RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAM243 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000051728

Ensembl transcript IDs: ENSMUST00000062638.8

Found 65 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTGAGCTGTCACACTTGGGAAACATTCATCGCTAGACCTTGGACCTaGCTAGCTGGCCAGGTTCACGCTGCCGACCCTGTGGCACCTGCC +
Preference number: 1 (lower is better)
Translates to: LSCHTWETFIARPWT*LAGQVHAADPVAPA
Trigger: GGCAGGTGCCACAGGGTCGGCAGCGTGAACCTGGCCAGCTAGGCAGGTCCAAGGTCTAGCGATGAATGTTTCCCAAGTGTGACAGCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062638.8
3UTR CCA 90 bp CAGTTGCCTCTCACCACCACTACCTCCCAGAGGGATAGCCCCGGCTaGACCACTGTATGCACGTGTCTCTTGCTCATGGCAAGGCGGATG +
Preference number: 1 (lower is better)
Translates to: QLPLTTTTSQRDSPG*TTVCTCLLLMARRM
Trigger: CATCCGCCTTGCCATGAGCAAGAGACACGTGCATACAGTGGTCCAGCCGGGGCTATCCCTCTGGGAGGTAGTGGTGGTGAGAGGCAACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062638.8
3UTR CCA 90 bp TTTTTACTGAGCTGTCACACTTGGGAAACATTCATCGCTAGACCTTaGACCTGCCTAGCTGGCCAGGTTCACGCTGCCGACCCTGTGGCA +
Preference number: 1 (lower is better)
Translates to: FLLSCHTWETFIARP*TCLAGQVHAADPVA
Trigger: TGCCACAGGGTCGGCAGCGTGAACCTGGCCAGCTAGGCAGGTCCAAGGTCTAGCGATGAATGTTTCCCAAGTGTGACAGCTCAGTAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000062638.8
3UTR TCA 90 bp GCAAAGAGTGGATTGCTGCTTCCAGCCACCAAATGTGCAATCCTTTaGTACGGCAGCCACCAGCTCACACAGCACGGTGTAAGAGTTGGA +
Preference number: 1 (lower is better)
Translates to: AKSGLLLPATKCAIL*YGSHQLTQHGVRVG
Trigger: TCCAACTCTTACACCGTGCTGTGTGAGCTGGTGGCTGCCGTATCAAAGGATTGCACATTTGGTGGCTGGAAGCAGCAATCCACTCTTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062638.8
3UTR GCA 90 bp AAGATTCCAGAGAAGAGGAGGACAAGATTGGAATATGGAGCAGTCTaGATTTGGCAGCGGCCTGGCTTCGCAACTCCACCCACAGTCAAA +
Preference number: 1 (lower is better)
Translates to: KIPEKRRTRLEYGAV*IWQRPGFATPPTVK
Trigger: TTTGACTGTGGGTGGAGTTGCGAAGCCAGGCCGCTGCCAAATGCAGACTGCTCCATATTCCAATCTTGTCCTCCTCTTCTCTGGAATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062638.8
3UTR CCA 90 bp ATAACACAGGAAGATTCCAGAGAAGAGGAGGACAAGATTGGAATATaGAGCAGTCTGCATTTGGCAGCGGCCTGGCTTCGCAACTCCACC +
Preference number: 1 (lower is better)
Translates to: ITQEDSREEEDKIGI*SSLHLAAAWLRNST
Trigger: GGTGGAGTTGCGAAGCCAGGCCGCTGCCAAATGCAGACTGCTCCATATTCCAATCTTGTCCTCCTCTTCTCTGGAATCTTCCTGTGTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062638.8
3UTR TCA 90 bp AGCATTAACGCTCCAGGTGGCTCTGTTCATCCCACGGCCTCTTTCTaGATAACACAGGAAGATTCCAGAGAAGAGGAGGACAAGATTGGA +
Preference number: 1 (lower is better)
Translates to: SINAPGGSVHPTASF*ITQEDSREEEDKIG
Trigger: TCCAATCTTGTCCTCCTCTTCTCTGGAATCTTCCTGTGTTATTCAGAAAGAGGCCGTGGGATGAACAGAGCCACCTGGAGCGTTAATGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062638.8
3UTR TCA 90 bp AGCCATGCTGCTTACAGCTTGATTCACATCAGTGAGACTGATGTCTaGCTCCCGATAGCCAGCATAGCAAAGAGTGGATTGCTGCTTCCA +
