Pregenerated sensors for FAM241B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020083Ensembl transcript IDs: ENSMUST00000027719.12, ENSMUST00000064050.5, ENSMUST00000124615.8, ENSMUST00000125704.8, ENSMUST00000141144.2, ENSMUST00000141724.8, ENSMUST00000142796.8, ENSMUST00000142821.8, ENSMUST00000150057.2, ENSMUST00000156798.2
Found 103 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCTCTGCCTCCTGCAGCGGGAGAAAAATCTACAAAGCCGGTCTCATaGCCATCACACCTTCTGAGCCCACCCAAGCTCCCTCCCCCTGTG | + |
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Preference number: 1 (lower is better) Translates to: PLPPAAGEKSTKPVS*PSHLLSPPKLPPPV Trigger: CACAGGGGGAGGGAGCTTGGGTGGGCTCAGAAGGTGTGATGGGCATGAGACCGGCTTTGTAGATTTTTCTCCCGCTGCAGGAGGCAGAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000064050.5 ENSMUST00000124615.8 ENSMUST00000125704.8 ENSMUST00000142796.8 ENSMUST00000142821.8 |
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| 3UTR TCA 90 bp | CACAGGAGGATCTCTGTGAGCTGGAGGCCGACCTGGTCTCCATGGTaGGTTCCAGGCCAGCCAAGGCTACACAGTGAGACTCCTCTGTCT | + |
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Preference number: 1 (lower is better) Translates to: HRRISVSWRPTWSPW*VPGQPRLHSETPLS Trigger: AGACAGAGGAGTCTCACTGTGTAGCCTTGGCTGGCCTGGAACTCACCATGGAGACCAGGTCGGCCTCCAGCTCACAGAGATCCTCCTGTG 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000064050.5 ENSMUST00000124615.8 ENSMUST00000125704.8 ENSMUST00000142796.8 ENSMUST00000142821.8 |
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| 3UTR TCA 90 bp | AGAGCTGCTGATGGCTGGACGAACGAACCTGAGCAGCCCCTGGGTTaGGCCCCTGAGCAAGACAGACCTCAGACATTCAATACACTCCAT | + |
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Preference number: 1 (lower is better) Translates to: RAADGWTNEPEQPLG*APEQDRPQTFNTLH Trigger: ATGGAGTGTATTGAATGTCTGAGGTCTGTCTTGCTCAGGGGCTCAACCCAGGGGCTGCTCAGGTTCGTTCGTCCAGCCATCAGCAGCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125704.8 |
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| 3UTR GCA 90 bp | CCACAGGACTCTCTTTTTCAGCAATGCTGGCCCAGAGAGTCCCTCTaGCTCCTGCAGCGGGAGAAAAATCTACAAAGCCGGTCTCATGCC | + |
|
Preference number: 1 (lower is better) Translates to: PQDSLFQQCWPRESL*LLQREKNLQSRSHA Trigger: GGCATGAGACCGGCTTTGTAGATTTTTCTCCCGCTGCAGGAGGCAGAGGGACTCTCTGGGCCAGCATTGCTGAAAAAGAGAGTCCTGTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000064050.5 ENSMUST00000124615.8 ENSMUST00000125704.8 ENSMUST00000142796.8 ENSMUST00000142821.8 |
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| 3UTR GCA 90 bp | ACTCTCTTTTTCAGCAATGCTGGCCCAGAGAGTCCCTCTGCCTCCTaGAGCGGGAGAAAAATCTACAAAGCCGGTCTCATGCCCATCACA | + |
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Preference number: 1 (lower is better) Translates to: TLFFSNAGPESPSAS*SGRKIYKAGLMPIT Trigger: TGTGATGGGCATGAGACCGGCTTTGTAGATTTTTCTCCCGCTGCAGGAGGCAGAGGGACTCTCTGGGCCAGCATTGCTGAAAAAGAGAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000064050.5 ENSMUST00000124615.8 ENSMUST00000125704.8 ENSMUST00000142796.8 ENSMUST00000142821.8 |
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| 3UTR CCA 90 bp | TTTATTGAAAATATCACAATAGCTGGGCACAGTATCACACACCTTTaGTCCCAACACTTGGGAGGAAGACACAGGAGGATCTCTGTGAGC | + |
|
Preference number: 1 (lower is better) Translates to: FIENITIAGHSITHL*SQHLGGRHRRISVS Trigger: GCTCACAGAGATCCTCCTGTGTCTTCCTCCCAAGTGTTGGGACCAAAGGTGTGTGATACTGTGCCCAGCTATTGTGATATTTTCAATAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000064050.5 ENSMUST00000124615.8 ENSMUST00000125704.8 ENSMUST00000142796.8 ENSMUST00000142821.8 |
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| 3UTR-3UTR GCA 90 bp | CCAACACTTGGGAGGAAGACACAGGAGGATCTCTGTGAGCTGGAGGCCGACCTGAGCTCCCTCCCCCTGTaGATGATGTCGCACCAAAGC | + |
|
Preference number: 2 (lower is better) Translates to: PTLGRKTQEDLCELEADLSSLPL*MMSHQS Trigger: GCTTTGGTGCGACATCATGCACAGGGGGAGGGAGCT...CAGGTCGGCCTCCAGCTCACAGAGATCCTCCTGTGTCTTCCTCCCAAGTGTTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000064050.5 ENSMUST00000124615.8 ENSMUST00000125704.8 ENSMUST00000142796.8 ENSMUST00000142821.8 |
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| 3UTR-3UTR TCA 90 bp | CCAACACTTGGGAGGAAGACACAGGAGGATCTCTGTGAGCTGGAGGCCGACCTGGCCAAGGCTACACAGTaGGACTCCTCTGTCTTGGAA | + |
|
Preference number: 2 (lower is better) Translates to: PTLGRKTQEDLCELEADLAKATQ*DSSVLE Trigger: TTCCAAGACAGAGGAGTCTCACTGTGTAGCCTTGGC...CAGGTCGGCCTCCAGCTCACAGAGATCCTCCTGTGTCTTCCTCCCAAGTGTTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000064050.5 ENSMUST00000124615.8 ENSMUST00000125704.8 ENSMUST00000142796.8 ENSMUST00000142821.8 |
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| 3UTR-3UTR TCA 90 bp | TTTAGCGGAAGCCCTATGCCCCCTAAAAACATTCCAGGAAACCACAGGACTCTCGCCCATCACACCTTCTaGGCCCACCCAAGCTCCCTC | + |
|
Preference number: 2 (lower is better) Translates to: FSGSPMPPKNIPGNHRTLAHHTF*AHPSSL Trigger: GAGGGAGCTTGGGTGGGCTCAGAAGGTGTGATGGGC...GAGAGTCCTGTGGTTTCCTGGAATGTTTTTAGGGGGCATAGGGCTTCCGCTAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000064050.5 ENSMUST00000124615.8 ENSMUST00000125704.8 ENSMUST00000142796.8 ENSMUST00000142821.8 |
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| 3UTR-3UTR TCA 90 bp | TACACTCCATTCTTTCACTCCTTACACACTCCGCCCCCAGTCATCCTAAGGACTACCTGGTCTCCATGGTaGGTTCCAGGCCAGCCAAGG | + |
|
Preference number: 2 (lower is better) Translates to: YTPFFHSLHTPPPVILRTTWSPW*VPGQPR Trigger: CCTTGGCTGGCCTGGAACTCACCATGGAGACCAGGT...AGTCCTTAGGATGACTGGGGGCGGAGTGTGTAAGGAGTGAAAGAATGGAGTGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125704.8 |
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| 3UTR-3UTR GCA 90 bp | GAGTTCCAGGCCAGCCAAGGCTACACAGTGAGACTCCTCTGTCTTGGAAAACCCTCTCTTTTTCAGCAATaGTGGCCCAGAGAGTCCCTC | + |
|
Preference number: 2 (lower is better) Translates to: EFQASQGYTVRLLCLGKPSLFQQ*WPRESL Trigger: GAGGGACTCTCTGGGCCAGCATTGCTGAAAAAGAGA...GGGTTTTCCAAGACAGAGGAGTCTCACTGTGTAGCCTTGGCTGGCCTGGAACTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000064050.5 ENSMUST00000124615.8 ENSMUST00000125704.8 ENSMUST00000142796.8 ENSMUST00000142821.8 |
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| 3UTR-3UTR GCA 90 bp | CCCAGCACCCTGTCTGAGAAAAATCCCCGACATCACAAGGTCAAAGGCCCTATCTCTCTTTTTCAGCAATaGTGGCCCAGAGAGTCCCTC | + |
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Preference number: 2 (lower is better) Translates to: PSTLSEKNPRHHKVKGPISLFQQ*WPRESL Trigger: GAGGGACTCTCTGGGCCAGCATTGCTGAAAAAGAGA...GATAGGGCCTTTGACCTTGTGATGTCGGGGATTTTTCTCAGACAGGGTGCTGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000125704.8 |
