATCATCTGCCTCCTTaGCGATTCCAGGGGACTTCAGAGCCTTGGATATTT	+
Preference number: 6 (lower is better) Translates to: CMDQYSIHHLPP*RFQGTSEPWIF Trigger: AAATATCCAAGGCTCTGAAGTCCCCTGGAATCGCAAAGGAGGCAGATGATGAATGCTATATTGATCCATGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033146.8 ENSMUST00000188899.2

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