Preference number: 1 (lower is better)
Translates to: SHAAYSLIHISETDV*LPIASIAKSGLLLP
Trigger: TGGAAGCAGCAATCCACTCTTTGCTATGCTGGCTATCGGGAGTCAGACATCAGTCTCACTGATGTGAATCAAGCTGTAAGCAGCATGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062638.8
3UTR CCA 90 bp TTTCTGAATAACACAGGAAGATTCCAGAGAAGAGGAGGACAAGATTaGAATATGGAGCAGTCTGCATTTGGCAGCGGCCTGGCTTCGCAA +
Preference number: 1 (lower is better)
Translates to: FLNNTGRFQRRGGQD*NMEQSAFGSGLASQ
Trigger: TTGCGAAGCCAGGCCGCTGCCAAATGCAGACTGCTCCATATTCCAATCTTGTCCTCCTCTTCTCTGGAATCTTCCTGTGTTATTCAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062638.8
3UTR TCA 90 bp CCAATAACTCCCATAAACGTGGTCCTCAGGGTAGCCATCACAAGATaGGAGTTGATACCCTGTACTTATCAACAAACTTTAATGGAGCCT +
Preference number: 1 (lower is better)
Translates to: PITPINVVLRVAITR*ELIPCTYQQTLMEP
Trigger: AGGCTCCATTAAAGTTTGTTGATAAGTACAGGGTATCAACTCTCATCTTGTGATGGCTACCCTGAGGACCACGTTTATGGGAGTTATTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062638.8
3UTR-3UTR CCA 90 bp AAAGAGTGGATTGCTGCTTCCAGCCACCAAATGTGCAATCCTTTGATACGGCAGGCCCACAGCGCCCCCTaGGGCTTGAGCAGGGTGTTG +
Preference number: 2 (lower is better)
Translates to: KEWIAASSHQMCNPLIRQAHSAP*GLSRVL
Trigger: CAACACCCTGCTCAAGCCCCAGGGGGCGCTGTGGGC...CTGCCGTATCAAAGGATTGCACATTTGGTGGCTGGAAGCAGCAATCCACTCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000062638.8
3UTR-3UTR GCA 90 bp AGTCTGCATTTGGCAGCGGCCTGGCTTCGCAACTCCACCCACAGTCAAATCCGCCAAGTAGAGTTCTTGTaGCCTTTCTGCTCCTGCCTC +
Preference number: 2 (lower is better)
Translates to: SLHLAAAWLRNSTHSQIRQVEFL*PFCSCL
Trigger: GAGGCAGGAGCAGAAAGGGCACAAGAACTCTACTTG...GCGGATTTGACTGTGGGTGGAGTTGCGAAGCCAGGCCGCTGCCAAATGCAGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062638.8
3UTR-3UTR CCA 90 bp AGTCTGCATTTGGCAGCGGCCTGGCTTCGCAACTCCACCCACAGTCAAATCCGCGGGATTCTTGCAGGTTaGATATGTGGGTTCCATCGT +
Preference number: 2 (lower is better)
Translates to: SLHLAAAWLRNSTHSQIRGILAG*ICGFHR
Trigger: ACGATGGAACCCACATATCCAACCTGCAAGAATCCC...GCGGATTTGACTGTGGGTGGAGTTGCGAAGCCAGGCCGCTGCCAAATGCAGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062638.8
3UTR-3UTR CCA 90 bp CCTGTGGCACCTGCCACTGGTGCTGCCACTGTGGCTGTTGCTATCGATGCTGCCGACAAGATTGGAATATaGAGCAGTCTGCATTTGGCA +
Preference number: 2 (lower is better)
Translates to: PVAPATGAATVAVAIDAADKIGI*SSLHLA
Trigger: TGCCAAATGCAGACTGCTCCATATTCCAATCTTGTC...GGCAGCATCGATAGCAACAGCCACAGTGGCAGCACCAGTGGCAGGTGCCACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062638.8
3UTR-3UTR TCA 90 bp GCTGTCCATATTTTCCTGTGTAGGTTGTCATTTTATGCACCTCAGAGTAACTACGCGCCCCCTGGGGCTTaGGCAGGGTGTTGTGCCAAC +
Preference number: 2 (lower is better)
Translates to: AVHIFLCRLSFYAPQSNYAPPGA*AGCCAN
Trigger: GTTGGCACAACACCCTGCTCAAGCCCCAGGGGGCGC...GTAGTTACTCTGAGGTGCATAAAATGACAACCTACACAGGAAAATATGGACAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000062638.8
