Pregenerated sensors for FAM243 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051728Ensembl transcript IDs: ENSMUST00000062638.8
Found 65 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | CTGAGCTGTCACACTTGGGAAACATTCATCGCTAGACCTTGGACCTaGCTAGCTGGCCAGGTTCACGCTGCCGACCCTGTGGCACCTGCC | + |
Preference number: 1 (lower is better) Translates to: LSCHTWETFIARPWT*LAGQVHAADPVAPA Trigger: GGCAGGTGCCACAGGGTCGGCAGCGTGAACCTGGCCAGCTAGGCAGGTCCAAGGTCTAGCGATGAATGTTTCCCAAGTGTGACAGCTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062638.8 |
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3UTR CCA 90 bp | CAGTTGCCTCTCACCACCACTACCTCCCAGAGGGATAGCCCCGGCTaGACCACTGTATGCACGTGTCTCTTGCTCATGGCAAGGCGGATG | + |
Preference number: 1 (lower is better) Translates to: QLPLTTTTSQRDSPG*TTVCTCLLLMARRM Trigger: CATCCGCCTTGCCATGAGCAAGAGACACGTGCATACAGTGGTCCAGCCGGGGCTATCCCTCTGGGAGGTAGTGGTGGTGAGAGGCAACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062638.8 |
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3UTR CCA 90 bp | TTTTTACTGAGCTGTCACACTTGGGAAACATTCATCGCTAGACCTTaGACCTGCCTAGCTGGCCAGGTTCACGCTGCCGACCCTGTGGCA | + |
Preference number: 1 (lower is better) Translates to: FLLSCHTWETFIARP*TCLAGQVHAADPVA Trigger: TGCCACAGGGTCGGCAGCGTGAACCTGGCCAGCTAGGCAGGTCCAAGGTCTAGCGATGAATGTTTCCCAAGTGTGACAGCTCAGTAAAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062638.8 |
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3UTR TCA 90 bp | GCAAAGAGTGGATTGCTGCTTCCAGCCACCAAATGTGCAATCCTTTaGTACGGCAGCCACCAGCTCACACAGCACGGTGTAAGAGTTGGA | + |
Preference number: 1 (lower is better) Translates to: AKSGLLLPATKCAIL*YGSHQLTQHGVRVG Trigger: TCCAACTCTTACACCGTGCTGTGTGAGCTGGTGGCTGCCGTATCAAAGGATTGCACATTTGGTGGCTGGAAGCAGCAATCCACTCTTTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062638.8 |
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3UTR GCA 90 bp | AAGATTCCAGAGAAGAGGAGGACAAGATTGGAATATGGAGCAGTCTaGATTTGGCAGCGGCCTGGCTTCGCAACTCCACCCACAGTCAAA | + |
Preference number: 1 (lower is better) Translates to: KIPEKRRTRLEYGAV*IWQRPGFATPPTVK Trigger: TTTGACTGTGGGTGGAGTTGCGAAGCCAGGCCGCTGCCAAATGCAGACTGCTCCATATTCCAATCTTGTCCTCCTCTTCTCTGGAATCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062638.8 |
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3UTR CCA 90 bp | ATAACACAGGAAGATTCCAGAGAAGAGGAGGACAAGATTGGAATATaGAGCAGTCTGCATTTGGCAGCGGCCTGGCTTCGCAACTCCACC | + |
Preference number: 1 (lower is better) Translates to: ITQEDSREEEDKIGI*SSLHLAAAWLRNST Trigger: GGTGGAGTTGCGAAGCCAGGCCGCTGCCAAATGCAGACTGCTCCATATTCCAATCTTGTCCTCCTCTTCTCTGGAATCTTCCTGTGTTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062638.8 |
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3UTR TCA 90 bp | AGCATTAACGCTCCAGGTGGCTCTGTTCATCCCACGGCCTCTTTCTaGATAACACAGGAAGATTCCAGAGAAGAGGAGGACAAGATTGGA | + |
Preference number: 1 (lower is better) Translates to: SINAPGGSVHPTASF*ITQEDSREEEDKIG Trigger: TCCAATCTTGTCCTCCTCTTCTCTGGAATCTTCCTGTGTTATTCAGAAAGAGGCCGTGGGATGAACAGAGCCACCTGGAGCGTTAATGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062638.8 |
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3UTR TCA 90 bp | AGCCATGCTGCTTACAGCTTGATTCACATCAGTGAGACTGATGTCTaGCTCCCGATAGCCAGCATAGCAAAGAGTGGATTGCTGCTTCCA | + |