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| 3UTR-3UTR CCA 90 bp | CCAACACTTGGGAGGAAGACACAGGAGGATCTCTGTGAGCTGGAGGCCGACCTGATTGCTATAAAACTCTaGACAGTTCCCAGCTGCTCT | + |
|
Preference number: 2 (lower is better) Translates to: PTLGRKTQEDLCELEADLIAIKL*TVPSCS Trigger: AGAGCAGCTGGGAACTGTCCAGAGTTTTATAGCAAT...CAGGTCGGCCTCCAGCTCACAGAGATCCTCCTGTGTCTTCCTCCCAAGTGTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000064050.5 ENSMUST00000124615.8 ENSMUST00000125704.8 ENSMUST00000142796.8 ENSMUST00000142821.8 |
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| 3UTR-3UTR GCA 90 bp | AAGCCTTTCTTATTCCTGCTTGTGCTTTTTAGCGGAAGCCCTATGCCCCCTAAAAGCTCCCTCCCCCTGTaGATGATGTCGCACCAAAGC | + |
|
Preference number: 2 (lower is better) Translates to: KPFLFLLVLFSGSPMPPKSSLPL*MMSHQS Trigger: GCTTTGGTGCGACATCATGCACAGGGGGAGGGAGCT...TTTAGGGGGCATAGGGCTTCCGCTAAAAAGCACAAGCAGGAATAAGAAAGGCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 5 transcripts: ENSMUST00000064050.5 ENSMUST00000124615.8 ENSMUST00000125704.8 ENSMUST00000142796.8 ENSMUST00000142821.8 |
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| 3UTR-3UTR GCA 90 bp | CCAACACTTGGGAGGAAGACACAGGAGGATCTCTGTGAGCTGGAGGCCGACCTGAGCCTTTCTTATTCCTaGTTGTGCTTTTTAGCGGAA | + |
|
Preference number: 2 (lower is better) Translates to: PTLGRKTQEDLCELEADLSLSYS*LCFLAE Trigger: TTCCGCTAAAAAGCACAAGCAGGAATAAGAAAGGCT...CAGGTCGGCCTCCAGCTCACAGAGATCCTCCTGTGTCTTCCTCCCAAGTGTTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000064050.5 ENSMUST00000124615.8 ENSMUST00000125704.8 ENSMUST00000142796.8 ENSMUST00000142821.8 |
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| 3UTR-3UTR TCA 90 bp | GAATACAACATACTAAGCCTTTCTTATTCCTGCTTGTGCTTTTTAGCGGAAGCCGCCCATCACACCTTCTaGGCCCACCCAAGCTCCCTC | + |
|
Preference number: 2 (lower is better) Translates to: EYNILSLSYSCLCFLAEAAHHTF*AHPSSL Trigger: GAGGGAGCTTGGGTGGGCTCAGAAGGTGTGATGGGC...GGCTTCCGCTAAAAAGCACAAGCAGGAATAAGAAAGGCTTAGTATGTTGTATTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000064050.5 ENSMUST00000124615.8 ENSMUST00000125704.8 ENSMUST00000142796.8 ENSMUST00000142821.8 |
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| 3UTR-3UTR GCA 90 bp | GAGCAAGACAGACCTCAGACATTCAATACACTCCATTCTTTCACTCCTTACACACCCAGAGAGTCCCTCTaGCTCCTGCAGCGGGAGAAA | + |
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Preference number: 2 (lower is better) Translates to: EQDRPQTFNTLHSFTPYTPRESL*LLQREK Trigger: TTTCTCCCGCTGCAGGAGGCAGAGGGACTCTCTGGG...TGTGTAAGGAGTGAAAGAATGGAGTGTATTGAATGTCTGAGGTCTGTCTTGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125704.8 |
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| 3UTR-3UTR GCA 90 bp | CTACACAGTGAGACTCCTCTGTCTTGGAAAACCCAAAGAAAAGGAAAGATCATGAGCTCCCTCCCCCTGTaGATGATGTCGCACCAAAGC | + |
|
Preference number: 2 (lower is better) Translates to: LHSETPLSWKTQRKGKIMSSLPL*MMSHQS Trigger: GCTTTGGTGCGACATCATGCACAGGGGGAGGGAGCT...CATGATCTTTCCTTTTCTTTGGGTTTTCCAAGACAGAGGAGTCTCACTGTGTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000064050.5 ENSMUST00000124615.8 ENSMUST00000125704.8 ENSMUST00000142796.8 ENSMUST00000142821.8 |
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| 3UTR-3UTR GCA 90 bp | AAGGACACCATTAAAATGAAGGATTGCTATAAAACTCTGGACAGTTCCCAGCTGCCCAGAGAGTCCCTCTaGCTCCTGCAGCGGGAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: KDTIKMKDCYKTLDSSQLPRESL*LLQREK Trigger: TTTCTCCCGCTGCAGGAGGCAGAGGGACTCTCTGGG...CAGCTGGGAACTGTCCAGAGTTTTATAGCAATCCTTCATTTTAATGGTGTCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000064050.5 ENSMUST00000124615.8 ENSMUST00000125704.8 ENSMUST00000142796.8 ENSMUST00000142821.8 |
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| 3UTR-3UTR CCA 90 bp | AAGCCTTTCTTATTCCTGCTTGTGCTTTTTAGCGGAAGCCCTATGCCCCCTAAACTTTTTCAGCAATGCTaGCCCAGAGAGTCCCTCTGC | + |
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Preference number: 2 (lower is better) Translates to: KPFLFLLVLFSGSPMPPKLFQQC*PRESLC Trigger: GCAGAGGGACTCTCTGGGCCAGCATTGCTGAAAAAG...TTTAGGGGGCATAGGGCTTCCGCTAAAAAGCACAAGCAGGAATAAGAAAGGCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 5 transcripts: ENSMUST00000064050.5 ENSMUST00000124615.8 ENSMUST00000125704.8 ENSMUST00000142796.8 ENSMUST00000142821.8 |
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| 3UTR-3UTR CCA 90 bp | CATTCAATACACTCCATTCTTTCACTCCTTACACACTCCGCCCCCAGTCATCCTAGTATCACACACCTTTaGTCCCAACACTTGGGAGGA | + |
|
Preference number: 2 (lower is better) Translates to: HSIHSILSLLTHSAPSHPSITHL*SQHLGG Trigger: TCCTCCCAAGTGTTGGGACCAAAGGTGTGTGATACT...AGGATGACTGGGGGCGGAGTGTGTAAGGAGTGAAAGAATGGAGTGTATTGAATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125704.8 |
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| 3UTR-3UTR TCA 90 bp | GAGCAAGACAGACCTCAGACATTCAATACACTCCATTCTTTCACTCCTTACACATCCCAGCACCCTGTCTaGGAAAAATCCCCGACATCA | + |
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Preference number: 2 (lower is better) Translates to: EQDRPQTFNTLHSFTPYTSQHPV*EKSPTS Trigger: TGATGTCGGGGATTTTTCTCAGACAGGGTGCTGGGA...TGTGTAAGGAGTGAAAGAATGGAGTGTATTGAATGTCTGAGGTCTGTCTTGCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125704.8 |
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| 3UTR-3UTR CCA 90 bp | AAGGACACCATTAAAATGAAGGATTGCTATAAAACTCTGGACAGTTCCCAGCTGCTTTTTCAGCAATGCTaGCCCAGAGAGTCCCTCTGC | + |
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Preference number: 2 (lower is better) Translates to: KDTIKMKDCYKTLDSSQLLFQQC*PRESLC Trigger: GCAGAGGGACTCTCTGGGCCAGCATTGCTGAAAAAG...CAGCTGGGAACTGTCCAGAGTTTTATAGCAATCCTTCATTTTAATGGTGTCCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000064050.5 ENSMUST00000124615.8 ENSMUST00000125704.8 ENSMUST00000142796.8 ENSMUST00000142821.8 |
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| 3UTR-3UTR GCA 90 bp | GAATACAACATACTAAGCCTTTCTTATTCCTGCTTGTGCTTTTTAGCGGAAGCCTCTCTTTTTCAGCAATaGTGGCCCAGAGAGTCCCTC | + |
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Preference number: 2 (lower is better) Translates to: EYNILSLSYSCLCFLAEASLFQQ*WPRESL Trigger: GAGGGACTCTCTGGGCCAGCATTGCTGAAAAAGAGA...GGCTTCCGCTAAAAAGCACAAGCAGGAATAAGAAAGGCTTAGTATGTTGTATTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000064050.5 ENSMUST00000124615.8 ENSMUST00000125704.8 ENSMUST00000142796.8 ENSMUST00000142821.8 |
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| 3UTR-3UTR GCA 90 bp | AAGGACACCATTAAAATGAAGGATTGCTATAAAACTCTGGACAGTTCCCAGCTGAGCCTTTCTTATTCCTaGTTGTGCTTTTTAGCGGAA | + |