3UTR-3UTR CCA 90 bp AGTAGAGTTCTTGTGCCCTTTCTGCTCCTGCCTCGTGGCTGTCCATATTTTCCTCGTGTCTCTTGCTCATaGCAAGGCGGATGCTTGTGG +
Preference number: 2 (lower is better)
Translates to: SRVLVPFLLLPRGCPYFPRVSCS*QGGCLW
Trigger: CCACAAGCATCCGCCTTGCCATGAGCAAGAGACACG...AGGAAAATATGGACAGCCACGAGGCAGGAGCAGAAAGGGCACAAGAACTCTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062638.8
3UTR-3UTR TCA 90 bp CCTGCCTCGTGGCTGTCCATATTTTCCTGTGTAGGTTGTCATTTTATGCACCTCCAAGAACCTCCCCGTTaGGGCAGTAATCCCTCAAGG +
Preference number: 2 (lower is better)
Translates to: PASWLSIFSCVGCHFMHLQEPPR*GSNPSR
Trigger: CCTTGAGGGATTACTGCCTCAACGGGGAGGTTCTTG...GAGGTGCATAAAATGACAACCTACACAGGAAAATATGGACAGCCACGAGGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000062638.8
3UTR-3UTR TCA 90 bp AGTCTGCATTTGGCAGCGGCCTGGCTTCGCAACTCCACCCACAGTCAAATCCGCTCACAAGATGAGAGTTaGTACCCTGTACTTATCAAC +
Preference number: 2 (lower is better)
Translates to: SLHLAAAWLRNSTHSQIRSQDES*YPVLIN
Trigger: GTTGATAAGTACAGGGTATCAACTCTCATCTTGTGA...GCGGATTTGACTGTGGGTGGAGTTGCGAAGCCAGGCCGCTGCCAAATGCAGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062638.8
3UTR-3UTR GCA 90 bp ATTCCAGAGAAGAGGAGGACAAGATTGGAATATGGAGCAGTCTGCATTTGGCAGTCCGGATGGGATTCTTaGAGGTTGGATATGTGGGTT +
Preference number: 2 (lower is better)
Translates to: IPEKRRTRLEYGAVCIWQSGWDS*RLDMWV
Trigger: AACCCACATATCCAACCTGCAAGAATCCCATCCGGA...CTGCCAAATGCAGACTGCTCCATATTCCAATCTTGTCCTCCTCTTCTCTGGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062638.8
3UTR-3UTR TCA 90 bp TCCATATTTTCCTGTGTAGGTTGTCATTTTATGCACCTCAGAGTAACTACTTCTGACCCCTTGAACCTTTaGTGTCTCCATGGCTCCCTT +
Preference number: 2 (lower is better)
Translates to: SIFSCVGCHFMHLRVTTSDPLNL*CLHGSL
Trigger: AAGGGAGCCATGGAGACATCAAAGGTTCAAGGGGTC...AGAAGTAGTTACTCTGAGGTGCATAAAATGACAACCTACACAGGAAAATATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000062638.8
3UTR TCA 72 bp CACAGACCCTTCCGGCCCACAGCGCCCCCTGGGGCTTaGGCAGGGTGTTGTGCCAACTGCAGTAGCTCAGCT +
Preference number: 3 (lower is better)
Translates to: HRPFRPTAPPGA*AGCCANCSSSA
Trigger: AGCTGAGCTACTGCAGTTGGCACAACACCCTGCTCAAGCCCCAGGGGGCGCTGTGGGCCGGAAGGGTCTGTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000062638.8
3UTR GCA 72 bp TCACGCTGCCGACCCTGTGGCACCTGCCACTGGTGCTaGCACTGTGGCTGTTGCTATCGATGCTGCCGTAGC +
Preference number: 3 (lower is better)
Translates to: SRCRPCGTCHWC*HCGCCYRCCRS
Trigger: GCTACGGCAGCATCGATAGCAACAGCCACAGTGGCAGCACCAGTGGCAGGTGCCACAGGGTCGGCAGCGTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062638.8
3UTR GCA 72 bp GGTTCACGCTGCCGACCCTGTGGCACCTGCCACTGGTaGTGCCACTGTGGCTGTTGCTATCGATGCTGCCGT +
Preference number: 3 (lower is better)
Translates to: GSRCRPCGTCHW*CHCGCCYRCCR
Trigger: ACGGCAGCATCGATAGCAACAGCCACAGTGGCAGCACCAGTGGCAGGTGCCACAGGGTCGGCAGCGTGAACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062638.8