Preference number: 1 (lower is better) Translates to: SHAAYSLIHISETDV*LPIASIAKSGLLLP Trigger: TGGAAGCAGCAATCCACTCTTTGCTATGCTGGCTATCGGGAGTCAGACATCAGTCTCACTGATGTGAATCAAGCTGTAAGCAGCATGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062638.8 |
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3UTR CCA 90 bp | TTTCTGAATAACACAGGAAGATTCCAGAGAAGAGGAGGACAAGATTaGAATATGGAGCAGTCTGCATTTGGCAGCGGCCTGGCTTCGCAA | + |
Preference number: 1 (lower is better) Translates to: FLNNTGRFQRRGGQD*NMEQSAFGSGLASQ Trigger: TTGCGAAGCCAGGCCGCTGCCAAATGCAGACTGCTCCATATTCCAATCTTGTCCTCCTCTTCTCTGGAATCTTCCTGTGTTATTCAGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062638.8 |
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3UTR TCA 90 bp | CCAATAACTCCCATAAACGTGGTCCTCAGGGTAGCCATCACAAGATaGGAGTTGATACCCTGTACTTATCAACAAACTTTAATGGAGCCT | + |
Preference number: 1 (lower is better) Translates to: PITPINVVLRVAITR*ELIPCTYQQTLMEP Trigger: AGGCTCCATTAAAGTTTGTTGATAAGTACAGGGTATCAACTCTCATCTTGTGATGGCTACCCTGAGGACCACGTTTATGGGAGTTATTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062638.8 |
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3UTR-3UTR CCA 90 bp | AAAGAGTGGATTGCTGCTTCCAGCCACCAAATGTGCAATCCTTTGATACGGCAGGCCCACAGCGCCCCCTaGGGCTTGAGCAGGGTGTTG | + |
Preference number: 2 (lower is better) Translates to: KEWIAASSHQMCNPLIRQAHSAP*GLSRVL Trigger: CAACACCCTGCTCAAGCCCCAGGGGGCGCTGTGGGC...CTGCCGTATCAAAGGATTGCACATTTGGTGGCTGGAAGCAGCAATCCACTCTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062638.8 |
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3UTR-3UTR GCA 90 bp | AGTCTGCATTTGGCAGCGGCCTGGCTTCGCAACTCCACCCACAGTCAAATCCGCCAAGTAGAGTTCTTGTaGCCTTTCTGCTCCTGCCTC | + |
Preference number: 2 (lower is better) Translates to: SLHLAAAWLRNSTHSQIRQVEFL*PFCSCL Trigger: GAGGCAGGAGCAGAAAGGGCACAAGAACTCTACTTG...GCGGATTTGACTGTGGGTGGAGTTGCGAAGCCAGGCCGCTGCCAAATGCAGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062638.8 |
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3UTR-3UTR CCA 90 bp | AGTCTGCATTTGGCAGCGGCCTGGCTTCGCAACTCCACCCACAGTCAAATCCGCGGGATTCTTGCAGGTTaGATATGTGGGTTCCATCGT | + |
Preference number: 2 (lower is better) Translates to: SLHLAAAWLRNSTHSQIRGILAG*ICGFHR Trigger: ACGATGGAACCCACATATCCAACCTGCAAGAATCCC...GCGGATTTGACTGTGGGTGGAGTTGCGAAGCCAGGCCGCTGCCAAATGCAGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062638.8 |
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3UTR-3UTR CCA 90 bp | CCTGTGGCACCTGCCACTGGTGCTGCCACTGTGGCTGTTGCTATCGATGCTGCCGACAAGATTGGAATATaGAGCAGTCTGCATTTGGCA | + |
Preference number: 2 (lower is better) Translates to: PVAPATGAATVAVAIDAADKIGI*SSLHLA Trigger: TGCCAAATGCAGACTGCTCCATATTCCAATCTTGTC...GGCAGCATCGATAGCAACAGCCACAGTGGCAGCACCAGTGGCAGGTGCCACAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062638.8 |
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3UTR-3UTR TCA 90 bp | GCTGTCCATATTTTCCTGTGTAGGTTGTCATTTTATGCACCTCAGAGTAACTACGCGCCCCCTGGGGCTTaGGCAGGGTGTTGTGCCAAC | + |
Preference number: 2 (lower is better) Translates to: AVHIFLCRLSFYAPQSNYAPPGA*AGCCAN Trigger: GTTGGCACAACACCCTGCTCAAGCCCCAGGGGGCGC...GTAGTTACTCTGAGGTGCATAAAATGACAACCTACACAGGAAAATATGGACAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000062638.8 |
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3UTR-3UTR CCA 90 bp | AGTAGAGTTCTTGTGCCCTTTCTGCTCCTGCCTCGTGGCTGTCCATATTTTCCTCGTGTCTCTTGCTCATaGCAAGGCGGATGCTTGTGG | + |
