RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAM234A (Mus musculus)

Ensembl gene IDs: ENSMUSG00000024187

Ensembl transcript IDs: ENSMUST00000114988.8, ENSMUST00000118487.8, ENSMUST00000141240.3, ENSMUST00000151293.2, ENSMUST00000234175.2, ENSMUST00000234262.2, ENSMUST00000234554.2, ENSMUST00000234687.2

Found 404 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GTGGTGGCTTTCCTGGGAGAGGGTAAGGAGGCAGGAAGTGATAAATaGGCCTCCTGTGGGCTGCCTTGCCCAAGCCAGCCCAGGGAGCCT +
Preference number: 1 (lower is better)
Translates to: VVAFLGEGKEAGSDK*ASCGLPCPSQPREP
Trigger: AGGCTCCCTGGGCTGGCTTGGGCAAGGCAGCCCACAGGAGGCTCATTTATCACTTCCTGCCTCCTTACCCTCTCCCAGGAAAGCCACCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR GCA 90 bp CAGGTTCCAGCTACAGCCCTGAGTTTCGTGACCCCTGAGGGACAGTaGCGAAATGGGGAAAGCCAGGCTGGCCTGAGAGGGACTAGGGAG +
Preference number: 1 (lower is better)
Translates to: QVPATALSFVTPEGQ*RNGESQAGLRGTRE
Trigger: CTCCCTAGTCCCTCTCAGGCCAGCCTGGCTTTCCCCATTTCGGCACTGTCCCTCAGGGGTCACGAAACTCAGGGCTGTAGCTGGAACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR GCA 90 bp TCTCCCTTCTGTCAGGGCCACGTGTATGCCAGGTTACCTTTACTCTaGAGGGCTGAGGGCCCAACCCCAGCCGTCGTGTTGACACCGCAG +
Preference number: 1 (lower is better)
Translates to: SPFCQGHVYARLPLL*RAEGPTPAVVLTPQ
Trigger: CTGCGGTGTCAACACGACGGCTGGGGTTGGGCCCTCAGCCCTGCAGAGTAAAGGTAACCTGGCATACACGTGGCCCTGACAGAAGGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114988.8
3UTR TCA 90 bp GGGAAAGAGACGTGCCCGCTGTGCCAGGGTGCAGGGACAGTGTACTaGGGCGAAGGACTGACTCAGCGTACAGTCTGGAAATCCCTCGCA +
Preference number: 1 (lower is better)
Translates to: GKETCPLCQGAGTVY*GEGLTQRTVWKSLA
Trigger: TGCGAGGGATTTCCAGACTGTACGCTGAGTCAGTCCTTCGCCTCAGTACACTGTCCCTGCACCCTGGCACAGCGGGCACGTCTCTTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR GCA 90 bp GTCTGGAAATCCCTCGCACCCGGAGGCTCTGGTCAGACTCAGGGTTaGTCGCTTTCCAGGAGACATGCTCCCTTCTGCTGTGGGGAAGCA +
Preference number: 1 (lower is better)
Translates to: VWKSLAPGGSGQTQG*SLSRRHAPFCCGEA
Trigger: TGCTTCCCCACAGCAGAAGGGAGCATGTCTCCTGGAAAGCGAGCAACCCTGAGTCTGACCAGAGCCTCCGGGTGCGAGGGATTTCCAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR CCA 90 bp GACTCAGGGTTGCTCGCTTTCCAGGAGACATGCTCCCTTCTGCTGTaGGGAAGCAGCTTCCAAGCCTCAGGTTCCAGCTACAGCCCTGAG +
Preference number: 1 (lower is better)
Translates to: DSGLLAFQETCSLLL*GSSFQASGSSYSPE
Trigger: CTCAGGGCTGTAGCTGGAACCTGAGGCTTGGAAGCTGCTTCCCCACAGCAGAAGGGAGCATGTCTCCTGGAAAGCGAGCAACCCTGAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR CCA 90 bp CAGGCTGGCCTGAGAGGGACTAGGGAGCAGCACAGCACACAGTGGTaGCTTTCCTGGGAGAGGGTAAGGAGGCAGGAAGTGATAAATGAG +
Preference number: 1 (lower is better)
Translates to: QAGLRGTREQHSTQW*LSWERVRRQEVINE
Trigger: CTCATTTATCACTTCCTGCCTCCTTACCCTCTCCCAGGAAAGCCACCACTGTGTGCTGTGCTGCTCCCTAGTCCCTCTCAGGCCAGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR TCA 90 bp GGTGGCTGGGGTCATGGGACTGCTTTGGCTACAGAGCTATGGATGTaGTCTGGGCAAAGCTGCTCTGTTGCCCTTGGGCTTCAGGAACAA +
Preference number: 1 (lower is better)
Translates to: GGWGHGTALATELWM*SGQSCSVALGLQEQ
Trigger: TTGTTCCTGAAGCCCAAGGGCAACAGAGCAGCTTTGCCCAGATCACATCCATAGCTCTGTAGCCAAAGCAGTCCCATGACCCCAGCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR TCA 90 bp GCTCTGTTGCCCTTGGGCTTCAGGAACAACAAACAAGGCACAAGGTaGGACCGCCATCAGATAAGCACCAGAGTAGGGAAAGAGACGTGC +
Preference number: 1 (lower is better)
Translates to: ALLPLGFRNNKQGTR*DRHQISTRVGKETC
Trigger: GCACGTCTCTTTCCCTACTCTGGTGCTTATCTGATGGCGGTCTCACCTTGTGCCTTGTTTGTTGTTCCTGAAGCCCAAGGGCAACAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR CCA 90 bp CTGGGGTCATGGGACTGCTTTGGCTACAGAGCTATGGATGTGATCTaGGCAAAGCTGCTCTGTTGCCCTTGGGCTTCAGGAACAACAAAC +
Preference number: 1 (lower is better)
Translates to: LGSWDCFGYRAMDVI*AKLLCCPWASGTTN
Trigger: GTTTGTTGTTCCTGAAGCCCAAGGGCAACAGAGCAGCTTTGCCCAGATCACATCCATAGCTCTGTAGCCAAAGCAGTCCCATGACCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR GCA 90 bp TTTGGCTACAGAGCTATGGATGTGATCTGGGCAAAGCTGCTCTGTTaGCCTTGGGCTTCAGGAACAACAAACAAGGCACAAGGTGAGACC +
Preference number: 1 (lower is better)
Translates to: FGYRAMDVIWAKLLC*PWASGTTNKAQGET
Trigger: GGTCTCACCTTGTGCCTTGTTTGTTGTTCCTGAAGCCCAAGGGCAACAGAGCAGCTTTGCCCAGATCACATCCATAGCTCTGTAGCCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR GCA 90 bp AATCGTTTATTGTGTTGGTTTCCATGGTGGCTGGGGTCATGGGACTaGTTTGGCTACAGAGCTATGGATGTGATCTGGGCAAAGCTGCTC +
Preference number: 1 (lower is better)
Translates to: NRLLCWFPWWLGSWD*FGYRAMDVIWAKLL
Trigger: GAGCAGCTTTGCCCAGATCACATCCATAGCTCTGTAGCCAAAGCAGTCCCATGACCCCAGCCACCATGGAAACCAACACAATAAACGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR CCA 90 bp TTTATTGTGTTGGTTTCCATGGTGGCTGGGGTCATGGGACTGCTTTaGCTACAGAGCTATGGATGTGATCTGGGCAAAGCTGCTCTGTTG +
Preference number: 1 (lower is better)
Translates to: FIVLVSMVAGVMGLL*LQSYGCDLGKAALL
Trigger: CAACAGAGCAGCTTTGCCCAGATCACATCCATAGCTCTGTAGCCAAAGCAGTCCCATGACCCCAGCCACCATGGAAACCAACACAATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR CCA 90 bp GCTTTCCCCATCAGTGCAAATCGTTTATTGTGTTGGTTTCCATGGTaGCTGGGGTCATGGGACTGCTTTGGCTACAGAGCTATGGATGTG +
Preference number: 1 (lower is better)
Translates to: AFPISANRLLCWFPW*LGSWDCFGYRAMDV
Trigger: CACATCCATAGCTCTGTAGCCAAAGCAGTCCCATGACCCCAGCCACCATGGAAACCAACACAATAAACGATTTGCACTGATGGGGAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR CCA 90 bp TTTGTTGTGAGCAGAAAGACATCCAGACAGACTGCAGGCTCACGCTaGACTACGGGGGCTTTCCCCATCAGTGCAAATCGTTTATTGTGT +
Preference number: 1 (lower is better)
Translates to: FVVSRKTSRQTAGSR*TTGAFPISANRLLC
Trigger: ACACAATAAACGATTTGCACTGATGGGGAAAGCCCCCGTAGTCCAGCGTGAGCCTGCAGTCTGTCTGGATGTCTTTCTGCTCACAACAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000114988.8
3UTR CCA 90 bp AGTGCAAATCGTTTATTGTGTTGGTTTCCATGGTGGCTGGGGTCATaGGACTGCTTTGGCTACAGAGCTATGGATGTGATCTGGGCAAAG +
Preference number: 1 (lower is better)
Translates to: SANRLLCWFPWWLGS*DCFGYRAMDVIWAK
Trigger: CTTTGCCCAGATCACATCCATAGCTCTGTAGCCAAAGCAGTCCCATGACCCCAGCCACCATGGAAACCAACACAATAAACGATTTGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR-3UTR CCA 90 bp GTGGGTAGACAGGATGCTGCCACCCGTCCAGTGTCCCCTGCGGCAGGTGTGCCCCCACTAGGTGGGCTGTaGGGAGCAAGGTGTGGGGCC +
Preference number: 2 (lower is better)
Translates to: VGRQDAATRPVSPAAGVPPLGGL*GARCGA
Trigger: GGCCCCACACCTTGCTCCCCACAGCCCACCTAGTGG...GGGCACACCTGCCGCAGGGGACACTGGACGGGTGGCAGCATCCTGTCTACCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000114988.8
3UTR-3UTR TCA 90 bp CCCTCGCACCCGGAGGCTCTGGTCAGACTCAGGGTTGCTCGCTTTCCAGGAGACGCAGTGAGGTCAGCATaGAGGCCGAGAGCAGGCCAG +
Preference number: 2 (lower is better)
Translates to: PSHPEALVRLRVARFPGDAVRSA*RPRAGQ
Trigger: CTGGCCTGCTCTCGGCCTTCATGCTGACCTCACTGC...GTCTCCTGGAAAGCGAGCAACCCTGAGTCTGACCAGAGCCTCCGGGTGCGAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR-3UTR GCA 90 bp CCCGGAGGCTCTGGTCAGACTCAGGGTTGCTCGCTTTCCAGGAGACATGCTCCCGAGCCTCCTGTGGGCTaGCTTGCCCAAGCCAGCCCA +