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Preference number: 2 (lower is better) Translates to: KDTIKMKDCYKTLDSSQLSLSYS*LCFLAE Trigger: TTCCGCTAAAAAGCACAAGCAGGAATAAGAAAGGCT...CAGCTGGGAACTGTCCAGAGTTTTATAGCAATCCTTCATTTTAATGGTGTCCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000064050.5 ENSMUST00000124615.8 ENSMUST00000125704.8 ENSMUST00000142796.8 ENSMUST00000142821.8 |
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| 3UTR TCA 72 bp | CCTTCTGAGCCCACCCAAGCTCCCTCCCCCTGTGCATaGTGTCGCACCAAAGCCCAGTCCAGTCAATCCTAC | + |
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Preference number: 3 (lower is better) Translates to: PSEPTQAPSPCA*CRTKAQSSQSY Trigger: GTAGGATTGACTGGACTGGGCTTTGGTGCGACATCATGCACAGGGGGAGGGAGCTTGGGTGGGCTCAGAAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000064050.5 ENSMUST00000124615.8 ENSMUST00000125704.8 ENSMUST00000142796.8 ENSMUST00000142821.8 |
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| 3UTR TCA 72 bp | ATCTCTGTGAGCTGGAGGCCGACCTGGTCTCCATGGTaGGTTCCAGGCCAGCCAAGGCTACACAGTGAGACT | + |
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Preference number: 3 (lower is better) Translates to: ISVSWRPTWSPW*VPGQPRLHSET Trigger: AGTCTCACTGTGTAGCCTTGGCTGGCCTGGAACTCACCATGGAGACCAGGTCGGCCTCCAGCTCACAGAGAT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000064050.5 ENSMUST00000124615.8 ENSMUST00000125704.8 ENSMUST00000142796.8 ENSMUST00000142821.8 |
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| 3UTR TCA 72 bp | CCCAACACTTGGGAGGAAGACACAGGAGGATCTCTGTaGGCTGGAGGCCGACCTGGTCTCCATGGTGAGTTC | + |
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Preference number: 3 (lower is better) Translates to: PNTWEEDTGGSL*AGGRPGLHGEF Trigger: GAACTCACCATGGAGACCAGGTCGGCCTCCAGCTCACAGAGATCCTCCTGTGTCTTCCTCCCAAGTGTTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000064050.5 ENSMUST00000124615.8 ENSMUST00000125704.8 ENSMUST00000142796.8 ENSMUST00000142821.8 |
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| 3UTR TCA 72 bp | AGGCGCTGGGACCTCCAGGCCAGCCAGTCTACAGAGTaGGTTCTAGGACAACCACGACTGCAGAGAGAGAGA | + |
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Preference number: 3 (lower is better) Translates to: RRWDLQASQSTE*VLGQPRLQRER Trigger: TCTCTCTCTCTGCAGTCGTGGTTGTCCTAGAACTCACTCTGTAGACTGGCTGGCCTGGAGGTCCCAGCGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125704.8 |
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| 3UTR CCA 72 bp | TCCCTGGTCCTGAGACCTGCTAAGGAGAGCTCACTATaGCCAGGACTTCTGAGAGCTGCTGATGGCTGGACG | + |
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Preference number: 3 (lower is better) Translates to: SLVLRPAKESSL*PGLLRAADGWT Trigger: CGTCCAGCCATCAGCAGCTCTCAGAAGTCCTGGCCATAGTGAGCTCTCCTTAGCAGGTCTCAGGACCAGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125704.8 |
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| 3UTR TCA 72 bp | AATCTACAAAGCCGGTCTCATGCCCATCACACCTTCTaGGCCCACCCAAGCTCCCTCCCCCTGTGCATGATG | + |
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Preference number: 3 (lower is better) Translates to: NLQSRSHAHHTF*AHPSSLPLCMM Trigger: CATCATGCACAGGGGGAGGGAGCTTGGGTGGGCTCAGAAGGTGTGATGGGCATGAGACCGGCTTTGTAGATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000064050.5 ENSMUST00000124615.8 ENSMUST00000125704.8 ENSMUST00000142796.8 ENSMUST00000142821.8 |
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| 3UTR TCA 72 bp | GGTCCAAGCCTGTACCTCACCTCCCAGCACCCTGTCTaGGAAAAATCCCCGACATCACAAGGTCAAAGGCCC | + |
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Preference number: 3 (lower is better) Translates to: GPSLYLTSQHPV*EKSPTSQGQRP Trigger: GGGCCTTTGACCTTGTGATGTCGGGGATTTTTCTCAGACAGGGTGCTGGGAGGTGAGGTACAGGCTTGGACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125704.8 |
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| 3UTR TCA 72 bp | GATGGCTGGACGAACGAACCTGAGCAGCCCCTGGGTTaGGCCCCTGAGCAAGACAGACCTCAGACATTCAAT | + |
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Preference number: 3 (lower is better) Translates to: DGWTNEPEQPLG*APEQDRPQTFN Trigger: ATTGAATGTCTGAGGTCTGTCTTGCTCAGGGGCTCAACCCAGGGGCTGCTCAGGTTCGTTCGTCCAGCCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125704.8 |
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| 3UTR TCA 72 bp | CATGTCTCCTGTCAGGAAATCAGGGCTCCCTGGTCCTaGGACCTGCTAAGGAGAGCTCACTATGGCCAGGAC | + |
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Preference number: 3 (lower is better) Translates to: HVSCQEIRAPWS*DLLRRAHYGQD Trigger: GTCCTGGCCATAGTGAGCTCTCCTTAGCAGGTCTCAGGACCAGGGAGCCCTGATTTCCTGACAGGAGACATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125704.8 |
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| 3UTR GCA 72 bp | TCTCTTTTTCAGCAATGCTGGCCCAGAGAGTCCCTCTaGCTCCTGCAGCGGGAGAAAAATCTACAAAGCCGG | + |
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Preference number: 3 (lower is better) Translates to: SLFQQCWPRESL*LLQREKNLQSR Trigger: CCGGCTTTGTAGATTTTTCTCCCGCTGCAGGAGGCAGAGGGACTCTCTGGGCCAGCATTGCTGAAAAAGAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000064050.5 ENSMUST00000124615.8 ENSMUST00000125704.8 ENSMUST00000142796.8 ENSMUST00000142821.8 |
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| 3UTR-3UTR CAA 90 bp | GAGTTCCAGGCCAGCCAAGGCTACACAGTGAGACTCCTCTGTCTTGGAAAACCCCGCCTGGTAGAAGATTaGTGTTCTGGGAGAATACAA | + |
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Preference number: 3 (lower is better) Translates to: EFQASQGYTVRLLCLGKPRLVED*CSGRIQ Trigger: TTGTATTCTCCCAGAACACAAATCTTCTACCAGGCG...GGGTTTTCCAAGACAGAGGAGTCTCACTGTGTAGCCTTGGCTGGCCTGGAACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000064050.5 ENSMUST00000124615.8 ENSMUST00000125704.8 ENSMUST00000142796.8 ENSMUST00000142821.8 |
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| 3UTR-3UTR CAA 90 bp | AGGACAACCACGACTGCAGAGAGAGAGAGAGAGAGCACCAGCCAAACCCATGTCCGCCTGGTAGAAGATTaGTGTTCTGGGAGAATACAA | + |
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Preference number: 3 (lower is better) Translates to: RTTTTAERERESTSQTHVRLVED*CSGRIQ Trigger: TTGTATTCTCCCAGAACACAAATCTTCTACCAGGCG...GACATGGGTTTGGCTGGTGCTCTCTCTCTCTCTCTCTGCAGTCGTGGTTGTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125704.8 |
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| 3UTR TCA 72 bp | TCCATGGTGAGTTCCAGGCCAGCCAAGGCTACACAGTaGGACTCCTCTGTCTTGGAAAACCCAAAGAAAAGG | + |