Preference number: 2 (lower is better) Translates to: SRVLVPFLLLPRGCPYFPRVSCS*QGGCLW Trigger: CCACAAGCATCCGCCTTGCCATGAGCAAGAGACACG...AGGAAAATATGGACAGCCACGAGGCAGGAGCAGAAAGGGCACAAGAACTCTACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062638.8 |
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3UTR-3UTR TCA 90 bp | CCTGCCTCGTGGCTGTCCATATTTTCCTGTGTAGGTTGTCATTTTATGCACCTCCAAGAACCTCCCCGTTaGGGCAGTAATCCCTCAAGG | + |
Preference number: 2 (lower is better) Translates to: PASWLSIFSCVGCHFMHLQEPPR*GSNPSR Trigger: CCTTGAGGGATTACTGCCTCAACGGGGAGGTTCTTG...GAGGTGCATAAAATGACAACCTACACAGGAAAATATGGACAGCCACGAGGCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000062638.8 |
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3UTR-3UTR TCA 90 bp | AGTCTGCATTTGGCAGCGGCCTGGCTTCGCAACTCCACCCACAGTCAAATCCGCTCACAAGATGAGAGTTaGTACCCTGTACTTATCAAC | + |
Preference number: 2 (lower is better) Translates to: SLHLAAAWLRNSTHSQIRSQDES*YPVLIN Trigger: GTTGATAAGTACAGGGTATCAACTCTCATCTTGTGA...GCGGATTTGACTGTGGGTGGAGTTGCGAAGCCAGGCCGCTGCCAAATGCAGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062638.8 |
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3UTR-3UTR GCA 90 bp | ATTCCAGAGAAGAGGAGGACAAGATTGGAATATGGAGCAGTCTGCATTTGGCAGTCCGGATGGGATTCTTaGAGGTTGGATATGTGGGTT | + |
Preference number: 2 (lower is better) Translates to: IPEKRRTRLEYGAVCIWQSGWDS*RLDMWV Trigger: AACCCACATATCCAACCTGCAAGAATCCCATCCGGA...CTGCCAAATGCAGACTGCTCCATATTCCAATCTTGTCCTCCTCTTCTCTGGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062638.8 |
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3UTR-3UTR TCA 90 bp | TCCATATTTTCCTGTGTAGGTTGTCATTTTATGCACCTCAGAGTAACTACTTCTGACCCCTTGAACCTTTaGTGTCTCCATGGCTCCCTT | + |
Preference number: 2 (lower is better) Translates to: SIFSCVGCHFMHLRVTTSDPLNL*CLHGSL Trigger: AAGGGAGCCATGGAGACATCAAAGGTTCAAGGGGTC...AGAAGTAGTTACTCTGAGGTGCATAAAATGACAACCTACACAGGAAAATATGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000062638.8 |
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3UTR TCA 72 bp | CACAGACCCTTCCGGCCCACAGCGCCCCCTGGGGCTTaGGCAGGGTGTTGTGCCAACTGCAGTAGCTCAGCT | + |
Preference number: 3 (lower is better) Translates to: HRPFRPTAPPGA*AGCCANCSSSA Trigger: AGCTGAGCTACTGCAGTTGGCACAACACCCTGCTCAAGCCCCAGGGGGCGCTGTGGGCCGGAAGGGTCTGTG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062638.8 |
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3UTR GCA 72 bp | TCACGCTGCCGACCCTGTGGCACCTGCCACTGGTGCTaGCACTGTGGCTGTTGCTATCGATGCTGCCGTAGC | + |
Preference number: 3 (lower is better) Translates to: SRCRPCGTCHWC*HCGCCYRCCRS Trigger: GCTACGGCAGCATCGATAGCAACAGCCACAGTGGCAGCACCAGTGGCAGGTGCCACAGGGTCGGCAGCGTGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062638.8 |
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3UTR GCA 72 bp | GGTTCACGCTGCCGACCCTGTGGCACCTGCCACTGGTaGTGCCACTGTGGCTGTTGCTATCGATGCTGCCGT | + |
Preference number: 3 (lower is better) Translates to: GSRCRPCGTCHW*CHCGCCYRCCR Trigger: ACGGCAGCATCGATAGCAACAGCCACAGTGGCAGCACCAGTGGCAGGTGCCACAGGGTCGGCAGCGTGAACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062638.8 |
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3UTR GCA 72 bp | AGCTGGCCAGGTTCACGCTGCCGACCCTGTGGCACCTaGCACTGGTGCTGCCACTGTGGCTGTTGCTATCGA | + |