Preference number: 2 (lower is better)
Translates to: PGGSGQTQGCSLSRRHAPEPPVG*LAQASP
Trigger: TGGGCTGGCTTGGGCAAGGCAGCCCACAGGAGGCTC...GGGAGCATGTCTCCTGGAAAGCGAGCAACCCTGAGTCTGACCAGAGCCTCCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR-3UTR TCA 90 bp CCCTCGCACCCGGAGGCTCTGGTCAGACTCAGGGTTGCTCGCTTTCCAGGAGACCATCAGGGCGAGCAGTaGGGTCAGCATGAAGGCCGA +
Preference number: 2 (lower is better)
Translates to: PSHPEALVRLRVARFPGDHQGEQ*GQHEGR
Trigger: TCGGCCTTCATGCTGACCTCACTGCTCGCCCTGATG...GTCTCCTGGAAAGCGAGCAACCCTGAGTCTGACCAGAGCCTCCGGGTGCGAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR-3UTR GCA 90 bp GCGTACAGTCTGGAAATCCCTCGCACCCGGAGGCTCTGGTCAGACTCAGGGTTGGAGCCTCCTGTGGGCTaGCTTGCCCAAGCCAGCCCA +
Preference number: 2 (lower is better)
Translates to: AYSLEIPRTRRLWSDSGLEPPVG*LAQASP
Trigger: TGGGCTGGCTTGGGCAAGGCAGCCCACAGGAGGCTC...CAACCCTGAGTCTGACCAGAGCCTCCGGGTGCGAGGGATTTCCAGACTGTACGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR-3UTR CCA 90 bp CCCTCGCACCCGGAGGCTCTGGTCAGACTCAGGGTTGCTCGCTTTCCAGGAGACAGGGAGGACATGGTATaGGCAGGAGGCTGGAAGGTG +
Preference number: 2 (lower is better)
Translates to: PSHPEALVRLRVARFPGDREDMV*AGGWKV
Trigger: CACCTTCCAGCCTCCTGCCCATACCATGTCCTCCCT...GTCTCCTGGAAAGCGAGCAACCCTGAGTCTGACCAGAGCCTCCGGGTGCGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR-3UTR TCA 90 bp CGCTTTCCAGGAGACATGCTCCCTTCTGCTGTGGGGAAGCAGCTTCCAAGCCTCGCAGTGAGGTCAGCATaGAGGCCGAGAGCAGGCCAG +
Preference number: 2 (lower is better)
Translates to: RFPGDMLPSAVGKQLPSLAVRSA*RPRAGQ
Trigger: CTGGCCTGCTCTCGGCCTTCATGCTGACCTCACTGC...GAGGCTTGGAAGCTGCTTCCCCACAGCAGAAGGGAGCATGTCTCCTGGAAAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR-3UTR TCA 90 bp GCGTACAGTCTGGAAATCCCTCGCACCCGGAGGCTCTGGTCAGACTCAGGGTTGCATCAGGGCGAGCAGTaGGGTCAGCATGAAGGCCGA +
Preference number: 2 (lower is better)
Translates to: AYSLEIPRTRRLWSDSGLHQGEQ*GQHEGR
Trigger: TCGGCCTTCATGCTGACCTCACTGCTCGCCCTGATG...CAACCCTGAGTCTGACCAGAGCCTCCGGGTGCGAGGGATTTCCAGACTGTACGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR CAA 90 bp AGTCTGGAAATCCCTCGCACCCGGAGGCTCTGGTCAGACTCAGGGTaGCTCGCTTTCCAGGAGACATGCTCCCTTCTGCTGTGGGGAAGC +
Preference number: 2 (lower is better)
Translates to: SLEIPRTRRLWSDSG*LAFQETCSLLLWGS
Trigger: GCTTCCCCACAGCAGAAGGGAGCATGTCTCCTGGAAAGCGAGCAACCCTGAGTCTGACCAGAGCCTCCGGGTGCGAGGGATTTCCAGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR-3UTR TCA 90 bp GTGCTGATGAGTGACCCAGCCCCCATCTCAGGCTTCAGTGGTGTTAGTCTGCACGCAGTGAGGTCAGCATaGAGGCCGAGAGCAGGCCAG +
Preference number: 2 (lower is better)
Translates to: VLMSDPAPISGFSGVSLHAVRSA*RPRAGQ
Trigger: CTGGCCTGCTCTCGGCCTTCATGCTGACCTCACTGC...GTGCAGACTAACACCACTGAAGCCTGAGATGGGGGCTGGGTCACTCATCAGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000114988.8
3UTR-3UTR TCA 90 bp AGGCTCTGGTCAGACTCAGGGTTGCTCGCTTTCCAGGAGACATGCTCCCTTCTGGCAGTGAGGTCAGCATaGAGGCCGAGAGCAGGCCAG +
Preference number: 2 (lower is better)
Translates to: RLWSDSGLLAFQETCSLLAVRSA*RPRAGQ
Trigger: CTGGCCTGCTCTCGGCCTTCATGCTGACCTCACTGC...CAGAAGGGAGCATGTCTCCTGGAAAGCGAGCAACCCTGAGTCTGACCAGAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR-3UTR TCA 90 bp TCCCTCGCACCCGGAGGCTCTGGTCAGACTCAGGGTTGCTCGCTTTCCAGGAGAGCAGGAAGTGATAAATaGGCCTCCTGTGGGCTGCCT +
Preference number: 2 (lower is better)
Translates to: SLAPGGSGQTQGCSLSRRAGSDK*ASCGLP
Trigger: AGGCAGCCCACAGGAGGCTCATTTATCACTTCCTGC...TCTCCTGGAAAGCGAGCAACCCTGAGTCTGACCAGAGCCTCCGGGTGCGAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR-3UTR GCA 90 bp GAGCAGCACAGCACACAGTGGTGGCTTTCCTGGGAGAGGGTAAGGAGGCAGGAACAGGAGGCTGGAAGGTaGCCCCCACTCTCAACATCC +
Preference number: 2 (lower is better)
Translates to: EQHSTQWWLSWERVRRQEQEAGR*PPLSTS
Trigger: GGATGTTGAGAGTGGGGGGCACCTTCCAGCCTCCTG...TTCCTGCCTCCTTACCCTCTCCCAGGAAAGCCACCACTGTGTGCTGTGCTGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR-3UTR CCA 90 bp CCTCAGGTTCCAGCTACAGCCCTGAGTTTCGTGACCCCTGAGGGACAGTGCCGAAGGGAGGACATGGTATaGGCAGGAGGCTGGAAGGTG +
Preference number: 2 (lower is better)
Translates to: PQVPATALSFVTPEGQCRREDMV*AGGWKV
Trigger: CACCTTCCAGCCTCCTGCCCATACCATGTCCTCCCT...TCGGCACTGTCCCTCAGGGGTCACGAAACTCAGGGCTGTAGCTGGAACCTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR-3UTR CCA 90 bp CCTCAGGTTCCAGCTACAGCCCTGAGTTTCGTGACCCCTGAGGGACAGTGCCGACAGTGGTGGCTTTCCTaGGAGAGGGTAAGGAGGCAG +
Preference number: 2 (lower is better)
Translates to: PQVPATALSFVTPEGQCRQWWLS*ERVRRQ
Trigger: CTGCCTCCTTACCCTCTCCCAGGAAAGCCACCACTG...TCGGCACTGTCCCTCAGGGGTCACGAAACTCAGGGCTGTAGCTGGAACCTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR-3UTR CCA 90 bp TCCCTCGCACCCGGAGGCTCTGGTCAGACTCAGGGTTGCTCGCTTTCCAGGAGACACAGCACACAGTGGTaGCTTTCCTGGGAGAGGGTA +
Preference number: 2 (lower is better)
Translates to: SLAPGGSGQTQGCSLSRRHSTQW*LSWERV
Trigger: TACCCTCTCCCAGGAAAGCCACCACTGTGTGCTGTG...TCTCCTGGAAAGCGAGCAACCCTGAGTCTGACCAGAGCCTCCGGGTGCGAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR-3UTR GCA 90 bp AGGAGACATGCTCCCTTCTGCTGTGGGGAAGCAGCTTCCAAGCCTCAGGTTCCACAGGAGGCTGGAAGGTaGCCCCCACTCTCAACATCC +
Preference number: 2 (lower is better)
Translates to: RRHAPFCCGEAASKPQVPQEAGR*PPLSTS
Trigger: GGATGTTGAGAGTGGGGGGCACCTTCCAGCCTCCTG...TGGAACCTGAGGCTTGGAAGCTGCTTCCCCACAGCAGAAGGGAGCATGTCTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR-3UTR GCA 90 bp GTCTGGAAATCCCTCGCACCCGGAGGCTCTGGTCAGACTCAGGGTTGCTCGCTTAGACATGCTCCCTTCTaGTGTGGGGAAGCAGCTTCC +
Preference number: 2 (lower is better)
Translates to: VWKSLAPGGSGQTQGCSLRHAPF*CGEAAS
Trigger: GGAAGCTGCTTCCCCACAGCAGAAGGGAGCATGTCT...AAGCGAGCAACCCTGAGTCTGACCAGAGCCTCCGGGTGCGAGGGATTTCCAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR-3UTR GCA 90 bp GGCGAAGGACTGACTCAGCGTACAGTCTGGAAATCCCTCGCACCCGGAGGCTCTGCTTTCCAGGAGACATaGTCCCTTCTGCTGTGGGGA +
Preference number: 2 (lower is better)
Translates to: GEGLTQRTVWKSLAPGGSAFQET*SLLLWG
Trigger: TCCCCACAGCAGAAGGGAGCATGTCTCCTGGAAAGC...AGAGCCTCCGGGTGCGAGGGATTTCCAGACTGTACGCTGAGTCAGTCCTTCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR-3UTR GCA 90 bp TTTCCATGGTGGCTGGGGTCATGGGACTGCTTTGGCTACAGAGCTATGGATGTGGAGACGTGCCCGCTGTaGCAGGGTGCAGGGACAGTG +
Preference number: 2 (lower is better)
Translates to: FPWWLGSWDCFGYRAMDVETCPL*QGAGTV
Trigger: CACTGTCCCTGCACCCTGGCACAGCGGGCACGTCTC...CACATCCATAGCTCTGTAGCCAAAGCAGTCCCATGACCCCAGCCACCATGGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR-3UTR CCA 90 bp GAGCAGCACAGCACACAGTGGTGGCTTTCCTGGGAGAGGGTAAGGAGGCAGGAAAGGGAGGACATGGTATaGGCAGGAGGCTGGAAGGTG +
Preference number: 2 (lower is better)
Translates to: EQHSTQWWLSWERVRRQEREDMV*AGGWKV
Trigger: CACCTTCCAGCCTCCTGCCCATACCATGTCCTCCCT...TTCCTGCCTCCTTACCCTCTCCCAGGAAAGCCACCACTGTGTGCTGTGCTGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR-3UTR CCA 90 bp GCGTACAGTCTGGAAATCCCTCGCACCCGGAGGCTCTGGTCAGACTCAGGGTTGCACAGCACACAGTGGTaGCTTTCCTGGGAGAGGGTA +