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Preference number: 3 (lower is better) Translates to: SMVSSRPAKATQ*DSSVLENPKKR Trigger: CCTTTTCTTTGGGTTTTCCAAGACAGAGGAGTCTCACTGTGTAGCCTTGGCTGGCCTGGAACTCACCATGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000064050.5 ENSMUST00000124615.8 ENSMUST00000125704.8 ENSMUST00000142796.8 ENSMUST00000142821.8 |
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| 3UTR-3UTR CAA 90 bp | AAATCCCCGACATCACAAGGTCAAAGGCCCTATCACCTCTTCTCCAAACCCAGCCTTTCTTATTCCTGCTaGTGCTTTTTAGCGGAAGCC | + |
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Preference number: 3 (lower is better) Translates to: KSPTSQGQRPYHLFSKPSLSYSC*CFLAEA Trigger: GGCTTCCGCTAAAAAGCACAAGCAGGAATAAGAAAG...GCTGGGTTTGGAGAAGAGGTGATAGGGCCTTTGACCTTGTGATGTCGGGGATTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125704.8 |
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| 3UTR GCA 72 bp | CTGGGAGAATACAACATACTAAGCCTTTCTTATTCCTaGTTGTGCTTTTTAGCGGAAGCCCTATGCCCCCTA | + |
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Preference number: 3 (lower is better) Translates to: LGEYNILSLSYS*LCFLAEALCPL Trigger: TAGGGGGCATAGGGCTTCCGCTAAAAAGCACAAGCAGGAATAAGAAAGGCTTAGTATGTTGTATTCTCCCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000064050.5 ENSMUST00000124615.8 ENSMUST00000125704.8 ENSMUST00000142796.8 ENSMUST00000142821.8 |
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| 3UTR-3UTR CAA 90 bp | AAGGACACCATTAAAATGAAGGATTGCTATAAAACTCTGGACAGTTCCCAGCTGCTTTCTTATTCCTGCTaGTGCTTTTTAGCGGAAGCC | + |
|
Preference number: 3 (lower is better) Translates to: KDTIKMKDCYKTLDSSQLLSYSC*CFLAEA Trigger: GGCTTCCGCTAAAAAGCACAAGCAGGAATAAGAAAG...CAGCTGGGAACTGTCCAGAGTTTTATAGCAATCCTTCATTTTAATGGTGTCCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000064050.5 ENSMUST00000124615.8 ENSMUST00000125704.8 ENSMUST00000142796.8 ENSMUST00000142821.8 |
||
| CDS-3UTR TCA 90 bp | TGCCCATCACACCTTCTGAGCCCACCCAAGCTCCCTCCCCCTGTGCATGATGTCCGTGGGTCATCATCCTaGACGATCTCCCCATTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: CPSHLLSPPKLPPPVHDVRGSSS*TISPLA Trigger: GGCCAATGGGGAGATCGTTCAGGATGATGACCCACG...GACATCATGCACAGGGGGAGGGAGCTTGGGTGGGCTCAGAAGGTGTGATGGGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000064050.5 ENSMUST00000124615.8 ENSMUST00000125704.8 ENSMUST00000142796.8 ENSMUST00000142821.8 |
||
| CDS-3UTR CCA 90 bp | TGCCCATCACACCTTCTGAGCCCACCCAAGCTCCCTCCCCCTGTGCATGATGTCCCCAAGGTGCCATTGTaGGAAGCCCATGTTCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: CPSHLLSPPKLPPPVHDVPKVPL*EAHVHQ Trigger: CTGGTGAACATGGGCTTCCCACAATGGCACCTTGGG...GACATCATGCACAGGGGGAGGGAGCTTGGGTGGGCTCAGAAGGTGTGATGGGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000064050.5 ENSMUST00000124615.8 ENSMUST00000125704.8 ENSMUST00000142796.8 ENSMUST00000142821.8 |
||
| CDS-3UTR CCA 90 bp | CCAACACTTGGGAGGAAGACACAGGAGGATCTCTGTGAGCTGGAGGCCGACCTGTCACTGAAAGGAGATTaGGCAGCACCCAGTCGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PTLGRKTQEDLCELEADLSLKGD*AAPSRA Trigger: TGCCCGACTGGGTGCTGCCCAATCTCCTTTCAGTGA...CAGGTCGGCCTCCAGCTCACAGAGATCCTCCTGTGTCTTCCTCCCAAGTGTTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000064050.5 ENSMUST00000124615.8 ENSMUST00000125704.8 ENSMUST00000142796.8 ENSMUST00000142821.8 |
||
| CDS-3UTR GCA 90 bp | AGAAAAATCTACAAAGCCGGTCTCATGCCCATCACACCTTCTGAGCCCACCCAAAGGGCCCCCTGGAGGTaGGCCGTGGCCTCTGTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: RKIYKAGLMPITPSEPTQRAPWR*AVASVE Trigger: TTCAACAGAGGCCACGGCGCACCTCCAGGGGGCCCT...TTGGGTGGGCTCAGAAGGTGTGATGGGCATGAGACCGGCTTTGTAGATTTTTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000064050.5 ENSMUST00000124615.8 ENSMUST00000125704.8 ENSMUST00000142796.8 ENSMUST00000142821.8 |
||
| CDS-3UTR GCA 90 bp | TTTAGCGGAAGCCCTATGCCCCCTAAAAACATTCCAGGAAACCACAGGACTCTCAGGGCCCCCTGGAGGTaGGCCGTGGCCTCTGTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: FSGSPMPPKNIPGNHRTLRAPWR*AVASVE Trigger: TTCAACAGAGGCCACGGCGCACCTCCAGGGGGCCCT...GAGAGTCCTGTGGTTTCCTGGAATGTTTTTAGGGGGCATAGGGCTTCCGCTAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 5 transcripts: ENSMUST00000064050.5 ENSMUST00000124615.8 ENSMUST00000125704.8 ENSMUST00000142796.8 ENSMUST00000142821.8 |
||
| CDS-3UTR CCA 90 bp | TCTACAAAGCCGGTCTCATGCCCATCACACCTTCTGAGCCCACCCAAGCTCCCTTCACTGAAAGGAGATTaGGCAGCACCCAGTCGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: STKPVSCPSHLLSPPKLPSLKGD*AAPSRA Trigger: TGCCCGACTGGGTGCTGCCCAATCTCCTTTCAGTGA...AGGGAGCTTGGGTGGGCTCAGAAGGTGTGATGGGCATGAGACCGGCTTTGTAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000064050.5 ENSMUST00000124615.8 ENSMUST00000125704.8 ENSMUST00000142796.8 ENSMUST00000142821.8 |
||
| CDS-3UTR CCA 90 bp | TCTACAAAGCCGGTCTCATGCCCATCACACCTTCTGAGCCCACCCAAGCTCCCTTACTTCTGTGCTGGGTaGTCGTCCTCACTCGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: STKPVSCPSHLLSPPKLPYFCAG*SSSLVG Trigger: ACCCACGAGTGAGGACGACCACCCAGCACAGAAGTA...AGGGAGCTTGGGTGGGCTCAGAAGGTGTGATGGGCATGAGACCGGCTTTGTAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000064050.5 ENSMUST00000124615.8 ENSMUST00000125704.8 ENSMUST00000142796.8 ENSMUST00000142821.8 |
||
| 3UTR CAA 72 bp | GCTGGGCACAGTATCACACACCTTTGGTCCCAACACTaGGGAGGAAGACACAGGAGGATCTCTGTGAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: AGHSITHLWSQH*GGRHRRISVSW Trigger: CCAGCTCACAGAGATCCTCCTGTGTCTTCCTCCCAAGTGTTGGGACCAAAGGTGTGTGATACTGTGCCCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000064050.5 ENSMUST00000124615.8 ENSMUST00000125704.8 ENSMUST00000142796.8 ENSMUST00000142821.8 |
||
| CDS-3UTR TCA 90 bp | TTTAGCGGAAGCCCTATGCCCCCTAAAAACATTCCAGGAAACCACAGGACTCTCCGTGGGTCATCATCCTaGACGATCTCCCCATTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: FSGSPMPPKNIPGNHRTLRGSSS*TISPLA Trigger: GGCCAATGGGGAGATCGTTCAGGATGATGACCCACG...GAGAGTCCTGTGGTTTCCTGGAATGTTTTTAGGGGGCATAGGGCTTCCGCTAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000064050.5 ENSMUST00000124615.8 ENSMUST00000125704.8 ENSMUST00000142796.8 ENSMUST00000142821.8 |
||
| CDS-3UTR GCA 90 bp | GAATACAACATACTAAGCCTTTCTTATTCCTGCTTGTGCTTTTTAGCGGAAGCCACCCAGTCGGGCACCTaGCTGCTGCTGGCGGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: EYNILSLSYSCLCFLAEATQSGT*LLLAGS Trigger: GGACCCCGCCAGCAGCAGGCAGGTGCCCGACTGGGT...GGCTTCCGCTAAAAAGCACAAGCAGGAATAAGAAAGGCTTAGTATGTTGTATTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000064050.5 ENSMUST00000124615.8 ENSMUST00000125704.8 ENSMUST00000142796.8 ENSMUST00000142821.8 |
||