Preference number: 3 (lower is better) Translates to: SWPGSRCRPCGT*HWCCHCGCCYR Trigger: TCGATAGCAACAGCCACAGTGGCAGCACCAGTGGCAGGTGCCACAGGGTCGGCAGCGTGAACCTGGCCAGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062638.8 |
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3UTR CCA 72 bp | CCAGGTTCACGCTGCCGACCCTGTGGCACCTGCCACTaGTGCTGCCACTGTGGCTGTTGCTATCGATGCTGC | + |
Preference number: 3 (lower is better) Translates to: PGSRCRPCGTCH*CCHCGCCYRCC Trigger: GCAGCATCGATAGCAACAGCCACAGTGGCAGCACCAGTGGCAGGTGCCACAGGGTCGGCAGCGTGAACCTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062638.8 |
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3UTR CCA 72 bp | AGGGTAAGTGGGCCATCAGAACCTGGGAGACACTTGTaGCAGCCTTCCCTAGAGCCCCCGGCAGTACAGCCA | + |
Preference number: 3 (lower is better) Translates to: RVSGPSEPGRHL*QPSLEPPAVQP Trigger: TGGCTGTACTGCCGGGGGCTCTAGGGAAGGCTGCCACAAGTGTCTCCCAGGTTCTGATGGCCCACTTACCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062638.8 |
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3UTR-3UTR CAA 90 bp | CCTGTGGCACCTGCCACTGGTGCTGCCACTGTGGCTGTTGCTATCGATGCTGCCCTCCGGATGGGATTCTaGCAGGTTGGATATGTGGGT | + |
Preference number: 3 (lower is better) Translates to: PVAPATGAATVAVAIDAALRMGF*QVGYVG Trigger: ACCCACATATCCAACCTGCAAGAATCCCATCCGGAG...GGCAGCATCGATAGCAACAGCCACAGTGGCAGCACCAGTGGCAGGTGCCACAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062638.8 |
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3UTR TCA 72 bp | GGCCCCACCCATTTGCCTTGGACATATGGAGCGGTTTaGCTACCTCGCAGTTGCCTCTCACCACCACTACCT | + |
Preference number: 3 (lower is better) Translates to: GPTHLPWTYGAV*LPRSCLSPPLP Trigger: AGGTAGTGGTGGTGAGAGGCAACTGCGAGGTAGTCAAACCGCTCCATATGTCCAAGGCAAATGGGTGGGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062638.8 |
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3UTR CCA 72 bp | GCTCCCTTTTGGCCCCACCCATTTGCCTTGGACATATaGAGCGGTTTGACTACCTCGCAGTTGCCTCTCACC | + |
Preference number: 3 (lower is better) Translates to: APFWPHPFALDI*SGLTTSQLPLT Trigger: GGTGAGAGGCAACTGCGAGGTAGTCAAACCGCTCCATATGTCCAAGGCAAATGGGTGGGGCCAAAAGGGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062638.8 |
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3UTR CCA 72 bp | CAGCCTTTGGACTCTCCGGATGGGATTCTTGCAGGTTaGATATGTGGGTTCCATCGTCCTCCCATCCCCCAC | + |
Preference number: 3 (lower is better) Translates to: QPLDSPDGILAG*ICGFHRPPIPH Trigger: GTGGGGGATGGGAGGACGATGGAACCCACATATCCAACCTGCAAGAATCCCATCCGGAGAGTCCAAAGGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062638.8 |
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3UTR CCA 72 bp | AGCTGTCACACTTGGGAAACATTCATCGCTAGACCTTaGACCTGCCTAGCTGGCCAGGTTCACGCTGCCGAC | + |
Preference number: 3 (lower is better) Translates to: SCHTWETFIARP*TCLAGQVHAAD Trigger: GTCGGCAGCGTGAACCTGGCCAGCTAGGCAGGTCCAAGGTCTAGCGATGAATGTTTCCCAAGTGTGACAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062638.8 |
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3UTR-3UTR CAA 90 bp | AAGGGTAAGTGGGCCATCAGAACCTGGGAGACACTTGTGGCAGCCTTCCCTAGATTTGGCCCCACCCATTaGCCTTGGACATATGGAGCG | + |
Preference number: 3 (lower is better) Translates to: KGKWAIRTWETLVAAFPRFGPTH*PWTYGA Trigger: CGCTCCATATGTCCAAGGCAAATGGGTGGGGCCAAA...TCTAGGGAAGGCTGCCACAAGTGTCTCCCAGGTTCTGATGGCCCACTTACCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062638.8 |