Preference number: 2 (lower is better)
Translates to: AYSLEIPRTRRLWSDSGLHSTQW*LSWERV
Trigger: TACCCTCTCCCAGGAAAGCCACCACTGTGTGCTGTG...CAACCCTGAGTCTGACCAGAGCCTCCGGGTGCGAGGGATTTCCAGACTGTACGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR-3UTR CCA 90 bp GGCGAAGGACTGACTCAGCGTACAGTCTGGAAATCCCTCGCACCCGGAGGCTCTCACAGCACACAGTGGTaGCTTTCCTGGGAGAGGGTA +
Preference number: 2 (lower is better)
Translates to: GEGLTQRTVWKSLAPGGSHSTQW*LSWERV
Trigger: TACCCTCTCCCAGGAAAGCCACCACTGTGTGCTGTG...AGAGCCTCCGGGTGCGAGGGATTTCCAGACTGTACGCTGAGTCAGTCCTTCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR-3UTR CCA 90 bp GTGGGTAGACAGGATGCTGCCACCCGTCCAGTGTCCCCTGCGGCAGGTGTGCCCATCTCATCCTGGCATTaGAGAGAGAGACTCCTGAAA +
Preference number: 2 (lower is better)
Translates to: VGRQDAATRPVSPAAGVPISSWH*RERLLK
Trigger: TTTCAGGAGTCTCTCTCTCCAATGCCAGGATGAGAT...GGGCACACCTGCCGCAGGGGACACTGGACGGGTGGCAGCATCCTGTCTACCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114988.8
3UTR-3UTR TCA 90 bp GGTTTCCATGGTGGCTGGGGTCATGGGACTGCTTTGGCTACAGAGCTATGGATGCATCAGGGCGAGCAGTaGGGTCAGCATGAAGGCCGA +
Preference number: 2 (lower is better)
Translates to: GFHGGWGHGTALATELWMHQGEQ*GQHEGR
Trigger: TCGGCCTTCATGCTGACCTCACTGCTCGCCCTGATG...CATCCATAGCTCTGTAGCCAAAGCAGTCCCATGACCCCAGCCACCATGGAAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR-3UTR GCA 90 bp GGTTTCCATGGTGGCTGGGGTCATGGGACTGCTTTGGCTACAGAGCTATGGATGCAGGAGGCTGGAAGGTaGCCCCCACTCTCAACATCC +
Preference number: 2 (lower is better)
Translates to: GFHGGWGHGTALATELWMQEAGR*PPLSTS
Trigger: GGATGTTGAGAGTGGGGGGCACCTTCCAGCCTCCTG...CATCCATAGCTCTGTAGCCAAAGCAGTCCCATGACCCCAGCCACCATGGAAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR-3UTR GCA 90 bp AAGCCCTCCAGGCTCTCTTGTGCTGTGGCAGCCAATGCTTACCTGACTTTCATTGAGACGTGCCCGCTGTaGCAGGGTGCAGGGACAGTG +
Preference number: 2 (lower is better)
Translates to: KPSRLSCAVAANAYLTFIETCPL*QGAGTV
Trigger: CACTGTCCCTGCACCCTGGCACAGCGGGCACGTCTC...AATGAAAGTCAGGTAAGCATTGGCTGCCACAGCACAAGAGAGCCTGGAGGGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114988.8
3UTR-3UTR CCA 90 bp AGGAGACATGCTCCCTTCTGCTGTGGGGAAGCAGCTTCCAAGCCTCAGGTTCCAAGGGAGGACATGGTATaGGCAGGAGGCTGGAAGGTG +
Preference number: 2 (lower is better)
Translates to: RRHAPFCCGEAASKPQVPREDMV*AGGWKV
Trigger: CACCTTCCAGCCTCCTGCCCATACCATGTCCTCCCT...TGGAACCTGAGGCTTGGAAGCTGCTTCCCCACAGCAGAAGGGAGCATGTCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR-3UTR CCA 90 bp GTGCTGATGAGTGACCCAGCCCCCATCTCAGGCTTCAGTGGTGTTAGTCTGCACCAGTGGTGGCTTTCCTaGGAGAGGGTAAGGAGGCAG +
Preference number: 2 (lower is better)
Translates to: VLMSDPAPISGFSGVSLHQWWLS*ERVRRQ
Trigger: CTGCCTCCTTACCCTCTCCCAGGAAAGCCACCACTG...GTGCAGACTAACACCACTGAAGCCTGAGATGGGGGCTGGGTCACTCATCAGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000114988.8
3UTR-3UTR TCA 90 bp GTTTCCATGGTGGCTGGGGTCATGGGACTGCTTTGGCTACAGAGCTATGGATGTCATCAGGGCGAGCAGTaGGGTCAGCATGAAGGCCGA +
Preference number: 2 (lower is better)
Translates to: VSMVAGVMGLLWLQSYGCHQGEQ*GQHEGR
Trigger: TCGGCCTTCATGCTGACCTCACTGCTCGCCCTGATG...ACATCCATAGCTCTGTAGCCAAAGCAGTCCCATGACCCCAGCCACCATGGAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR-3UTR TCA 90 bp AGGCTCTGGTCAGACTCAGGGTTGCTCGCTTTCCAGGAGACATGCTCCCTTCTGGCAGGAAGTGATAAATaGGCCTCCTGTGGGCTGCCT +
Preference number: 2 (lower is better)
Translates to: RLWSDSGLLAFQETCSLLAGSDK*ASCGLP
Trigger: AGGCAGCCCACAGGAGGCTCATTTATCACTTCCTGC...CAGAAGGGAGCATGTCTCCTGGAAAGCGAGCAACCCTGAGTCTGACCAGAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR-3UTR GCA 90 bp GTTTCCATGGTGGCTGGGGTCATGGGACTGCTTTGGCTACAGAGCTATGGATGTCAGGAGGCTGGAAGGTaGCCCCCACTCTCAACATCC +
Preference number: 2 (lower is better)
Translates to: VSMVAGVMGLLWLQSYGCQEAGR*PPLSTS
Trigger: GGATGTTGAGAGTGGGGGGCACCTTCCAGCCTCCTG...ACATCCATAGCTCTGTAGCCAAAGCAGTCCCATGACCCCAGCCACCATGGAAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR-3UTR GCA 90 bp CTTCAGGAACAACAAACAAGGCACAAGGTGAGACCGCCATCAGATAAGCACCAGGAGCCTCCTGTGGGCTaGCTTGCCCAAGCCAGCCCA +
Preference number: 2 (lower is better)
Translates to: LQEQQTRHKVRPPSDKHQEPPVG*LAQASP
Trigger: TGGGCTGGCTTGGGCAAGGCAGCCCACAGGAGGCTC...CTGGTGCTTATCTGATGGCGGTCTCACCTTGTGCCTTGTTTGTTGTTCCTGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR-3UTR CCA 90 bp GGTTTCCATGGTGGCTGGGGTCATGGGACTGCTTTGGCTACAGAGCTATGGATGCAGTGGTGGCTTTCCTaGGAGAGGGTAAGGAGGCAG +
Preference number: 2 (lower is better)
Translates to: GFHGGWGHGTALATELWMQWWLS*ERVRRQ
Trigger: CTGCCTCCTTACCCTCTCCCAGGAAAGCCACCACTG...CATCCATAGCTCTGTAGCCAAAGCAGTCCCATGACCCCAGCCACCATGGAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR-3UTR CCA 90 bp GTTGACACCGCAGGCACACCTGTGCACACTCTGGGCTTCTGTACATGTGCAGTTTGCTCCCTTCTGCTGTaGGGAAGCAGCTTCCAAGCC +
Preference number: 2 (lower is better)
Translates to: VDTAGTPVHTLGFCTCAVCSLLL*GSSFQA
Trigger: GGCTTGGAAGCTGCTTCCCCACAGCAGAAGGGAGCA...AACTGCACATGTACAGAAGCCCAGAGTGTGCACAGGTGTGCCTGCGGTGTCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114988.8
3UTR-3UTR CCA 90 bp GTGCTGATGAGTGACCCAGCCCCCATCTCAGGCTTCAGTGGTGTTAGTCTGCACCCCCGCATCTCATCCTaGCATTGGAGAGAGAGACTC +
Preference number: 2 (lower is better)
Translates to: VLMSDPAPISGFSGVSLHPRISS*HWRERL
Trigger: GAGTCTCTCTCTCCAATGCCAGGATGAGATGCGGGG...GTGCAGACTAACACCACTGAAGCCTGAGATGGGGGCTGGGTCACTCATCAGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000114988.8
3UTR-3UTR TCA 90 bp CAGTGCAAATCGTTTATTGTGTTGGTTTCCATGGTGGCTGGGGTCATGGGACTGGCAGTGAGGTCAGCATaGAGGCCGAGAGCAGGCCAG +
Preference number: 2 (lower is better)
Translates to: QCKSFIVLVSMVAGVMGLAVRSA*RPRAGQ
Trigger: CTGGCCTGCTCTCGGCCTTCATGCTGACCTCACTGC...CAGTCCCATGACCCCAGCCACCATGGAAACCAACACAATAAACGATTTGCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR-3UTR GCA 90 bp ATCAGTGCAAATCGTTTATTGTGTTGGTTTCCATGGTGGCTGGGGTCATGGGACGAGCCTCCTGTGGGCTaGCTTGCCCAAGCCAGCCCA +
Preference number: 2 (lower is better)
Translates to: ISANRLLCWFPWWLGSWDEPPVG*LAQASP
Trigger: TGGGCTGGCTTGGGCAAGGCAGCCCACAGGAGGCTC...GTCCCATGACCCCAGCCACCATGGAAACCAACACAATAAACGATTTGCACTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR-3UTR GCA 90 bp CCCATCAGTGCAAATCGTTTATTGTGTTGGTTTCCATGGTGGCTGGGGTCATGGCCCGCTGTGCCAGGGTaGAGGGACAGTGTACTGAGG +
Preference number: 2 (lower is better)
Translates to: PISANRLLCWFPWWLGSWPAVPG*RDSVLR
Trigger: CCTCAGTACACTGTCCCTGCACCCTGGCACAGCGGG...CCATGACCCCAGCCACCATGGAAACCAACACAATAAACGATTTGCACTGATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR-3UTR GCA 90 bp CAAATCGTTTATTGTGTTGGTTTCCATGGTGGCTGGGGTCATGGGACTGCTTTGGAGACGTGCCCGCTGTaGCAGGGTGCAGGGACAGTG +
Preference number: 2 (lower is better)
Translates to: QIVYCVGFHGGWGHGTALETCPL*QGAGTV