3UTR GCA 72 bp AGCTGGCCAGGTTCACGCTGCCGACCCTGTGGCACCTaGCACTGGTGCTGCCACTGTGGCTGTTGCTATCGA +
Preference number: 3 (lower is better)
Translates to: SWPGSRCRPCGT*HWCCHCGCCYR
Trigger: TCGATAGCAACAGCCACAGTGGCAGCACCAGTGGCAGGTGCCACAGGGTCGGCAGCGTGAACCTGGCCAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062638.8
3UTR CCA 72 bp CCAGGTTCACGCTGCCGACCCTGTGGCACCTGCCACTaGTGCTGCCACTGTGGCTGTTGCTATCGATGCTGC +
Preference number: 3 (lower is better)
Translates to: PGSRCRPCGTCH*CCHCGCCYRCC
Trigger: GCAGCATCGATAGCAACAGCCACAGTGGCAGCACCAGTGGCAGGTGCCACAGGGTCGGCAGCGTGAACCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062638.8
3UTR CCA 72 bp AGGGTAAGTGGGCCATCAGAACCTGGGAGACACTTGTaGCAGCCTTCCCTAGAGCCCCCGGCAGTACAGCCA +
Preference number: 3 (lower is better)
Translates to: RVSGPSEPGRHL*QPSLEPPAVQP
Trigger: TGGCTGTACTGCCGGGGGCTCTAGGGAAGGCTGCCACAAGTGTCTCCCAGGTTCTGATGGCCCACTTACCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000062638.8
3UTR-3UTR CAA 90 bp CCTGTGGCACCTGCCACTGGTGCTGCCACTGTGGCTGTTGCTATCGATGCTGCCCTCCGGATGGGATTCTaGCAGGTTGGATATGTGGGT +
Preference number: 3 (lower is better)
Translates to: PVAPATGAATVAVAIDAALRMGF*QVGYVG
Trigger: ACCCACATATCCAACCTGCAAGAATCCCATCCGGAG...GGCAGCATCGATAGCAACAGCCACAGTGGCAGCACCAGTGGCAGGTGCCACAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062638.8
3UTR TCA 72 bp GGCCCCACCCATTTGCCTTGGACATATGGAGCGGTTTaGCTACCTCGCAGTTGCCTCTCACCACCACTACCT +
Preference number: 3 (lower is better)
Translates to: GPTHLPWTYGAV*LPRSCLSPPLP
Trigger: AGGTAGTGGTGGTGAGAGGCAACTGCGAGGTAGTCAAACCGCTCCATATGTCCAAGGCAAATGGGTGGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062638.8
3UTR CCA 72 bp GCTCCCTTTTGGCCCCACCCATTTGCCTTGGACATATaGAGCGGTTTGACTACCTCGCAGTTGCCTCTCACC +
Preference number: 3 (lower is better)
Translates to: APFWPHPFALDI*SGLTTSQLPLT
Trigger: GGTGAGAGGCAACTGCGAGGTAGTCAAACCGCTCCATATGTCCAAGGCAAATGGGTGGGGCCAAAAGGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062638.8
3UTR CCA 72 bp CAGCCTTTGGACTCTCCGGATGGGATTCTTGCAGGTTaGATATGTGGGTTCCATCGTCCTCCCATCCCCCAC +
Preference number: 3 (lower is better)
Translates to: QPLDSPDGILAG*ICGFHRPPIPH
Trigger: GTGGGGGATGGGAGGACGATGGAACCCACATATCCAACCTGCAAGAATCCCATCCGGAGAGTCCAAAGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000062638.8
3UTR CCA 72 bp AGCTGTCACACTTGGGAAACATTCATCGCTAGACCTTaGACCTGCCTAGCTGGCCAGGTTCACGCTGCCGAC +
Preference number: 3 (lower is better)
Translates to: SCHTWETFIARP*TCLAGQVHAAD
Trigger: GTCGGCAGCGTGAACCTGGCCAGCTAGGCAGGTCCAAGGTCTAGCGATGAATGTTTCCCAAGTGTGACAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062638.8
3UTR-3UTR CAA 90 bp AAGGGTAAGTGGGCCATCAGAACCTGGGAGACACTTGTGGCAGCCTTCCCTAGATTTGGCCCCACCCATTaGCCTTGGACATATGGAGCG +
Preference number: 3 (lower is better)
Translates to: KGKWAIRTWETLVAAFPRFGPTH*PWTYGA