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3UTR TCA 72 bp | TGCCACTGTGGCTGTTGCTATCGATGCTGCCGTAGCTaGCCATTCACAGGAAGAGACCTCTGCTACCTGTCC | + |
Preference number: 3 (lower is better) Translates to: CHCGCCYRCCRS*PFTGRDLCYLS Trigger: GGACAGGTAGCAGAGGTCTCTTCCTGTGAATGGTCAGCTACGGCAGCATCGATAGCAACAGCCACAGTGGCA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062638.8 |
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3UTR CCA 72 bp | AGGAGGACAAGATTGGAATATGGAGCAGTCTGCATTTaGCAGCGGCCTGGCTTCGCAACTCCACCCACAGTC | + |
Preference number: 3 (lower is better) Translates to: RRTRLEYGAVCI*QRPGFATPPTV Trigger: GACTGTGGGTGGAGTTGCGAAGCCAGGCCGCTGCCAAATGCAGACTGCTCCATATTCCAATCTTGTCCTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062638.8 |
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3UTR CCA 72 bp | CTTCTTGGACAGCAGATGACTCTAGCCAAGGGTAAGTaGGCCATCAGAACCTGGGAGACACTTGTGGCAGCC | + |
Preference number: 3 (lower is better) Translates to: LLGQQMTLAKGK*AIRTWETLVAA Trigger: GGCTGCCACAAGTGTCTCCCAGGTTCTGATGGCCCACTTACCCTTGGCTAGAGTCATCTGCTGTCCAAGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062638.8 |
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3UTR TCA 72 bp | GGATTGCTGCTTCCAGCCACCAAATGTGCAATCCTTTaGTACGGCAGCCACCAGCTCACACAGCACGGTGTA | + |
Preference number: 3 (lower is better) Translates to: GLLLPATKCAIL*YGSHQLTQHGV Trigger: TACACCGTGCTGTGTGAGCTGGTGGCTGCCGTATCAAAGGATTGCACATTTGGTGGCTGGAAGCAGCAATCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062638.8 |
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3UTR TCA 72 bp | AGAGCCCCCGGCAGTACAGCCATGCTGCTTACAGCTTaGTTCACATCAGTGAGACTGATGTCTGACTCCCGA | + |
Preference number: 3 (lower is better) Translates to: RAPGSTAMLLTA*FTSVRLMSDSR Trigger: TCGGGAGTCAGACATCAGTCTCACTGATGTGAATCAAGCTGTAAGCAGCATGGCTGTACTGCCGGGGGCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062638.8 |
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3UTR TCA 72 bp | GCTCCAGGTGGCTCTGTTCATCCCACGGCCTCTTTCTaGATAACACAGGAAGATTCCAGAGAAGAGGAGGAC | + |
Preference number: 3 (lower is better) Translates to: APGGSVHPTASF*ITQEDSREEED Trigger: GTCCTCCTCTTCTCTGGAATCTTCCTGTGTTATTCAGAAAGAGGCCGTGGGATGAACAGAGCCACCTGGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062638.8 |
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3UTR GCA 72 bp | AGCAAAGAGTGGATTGCTGCTTCCAGCCACCAAATGTaGAATCCTTTGATACGGCAGCCACCAGCTCACACA | + |
Preference number: 3 (lower is better) Translates to: SKEWIAASSHQM*NPLIRQPPAHT Trigger: TGTGTGAGCTGGTGGCTGCCGTATCAAAGGATTGCACATTTGGTGGCTGGAAGCAGCAATCCACTCTTTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062638.8 |
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3UTR CCA 72 bp | TATTGCTTGAGCATACATAAGGAAAAAGGCGCTTTGTaGTCGGTTTCACAGGCGCCGGGCTTTTCCTGTAGC | + |
Preference number: 3 (lower is better) Translates to: YCLSIHKEKGAL*SVSQAPGFSCS Trigger: GCTACAGGAAAAGCCCGGCGCCTGTGAAACCGACCACAAAGCGCCTTTTTCCTTATGTATGCTCAAGCAATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062638.8 |
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3UTR GCA 72 bp | AGGTTCAGCAAAACTGAAGACCAAGTAGAGTTCTTGTaGCCTTTCTGCTCCTGCCTCGTGGCTGTCCATATT | + |