Trigger: CACTGTCCCTGCACCCTGGCACAGCGGGCACGTCTC...CAAAGCAGTCCCATGACCCCAGCCACCATGGAAACCAACACAATAAACGATTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR-3UTR CCA 90 bp TGGTTTCCATGGTGGCTGGGGTCATGGGACTGCTTTGGCTACAGAGCTATGGATCAGTGGTGGCTTTCCTaGGAGAGGGTAAGGAGGCAG +
Preference number: 2 (lower is better)
Translates to: WFPWWLGSWDCFGYRAMDQWWLS*ERVRRQ
Trigger: CTGCCTCCTTACCCTCTCCCAGGAAAGCCACCACTG...ATCCATAGCTCTGTAGCCAAAGCAGTCCCATGACCCCAGCCACCATGGAAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR-3UTR CCA 90 bp TGGTTTCCATGGTGGCTGGGGTCATGGGACTGCTTTGGCTACAGAGCTATGGATTGCTCCCTTCTGCTGTaGGGAAGCAGCTTCCAAGCC +
Preference number: 2 (lower is better)
Translates to: WFPWWLGSWDCFGYRAMDCSLLL*GSSFQA
Trigger: GGCTTGGAAGCTGCTTCCCCACAGCAGAAGGGAGCA...ATCCATAGCTCTGTAGCCAAAGCAGTCCCATGACCCCAGCCACCATGGAAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR-3UTR TCA 90 bp AGACTCCTGAAATCTGAAGATAACCCTCTCCGTCTCCCTTCTGTCAGGGCCACGGCAGGAAGTGATAAATaGGCCTCCTGTGGGCTGCCT +
Preference number: 2 (lower is better)
Translates to: RLLKSEDNPLRLPSVRATAGSDK*ASCGLP
Trigger: AGGCAGCCCACAGGAGGCTCATTTATCACTTCCTGC...CGTGGCCCTGACAGAAGGGAGACGGAGAGGGTTATCTTCAGATTTCAGGAGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114988.8
3UTR-3UTR GCA 90 bp TTTCCATGGTGGCTGGGGTCATGGGACTGCTTTGGCTACAGAGCTATGGATGTGAGACATGCTCCCTTCTaGTGTGGGGAAGCAGCTTCC +
Preference number: 2 (lower is better)
Translates to: FPWWLGSWDCFGYRAMDVRHAPF*CGEAAS
Trigger: GGAAGCTGCTTCCCCACAGCAGAAGGGAGCATGTCT...CACATCCATAGCTCTGTAGCCAAAGCAGTCCCATGACCCCAGCCACCATGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR-3UTR GCA 90 bp CAAATCGTTTATTGTGTTGGTTTCCATGGTGGCTGGGGTCATGGGACTGCTTTGCCCGCTGTGCCAGGGTaGAGGGACAGTGTACTGAGG +
Preference number: 2 (lower is better)
Translates to: QIVYCVGFHGGWGHGTALPAVPG*RDSVLR
Trigger: CCTCAGTACACTGTCCCTGCACCCTGGCACAGCGGG...CAAAGCAGTCCCATGACCCCAGCCACCATGGAAACCAACACAATAAACGATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR-3UTR TCA 90 bp CAAATCGTTTATTGTGTTGGTTTCCATGGTGGCTGGGGTCATGGGACTGCTTTGCATCAGGGCGAGCAGTaGGGTCAGCATGAAGGCCGA +
Preference number: 2 (lower is better)
Translates to: QIVYCVGFHGGWGHGTALHQGEQ*GQHEGR
Trigger: TCGGCCTTCATGCTGACCTCACTGCTCGCCCTGATG...CAAAGCAGTCCCATGACCCCAGCCACCATGGAAACCAACACAATAAACGATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR-3UTR GCA 90 bp CAAATCGTTTATTGTGTTGGTTTCCATGGTGGCTGGGGTCATGGGACTGCTTTGCAGGAGGCTGGAAGGTaGCCCCCACTCTCAACATCC +
Preference number: 2 (lower is better)
Translates to: QIVYCVGFHGGWGHGTALQEAGR*PPLSTS
Trigger: GGATGTTGAGAGTGGGGGGCACCTTCCAGCCTCCTG...CAAAGCAGTCCCATGACCCCAGCCACCATGGAAACCAACACAATAAACGATTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR-3UTR GCA 90 bp GTTTCCATGGTGGCTGGGGTCATGGGACTGCTTTGGCTACAGAGCTATGGATGTGCAAAGCTGCTCTGTTaGCCTTGGGCTTCAGGAACA +
Preference number: 2 (lower is better)
Translates to: VSMVAGVMGLLWLQSYGCAKLLC*PWASGT
Trigger: TGTTCCTGAAGCCCAAGGGCAACAGAGCAGCTTTGC...ACATCCATAGCTCTGTAGCCAAAGCAGTCCCATGACCCCAGCCACCATGGAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR-3UTR GCA 90 bp GCCACGTGTATGCCAGGTTACCTTTACTCTGCAGGGCTGAGGGCCCAACCCCAGGGCTTTCCCCATCAGTaGAAATCGTTTATTGTGTTG +
Preference number: 2 (lower is better)
Translates to: ATCMPGYLYSAGLRAQPQGFPHQ*KSFIVL
Trigger: CAACACAATAAACGATTTGCACTGATGGGGAAAGCC...CTGGGGTTGGGCCCTCAGCCCTGCAGAGTAAAGGTAACCTGGCATACACGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114988.8
3UTR-3UTR CCA 90 bp CTTCAGGAACAACAAACAAGGCACAAGGTGAGACCGCCATCAGATAAGCACCAGTGCTCCCTTCTGCTGTaGGGAAGCAGCTTCCAAGCC +
Preference number: 2 (lower is better)
Translates to: LQEQQTRHKVRPPSDKHQCSLLL*GSSFQA
Trigger: GGCTTGGAAGCTGCTTCCCCACAGCAGAAGGGAGCA...CTGGTGCTTATCTGATGGCGGTCTCACCTTGTGCCTTGTTTGTTGTTCCTGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR-3UTR CCA 90 bp GTCCACTTTGTGCTGATGAGTGACCCAGCCCCCATCTCAGGCTTCAGTGGTGTTCTGCTCTGTTGCCCTTaGGCTTCAGGAACAACAAAC +
Preference number: 2 (lower is better)
Translates to: VHFVLMSDPAPISGFSGVLLCCP*ASGTTN
Trigger: GTTTGTTGTTCCTGAAGCCCAAGGGCAACAGAGCAG...AACACCACTGAAGCCTGAGATGGGGGCTGGGTCACTCATCAGCACAAAGTGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000114988.8
3UTR-3UTR TCA 90 bp CCCATCAGTGCAAATCGTTTATTGTGTTGGTTTCCATGGTGGCTGGGGTCATGGGCAGGAAGTGATAAATaGGCCTCCTGTGGGCTGCCT +
Preference number: 2 (lower is better)
Translates to: PISANRLLCWFPWWLGSWAGSDK*ASCGLP
Trigger: AGGCAGCCCACAGGAGGCTCATTTATCACTTCCTGC...CCATGACCCCAGCCACCATGGAAACCAACACAATAAACGATTTGCACTGATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR-3UTR GCA 90 bp CTTCAGGAACAACAAACAAGGCACAAGGTGAGACCGCCATCAGATAAGCACCAGAGACATGCTCCCTTCTaGTGTGGGGAAGCAGCTTCC +
Preference number: 2 (lower is better)
Translates to: LQEQQTRHKVRPPSDKHQRHAPF*CGEAAS
Trigger: GGAAGCTGCTTCCCCACAGCAGAAGGGAGCATGTCT...CTGGTGCTTATCTGATGGCGGTCTCACCTTGTGCCTTGTTTGTTGTTCCTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR-3UTR CCA 90 bp CAAATCGTTTATTGTGTTGGTTTCCATGGTGGCTGGGGTCATGGGACTGCTTTGAGGGAGGACATGGTATaGGCAGGAGGCTGGAAGGTG +
Preference number: 2 (lower is better)
Translates to: QIVYCVGFHGGWGHGTALREDMV*AGGWKV
Trigger: CACCTTCCAGCCTCCTGCCCATACCATGTCCTCCCT...CAAAGCAGTCCCATGACCCCAGCCACCATGGAAACCAACACAATAAACGATTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR-3UTR CCA 90 bp CCCATCAGTGCAAATCGTTTATTGTGTTGGTTTCCATGGTGGCTGGGGTCATGGCACAGCACACAGTGGTaGCTTTCCTGGGAGAGGGTA +
Preference number: 2 (lower is better)
Translates to: PISANRLLCWFPWWLGSWHSTQW*LSWERV
Trigger: TACCCTCTCCCAGGAAAGCCACCACTGTGTGCTGTG...CCATGACCCCAGCCACCATGGAAACCAACACAATAAACGATTTGCACTGATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR-3UTR CCA 90 bp ATCAGTGCAAATCGTTTATTGTGTTGGTTTCCATGGTGGCTGGGGTCATGGGACTGCTCCCTTCTGCTGTaGGGAAGCAGCTTCCAAGCC +
Preference number: 2 (lower is better)
Translates to: ISANRLLCWFPWWLGSWDCSLLL*GSSFQA
Trigger: GGCTTGGAAGCTGCTTCCCCACAGCAGAAGGGAGCA...GTCCCATGACCCCAGCCACCATGGAAACCAACACAATAAACGATTTGCACTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR-3UTR TCA 90 bp CAAATCGTTTATTGTGTTGGTTTCCATGGTGGCTGGGGTCATGGGACTGCTTTGGCAGGAAGTGATAAATaGGCCTCCTGTGGGCTGCCT +
Preference number: 2 (lower is better)
Translates to: QIVYCVGFHGGWGHGTALAGSDK*ASCGLP
Trigger: AGGCAGCCCACAGGAGGCTCATTTATCACTTCCTGC...CAAAGCAGTCCCATGACCCCAGCCACCATGGAAACCAACACAATAAACGATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR-3UTR GCA 90 bp ATCAGTGCAAATCGTTTATTGTGTTGGTTTCCATGGTGGCTGGGGTCATGGGACGCTTTCCAGGAGACATaGTCCCTTCTGCTGTGGGGA +
Preference number: 2 (lower is better)
Translates to: ISANRLLCWFPWWLGSWDAFQET*SLLLWG
Trigger: TCCCCACAGCAGAAGGGAGCATGTCTCCTGGAAAGC...GTCCCATGACCCCAGCCACCATGGAAACCAACACAATAAACGATTTGCACTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR-3UTR CCA 90 bp AAGCCCTCCAGGCTCTCTTGTGCTGTGGCAGCCAATGCTTACCTGACTTTCATTGCTATGGATGTGATCTaGGCAAAGCTGCTCTGTTGC +
Preference number: 2 (lower is better)
Translates to: KPSRLSCAVAANAYLTFIAMDVI*AKLLCC
Trigger: GCAACAGAGCAGCTTTGCCCAGATCACATCCATAGC...AATGAAAGTCAGGTAAGCATTGGCTGCCACAGCACAAGAGAGCCTGGAGGGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114988.8