Trigger: CGCTCCATATGTCCAAGGCAAATGGGTGGGGCCAAA...TCTAGGGAAGGCTGCCACAAGTGTCTCCCAGGTTCTGATGGCCCACTTACCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062638.8
3UTR TCA 72 bp TGCCACTGTGGCTGTTGCTATCGATGCTGCCGTAGCTaGCCATTCACAGGAAGAGACCTCTGCTACCTGTCC +
Preference number: 3 (lower is better)
Translates to: CHCGCCYRCCRS*PFTGRDLCYLS
Trigger: GGACAGGTAGCAGAGGTCTCTTCCTGTGAATGGTCAGCTACGGCAGCATCGATAGCAACAGCCACAGTGGCA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062638.8
3UTR CCA 72 bp AGGAGGACAAGATTGGAATATGGAGCAGTCTGCATTTaGCAGCGGCCTGGCTTCGCAACTCCACCCACAGTC +
Preference number: 3 (lower is better)
Translates to: RRTRLEYGAVCI*QRPGFATPPTV
Trigger: GACTGTGGGTGGAGTTGCGAAGCCAGGCCGCTGCCAAATGCAGACTGCTCCATATTCCAATCTTGTCCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062638.8
3UTR CCA 72 bp CTTCTTGGACAGCAGATGACTCTAGCCAAGGGTAAGTaGGCCATCAGAACCTGGGAGACACTTGTGGCAGCC +
Preference number: 3 (lower is better)
Translates to: LLGQQMTLAKGK*AIRTWETLVAA
Trigger: GGCTGCCACAAGTGTCTCCCAGGTTCTGATGGCCCACTTACCCTTGGCTAGAGTCATCTGCTGTCCAAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062638.8
3UTR TCA 72 bp GGATTGCTGCTTCCAGCCACCAAATGTGCAATCCTTTaGTACGGCAGCCACCAGCTCACACAGCACGGTGTA +
Preference number: 3 (lower is better)
Translates to: GLLLPATKCAIL*YGSHQLTQHGV
Trigger: TACACCGTGCTGTGTGAGCTGGTGGCTGCCGTATCAAAGGATTGCACATTTGGTGGCTGGAAGCAGCAATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062638.8
3UTR TCA 72 bp AGAGCCCCCGGCAGTACAGCCATGCTGCTTACAGCTTaGTTCACATCAGTGAGACTGATGTCTGACTCCCGA +
Preference number: 3 (lower is better)
Translates to: RAPGSTAMLLTA*FTSVRLMSDSR
Trigger: TCGGGAGTCAGACATCAGTCTCACTGATGTGAATCAAGCTGTAAGCAGCATGGCTGTACTGCCGGGGGCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000062638.8
3UTR TCA 72 bp GCTCCAGGTGGCTCTGTTCATCCCACGGCCTCTTTCTaGATAACACAGGAAGATTCCAGAGAAGAGGAGGAC +
Preference number: 3 (lower is better)
Translates to: APGGSVHPTASF*ITQEDSREEED
Trigger: GTCCTCCTCTTCTCTGGAATCTTCCTGTGTTATTCAGAAAGAGGCCGTGGGATGAACAGAGCCACCTGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062638.8
3UTR GCA 72 bp AGCAAAGAGTGGATTGCTGCTTCCAGCCACCAAATGTaGAATCCTTTGATACGGCAGCCACCAGCTCACACA +
Preference number: 3 (lower is better)
Translates to: SKEWIAASSHQM*NPLIRQPPAHT
Trigger: TGTGTGAGCTGGTGGCTGCCGTATCAAAGGATTGCACATTTGGTGGCTGGAAGCAGCAATCCACTCTTTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062638.8
3UTR CCA 72 bp TATTGCTTGAGCATACATAAGGAAAAAGGCGCTTTGTaGTCGGTTTCACAGGCGCCGGGCTTTTCCTGTAGC +
Preference number: 3 (lower is better)
Translates to: YCLSIHKEKGAL*SVSQAPGFSCS
Trigger: GCTACAGGAAAAGCCCGGCGCCTGTGAAACCGACCACAAAGCGCCTTTTTCCTTATGTATGCTCAAGCAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000062638.8
3UTR GCA 72 bp AGGTTCAGCAAAACTGAAGACCAAGTAGAGTTCTTGTaGCCTTTCTGCTCCTGCCTCGTGGCTGTCCATATT +