Preference number: 3 (lower is better) Translates to: RFSKTEDQVEFL*PFCSCLVAVHI Trigger: AATATGGACAGCCACGAGGCAGGAGCAGAAAGGGCACAAGAACTCTACTTGGTCTTCAGTTTTGCTGAACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062638.8 |
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3UTR CCA 72 bp | GATCATCCGAGACTGTTTTTACTGAGCTGTCACACTTaGGAAACATTCATCGCTAGACCTTGGACCTGCCTA | + |
Preference number: 3 (lower is better) Translates to: DHPRLFLLSCHT*ETFIARPWTCL Trigger: TAGGCAGGTCCAAGGTCTAGCGATGAATGTTTCCCAAGTGTGACAGCTCAGTAAAAACAGTCTCGGATGATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062638.8 |
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3UTR CAA 72 bp | TGGCCCCACCCATTTGCCTTGGACATATGGAGCGGTTaGACTACCTCGCAGTTGCCTCTCACCACCACTACC | + |
Preference number: 4 (lower is better) Translates to: WPHPFALDIWSG*TTSQLPLTTTT Trigger: GGTAGTGGTGGTGAGAGGCAACTGCGAGGTAGTCAAACCGCTCCATATGTCCAAGGCAAATGGGTGGGGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062638.8 |
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3UTR CAA 72 bp | GCAGCCTTTGGACTCTCCGGATGGGATTCTTGCAGGTaGGATATGTGGGTTCCATCGTCCTCCCATCCCCCA | + |
Preference number: 4 (lower is better) Translates to: AAFGLSGWDSCR*DMWVPSSSHPP Trigger: TGGGGGATGGGAGGACGATGGAACCCACATATCCAACCTGCAAGAATCCCATCCGGAGAGTCCAAAGGCTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062638.8 |
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3UTR CAA 72 bp | CGCAGTGGCAGCCTTTGGACTCTCCGGATGGGATTCTaGCAGGTTGGATATGTGGGTTCCATCGTCCTCCCA | + |
Preference number: 4 (lower is better) Translates to: RSGSLWTLRMGF*QVGYVGSIVLP Trigger: TGGGAGGACGATGGAACCCACATATCCAACCTGCAAGAATCCCATCCGGAGAGTCCAAAGGCTGCCACTGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062638.8 |
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3UTR CAA 72 bp | GTCTCCATGGCTCCCTTTTGGCCCCACCCATTTGCCTaGGACATATGGAGCGGTTTGACTACCTCGCAGTTG | + |
Preference number: 4 (lower is better) Translates to: VSMAPFWPHPFA*DIWSGLTTSQL Trigger: CAACTGCGAGGTAGTCAAACCGCTCCATATGTCCAAGGCAAATGGGTGGGGCCAAAAGGGAGCCATGGAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062638.8 |
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3UTR CAA 72 bp | GAGGAGGACAAGATTGGAATATGGAGCAGTCTGCATTaGGCAGCGGCCTGGCTTCGCAACTCCACCCACAGT | + |
Preference number: 4 (lower is better) Translates to: EEDKIGIWSSLH*AAAWLRNSTHS Trigger: ACTGTGGGTGGAGTTGCGAAGCCAGGCCGCTGCCAAATGCAGACTGCTCCATATTCCAATCTTGTCCTCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062638.8 |
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3UTR CAA 72 bp | TGGATTGCTGCTTCCAGCCACCAAATGTGCAATCCTTaGATACGGCAGCCACCAGCTCACACAGCACGGTGT | + |
Preference number: 4 (lower is better) Translates to: WIAASSHQMCNP*IRQPPAHTARC Trigger: ACACCGTGCTGTGTGAGCTGGTGGCTGCCGTATCAAAGGATTGCACATTTGGTGGCTGGAAGCAGCAATCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062638.8 |
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3UTR CAA 72 bp | ACAAACTTTAATGGAGCCTCTGTCAACCCCAGGACTTaGCTGGTAGCCCTCAAGAACCTCCCCGTTGAGGCA | + |
Preference number: 4 (lower is better) Translates to: TNFNGASVNPRT*LVALKNLPVEA Trigger: TGCCTCAACGGGGAGGTTCTTGAGGGCTACCAGCAAAGTCCTGGGGTTGACAGAGGCTCCATTAAAGTTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062638.8 |