3UTR TCA 72 bp TCTGCAGGGCTGAGGGCCCAACCCCAGCCGTCGTGTTaGCACCGCAGGCACACCTGTGCACACTCTGGGCTT +
Preference number: 3 (lower is better)
Translates to: SAGLRAQPQPSC*HRRHTCAHSGL
Trigger: AAGCCCAGAGTGTGCACAGGTGTGCCTGCGGTGTCAACACGACGGCTGGGGTTGGGCCCTCAGCCCTGCAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114988.8
3UTR-3UTR CAA 90 bp CCCGGAGGCTCTGGTCAGACTCAGGGTTGCTCGCTTTCCAGGAGACATGCTCCCCCCAGGGAGCCTTACTaGACCAGATCAGTGGGCCAC +
Preference number: 3 (lower is better)
Translates to: PGGSGQTQGCSLSRRHAPPREPY*TRSVGH
Trigger: GTGGCCCACTGATCTGGTCAAGTAAGGCTCCCTGGG...GGGAGCATGTCTCCTGGAAAGCGAGCAACCCTGAGTCTGACCAGAGCCTCCGGG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR GCA 72 bp GCTACAGCCCTGAGTTTCGTGACCCCTGAGGGACAGTaGCGAAATGGGGAAAGCCAGGCTGGCCTGAGAGGG +
Preference number: 3 (lower is better)
Translates to: ATALSFVTPEGQ*RNGESQAGLRG
Trigger: CCCTCTCAGGCCAGCCTGGCTTTCCCCATTTCGGCACTGTCCCTCAGGGGTCACGAAACTCAGGGCTGTAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR-3UTR CAA 90 bp AGACAGGATGCTGCCACCCGTCCAGTGTCCCCTGCGGCAGGTGTGCCCATCCATCACGCAGTGAGACCTTaGAGGGAGGACATGGTATGG +
Preference number: 3 (lower is better)
Translates to: RQDAATRPVSPAAGVPIHHAVRP*REDMVW
Trigger: CCATACCATGTCCTCCCTCAAAGGTCTCACTGCGTG...ATGGATGGGCACACCTGCCGCAGGGGACACTGGACGGGTGGCAGCATCCTGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114988.8
3UTR-3UTR CAA 90 bp GCGTACAGTCTGGAAATCCCTCGCACCCGGAGGCTCTGGTCAGACTCAGGGTTGCCCAGGGAGCCTTACTaGACCAGATCAGTGGGCCAC +
Preference number: 3 (lower is better)
Translates to: AYSLEIPRTRRLWSDSGLPREPY*TRSVGH
Trigger: GTGGCCCACTGATCTGGTCAAGTAAGGCTCCCTGGG...CAACCCTGAGTCTGACCAGAGCCTCCGGGTGCGAGGGATTTCCAGACTGTACGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR-3UTR CAA 90 bp CCTCAGGTTCCAGCTACAGCCCTGAGTTTCGTGACCCCTGAGGGACAGTGCCGACCCAGGGAGCCTTACTaGACCAGATCAGTGGGCCAC +
Preference number: 3 (lower is better)
Translates to: PQVPATALSFVTPEGQCRPREPY*TRSVGH
Trigger: GTGGCCCACTGATCTGGTCAAGTAAGGCTCCCTGGG...TCGGCACTGTCCCTCAGGGGTCACGAAACTCAGGGCTGTAGCTGGAACCTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR TCA 72 bp AGGGACAGTGCCGAAATGGGGAAAGCCAGGCTGGCCTaGGAGGGACTAGGGAGCAGCACAGCACACAGTGGT +
Preference number: 3 (lower is better)
Translates to: RDSAEMGKARLA*EGLGSSTAHSG
Trigger: ACCACTGTGTGCTGTGCTGCTCCCTAGTCCCTCTCAGGCCAGCCTGGCTTTCCCCATTTCGGCACTGTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR GCA 72 bp TGTCAGGGCCACGTGTATGCCAGGTTACCTTTACTCTaGAGGGCTGAGGGCCCAACCCCAGCCGTCGTGTTG +
Preference number: 3 (lower is better)
Translates to: CQGHVYARLPLL*RAEGPTPAVVL
Trigger: CAACACGACGGCTGGGGTTGGGCCCTCAGCCCTGCAGAGTAAAGGTAACCTGGCATACACGTGGCCCTGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114988.8
3UTR CCA 72 bp AGCAAGGTGTGGGGCCCTGAGAATGGTGGGTGCCCTTaGACCCCGCATCTCATCCTGGCATTGGAGAGAGAG +
Preference number: 3 (lower is better)
Translates to: SKVWGPENGGCP*TPHLILALERE
Trigger: CTCTCTCTCCAATGCCAGGATGAGATGCGGGGTCCAAGGGCACCCACCATTCTCAGGGCCCCACACCTTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114988.8
3UTR TCA 72 bp ATAGCTCCAGAGGGCCCGAATCATCAGGGCGAGCAGTaGGGTCAGCATGAAGGCCGAGAGCAGGCCAGCTTT +
Preference number: 3 (lower is better)
Translates to: IAPEGPNHQGEQ*GQHEGREQASF
Trigger: AAAGCTGGCCTGCTCTCGGCCTTCATGCTGACCTCACTGCTCGCCCTGATGATTCGGGCCCTCTGGAGCTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR TCA 72 bp TTCCTGGGAGAGGGTAAGGAGGCAGGAAGTGATAAATaGGCCTCCTGTGGGCTGCCTTGCCCAAGCCAGCCC +
Preference number: 3 (lower is better)
Translates to: FLGEGKEAGSDK*ASCGLPCPSQP
Trigger: GGGCTGGCTTGGGCAAGGCAGCCCACAGGAGGCTCATTTATCACTTCCTGCCTCCTTACCCTCTCCCAGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR GCA 72 bp CAGAGTAGGGAAAGAGACGTGCCCGCTGTGCCAGGGTaGAGGGACAGTGTACTGAGGCGAAGGACTGACTCA +
Preference number: 3 (lower is better)
Translates to: QSRERDVPAVPG*RDSVLRRRTDS
Trigger: TGAGTCAGTCCTTCGCCTCAGTACACTGTCCCTGCACCCTGGCACAGCGGGCACGTCTCTTTCCCTACTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR CCA 72 bp CTGAGAGGGACTAGGGAGCAGCACAGCACACAGTGGTaGCTTTCCTGGGAGAGGGTAAGGAGGCAGGAAGTG +
Preference number: 3 (lower is better)
Translates to: LRGTREQHSTQW*LSWERVRRQEV
Trigger: CACTTCCTGCCTCCTTACCCTCTCCCAGGAAAGCCACCACTGTGTGCTGTGCTGCTCCCTAGTCCCTCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR CCA 72 bp GCGTACAGTCTGGAAATCCCTCGCACCCGGAGGCTCTaGTCAGACTCAGGGTTGCTCGCTTTCCAGGAGACA +
Preference number: 3 (lower is better)
Translates to: AYSLEIPRTRRL*SDSGLLAFQET
Trigger: TGTCTCCTGGAAAGCGAGCAACCCTGAGTCTGACCAGAGCCTCCGGGTGCGAGGGATTTCCAGACTGTACGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR-3UTR CAA 90 bp GTCTGGAAATCCCTCGCACCCGGAGGCTCTGGTCAGACTCAGGGTTGCTCGCTTCACGCAGTGAGACCTTaGAGGGAGGACATGGTATGG +
Preference number: 3 (lower is better)
Translates to: VWKSLAPGGSGQTQGCSLHAVRP*REDMVW
Trigger: CCATACCATGTCCTCCCTCAAAGGTCTCACTGCGTG...AAGCGAGCAACCCTGAGTCTGACCAGAGCCTCCGGGTGCGAGGGATTTCCAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR-3UTR CAA 90 bp AGGCTCTGGTCAGACTCAGGGTTGCTCGCTTTCCAGGAGACATGCTCCCTTCTGCCCAGGGAGCCTTACTaGACCAGATCAGTGGGCCAC +
Preference number: 3 (lower is better)
Translates to: RLWSDSGLLAFQETCSLLPREPY*TRSVGH
Trigger: GTGGCCCACTGATCTGGTCAAGTAAGGCTCCCTGGG...CAGAAGGGAGCATGTCTCCTGGAAAGCGAGCAACCCTGAGTCTGACCAGAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR GCA 72 bp CAGGGTTGCTCGCTTTCCAGGAGACATGCTCCCTTCTaGTGTGGGGAAGCAGCTTCCAAGCCTCAGGTTCCA +
Preference number: 3 (lower is better)
Translates to: QGCSLSRRHAPF*CGEAASKPQVP
Trigger: TGGAACCTGAGGCTTGGAAGCTGCTTCCCCACAGCAGAAGGGAGCATGTCTCCTGGAAAGCGAGCAACCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR GCA 72 bp TGGTCAGACTCAGGGTTGCTCGCTTTCCAGGAGACATaGTCCCTTCTGCTGTGGGGAAGCAGCTTCCAAGCC +
Preference number: 3 (lower is better)
Translates to: WSDSGLLAFQET*SLLLWGSSFQA
Trigger: GGCTTGGAAGCTGCTTCCCCACAGCAGAAGGGAGCATGTCTCCTGGAAAGCGAGCAACCCTGAGTCTGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR CCA 72 bp TTGCTCGCTTTCCAGGAGACATGCTCCCTTCTGCTGTaGGGAAGCAGCTTCCAAGCCTCAGGTTCCAGCTAC +
Preference number: 3 (lower is better)
Translates to: LLAFQETCSLLL*GSSFQASGSSY
Trigger: GTAGCTGGAACCTGAGGCTTGGAAGCTGCTTCCCCACAGCAGAAGGGAGCATGTCTCCTGGAAAGCGAGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR-3UTR CAA 90 bp TGGTTTCCATGGTGGCTGGGGTCATGGGACTGCTTTGGCTACAGAGCTATGGATGGCAAAGCTGCTCTGTaGCCCTTGGGCTTCAGGAAC +
Preference number: 3 (lower is better)
Translates to: WFPWWLGSWDCFGYRAMDGKAAL*PLGFRN
Trigger: GTTCCTGAAGCCCAAGGGCAACAGAGCAGCTTTGCC...ATCCATAGCTCTGTAGCCAAAGCAGTCCCATGACCCCAGCCACCATGGAAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR TCA 72 bp GAGAGGGTTTCTGGCTCCTTAAAGGCCATAAACAGGTaGCTGTCCTCAACAGCCACTAGGTGGGCTGTGGGG +
Preference number: 3 (lower is better)
Translates to: ERVSGSLKAINR*LSSTATRWAVG