| CDS-3UTR GCA 90 bp | AGTTCTAGGACAACCACGACTGCAGAGAGAGAGAGAGAGAGCACCAGCCAAACCCCCATGTTCACCAGCTaGCGGTTCAGGTCACTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SSRTTTTAERERESTSQTPMFTS*RFRSLK Trigger: TTTCAGTGACCTGAACCGGCAGCTGGTGAACATGGG...GGTTTGGCTGGTGCTCTCTCTCTCTCTCTCTGCAGTCGTGGTTGTCCTAGAACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125704.8 |
||
| CDS-3UTR GCA 90 bp | CTACACAGTGAGACTCCTCTGTCTTGGAAAACCCAAAGAAAAGGAAAGATCATGAGGGCCCCCTGGAGGTaGGCCGTGGCCTCTGTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LHSETPLSWKTQRKGKIMRAPWR*AVASVE Trigger: TTCAACAGAGGCCACGGCGCACCTCCAGGGGGCCCT...CATGATCTTTCCTTTTCTTTGGGTTTTCCAAGACAGAGGAGTCTCACTGTGTAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000064050.5 ENSMUST00000124615.8 ENSMUST00000125704.8 ENSMUST00000142796.8 ENSMUST00000142821.8 |
||
| CDS-3UTR CCA 90 bp | TTTAGCGGAAGCCCTATGCCCCCTAAAAACATTCCAGGAAACCACAGGACTCTCTCACTGAAAGGAGATTaGGCAGCACCCAGTCGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: FSGSPMPPKNIPGNHRTLSLKGD*AAPSRA Trigger: TGCCCGACTGGGTGCTGCCCAATCTCCTTTCAGTGA...GAGAGTCCTGTGGTTTCCTGGAATGTTTTTAGGGGGCATAGGGCTTCCGCTAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000064050.5 ENSMUST00000124615.8 ENSMUST00000125704.8 ENSMUST00000142796.8 ENSMUST00000142821.8 |
||
| CDS-3UTR CCA 90 bp | TACACTCCATTCTTTCACTCCTTACACACTCCGCCCCCAGTCATCCTAAGGACTCCCAAGGTGCCATTGTaGGAAGCCCATGTTCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: YTPFFHSLHTPPPVILRTPKVPL*EAHVHQ Trigger: CTGGTGAACATGGGCTTCCCACAATGGCACCTTGGG...AGTCCTTAGGATGACTGGGGGCGGAGTGTGTAAGGAGTGAAAGAATGGAGTGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125704.8 |
||
| CDS-3UTR CCA 90 bp | TTTAGCGGAAGCCCTATGCCCCCTAAAAACATTCCAGGAAACCACAGGACTCTCTACTTCTGTGCTGGGTaGTCGTCCTCACTCGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: FSGSPMPPKNIPGNHRTLYFCAG*SSSLVG Trigger: ACCCACGAGTGAGGACGACCACCCAGCACAGAAGTA...GAGAGTCCTGTGGTTTCCTGGAATGTTTTTAGGGGGCATAGGGCTTCCGCTAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000064050.5 ENSMUST00000124615.8 ENSMUST00000125704.8 ENSMUST00000142796.8 ENSMUST00000142821.8 |
||
| CDS-3UTR CCA 90 bp | AGAAAAATCTACAAAGCCGGTCTCATGCCCATCACACCTTCTGAGCCCACCCAATACTTCTGTGCTGGGTaGTCGTCCTCACTCGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: RKIYKAGLMPITPSEPTQYFCAG*SSSLVG Trigger: ACCCACGAGTGAGGACGACCACCCAGCACAGAAGTA...TTGGGTGGGCTCAGAAGGTGTGATGGGCATGAGACCGGCTTTGTAGATTTTTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000064050.5 ENSMUST00000124615.8 ENSMUST00000125704.8 ENSMUST00000142796.8 ENSMUST00000142821.8 |
||
| CDS-3UTR TCA 90 bp | AAGCCTTTCTTATTCCTGCTTGTGCTTTTTAGCGGAAGCCCTATGCCCCCTAAACGTGGGTCATCATCCTaGACGATCTCCCCATTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: KPFLFLLVLFSGSPMPPKRGSSS*TISPLA Trigger: GGCCAATGGGGAGATCGTTCAGGATGATGACCCACG...TTTAGGGGGCATAGGGCTTCCGCTAAAAAGCACAAGCAGGAATAAGAAAGGCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000064050.5 ENSMUST00000124615.8 ENSMUST00000125704.8 ENSMUST00000142796.8 ENSMUST00000142821.8 |
||
| CDS-3UTR GCA 90 bp | AAGGACACCATTAAAATGAAGGATTGCTATAAAACTCTGGACAGTTCCCAGCTGAGGGCCCCCTGGAGGTaGGCCGTGGCCTCTGTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: KDTIKMKDCYKTLDSSQLRAPWR*AVASVE Trigger: TTCAACAGAGGCCACGGCGCACCTCCAGGGGGCCCT...CAGCTGGGAACTGTCCAGAGTTTTATAGCAATCCTTCATTTTAATGGTGTCCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000064050.5 ENSMUST00000124615.8 ENSMUST00000125704.8 ENSMUST00000142796.8 ENSMUST00000142821.8 |
||
| CDS-3UTR GCA 90 bp | TTTAGCGGAAGCCCTATGCCCCCTAAAAACATTCCAGGAAACCACAGGACTCTCCCCATGTTCACCAGCTaGCGGTTCAGGTCACTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: FSGSPMPPKNIPGNHRTLPMFTS*RFRSLK Trigger: TTTCAGTGACCTGAACCGGCAGCTGGTGAACATGGG...GAGAGTCCTGTGGTTTCCTGGAATGTTTTTAGGGGGCATAGGGCTTCCGCTAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000064050.5 ENSMUST00000124615.8 ENSMUST00000125704.8 ENSMUST00000142796.8 ENSMUST00000142821.8 |
||
| CDS-3UTR CCA 90 bp | AGAAAAATCTACAAAGCCGGTCTCATGCCCATCACACCTTCTGAGCCCACCCAAGGTCGTCCTCACTCGTaGGTCATCATCCTGAACGAT | + |
|
Preference number: 4 (lower is better) Translates to: RKIYKAGLMPITPSEPTQGRPHS*VIILND Trigger: ATCGTTCAGGATGATGACCCACGAGTGAGGACGACC...TTGGGTGGGCTCAGAAGGTGTGATGGGCATGAGACCGGCTTTGTAGATTTTTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000064050.5 ENSMUST00000124615.8 ENSMUST00000125704.8 ENSMUST00000142796.8 ENSMUST00000142821.8 |
||
| CDS-3UTR CCA 90 bp | TACACTCCATTCTTTCACTCCTTACACACTCCGCCCCCAGTCATCCTAAGGACTGGTCGTCCTCACTCGTaGGTCATCATCCTGAACGAT | + |
|
Preference number: 4 (lower is better) Translates to: YTPFFHSLHTPPPVILRTGRPHS*VIILND Trigger: ATCGTTCAGGATGATGACCCACGAGTGAGGACGACC...AGTCCTTAGGATGACTGGGGGCGGAGTGTGTAAGGAGTGAAAGAATGGAGTGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125704.8 |
||
| CDS-3UTR CCA 90 bp | TTTAGCGGAAGCCCTATGCCCCCTAAAAACATTCCAGGAAACCACAGGACTCTCGGTCGTCCTCACTCGTaGGTCATCATCCTGAACGAT | + |
|
Preference number: 4 (lower is better) Translates to: FSGSPMPPKNIPGNHRTLGRPHS*VIILND Trigger: ATCGTTCAGGATGATGACCCACGAGTGAGGACGACC...GAGAGTCCTGTGGTTTCCTGGAATGTTTTTAGGGGGCATAGGGCTTCCGCTAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000064050.5 ENSMUST00000124615.8 ENSMUST00000125704.8 ENSMUST00000142796.8 ENSMUST00000142821.8 |
||
| CDS-3UTR CCA 90 bp | AAGCCTTTCTTATTCCTGCTTGTGCTTTTTAGCGGAAGCCCTATGCCCCCTAAACCCAAGGTGCCATTGTaGGAAGCCCATGTTCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: KPFLFLLVLFSGSPMPPKPKVPL*EAHVHQ Trigger: CTGGTGAACATGGGCTTCCCACAATGGCACCTTGGG...TTTAGGGGGCATAGGGCTTCCGCTAAAAAGCACAAGCAGGAATAAGAAAGGCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000064050.5 ENSMUST00000124615.8 ENSMUST00000125704.8 ENSMUST00000142796.8 ENSMUST00000142821.8 |
||
| CDS-3UTR CCA 90 bp | AAGCCTTTCTTATTCCTGCTTGTGCTTTTTAGCGGAAGCCCTATGCCCCCTAAATACTTCTGTGCTGGGTaGTCGTCCTCACTCGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: KPFLFLLVLFSGSPMPPKYFCAG*SSSLVG Trigger: ACCCACGAGTGAGGACGACCACCCAGCACAGAAGTA...TTTAGGGGGCATAGGGCTTCCGCTAAAAAGCACAAGCAGGAATAAGAAAGGCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000064050.5 ENSMUST00000124615.8 ENSMUST00000125704.8 ENSMUST00000142796.8 ENSMUST00000142821.8 |
||
| 3UTR CAA 72 bp | CTGCTCTCAGCTCCGGGTTTGCGCCTGGTAGAAGATTaGTGTTCTGGGAGAATACAACATACTAAGCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LLSAPGLRLVED*CSGRIQHTKPF Trigger: GAAAGGCTTAGTATGTTGTATTCTCCCAGAACACAAATCTTCTACCAGGCGCAAACCCGGAGCTGAGAGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000064050.5 ENSMUST00000124615.8 ENSMUST00000125704.8 ENSMUST00000142796.8 ENSMUST00000142821.8 |