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CDS-3UTR TCA 90 bp | GGACATATGGAGCGGTTTGACTACCTCGCAGTTGCCTCTCACCACCACTACCTCGGCTGTCTTCCTTCTTaGTGCACAGGTCATTTCTCA | + |
Preference number: 4 (lower is better) Translates to: GHMERFDYLAVASHHHYLGCLPS*CTGHFS Trigger: TGAGAAATGACCTGTGCATCAAGAAGGAAGACAGCC...GAGGTAGTGGTGGTGAGAGGCAACTGCGAGGTAGTCAAACCGCTCCATATGTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062638.8 |
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CDS-3UTR GCA 90 bp | AAGGGTAAGTGGGCCATCAGAACCTGGGAGACACTTGTGGCAGCCTTCCCTAGATTCATCTCATCTTGCTaGCTTCTCCCTTTGACCACG | + |
Preference number: 4 (lower is better) Translates to: KGKWAIRTWETLVAAFPRFISSC*LLPLTT Trigger: CGTGGTCAAAGGGAGAAGGCAGCAAGATGAGATGAA...TCTAGGGAAGGCTGCCACAAGTGTCTCCCAGGTTCTGATGGCCCACTTACCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062638.8 |
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3UTR CAA 72 bp | TCTAGGTTCAGCAAAACTGAAGACCAAGTAGAGTTCTaGTGCCCTTTCTGCTCCTGCCTCGTGGCTGTCCAT | + |
Preference number: 4 (lower is better) Translates to: SRFSKTEDQVEF*CPFCSCLVAVH Trigger: ATGGACAGCCACGAGGCAGGAGCAGAAAGGGCACAAGAACTCTACTTGGTCTTCAGTTTTGCTGAACCTAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062638.8 |
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3UTR CAA 72 bp | AGTTATTGCTTGAGCATACATAAGGAAAAAGGCGCTTaGTGGTCGGTTTCACAGGCGCCGGGCTTTTCCTGT | + |
Preference number: 4 (lower is better) Translates to: SYCLSIHKEKGA*WSVSQAPGFSC Trigger: ACAGGAAAAGCCCGGCGCCTGTGAAACCGACCACAAAGCGCCTTTTTCCTTATGTATGCTCAAGCAATAACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062638.8 |
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CDS-3UTR GCA 90 bp | CCTGCCTCGTGGCTGTCCATATTTTCCTGTGTAGGTTGTCATTTTATGCACCTCAATAGTTCTCCCACCTaGGCACCTTGTTGGTTATGG | + |
Preference number: 4 (lower is better) Translates to: PASWLSIFSCVGCHFMHLNSSPT*APCWLW Trigger: CCATAACCAACAAGGTGCGCAGGTGGGAGAACTATT...GAGGTGCATAAAATGACAACCTACACAGGAAAATATGGACAGCCACGAGGCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062638.8 |
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CDS-3UTR CCA 90 bp | ATGGTGAGTCAGAATCAGACTCCACAGTTAGCAGCAAAGAGCATACAGCTCAGGCTCCTTGTCTGTCTTTaGCTTCATCTCATCTTGCTG | + |
Preference number: 4 (lower is better) Translates to: MVSQNQTPQLAAKSIQLRLLVCL*LHLILL Trigger: CAGCAAGATGAGATGAAGCCAAAGACAGACAAGGAG...CCTGAGCTGTATGCTCTTTGCTGCTAACTGTGGAGTCTGATTCTGACTCACCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062638.8 |
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3UTR CAA 72 bp | TCCTGCCTCGTGGCTGTCCATATTTTCCTGTGTAGGTaGTCATTTTATGCACCTCAGAGTAACTACTTCTGT | + |
Preference number: 4 (lower is better) Translates to: SCLVAVHIFLCR*SFYAPQSNYFC Trigger: ACAGAAGTAGTTACTCTGAGGTGCATAAAATGACAACCTACACAGGAAAATATGGACAGCCACGAGGCAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062638.8 |
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CDS-3UTR GCA 90 bp | TCCATATTTTCCTGTGTAGGTTGTCATTTTATGCACCTCAGAGTAACTACTTCTGGCTTCATCTCATCTTaGTGCCTTCTCCCTTTGACC | + |
Preference number: 4 (lower is better) Translates to: SIFSCVGCHFMHLRVTTSGFISS*CLLPLT Trigger: GGTCAAAGGGAGAAGGCAGCAAGATGAGATGAAGCC...AGAAGTAGTTACTCTGAGGTGCATAAAATGACAACCTACACAGGAAAATATGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062638.8 |
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CDS CCA 90 bp | GCTTGTTGGGACATAGGCCTTGGCCTCCCCCTCCTTGTCTGTCTTTaGCTTCATCTCATCTTGCTGCCTTCTCCCTTTGACCACGATGGC | + |