Trigger: CCCCACAGCCCACCTAGTGGCTGTTGAGGACAGTCACCTGTTTATGGCCTTTAAGGAGCCAGAAACCCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114988.8
3UTR CCA 72 bp AGCAGAAAGACATCCAGACAGACTGCAGGCTCACGCTaGACTACGGGGGCTTTCCCCATCAGTGCAAATCGT +
Preference number: 3 (lower is better)
Translates to: SRKTSRQTAGSR*TTGAFPISANR
Trigger: ACGATTTGCACTGATGGGGAAAGCCCCCGTAGTCCAGCGTGAGCCTGCAGTCTGTCTGGATGTCTTTCTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000114988.8
3UTR-3UTR CAA 90 bp GTTTCCATGGTGGCTGGGGTCATGGGACTGCTTTGGCTACAGAGCTATGGATGTCACGCAGTGAGACCTTaGAGGGAGGACATGGTATGG +
Preference number: 3 (lower is better)
Translates to: VSMVAGVMGLLWLQSYGCHAVRP*REDMVW
Trigger: CCATACCATGTCCTCCCTCAAAGGTCTCACTGCGTG...ACATCCATAGCTCTGTAGCCAAAGCAGTCCCATGACCCCAGCCACCATGGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR-3UTR CAA 90 bp TTTCCATGGTGGCTGGGGTCATGGGACTGCTTTGGCTACAGAGCTATGGATGTGTGGTCAGACTCAGGGTaGCTCGCTTTCCAGGAGACA +
Preference number: 3 (lower is better)
Translates to: FPWWLGSWDCFGYRAMDVWSDSG*LAFQET
Trigger: TGTCTCCTGGAAAGCGAGCAACCCTGAGTCTGACCA...CACATCCATAGCTCTGTAGCCAAAGCAGTCCCATGACCCCAGCCACCATGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR-3UTR CAA 90 bp GGTTTCCATGGTGGCTGGGGTCATGGGACTGCTTTGGCTACAGAGCTATGGATGGCTGCTCTGTTGCCCTaGGGCTTCAGGAACAACAAA +
Preference number: 3 (lower is better)
Translates to: GFHGGWGHGTALATELWMAALLP*GFRNNK
Trigger: TTTGTTGTTCCTGAAGCCCAAGGGCAACAGAGCAGC...CATCCATAGCTCTGTAGCCAAAGCAGTCCCATGACCCCAGCCACCATGGAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR TCA 72 bp GGTCATGGGACTGCTTTGGCTACAGAGCTATGGATGTaGTCTGGGCAAAGCTGCTCTGTTGCCCTTGGGCTT +
Preference number: 3 (lower is better)
Translates to: GHGTALATELWM*SGQSCSVALGL
Trigger: AAGCCCAAGGGCAACAGAGCAGCTTTGCCCAGATCACATCCATAGCTCTGTAGCCAAAGCAGTCCCATGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR GCA 72 bp CTCAGACCAAGCCCAGAAGCCCTCCAGGCTCTCTTGTaGTGTGGCAGCCAATGCTTACCTGACTTTCATTTC +
Preference number: 3 (lower is better)
Translates to: LRPSPEALQALL*CGSQCLPDFHF
Trigger: GAAATGAAAGTCAGGTAAGCATTGGCTGCCACAGCACAAGAGAGCCTGGAGGGCTTCTGGGCTTGGTCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114988.8
3UTR CCA 72 bp GTGGGTGCCCTTGGACCCCGCATCTCATCCTGGCATTaGAGAGAGAGACTCCTGAAATCTGAAGATAACCCT +
Preference number: 3 (lower is better)
Translates to: VGALGPRISSWH*RERLLKSEDNP
Trigger: AGGGTTATCTTCAGATTTCAGGAGTCTCTCTCTCCAATGCCAGGATGAGATGCGGGGTCCAAGGGCACCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114988.8
3UTR-3UTR CAA 90 bp CCCATCAGTGCAAATCGTTTATTGTGTTGGTTTCCATGGTGGCTGGGGTCATGGGGCAAAGCTGCTCTGTaGCCCTTGGGCTTCAGGAAC +
Preference number: 3 (lower is better)
Translates to: PISANRLLCWFPWWLGSWGKAAL*PLGFRN
Trigger: GTTCCTGAAGCCCAAGGGCAACAGAGCAGCTTTGCC...CCATGACCCCAGCCACCATGGAAACCAACACAATAAACGATTTGCACTGATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR GCA 72 bp TTGTGTTGGTTTCCATGGTGGCTGGGGTCATGGGACTaGTTTGGCTACAGAGCTATGGATGTGATCTGGGCA +
Preference number: 3 (lower is better)
Translates to: LCWFPWWLGSWD*FGYRAMDVIWA
Trigger: TGCCCAGATCACATCCATAGCTCTGTAGCCAAAGCAGTCCCATGACCCCAGCCACCATGGAAACCAACACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR CCA 72 bp TTGGTTTCCATGGTGGCTGGGGTCATGGGACTGCTTTaGCTACAGAGCTATGGATGTGATCTGGGCAAAGCT +
Preference number: 3 (lower is better)
Translates to: LVSMVAGVMGLL*LQSYGCDLGKA
Trigger: AGCTTTGCCCAGATCACATCCATAGCTCTGTAGCCAAAGCAGTCCCATGACCCCAGCCACCATGGAAACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR CCA 72 bp AGAATGGTGGGTGCCCTTGGACCCCGCATCTCATCCTaGCATTGGAGAGAGAGACTCCTGAAATCTGAAGAT +
Preference number: 3 (lower is better)
Translates to: RMVGALGPRISS*HWRERLLKSED
Trigger: ATCTTCAGATTTCAGGAGTCTCTCTCTCCAATGCCAGGATGAGATGCGGGGTCCAAGGGCACCCACCATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114988.8
3UTR-3UTR CAA 90 bp CTTCAGGAACAACAAACAAGGCACAAGGTGAGACCGCCATCAGATAAGCACCAGCACGCAGTGAGACCTTaGAGGGAGGACATGGTATGG +
Preference number: 3 (lower is better)
Translates to: LQEQQTRHKVRPPSDKHQHAVRP*REDMVW
Trigger: CCATACCATGTCCTCCCTCAAAGGTCTCACTGCGTG...CTGGTGCTTATCTGATGGCGGTCTCACCTTGTGCCTTGTTTGTTGTTCCTGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR-3UTR CAA 90 bp CCCATCAGTGCAAATCGTTTATTGTGTTGGTTTCCATGGTGGCTGGGGTCATGGCACGCAGTGAGACCTTaGAGGGAGGACATGGTATGG +
Preference number: 3 (lower is better)
Translates to: PISANRLLCWFPWWLGSWHAVRP*REDMVW
Trigger: CCATACCATGTCCTCCCTCAAAGGTCTCACTGCGTG...CCATGACCCCAGCCACCATGGAAACCAACACAATAAACGATTTGCACTGATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR-3UTR CAA 90 bp CAGTGCAAATCGTTTATTGTGTTGGTTTCCATGGTGGCTGGGGTCATGGGACTGTGGTCAGACTCAGGGTaGCTCGCTTTCCAGGAGACA +
Preference number: 3 (lower is better)
Translates to: QCKSFIVLVSMVAGVMGLWSDSG*LAFQET
Trigger: TGTCTCCTGGAAAGCGAGCAACCCTGAGTCTGACCA...CAGTCCCATGACCCCAGCCACCATGGAAACCAACACAATAAACGATTTGCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR-3UTR CAA 90 bp CCCATCAGTGCAAATCGTTTATTGTGTTGGTTTCCATGGTGGCTGGGGTCATGGGCTGCTCTGTTGCCCTaGGGCTTCAGGAACAACAAA +
Preference number: 3 (lower is better)
Translates to: PISANRLLCWFPWWLGSWAALLP*GFRNNK
Trigger: TTTGTTGTTCCTGAAGCCCAAGGGCAACAGAGCAGC...CCATGACCCCAGCCACCATGGAAACCAACACAATAAACGATTTGCACTGATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR TCA 72 bp CCCTTGGGCTTCAGGAACAACAAACAAGGCACAAGGTaGGACCGCCATCAGATAAGCACCAGAGTAGGGAAA +
Preference number: 3 (lower is better)
Translates to: PLGFRNNKQGTR*DRHQISTRVGK
Trigger: TTTCCCTACTCTGGTGCTTATCTGATGGCGGTCTCACCTTGTGCCTTGTTTGTTGTTCCTGAAGCCCAAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR-3UTR CAA 90 bp CAAATCGTTTATTGTGTTGGTTTCCATGGTGGCTGGGGTCATGGGACTGCTTTGGCTGCTCTGTTGCCCTaGGGCTTCAGGAACAACAAA +
Preference number: 3 (lower is better)
Translates to: QIVYCVGFHGGWGHGTALAALLP*GFRNNK
Trigger: TTTGTTGTTCCTGAAGCCCAAGGGCAACAGAGCAGC...CAAAGCAGTCCCATGACCCCAGCCACCATGGAAACCAACACAATAAACGATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR GCA 72 bp AGAGCTATGGATGTGATCTGGGCAAAGCTGCTCTGTTaGCCTTGGGCTTCAGGAACAACAAACAAGGCACAA +
Preference number: 3 (lower is better)
Translates to: RAMDVIWAKLLC*PWASGTTNKAQ
Trigger: TTGTGCCTTGTTTGTTGTTCCTGAAGCCCAAGGGCAACAGAGCAGCTTTGCCCAGATCACATCCATAGCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR CCA 72 bp CGTTTATTGTGTTGGTTTCCATGGTGGCTGGGGTCATaGGACTGCTTTGGCTACAGAGCTATGGATGTGATC +
Preference number: 3 (lower is better)
Translates to: RLLCWFPWWLGS*DCFGYRAMDVI
Trigger: GATCACATCCATAGCTCTGTAGCCAAAGCAGTCCCATGACCCCAGCCACCATGGAAACCAACACAATAAACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR CCA 72 bp CCCATCAGTGCAAATCGTTTATTGTGTTGGTTTCCATaGTGGCTGGGGTCATGGGACTGCTTTGGCTACAGA +
Preference number: 3 (lower is better)
Translates to: PISANRLLCWFP*WLGSWDCFGYR
Trigger: TCTGTAGCCAAAGCAGTCCCATGACCCCAGCCACCATGGAAACCAACACAATAAACGATTTGCACTGATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR GCA 72 bp AGGCACACCTGTGCACACTCTGGGCTTCTGTACATGTaGAGTTATGAGAACAAGTCTAAGTTCTGCAAACTT +
