Pregenerated sensors for FAM24A (Mus musculus)

Ensembl gene IDs: ENSMUSG00000030859

Ensembl transcript IDs: ENSMUST00000084505.5, ENSMUST00000207439.2, ENSMUST00000207784.2

Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	AATAATGGGCTTGGCCCGGATGATCTTCTCATTGGGGTCCTTGCATaGATCAATACAGCATTCAGGCTCCTTTGCGAGTTTCAGGGCCTT	+
Preference number: 5 (lower is better) Translates to: NNGLGPDDLLIGVLA*INTAFRLLCEFQGL Trigger: AAGGCCCTGAAACTCGCAAAGGAGCCTGAATGCTGTATTGATCCATGCAAGGACCCCAATGAGAAGATCATCCGGGCCAAGCCCATTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084505.5 ENSMUST00000207439.2 ENSMUST00000207784.2
CDS GCA 90 bp	GGATATTTTCTGGTAAAGACAGAACACAAGCGTTATCAGCATGATTaGAGCAATCAGCAGAGTGCTAGCGATGCCGATCATAACCTTCGT	+
Preference number: 5 (lower is better) Translates to: GYFLVKTEHKRYQHD*SNQQSASDADHNLR Trigger: ACGAAGGTTATGATCGGCATCGCTAGCACTCTGCTGATTGCTGCAATCATGCTGATAACGCTTGTGTTCTGTCTTTACCAGAAAATATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084505.5 ENSMUST00000207439.2 ENSMUST00000207784.2
CDS CAA 72 bp	ATGGGCTTGGCCCGGATGATCTTCTCATTGGGGTCCTaGCATGGATCAATACAGCATTCAGGCTCCTTTGCG	+
Preference number: 6 (lower is better) Translates to: MGLARMIFSLGS*HGSIQHSGSFA Trigger: CGCAAAGGAGCCTGAATGCTGTATTGATCCATGCAAGGACCCCAATGAGAAGATCATCCGGGCCAAGCCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084505.5 ENSMUST00000207439.2 ENSMUST00000207784.2
CDS CCA 72 bp	CTTGGCCCGGATGATCTTCTCATTGGGGTCCTTGCATaGATCAATACAGCATTCAGGCTCCTTTGCGAGTTT	+
Preference number: 6 (lower is better) Translates to: LGPDDLLIGVLA*INTAFRLLCEF Trigger: AAACTCGCAAAGGAGCCTGAATGCTGTATTGATCCATGCAAGGACCCCAATGAGAAGATCATCCGGGCCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084505.5 ENSMUST00000207439.2 ENSMUST00000207784.2
CDS GCA 72 bp	CTGGTAAAGACAGAACACAAGCGTTATCAGCATGATTaGAGCAATCAGCAGAGTGCTAGCGATGCCGATCAT	+
Preference number: 6 (lower is better) Translates to: LVKTEHKRYQHD*SNQQSASDADH Trigger: ATGATCGGCATCGCTAGCACTCTGCTGATTGCTGCAATCATGCTGATAACGCTTGTGTTCTGTCTTTACCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084505.5 ENSMUST00000207439.2 ENSMUST00000207784.2
CDS GCA 72 bp	GTCCTTGCATGGATCAATACAGCATTCAGGCTCCTTTaGGAGTTTCAGGGCCTTGGATATTTTCTGGTAAAG	+
Preference number: 6 (lower is better) Translates to: VLAWINTAFRLL*EFQGLGYFLVK Trigger: CTTTACCAGAAAATATCCAAGGCCCTGAAACTCGCAAAGGAGCCTGAATGCTGTATTGATCCATGCAAGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084505.5 ENSMUST00000207439.2 ENSMUST00000207784.2

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