||
| CDS-3UTR TCA 90 bp | GAATACAACATACTAAGCCTTTCTTATTCCTGCTTGTGCTTTTTAGCGGAAGCCCGTGGGTCATCATCCTaGACGATCTCCCCATTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: EYNILSLSYSCLCFLAEARGSSS*TISPLA Trigger: GGCCAATGGGGAGATCGTTCAGGATGATGACCCACG...GGCTTCCGCTAAAAAGCACAAGCAGGAATAAGAAAGGCTTAGTATGTTGTATTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000064050.5 ENSMUST00000124615.8 ENSMUST00000125704.8 ENSMUST00000142796.8 ENSMUST00000142821.8 |
||
| CDS-3UTR CCA 90 bp | CTACACAGTGAGACTCCTCTGTCTTGGAAAACCCAAAGAAAAGGAAAGATCATGTCACTGAAAGGAGATTaGGCAGCACCCAGTCGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LHSETPLSWKTQRKGKIMSLKGD*AAPSRA Trigger: TGCCCGACTGGGTGCTGCCCAATCTCCTTTCAGTGA...CATGATCTTTCCTTTTCTTTGGGTTTTCCAAGACAGAGGAGTCTCACTGTGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000064050.5 ENSMUST00000124615.8 ENSMUST00000125704.8 ENSMUST00000142796.8 ENSMUST00000142821.8 |
||
| CDS-3UTR CCA 90 bp | GAGCAAGACAGACCTCAGACATTCAATACACTCCATTCTTTCACTCCTTACACATACTTCTGTGCTGGGTaGTCGTCCTCACTCGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: EQDRPQTFNTLHSFTPYTYFCAG*SSSLVG Trigger: ACCCACGAGTGAGGACGACCACCCAGCACAGAAGTA...TGTGTAAGGAGTGAAAGAATGGAGTGTATTGAATGTCTGAGGTCTGTCTTGCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125704.8 |
||
| CDS-3UTR GCA 90 bp | AAGGACACCATTAAAATGAAGGATTGCTATAAAACTCTGGACAGTTCCCAGCTGCCCATGTTCACCAGCTaGCGGTTCAGGTCACTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: KDTIKMKDCYKTLDSSQLPMFTS*RFRSLK Trigger: TTTCAGTGACCTGAACCGGCAGCTGGTGAACATGGG...CAGCTGGGAACTGTCCAGAGTTTTATAGCAATCCTTCATTTTAATGGTGTCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000064050.5 ENSMUST00000124615.8 ENSMUST00000125704.8 ENSMUST00000142796.8 ENSMUST00000142821.8 |
||
| CDS-3UTR CCA 90 bp | GAATACAACATACTAAGCCTTTCTTATTCCTGCTTGTGCTTTTTAGCGGAAGCCGGTCGTCCTCACTCGTaGGTCATCATCCTGAACGAT | + |
|
Preference number: 4 (lower is better) Translates to: EYNILSLSYSCLCFLAEAGRPHS*VIILND Trigger: ATCGTTCAGGATGATGACCCACGAGTGAGGACGACC...GGCTTCCGCTAAAAAGCACAAGCAGGAATAAGAAAGGCTTAGTATGTTGTATTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000064050.5 ENSMUST00000124615.8 ENSMUST00000125704.8 ENSMUST00000142796.8 ENSMUST00000142821.8 |
||
| CDS-3UTR CCA 90 bp | GTAGAAGATTTGTGTTCTGGGAGAATACAACATACTAAGCCTTTCTTATTCCTGTCACTGAAAGGAGATTaGGCAGCACCCAGTCGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VEDLCSGRIQHTKPFLFLSLKGD*AAPSRA Trigger: TGCCCGACTGGGTGCTGCCCAATCTCCTTTCAGTGA...CAGGAATAAGAAAGGCTTAGTATGTTGTATTCTCCCAGAACACAAATCTTCTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000064050.5 ENSMUST00000124615.8 ENSMUST00000125704.8 ENSMUST00000142796.8 ENSMUST00000142821.8 |
||
| CDS-3UTR CCA 90 bp | GTAGAAGATTTGTGTTCTGGGAGAATACAACATACTAAGCCTTTCTTATTCCTGCCCAAGGTGCCATTGTaGGAAGCCCATGTTCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: VEDLCSGRIQHTKPFLFLPKVPL*EAHVHQ Trigger: CTGGTGAACATGGGCTTCCCACAATGGCACCTTGGG...CAGGAATAAGAAAGGCTTAGTATGTTGTATTCTCCCAGAACACAAATCTTCTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000064050.5 ENSMUST00000124615.8 ENSMUST00000125704.8 ENSMUST00000142796.8 ENSMUST00000142821.8 |
||
| 3UTR CAA 72 bp | GGAGAATACAACATACTAAGCCTTTCTTATTCCTGCTaGTGCTTTTTAGCGGAAGCCCTATGCCCCCTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: GEYNILSLSYSC*CFLAEALCPLK Trigger: TTTTAGGGGGCATAGGGCTTCCGCTAAAAAGCACAAGCAGGAATAAGAAAGGCTTAGTATGTTGTATTCTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000064050.5 ENSMUST00000124615.8 ENSMUST00000125704.8 ENSMUST00000142796.8 ENSMUST00000142821.8 |
||
| CDS GCA 90 bp | TCACTGAAAGGAGATTGGGCAGCACCCAGTCGGGCACCTGCCTGCTaGTGGCGGGGTCCAGGGCCCCCTGGAGGTGCGCCGTGGCCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SLKGDWAAPSRAPAC*WRGPGPPGGAPWPL Trigger: CAGAGGCCACGGCGCACCTCCAGGGGGCCCTGGACCCCGCCAGCAGCAGGCAGGTGCCCGACTGGGTGCTGCCCAATCTCCTTTCAGTGA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENSMUST00000027719.12 ENSMUST00000064050.5 ENSMUST00000124615.8 ENSMUST00000125704.8 ENSMUST00000141144.2 ENSMUST00000141724.8 ENSMUST00000142796.8 ENSMUST00000142821.8 ENSMUST00000156798.2 |
||
| CDS GCA 90 bp | AGGTCACTGAAAGGAGATTGGGCAGCACCCAGTCGGGCACCTGCCTaGTGCTGGCGGGGTCCAGGGCCCCCTGGAGGTGCGCCGTGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: RSLKGDWAAPSRAPA*CWRGPGPPGGAPWP Trigger: AGGCCACGGCGCACCTCCAGGGGGCCCTGGACCCCGCCAGCAGCAGGCAGGTGCCCGACTGGGTGCTGCCCAATCTCCTTTCAGTGACCT 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENSMUST00000027719.12 ENSMUST00000064050.5 ENSMUST00000124615.8 ENSMUST00000125704.8 ENSMUST00000141144.2 ENSMUST00000141724.8 ENSMUST00000142796.8 ENSMUST00000142821.8 ENSMUST00000156798.2 |
||
| CDS TCA 90 bp | GCCATTGTGGGAAGCCCATGTTCACCAGCTGCCGGTTCAGGTCACTaGAAGGAGATTGGGCAGCACCCAGTCGGGCACCTGCCTGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: AIVGSPCSPAAGSGH*KEIGQHPVGHLPAA Trigger: AGCAGCAGGCAGGTGCCCGACTGGGTGCTGCCCAATCTCCTTTCAGTGACCTGAACCGGCAGCTGGTGAACATGGGCTTCCCACAATGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000027719.12 ENSMUST00000064050.5 ENSMUST00000124615.8 ENSMUST00000125704.8 ENSMUST00000141144.2 ENSMUST00000141724.8 ENSMUST00000142796.8 ENSMUST00000142821.8 ENSMUST00000156798.2 |
||
| CDS GCA 90 bp | ACGTGGTTCCCAAGGTGCCATTGTGGGAAGCCCATGTTCACCAGCTaGCGGTTCAGGTCACTGAAAGGAGATTGGGCAGCACCCAGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: TWFPRCHCGKPMFTS*RFRSLKGDWAAPSR Trigger: CCGACTGGGTGCTGCCCAATCTCCTTTCAGTGACCTGAACCGGCAGCTGGTGAACATGGGCTTCCCACAATGGCACCTTGGGAACCACGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000027719.12 ENSMUST00000064050.5 ENSMUST00000124615.8 ENSMUST00000125704.8 ENSMUST00000141144.2 ENSMUST00000141724.8 ENSMUST00000142796.8 ENSMUST00000142821.8 ENSMUST00000156798.2 |
||
| CDS GCA 90 bp | AGCAGGAGGATGGAGGTCACAGGTTCCACCACGTGGTTCCCAAGGTaGCATTGTGGGAAGCCCATGTTCACCAGCTGCCGGTTCAGGTCA | + |
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Preference number: 5 (lower is better) Translates to: SRRMEVTGSTTWFPR*HCGKPMFTSCRFRS Trigger: TGACCTGAACCGGCAGCTGGTGAACATGGGCTTCCCACAATGGCACCTTGGGAACCACGTGGTGGAACCTGTGACCTCCATCCTCCTGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000027719.12 ENSMUST00000064050.5 ENSMUST00000124615.8 ENSMUST00000125704.8 ENSMUST00000141144.2 ENSMUST00000141724.8 ENSMUST00000142796.8 ENSMUST00000142821.8 ENSMUST00000156798.2 |
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| CDS CCA 90 bp | ACGATCTCCCCATTGGCCAAGATCCTCACCATTCTCCCTGGACGCTaGGAATTTCTGCTGCGCTGTACCTCACTGGCTCCTCCATCCAGC | + |