Preference number: 3 (lower is better)
Translates to: RFSKTEDQVEFL*PFCSCLVAVHI
Trigger: AATATGGACAGCCACGAGGCAGGAGCAGAAAGGGCACAAGAACTCTACTTGGTCTTCAGTTTTGCTGAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062638.8
3UTR CCA 72 bp GATCATCCGAGACTGTTTTTACTGAGCTGTCACACTTaGGAAACATTCATCGCTAGACCTTGGACCTGCCTA +
Preference number: 3 (lower is better)
Translates to: DHPRLFLLSCHT*ETFIARPWTCL
Trigger: TAGGCAGGTCCAAGGTCTAGCGATGAATGTTTCCCAAGTGTGACAGCTCAGTAAAAACAGTCTCGGATGATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000062638.8
3UTR CAA 72 bp TGGCCCCACCCATTTGCCTTGGACATATGGAGCGGTTaGACTACCTCGCAGTTGCCTCTCACCACCACTACC +
Preference number: 4 (lower is better)
Translates to: WPHPFALDIWSG*TTSQLPLTTTT
Trigger: GGTAGTGGTGGTGAGAGGCAACTGCGAGGTAGTCAAACCGCTCCATATGTCCAAGGCAAATGGGTGGGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062638.8
3UTR CAA 72 bp GCAGCCTTTGGACTCTCCGGATGGGATTCTTGCAGGTaGGATATGTGGGTTCCATCGTCCTCCCATCCCCCA +
Preference number: 4 (lower is better)
Translates to: AAFGLSGWDSCR*DMWVPSSSHPP
Trigger: TGGGGGATGGGAGGACGATGGAACCCACATATCCAACCTGCAAGAATCCCATCCGGAGAGTCCAAAGGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000062638.8
3UTR CAA 72 bp CGCAGTGGCAGCCTTTGGACTCTCCGGATGGGATTCTaGCAGGTTGGATATGTGGGTTCCATCGTCCTCCCA +
Preference number: 4 (lower is better)
Translates to: RSGSLWTLRMGF*QVGYVGSIVLP
Trigger: TGGGAGGACGATGGAACCCACATATCCAACCTGCAAGAATCCCATCCGGAGAGTCCAAAGGCTGCCACTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062638.8
3UTR CAA 72 bp GTCTCCATGGCTCCCTTTTGGCCCCACCCATTTGCCTaGGACATATGGAGCGGTTTGACTACCTCGCAGTTG +
Preference number: 4 (lower is better)
Translates to: VSMAPFWPHPFA*DIWSGLTTSQL
Trigger: CAACTGCGAGGTAGTCAAACCGCTCCATATGTCCAAGGCAAATGGGTGGGGCCAAAAGGGAGCCATGGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062638.8
3UTR CAA 72 bp GAGGAGGACAAGATTGGAATATGGAGCAGTCTGCATTaGGCAGCGGCCTGGCTTCGCAACTCCACCCACAGT +
Preference number: 4 (lower is better)
Translates to: EEDKIGIWSSLH*AAAWLRNSTHS
Trigger: ACTGTGGGTGGAGTTGCGAAGCCAGGCCGCTGCCAAATGCAGACTGCTCCATATTCCAATCTTGTCCTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062638.8
3UTR CAA 72 bp TGGATTGCTGCTTCCAGCCACCAAATGTGCAATCCTTaGATACGGCAGCCACCAGCTCACACAGCACGGTGT +
Preference number: 4 (lower is better)
Translates to: WIAASSHQMCNP*IRQPPAHTARC
Trigger: ACACCGTGCTGTGTGAGCTGGTGGCTGCCGTATCAAAGGATTGCACATTTGGTGGCTGGAAGCAGCAATCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062638.8
3UTR CAA 72 bp ACAAACTTTAATGGAGCCTCTGTCAACCCCAGGACTTaGCTGGTAGCCCTCAAGAACCTCCCCGTTGAGGCA +
Preference number: 4 (lower is better)
Translates to: TNFNGASVNPRT*LVALKNLPVEA
Trigger: TGCCTCAACGGGGAGGTTCTTGAGGGCTACCAGCAAAGTCCTGGGGTTGACAGAGGCTCCATTAAAGTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062638.8
CDS-3UTR TCA 90 bp GGACATATGGAGCGGTTTGACTACCTCGCAGTTGCCTCTCACCACCACTACCTCGGCTGTCTTCCTTCTTaGTGCACAGGTCATTTCTCA +