Preference number: 3 (lower is better)
Translates to: RHTCAHSGLLYM*SYENKSKFCKL
Trigger: AAGTTTGCAGAACTTAGACTTGTTCTCATAACTGCACATGTACAGAAGCCCAGAGTGTGCACAGGTGTGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114988.8
CDS-3UTR CCA 90 bp CCCTCGCACCCGGAGGCTCTGGTCAGACTCAGGGTTGCTCGCTTTCCAGGAGACCAGGCTTGTGGATGGTaGGCCCCCAGGCAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: PSHPEALVRLRVARFPGDQACGW*APRQAW
Trigger: CCAAGCCTGCCTGGGGGCCCACCATCCACAAGCCTG...GTCTCCTGGAAAGCGAGCAACCCTGAGTCTGACCAGAGCCTCCGGGTGCGAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR GCA 90 bp CCCTCGCACCCGGAGGCTCTGGTCAGACTCAGGGTTGCTCGCTTTCCAGGAGACCTAGCTCCAGCAGGATaGCAGGCAGGGTCGGGTGGA +
Preference number: 4 (lower is better)
Translates to: PSHPEALVRLRVARFPGDLAPAG*QAGSGG
Trigger: TCCACCCGACCCTGCCTGGCATCCTGCTGGAGCTAG...GTCTCCTGGAAAGCGAGCAACCCTGAGTCTGACCAGAGCCTCCGGGTGCGAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp CCTCAGGTTCCAGCTACAGCCCTGAGTTTCGTGACCCCTGAGGGACAGTGCCGACAGGCTTGTGGATGGTaGGCCCCCAGGCAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: PQVPATALSFVTPEGQCRQACGW*APRQAW
Trigger: CCAAGCCTGCCTGGGGGCCCACCATCCACAAGCCTG...TCGGCACTGTCCCTCAGGGGTCACGAAACTCAGGGCTGTAGCTGGAACCTGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp CCCGGAGGCTCTGGTCAGACTCAGGGTTGCTCGCTTTCCAGGAGACATGCTCCCGGCAGCATGGCGGCTTaGCTCAAGCAGGACGGCATC +
Preference number: 4 (lower is better)
Translates to: PGGSGQTQGCSLSRRHAPGSMAA*LKQDGI
Trigger: GATGCCGTCCTGCTTGAGCCAAGCCGCCATGCTGCC...GGGAGCATGTCTCCTGGAAAGCGAGCAACCCTGAGTCTGACCAGAGCCTCCGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR TCA 90 bp CCCTCGCACCCGGAGGCTCTGGTCAGACTCAGGGTTGCTCGCTTTCCAGGAGACAATAGAGAGCTCCACTaGCCTCCTGTCCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: PSHPEALVRLRVARFPGDNRELH*PPVPPG
Trigger: CCCAGGAGGGACAGGAGGTCAGTGGAGCTCTCTATT...GTCTCCTGGAAAGCGAGCAACCCTGAGTCTGACCAGAGCCTCCGGGTGCGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR GCA 90 bp GCGTACAGTCTGGAAATCCCTCGCACCCGGAGGCTCTGGTCAGACTCAGGGTTGCTAGCTCCAGCAGGATaGCAGGCAGGGTCGGGTGGA +
Preference number: 4 (lower is better)
Translates to: AYSLEIPRTRRLWSDSGLLAPAG*QAGSGG
Trigger: TCCACCCGACCCTGCCTGGCATCCTGCTGGAGCTAG...CAACCCTGAGTCTGACCAGAGCCTCCGGGTGCGAGGGATTTCCAGACTGTACGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR GCA 90 bp CCTCAGGTTCCAGCTACAGCCCTGAGTTTCGTGACCCCTGAGGGACAGTGCCGACTAGCTCCAGCAGGATaGCAGGCAGGGTCGGGTGGA +
Preference number: 4 (lower is better)
Translates to: PQVPATALSFVTPEGQCRLAPAG*QAGSGG
Trigger: TCCACCCGACCCTGCCTGGCATCCTGCTGGAGCTAG...TCGGCACTGTCCCTCAGGGGTCACGAAACTCAGGGCTGTAGCTGGAACCTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp CCCGGAGGCTCTGGTCAGACTCAGGGTTGCTCGCTTTCCAGGAGACATGCTCCCACAAGGGCGACATCTTaGGCCACGGGTCTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: PGGSGQTQGCSLSRRHAPTRATS*ATGLSQ
Trigger: CTGGGAGAGACCCGTGGCCCAAGATGTCGCCCTTGT...GGGAGCATGTCTCCTGGAAAGCGAGCAACCCTGAGTCTGACCAGAGCCTCCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp GGCCTGAGAGGGACTAGGGAGCAGCACAGCACACAGTGGTGGCTTTCCTGGGAGAGGCTTGGGAGGGGCTaGCTCCACAGGATAGACCCA +
Preference number: 4 (lower is better)
Translates to: GLRGTREQHSTQWWLSWERLGRG*LHRIDP
Trigger: TGGGTCTATCCTGTGGAGCCAGCCCCTCCCAAGCCT...CTCCCAGGAAAGCCACCACTGTGTGCTGTGCTGCTCCCTAGTCCCTCTCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp GGCGAAGGACTGACTCAGCGTACAGTCTGGAAATCCCTCGCACCCGGAGGCTCTGGCAGCATGGCGGCTTaGCTCAAGCAGGACGGCATC +
Preference number: 4 (lower is better)
Translates to: GEGLTQRTVWKSLAPGGSGSMAA*LKQDGI
Trigger: GATGCCGTCCTGCTTGAGCCAAGCCGCCATGCTGCC...AGAGCCTCCGGGTGCGAGGGATTTCCAGACTGTACGCTGAGTCAGTCCTTCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR GCA 90 bp GCGTACAGTCTGGAAATCCCTCGCACCCGGAGGCTCTGGTCAGACTCAGGGTTGTCTCCCAGAGCACGCTaGCATTGGCTCCTGACACCG +
Preference number: 4 (lower is better)
Translates to: AYSLEIPRTRRLWSDSGLSPRAR*HWLLTP
Trigger: CGGTGTCAGGAGCCAATGGCAGCGTGCTCTGGGAGA...CAACCCTGAGTCTGACCAGAGCCTCCGGGTGCGAGGGATTTCCAGACTGTACGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR GCA 90 bp CCTCAGGTTCCAGCTACAGCCCTGAGTTTCGTGACCCCTGAGGGACAGTGCCGATCTCCCAGAGCACGCTaGCATTGGCTCCTGACACCG +
Preference number: 4 (lower is better)
Translates to: PQVPATALSFVTPEGQCRSPRAR*HWLLTP
Trigger: CGGTGTCAGGAGCCAATGGCAGCGTGCTCTGGGAGA...TCGGCACTGTCCCTCAGGGGTCACGAAACTCAGGGCTGTAGCTGGAACCTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp GCGTACAGTCTGGAAATCCCTCGCACCCGGAGGCTCTGGTCAGACTCAGGGTTGACAAGGGCGACATCTTaGGCCACGGGTCTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: AYSLEIPRTRRLWSDSGLTRATS*ATGLSQ
Trigger: CTGGGAGAGACCCGTGGCCCAAGATGTCGCCCTTGT...CAACCCTGAGTCTGACCAGAGCCTCCGGGTGCGAGGGATTTCCAGACTGTACGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp CCCTCGCACCCGGAGGCTCTGGTCAGACTCAGGGTTGCTCGCTTTCCAGGAGACTCAATGTCAGGCACCTaGAGCAGAGGGCTCAGGATG +
Preference number: 4 (lower is better)
Translates to: PSHPEALVRLRVARFPGDSMSGT*SRGLRM
Trigger: CATCCTGAGCCCTCTGCTCCAGGTGCCTGACATTGA...GTCTCCTGGAAAGCGAGCAACCCTGAGTCTGACCAGAGCCTCCGGGTGCGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp TCCCTCGCACCCGGAGGCTCTGGTCAGACTCAGGGTTGCTCGCTTTCCAGGAGACCAAGGCTGCCTCTGTaGCCAATCTGGTACCCAGTG +
Preference number: 4 (lower is better)
Translates to: SLAPGGSGQTQGCSLSRRPRLPL*PIWYPV
Trigger: CACTGGGTACCAGATTGGCCACAGAGGCAGCCTTGG...TCTCCTGGAAAGCGAGCAACCCTGAGTCTGACCAGAGCCTCCGGGTGCGAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp GTCTGGAAATCCCTCGCACCCGGAGGCTCTGGTCAGACTCAGGGTTGCTCGCTTAGGCTTGGGAGGGGCTaGCTCCACAGGATAGACCCA +
Preference number: 4 (lower is better)
Translates to: VWKSLAPGGSGQTQGCSLRLGRG*LHRIDP
Trigger: TGGGTCTATCCTGTGGAGCCAGCCCCTCCCAAGCCT...AAGCGAGCAACCCTGAGTCTGACCAGAGCCTCCGGGTGCGAGGGATTTCCAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp CGAATCATCAGGGCGAGCAGTGAGGTCAGCATGAAGGCCGAGAGCAGGCCAGCTAGGCTTGGGAGGGGCTaGCTCCACAGGATAGACCCA +
Preference number: 4 (lower is better)
Translates to: RIIRASSEVSMKAESRPARLGRG*LHRIDP
Trigger: TGGGTCTATCCTGTGGAGCCAGCCCCTCCCAAGCCT...AGCTGGCCTGCTCTCGGCCTTCATGCTGACCTCACTGCTCGCCCTGATGATTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR TCA 90 bp CCTCAGGTTCCAGCTACAGCCCTGAGTTTCGTGACCCCTGAGGGACAGTGCCGAAATAGAGAGCTCCACTaGCCTCCTGTCCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: PQVPATALSFVTPEGQCRNRELH*PPVPPG
Trigger: CCCAGGAGGGACAGGAGGTCAGTGGAGCTCTCTATT...TCGGCACTGTCCCTCAGGGGTCACGAAACTCAGGGCTGTAGCTGGAACCTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR TCA 90 bp GCGTACAGTCTGGAAATCCCTCGCACCCGGAGGCTCTGGTCAGACTCAGGGTTGAATAGAGAGCTCCACTaGCCTCCTGTCCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: AYSLEIPRTRRLWSDSGLNRELH*PPVPPG