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Preference number: 5 (lower is better) Translates to: TISPLAKILTILPGR*EFLLRCTSLAPPSS Trigger: GCTGGATGGAGGAGCCAGTGAGGTACAGCGCAGCAGAAATTCCCAGCGTCCAGGGAGAATGGTGAGGATCTTGGCCAATGGGGAGATCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141724.8 |
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| CDS-3UTR CAA 90 bp | CCAACACTTGGGAGGAAGACACAGGAGGATCTCTGTGAGCTGGAGGCCGACCTGGTTCCCAAGGTGCCATaGTGGGAAGCCCATGTTCAC | + |
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Preference number: 5 (lower is better) Translates to: PTLGRKTQEDLCELEADLVPKVP*WEAHVH Trigger: GTGAACATGGGCTTCCCACAATGGCACCTTGGGAAC...CAGGTCGGCCTCCAGCTCACAGAGATCCTCCTGTGTCTTCCTCCCAAGTGTTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000064050.5 ENSMUST00000124615.8 ENSMUST00000125704.8 ENSMUST00000142796.8 ENSMUST00000142821.8 |
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| CDS CCA 90 bp | CTGCTGAGAGCTGCTACTTCTGTGCTGGGTGGTCGTCCTCACTCGTaGGTCATCATCCTGAACGATCTCCCCATTGGCCAAGATCCTCAC | + |
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Preference number: 5 (lower is better) Translates to: LLRAATSVLGGRPHS*VIILNDLPIGQDPH Trigger: GTGAGGATCTTGGCCAATGGGGAGATCGTTCAGGATGATGACCCACGAGTGAGGACGACCACCCAGCACAGAAGTAGCAGCTCTCAGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000064050.5 ENSMUST00000124615.8 ENSMUST00000125704.8 ENSMUST00000141144.2 ENSMUST00000141724.8 ENSMUST00000142796.8 ENSMUST00000142821.8 ENSMUST00000156798.2 |
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| CDS CCA 90 bp | ATCCTGAACGATCTCCCCATTGGCCAAGATCCTCACCATTCTCCCTaGACGCTGGGAATTTCTGCTGCGCTGTACCTCACTGGCTCCTCC | + |
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Preference number: 5 (lower is better) Translates to: ILNDLPIGQDPHHSP*TLGISAALYLTGSS Trigger: GGAGGAGCCAGTGAGGTACAGCGCAGCAGAAATTCCCAGCGTCCAGGGAGAATGGTGAGGATCTTGGCCAATGGGGAGATCGTTCAGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141724.8 |
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| CDS-3UTR CAA 90 bp | TCTACAAAGCCGGTCTCATGCCCATCACACCTTCTGAGCCCACCCAAGCTCCCTGTTCCCAAGGTGCCATaGTGGGAAGCCCATGTTCAC | + |
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Preference number: 5 (lower is better) Translates to: STKPVSCPSHLLSPPKLPVPKVP*WEAHVH Trigger: GTGAACATGGGCTTCCCACAATGGCACCTTGGGAAC...AGGGAGCTTGGGTGGGCTCAGAAGGTGTGATGGGCATGAGACCGGCTTTGTAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000064050.5 ENSMUST00000124615.8 ENSMUST00000125704.8 ENSMUST00000142796.8 ENSMUST00000142821.8 |
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| CDS TCA 90 bp | CTACTTCTGTGCTGGGTGGTCGTCCTCACTCGTGGGTCATCATCCTaGACGATCTCCCCATTGGCCAAGATCCTCACCATTCTCCCTGGA | + |
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Preference number: 5 (lower is better) Translates to: LLLCWVVVLTRGSSS*TISPLAKILTILPG Trigger: TCCAGGGAGAATGGTGAGGATCTTGGCCAATGGGGAGATCGTTCAGGATGATGACCCACGAGTGAGGACGACCACCCAGCACAGAAGTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141724.8 |
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| CDS CCA 90 bp | TGGTCGTCCTCACTCGTGGGTCATCATCCTGAACGATCTCCCCATTaGCCAAGATCCTCACCATTCTCCCTGGACGCTGGGAATTTCTGC | + |
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Preference number: 5 (lower is better) Translates to: WSSSLVGHHPERSPH*PRSSPFSLDAGNFC Trigger: GCAGAAATTCCCAGCGTCCAGGGAGAATGGTGAGGATCTTGGCCAATGGGGAGATCGTTCAGGATGATGACCCACGAGTGAGGACGACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141724.8 |
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| CDS-3UTR CAA 90 bp | CTACACAGTGAGACTCCTCTGTCTTGGAAAACCCAAAGAAAAGGAAAGATCATGGTTCCCAAGGTGCCATaGTGGGAAGCCCATGTTCAC | + |
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Preference number: 5 (lower is better) Translates to: LHSETPLSWKTQRKGKIMVPKVP*WEAHVH Trigger: GTGAACATGGGCTTCCCACAATGGCACCTTGGGAAC...CATGATCTTTCCTTTTCTTTGGGTTTTCCAAGACAGAGGAGTCTCACTGTGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000064050.5 ENSMUST00000124615.8 ENSMUST00000125704.8 ENSMUST00000142796.8 ENSMUST00000142821.8 |
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| CDS-3UTR CAA 90 bp | AAGGACACCATTAAAATGAAGGATTGCTATAAAACTCTGGACAGTTCCCAGCTGGTTCCCAAGGTGCCATaGTGGGAAGCCCATGTTCAC | + |
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Preference number: 5 (lower is better) Translates to: KDTIKMKDCYKTLDSSQLVPKVP*WEAHVH Trigger: GTGAACATGGGCTTCCCACAATGGCACCTTGGGAAC...CAGCTGGGAACTGTCCAGAGTTTTATAGCAATCCTTCATTTTAATGGTGTCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000064050.5 ENSMUST00000124615.8 ENSMUST00000125704.8 ENSMUST00000142796.8 ENSMUST00000142821.8 |
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| CDS-3UTR CAA 90 bp | GAATACAACATACTAAGCCTTTCTTATTCCTGCTTGTGCTTTTTAGCGGAAGCCGTTCCCAAGGTGCCATaGTGGGAAGCCCATGTTCAC | + |
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Preference number: 5 (lower is better) Translates to: EYNILSLSYSCLCFLAEAVPKVP*WEAHVH Trigger: GTGAACATGGGCTTCCCACAATGGCACCTTGGGAAC...GGCTTCCGCTAAAAAGCACAAGCAGGAATAAGAAAGGCTTAGTATGTTGTATTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000064050.5 ENSMUST00000124615.8 ENSMUST00000125704.8 ENSMUST00000142796.8 ENSMUST00000142821.8 |
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| CDS CAA 72 bp | GGTCCAGGGCCCCCTGGAGGTGCGCCGTGGCCTCTGTaGAAAAAGCCCTCACTGGCTCCTCCATCCAGCTCT | + |
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Preference number: 6 (lower is better) Translates to: GPGPPGGAPWPL*KKPSLAPPSSS Trigger: AGAGCTGGATGGAGGAGCCAGTGAGGGCTTTTTCAACAGAGGCCACGGCGCACCTCCAGGGGGCCCTGGACC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000027719.12 |
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| CDS TCA 72 bp | GTCCAGGGCCCCCTGGAGGTGCGCCGTGGCCTCTGTTaGAAAAGCCCTCACTGGCTCCTCCATCCAGCTCTT | + |
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Preference number: 6 (lower is better) Translates to: VQGPLEVRRGLC*KSPHWLLHPAL Trigger: AAGAGCTGGATGGAGGAGCCAGTGAGGGCTTTTTCAACAGAGGCCACGGCGCACCTCCAGGGGGCCCTGGAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027719.12 |
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| CDS TCA 72 bp | GTCCAGGGCCCCCTGGAGGTGCGCCGTGGCCTCTGTTaGAAAAGCCCTGCTGAGAGCTGCTACTTCTGTGCT | + |
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Preference number: 6 (lower is better) Translates to: VQGPLEVRRGLC*KSPAESCYFCA Trigger: AGCACAGAAGTAGCAGCTCTCAGCAGGGCTTTTTCAACAGAGGCCACGGCGCACCTCCAGGGGGCCCTGGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000064050.5 ENSMUST00000124615.8 ENSMUST00000125704.8 ENSMUST00000141144.2 ENSMUST00000141724.8 ENSMUST00000142796.8 ENSMUST00000142821.8 ENSMUST00000156798.2 |