Preference number: 4 (lower is better)
Translates to: GHMERFDYLAVASHHHYLGCLPS*CTGHFS
Trigger: TGAGAAATGACCTGTGCATCAAGAAGGAAGACAGCC...GAGGTAGTGGTGGTGAGAGGCAACTGCGAGGTAGTCAAACCGCTCCATATGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062638.8
CDS-3UTR GCA 90 bp AAGGGTAAGTGGGCCATCAGAACCTGGGAGACACTTGTGGCAGCCTTCCCTAGATTCATCTCATCTTGCTaGCTTCTCCCTTTGACCACG +
Preference number: 4 (lower is better)
Translates to: KGKWAIRTWETLVAAFPRFISSC*LLPLTT
Trigger: CGTGGTCAAAGGGAGAAGGCAGCAAGATGAGATGAA...TCTAGGGAAGGCTGCCACAAGTGTCTCCCAGGTTCTGATGGCCCACTTACCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062638.8
3UTR CAA 72 bp TCTAGGTTCAGCAAAACTGAAGACCAAGTAGAGTTCTaGTGCCCTTTCTGCTCCTGCCTCGTGGCTGTCCAT +
Preference number: 4 (lower is better)
Translates to: SRFSKTEDQVEF*CPFCSCLVAVH
Trigger: ATGGACAGCCACGAGGCAGGAGCAGAAAGGGCACAAGAACTCTACTTGGTCTTCAGTTTTGCTGAACCTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062638.8
3UTR CAA 72 bp AGTTATTGCTTGAGCATACATAAGGAAAAAGGCGCTTaGTGGTCGGTTTCACAGGCGCCGGGCTTTTCCTGT +
Preference number: 4 (lower is better)
Translates to: SYCLSIHKEKGA*WSVSQAPGFSC
Trigger: ACAGGAAAAGCCCGGCGCCTGTGAAACCGACCACAAAGCGCCTTTTTCCTTATGTATGCTCAAGCAATAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000062638.8
CDS-3UTR GCA 90 bp CCTGCCTCGTGGCTGTCCATATTTTCCTGTGTAGGTTGTCATTTTATGCACCTCAATAGTTCTCCCACCTaGGCACCTTGTTGGTTATGG +
Preference number: 4 (lower is better)
Translates to: PASWLSIFSCVGCHFMHLNSSPT*APCWLW
Trigger: CCATAACCAACAAGGTGCGCAGGTGGGAGAACTATT...GAGGTGCATAAAATGACAACCTACACAGGAAAATATGGACAGCCACGAGGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062638.8
CDS-3UTR CCA 90 bp ATGGTGAGTCAGAATCAGACTCCACAGTTAGCAGCAAAGAGCATACAGCTCAGGCTCCTTGTCTGTCTTTaGCTTCATCTCATCTTGCTG +
Preference number: 4 (lower is better)
Translates to: MVSQNQTPQLAAKSIQLRLLVCL*LHLILL
Trigger: CAGCAAGATGAGATGAAGCCAAAGACAGACAAGGAG...CCTGAGCTGTATGCTCTTTGCTGCTAACTGTGGAGTCTGATTCTGACTCACCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062638.8
3UTR CAA 72 bp TCCTGCCTCGTGGCTGTCCATATTTTCCTGTGTAGGTaGTCATTTTATGCACCTCAGAGTAACTACTTCTGT +
Preference number: 4 (lower is better)
Translates to: SCLVAVHIFLCR*SFYAPQSNYFC
Trigger: ACAGAAGTAGTTACTCTGAGGTGCATAAAATGACAACCTACACAGGAAAATATGGACAGCCACGAGGCAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062638.8
CDS-3UTR GCA 90 bp TCCATATTTTCCTGTGTAGGTTGTCATTTTATGCACCTCAGAGTAACTACTTCTGGCTTCATCTCATCTTaGTGCCTTCTCCCTTTGACC +
Preference number: 4 (lower is better)
Translates to: SIFSCVGCHFMHLRVTTSGFISS*CLLPLT
Trigger: GGTCAAAGGGAGAAGGCAGCAAGATGAGATGAAGCC...AGAAGTAGTTACTCTGAGGTGCATAAAATGACAACCTACACAGGAAAATATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062638.8
CDS CCA 90 bp GCTTGTTGGGACATAGGCCTTGGCCTCCCCCTCCTTGTCTGTCTTTaGCTTCATCTCATCTTGCTGCCTTCTCCCTTTGACCACGATGGC +