Preference number: 5 (lower is better) Translates to: ACWDIGLGLPLLVCL*LHLILLPSPFDHDG Trigger: GCCATCGTGGTCAAAGGGAGAAGGCAGCAAGATGAGATGAAGCCAAAGACAGACAAGGAGGGGGAGGCCAAGGCCTATGTCCCAACAAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062638.8 |
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CDS-3UTR CAA 90 bp | ACTCTAGCCAAGGGTAAGTGGGCCATCAGAACCTGGGAGACACTTGTGGCAGCCAGGCTGTCTTCCTTCTaGATGCACAGGTCATTTCTC | + |
Preference number: 5 (lower is better) Translates to: TLAKGKWAIRTWETLVAARLSSF*MHRSFL Trigger: GAGAAATGACCTGTGCATCAAGAAGGAAGACAGCCT...GGCTGCCACAAGTGTCTCCCAGGTTCTGATGGCCCACTTACCCTTGGCTAGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062638.8 |
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CDS TCA 90 bp | CCTTGTCTGTCTTTGGCTTCATCTCATCTTGCTGCCTTCTCCCTTTaGCCACGATGGCACACTTGCCATAGGCCCTCTTCACAACATCAC | + |
Preference number: 5 (lower is better) Translates to: PCLSLASSHLAAFSL*PRWHTCHRPSSQHH Trigger: GTGATGTTGTGAAGAGGGCCTATGGCAAGTGTGCCATCGTGGTCAAAGGGAGAAGGCAGCAAGATGAGATGAAGCCAAAGACAGACAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062638.8 |
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CDS-3UTR CAA 90 bp | AAGGGTAAGTGGGCCATCAGAACCTGGGAGACACTTGTGGCAGCCTTCCCTAGACCAAAATACACGGTCTaGTATCCATTGTGTTGCAGC | + |
Preference number: 5 (lower is better) Translates to: KGKWAIRTWETLVAAFPRPKYTV*YPLCCS Trigger: GCTGCAACACAATGGATACAAGACCGTGTATTTTGG...TCTAGGGAAGGCTGCCACAAGTGTCTCCCAGGTTCTGATGGCCCACTTACCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062638.8 |
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CDS-3UTR CAA 90 bp | ATTCCAGAGAAGAGGAGGACAAGATTGGAATATGGAGCAGTCTGCATTTGGCAGCACCTGCGCACCTTGTaGGTTATGGCCTTCCACTTG | + |
Preference number: 5 (lower is better) Translates to: IPEKRRTRLEYGAVCIWQHLRTL*VMAFHL Trigger: CAAGTGGAAGGCCATAACCAACAAGGTGCGCAGGTG...CTGCCAAATGCAGACTGCTCCATATTCCAATCTTGTCCTCCTCTTCTCTGGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062638.8 |
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CDS-3UTR CAA 90 bp | CCTGCCTCGTGGCTGTCCATATTTTCCTGTGTAGGTTGTCATTTTATGCACCTCTGGCTTCATCTCATCTaGCTGCCTTCTCCCTTTGAC | + |
Preference number: 5 (lower is better) Translates to: PASWLSIFSCVGCHFMHLWLHLI*LPSPFD Trigger: GTCAAAGGGAGAAGGCAGCAAGATGAGATGAAGCCA...GAGGTGCATAAAATGACAACCTACACAGGAAAATATGGACAGCCACGAGGCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062638.8 |
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CDS-3UTR CAA 90 bp | CATAGCAAAGAGTGGATTGCTGCTTCCAGCCACCAAATGTGCAATCCTTTGATAGTTATGGCCTTCCACTaGGTCAGGTTAACCTTTTCA | + |
Preference number: 5 (lower is better) Translates to: HSKEWIAASSHQMCNPLIVMAFH*VRLTFS Trigger: TGAAAAGGTTAACCTGACCAAGTGGAAGGCCATAAC...TATCAAAGGATTGCACATTTGGTGGCTGGAAGCAGCAATCCACTCTTTGCTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062638.8 |
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CDS-3UTR CAA 90 bp | ATTCCAGAGAAGAGGAGGACAAGATTGGAATATGGAGCAGTCTGCATTTGGCAGACCTTTTCAATCCCTTaGCTTATTAAGTCACTGAAG | + |
Preference number: 5 (lower is better) Translates to: IPEKRRTRLEYGAVCIWQTFSIP*LIKSLK Trigger: CTTCAGTGACTTAATAAGCAAAGGGATTGAAAAGGT...CTGCCAAATGCAGACTGCTCCATATTCCAATCTTGTCCTCCTCTTCTCTGGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062638.8 |