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| CDS CAA 72 bp | GTTCACCAGCTGCCGGTTCAGGTCACTGAAAGGAGATaGGGCAGCACCCAGTCGGGCACCTGCCTGCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: VHQLPVQVTERR*GSTQSGTCLLL Trigger: CAGCAGCAGGCAGGTGCCCGACTGGGTGCTGCCCAATCTCCTTTCAGTGACCTGAACCGGCAGCTGGTGAAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000027719.12 ENSMUST00000064050.5 ENSMUST00000124615.8 ENSMUST00000125704.8 ENSMUST00000141144.2 ENSMUST00000141724.8 ENSMUST00000142796.8 ENSMUST00000142821.8 ENSMUST00000156798.2 |
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| CDS TCA 72 bp | GGAAGCCCATGTTCACCAGCTGCCGGTTCAGGTCACTaGAAGGAGATTGGGCAGCACCCAGTCGGGCACCTG | + |
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Preference number: 6 (lower is better) Translates to: GSPCSPAAGSGH*KEIGQHPVGHL Trigger: CAGGTGCCCGACTGGGTGCTGCCCAATCTCCTTTCAGTGACCTGAACCGGCAGCTGGTGAACATGGGCTTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000027719.12 ENSMUST00000064050.5 ENSMUST00000124615.8 ENSMUST00000125704.8 ENSMUST00000141144.2 ENSMUST00000141724.8 ENSMUST00000142796.8 ENSMUST00000142821.8 ENSMUST00000156798.2 |
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| CDS GCA 72 bp | ATGGAGGTCACAGGTTCCACCACGTGGTTCCCAAGGTaGCATTGTGGGAAGCCCATGTTCACCAGCTGCCGG | + |
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Preference number: 6 (lower is better) Translates to: MEVTGSTTWFPR*HCGKPMFTSCR Trigger: CCGGCAGCTGGTGAACATGGGCTTCCCACAATGGCACCTTGGGAACCACGTGGTGGAACCTGTGACCTCCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000027719.12 ENSMUST00000064050.5 ENSMUST00000124615.8 ENSMUST00000125704.8 ENSMUST00000141144.2 ENSMUST00000141724.8 ENSMUST00000142796.8 ENSMUST00000142821.8 ENSMUST00000156798.2 |
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| CDS CAA 72 bp | GGTCACAGGTTCCACCACGTGGTTCCCAAGGTGCCATaGTGGGAAGCCCATGTTCACCAGCTGCCGGTTCAG | + |
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Preference number: 6 (lower is better) Translates to: GHRFHHVVPKVP*WEAHVHQLPVQ Trigger: CTGAACCGGCAGCTGGTGAACATGGGCTTCCCACAATGGCACCTTGGGAACCACGTGGTGGAACCTGTGACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000027719.12 ENSMUST00000064050.5 ENSMUST00000124615.8 ENSMUST00000125704.8 ENSMUST00000141144.2 ENSMUST00000141724.8 ENSMUST00000142796.8 ENSMUST00000142821.8 ENSMUST00000156798.2 |
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| CDS CAA 90 bp | GAGGATGGAGGTCACAGGTTCCACCACGTGGTTCCCAAGGTGCCATaGTGGGAAGCCCATGTTCACCAGCTGCCGGTTCAGGTCACTGAA | + |
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Preference number: 6 (lower is better) Translates to: EDGGHRFHHVVPKVP*WEAHVHQLPVQVTE Trigger: TTCAGTGACCTGAACCGGCAGCTGGTGAACATGGGCTTCCCACAATGGCACCTTGGGAACCACGTGGTGGAACCTGTGACCTCCATCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000027719.12 ENSMUST00000064050.5 ENSMUST00000124615.8 ENSMUST00000125704.8 ENSMUST00000141144.2 ENSMUST00000141724.8 ENSMUST00000142796.8 ENSMUST00000142821.8 ENSMUST00000156798.2 |
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| CDS GCA 72 bp | CCAAGGTGCCATTGTGGGAAGCCCATGTTCACCAGCTaGCGGTTCAGGTCACTGAAAGGAGATTGGGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: PRCHCGKPMFTS*RFRSLKGDWAA Trigger: TGCTGCCCAATCTCCTTTCAGTGACCTGAACCGGCAGCTGGTGAACATGGGCTTCCCACAATGGCACCTTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000027719.12 ENSMUST00000064050.5 ENSMUST00000124615.8 ENSMUST00000125704.8 ENSMUST00000141144.2 ENSMUST00000141724.8 ENSMUST00000142796.8 ENSMUST00000142821.8 ENSMUST00000156798.2 |
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| CDS CCA 72 bp | AAGAGCAGGAGGATGGAGGTCACAGGTTCCACCACGTaGTTCCCAAGGTGCCATTGTGGGAAGCCCATGTTC | + |
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Preference number: 6 (lower is better) Translates to: KSRRMEVTGSTT*FPRCHCGKPMF Trigger: GAACATGGGCTTCCCACAATGGCACCTTGGGAACCACGTGGTGGAACCTGTGACCTCCATCCTCCTGCTCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000027719.12 ENSMUST00000064050.5 ENSMUST00000124615.8 ENSMUST00000125704.8 ENSMUST00000141144.2 ENSMUST00000141724.8 ENSMUST00000142796.8 ENSMUST00000142821.8 ENSMUST00000156798.2 |
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| CDS CCA 72 bp | GCTGCTACTTCTGTGCTGGGTGGTCGTCCTCACTCGTaGGTCATCATCCTGAACGATCTCCCCATTGGCCAA | + |
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Preference number: 6 (lower is better) Translates to: AATSVLGGRPHS*VIILNDLPIGQ Trigger: TTGGCCAATGGGGAGATCGTTCAGGATGATGACCCACGAGTGAGGACGACCACCCAGCACAGAAGTAGCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000064050.5 ENSMUST00000124615.8 ENSMUST00000125704.8 ENSMUST00000141144.2 ENSMUST00000141724.8 ENSMUST00000142796.8 ENSMUST00000142821.8 ENSMUST00000156798.2 |
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| CDS CCA 72 bp | CCATTGGCCAAGATCCTCACCATTCTCCCTGGACGCTaGGAATTTCTGCTGCGCTGTACCTCACTGGCTCCT | + |
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Preference number: 6 (lower is better) Translates to: PLAKILTILPGR*EFLLRCTSLAP Trigger: AGGAGCCAGTGAGGTACAGCGCAGCAGAAATTCCCAGCGTCCAGGGAGAATGGTGAGGATCTTGGCCAATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000141724.8 ENSMUST00000150057.2 |
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| CDS TCA 72 bp | TGCTGGGTGGTCGTCCTCACTCGTGGGTCATCATCCTaGACGATCTCCCCATTGGCCAAGATCCTCACCATT | + |
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Preference number: 6 (lower is better) Translates to: CWVVVLTRGSSS*TISPLAKILTI Trigger: AATGGTGAGGATCTTGGCCAATGGGGAGATCGTTCAGGATGATGACCCACGAGTGAGGACGACCACCCAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141724.8 |
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| CDS CCA 72 bp | AAAAGCCCTGCTGAGAGCTGCTACTTCTGTGCTGGGTaGTCGTCCTCACTCGTGGGTCATCATCCTGAACGA | + |
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Preference number: 6 (lower is better) Translates to: KSPAESCYFCAG*SSSLVGHHPER Trigger: TCGTTCAGGATGATGACCCACGAGTGAGGACGACCACCCAGCACAGAAGTAGCAGCTCTCAGCAGGGCTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000064050.5 ENSMUST00000124615.8 ENSMUST00000125704.8 ENSMUST00000141144.2 ENSMUST00000141724.8 ENSMUST00000142796.8 ENSMUST00000142821.8 ENSMUST00000156798.2 |
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