Preference number: 5 (lower is better)
Translates to: ACWDIGLGLPLLVCL*LHLILLPSPFDHDG
Trigger: GCCATCGTGGTCAAAGGGAGAAGGCAGCAAGATGAGATGAAGCCAAAGACAGACAAGGAGGGGGAGGCCAAGGCCTATGTCCCAACAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000062638.8
CDS-3UTR CAA 90 bp ACTCTAGCCAAGGGTAAGTGGGCCATCAGAACCTGGGAGACACTTGTGGCAGCCAGGCTGTCTTCCTTCTaGATGCACAGGTCATTTCTC +
Preference number: 5 (lower is better)
Translates to: TLAKGKWAIRTWETLVAARLSSF*MHRSFL
Trigger: GAGAAATGACCTGTGCATCAAGAAGGAAGACAGCCT...GGCTGCCACAAGTGTCTCCCAGGTTCTGATGGCCCACTTACCCTTGGCTAGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062638.8
CDS TCA 90 bp CCTTGTCTGTCTTTGGCTTCATCTCATCTTGCTGCCTTCTCCCTTTaGCCACGATGGCACACTTGCCATAGGCCCTCTTCACAACATCAC +
Preference number: 5 (lower is better)
Translates to: PCLSLASSHLAAFSL*PRWHTCHRPSSQHH
Trigger: GTGATGTTGTGAAGAGGGCCTATGGCAAGTGTGCCATCGTGGTCAAAGGGAGAAGGCAGCAAGATGAGATGAAGCCAAAGACAGACAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062638.8
CDS-3UTR CAA 90 bp AAGGGTAAGTGGGCCATCAGAACCTGGGAGACACTTGTGGCAGCCTTCCCTAGACCAAAATACACGGTCTaGTATCCATTGTGTTGCAGC +
Preference number: 5 (lower is better)
Translates to: KGKWAIRTWETLVAAFPRPKYTV*YPLCCS
Trigger: GCTGCAACACAATGGATACAAGACCGTGTATTTTGG...TCTAGGGAAGGCTGCCACAAGTGTCTCCCAGGTTCTGATGGCCCACTTACCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062638.8
CDS-3UTR CAA 90 bp ATTCCAGAGAAGAGGAGGACAAGATTGGAATATGGAGCAGTCTGCATTTGGCAGCACCTGCGCACCTTGTaGGTTATGGCCTTCCACTTG +
Preference number: 5 (lower is better)
Translates to: IPEKRRTRLEYGAVCIWQHLRTL*VMAFHL
Trigger: CAAGTGGAAGGCCATAACCAACAAGGTGCGCAGGTG...CTGCCAAATGCAGACTGCTCCATATTCCAATCTTGTCCTCCTCTTCTCTGGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062638.8
CDS-3UTR CAA 90 bp CCTGCCTCGTGGCTGTCCATATTTTCCTGTGTAGGTTGTCATTTTATGCACCTCTGGCTTCATCTCATCTaGCTGCCTTCTCCCTTTGAC +
Preference number: 5 (lower is better)
Translates to: PASWLSIFSCVGCHFMHLWLHLI*LPSPFD
Trigger: GTCAAAGGGAGAAGGCAGCAAGATGAGATGAAGCCA...GAGGTGCATAAAATGACAACCTACACAGGAAAATATGGACAGCCACGAGGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062638.8
CDS-3UTR CAA 90 bp CATAGCAAAGAGTGGATTGCTGCTTCCAGCCACCAAATGTGCAATCCTTTGATAGTTATGGCCTTCCACTaGGTCAGGTTAACCTTTTCA +
Preference number: 5 (lower is better)
Translates to: HSKEWIAASSHQMCNPLIVMAFH*VRLTFS
Trigger: TGAAAAGGTTAACCTGACCAAGTGGAAGGCCATAAC...TATCAAAGGATTGCACATTTGGTGGCTGGAAGCAGCAATCCACTCTTTGCTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062638.8
CDS-3UTR CAA 90 bp ATTCCAGAGAAGAGGAGGACAAGATTGGAATATGGAGCAGTCTGCATTTGGCAGACCTTTTCAATCCCTTaGCTTATTAAGTCACTGAAG +
Preference number: 5 (lower is better)
Translates to: IPEKRRTRLEYGAVCIWQTFSIP*LIKSLK
Trigger: CTTCAGTGACTTAATAAGCAAAGGGATTGAAAAGGT...CTGCCAAATGCAGACTGCTCCATATTCCAATCTTGTCCTCCTCTTCTCTGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062638.8