Trigger: CCCAGGAGGGACAGGAGGTCAGTGGAGCTCTCTATT...CAACCCTGAGTCTGACCAGAGCCTCCGGGTGCGAGGGATTTCCAGACTGTACGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR TCA 90 bp GGCCTGAGAGGGACTAGGGAGCAGCACAGCACACAGTGGTGGCTTTCCTGGGAGCCAGAAGAAGAAGGCTaGGCGGTGGTCTGCAGTCAT +
Preference number: 4 (lower is better)
Translates to: GLRGTREQHSTQWWLSWEPEEEG*AVVCSH
Trigger: ATGACTGCAGACCACCGCTCAGCCTTCTTCTTCTGG...CTCCCAGGAAAGCCACCACTGTGTGCTGTGCTGCTCCCTAGTCCCTCTCAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR GCA 90 bp GAGCAGCACAGCACACAGTGGTGGCTTTCCTGGGAGAGGGTAAGGAGGCAGGAATCTCCCAGAGCACGCTaGCATTGGCTCCTGACACCG +
Preference number: 4 (lower is better)
Translates to: EQHSTQWWLSWERVRRQESPRAR*HWLLTP
Trigger: CGGTGTCAGGAGCCAATGGCAGCGTGCTCTGGGAGA...TTCCTGCCTCCTTACCCTCTCCCAGGAAAGCCACCACTGTGTGCTGTGCTGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR GCA 90 bp GGCCTGAGAGGGACTAGGGAGCAGCACAGCACACAGTGGTGGCTTTCCTGGGAGCATCCACACCAAGGCTaGCTCTGTGGCCAATCTGGT +
Preference number: 4 (lower is better)
Translates to: GLRGTREQHSTQWWLSWEHPHQG*LCGQSG
Trigger: ACCAGATTGGCCACAGAGGCAGCCTTGGTGTGGATG...CTCCCAGGAAAGCCACCACTGTGTGCTGTGCTGCTCCCTAGTCCCTCTCAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR GCA 90 bp ATCCCTCGCACCCGGAGGCTCTGGTCAGACTCAGGGTTGCTCGCTTTCCAGGAGCATCCACACCAAGGCTaGCTCTGTGGCCAATCTGGT +
Preference number: 4 (lower is better)
Translates to: IPRTRRLWSDSGLLAFQEHPHQG*LCGQSG
Trigger: ACCAGATTGGCCACAGAGGCAGCCTTGGTGTGGATG...CTCCTGGAAAGCGAGCAACCCTGAGTCTGACCAGAGCCTCCGGGTGCGAGGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR GCA 90 bp AGGCTCTGGTCAGACTCAGGGTTGCTCGCTTTCCAGGAGACATGCTCCCTTCTGCTAGCTCCAGCAGGATaGCAGGCAGGGTCGGGTGGA +
Preference number: 4 (lower is better)
Translates to: RLWSDSGLLAFQETCSLLLAPAG*QAGSGG
Trigger: TCCACCCGACCCTGCCTGGCATCCTGCTGGAGCTAG...CAGAAGGGAGCATGTCTCCTGGAAAGCGAGCAACCCTGAGTCTGACCAGAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp CCCGGAGGCTCTGGTCAGACTCAGGGTTGCTCGCTTTCCAGGAGACATGCTCCCTCAATGTCAGGCACCTaGAGCAGAGGGCTCAGGATG +
Preference number: 4 (lower is better)
Translates to: PGGSGQTQGCSLSRRHAPSMSGT*SRGLRM
Trigger: CATCCTGAGCCCTCTGCTCCAGGTGCCTGACATTGA...GGGAGCATGTCTCCTGGAAAGCGAGCAACCCTGAGTCTGACCAGAGCCTCCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp CCCTCGCACCCGGAGGCTCTGGTCAGACTCAGGGTTGCTCGCTTTCCAGGAGACCCTCTGTGGCCAATCTaGTACCCAGTGCTACCTGAA +
Preference number: 4 (lower is better)
Translates to: PSHPEALVRLRVARFPGDPLWPI*YPVLPE
Trigger: TTCAGGTAGCACTGGGTACCAGATTGGCCACAGAGG...GTCTCCTGGAAAGCGAGCAACCCTGAGTCTGACCAGAGCCTCCGGGTGCGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp GTCTGGAAATCCCTCGCACCCGGAGGCTCTGGTCAGACTCAGGGTTGCTCGCTTCCAAGGCTGCCTCTGTaGCCAATCTGGTACCCAGTG +
Preference number: 4 (lower is better)
Translates to: VWKSLAPGGSGQTQGCSLPRLPL*PIWYPV
Trigger: CACTGGGTACCAGATTGGCCACAGAGGCAGCCTTGG...AAGCGAGCAACCCTGAGTCTGACCAGAGCCTCCGGGTGCGAGGGATTTCCAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp GCGTACAGTCTGGAAATCCCTCGCACCCGGAGGCTCTGGTCAGACTCAGGGTTGCCAAGGCTGCCTCTGTaGCCAATCTGGTACCCAGTG +
Preference number: 4 (lower is better)
Translates to: AYSLEIPRTRRLWSDSGLPRLPL*PIWYPV
Trigger: CACTGGGTACCAGATTGGCCACAGAGGCAGCCTTGG...CAACCCTGAGTCTGACCAGAGCCTCCGGGTGCGAGGGATTTCCAGACTGTACGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp CCCTCGCACCCGGAGGCTCTGGTCAGACTCAGGGTTGCTCGCTTTCCAGGAGACCTGGCCAGCTTTCCCTaGGATATTCATCAGGTAGCG +
Preference number: 4 (lower is better)
Translates to: PSHPEALVRLRVARFPGDLASFP*DIHQVA
Trigger: CGCTACCTGATGAATATCCCAGGGAAAGCTGGCCAG...GTCTCCTGGAAAGCGAGCAACCCTGAGTCTGACCAGAGCCTCCGGGTGCGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp ATCAGGGCGAGCAGTGAGGTCAGCATGAAGGCCGAGAGCAGGCCAGCTTTCCAAAGGCTTGGGAGGGGCTaGCTCCACAGGATAGACCCA +
Preference number: 4 (lower is better)
Translates to: IRASSEVSMKAESRPAFQRLGRG*LHRIDP
Trigger: TGGGTCTATCCTGTGGAGCCAGCCCCTCCCAAGCCT...TTGGAAAGCTGGCCTGCTCTCGGCCTTCATGCTGACCTCACTGCTCGCCCTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp AGGAGACATGCTCCCTTCTGCTGTGGGGAAGCAGCTTCCAAGCCTCAGGTTCCAGGCAGCATGGCGGCTTaGCTCAAGCAGGACGGCATC +
Preference number: 4 (lower is better)
Translates to: RRHAPFCCGEAASKPQVPGSMAA*LKQDGI
Trigger: GATGCCGTCCTGCTTGAGCCAAGCCGCCATGCTGCC...TGGAACCTGAGGCTTGGAAGCTGCTTCCCCACAGCAGAAGGGAGCATGTCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp AGGCTCTGGTCAGACTCAGGGTTGCTCGCTTTCCAGGAGACATGCTCCCTTCTGGGCAGCATGGCGGCTTaGCTCAAGCAGGACGGCATC +
Preference number: 4 (lower is better)
Translates to: RLWSDSGLLAFQETCSLLGSMAA*LKQDGI
Trigger: GATGCCGTCCTGCTTGAGCCAAGCCGCCATGCTGCC...CAGAAGGGAGCATGTCTCCTGGAAAGCGAGCAACCCTGAGTCTGACCAGAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR TCA 90 bp TCCCTCGCACCCGGAGGCTCTGGTCAGACTCAGGGTTGCTCGCTTTCCAGGAGAGTACCCAGTGCTACCTaGATAGAGAGCTCCACTGAC +
Preference number: 4 (lower is better)
Translates to: SLAPGGSGQTQGCSLSRRVPSAT*IESSTD
Trigger: GTCAGTGGAGCTCTCTATTCAGGTAGCACTGGGTAC...TCTCCTGGAAAGCGAGCAACCCTGAGTCTGACCAGAGCCTCCGGGTGCGAGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR TCA 90 bp GTCTGGAAATCCCTCGCACCCGGAGGCTCTGGTCAGACTCAGGGTTGCTCGCTTCCAGAAGAAGAAGGCTaGGCGGTGGTCTGCAGTCAT +
Preference number: 4 (lower is better)
Translates to: VWKSLAPGGSGQTQGCSLPEEEG*AVVCSH
Trigger: ATGACTGCAGACCACCGCTCAGCCTTCTTCTTCTGG...AAGCGAGCAACCCTGAGTCTGACCAGAGCCTCCGGGTGCGAGGGATTTCCAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR GCA 90 bp GCGTACAGTCTGGAAATCCCTCGCACCCGGAGGCTCTGGTCAGACTCAGGGTTGCATCCACACCAAGGCTaGCTCTGTGGCCAATCTGGT +
Preference number: 4 (lower is better)
Translates to: AYSLEIPRTRRLWSDSGLHPHQG*LCGQSG
Trigger: ACCAGATTGGCCACAGAGGCAGCCTTGGTGTGGATG...CAACCCTGAGTCTGACCAGAGCCTCCGGGTGCGAGGGATTTCCAGACTGTACGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp ATCCCTCGCACCCGGAGGCTCTGGTCAGACTCAGGGTTGCTCGCTTTCCAGGAGGGGACGGTCTGGACATaGGATGATGAAAGACAGGAC +
Preference number: 4 (lower is better)
Translates to: IPRTRRLWSDSGLLAFQEGTVWT*DDERQD
Trigger: GTCCTGTCTTTCATCATCCCATGTCCAGACCGTCCC...CTCCTGGAAAGCGAGCAACCCTGAGTCTGACCAGAGCCTCCGGGTGCGAGGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp GCTCTGGTCAGACTCAGGGTTGCTCGCTTTCCAGGAGACATGCTCCCTTCTGCTACAAGGGCGACATCTTaGGCCACGGGTCTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: ALVRLRVARFPGDMLPSATRATS*ATGLSQ
Trigger: CTGGGAGAGACCCGTGGCCCAAGATGTCGCCCTTGT...AGCAGAAGGGAGCATGTCTCCTGGAAAGCGAGCAACCCTGAGTCTGACCAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp AGGAGACATGCTCCCTTCTGCTGTGGGGAAGCAGCTTCCAAGCCTCAGGTTCCAACAAGGGCGACATCTTaGGCCACGGGTCTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: RRHAPFCCGEAASKPQVPTRATS*ATGLSQ
Trigger: CTGGGAGAGACCCGTGGCCCAAGATGTCGCCCTTGT...TGGAACCTGAGGCTTGGAAGCTGCTTCCCCACAGCAGAAGGGAGCATGTCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp GGCCTGAGAGGGACTAGGGAGCAGCACAGCACACAGTGGTGGCTTTCCTGGGAGCTAAAGCTGCTGGGATaGCTCCACAGGGTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: GLRGTREQHSTQWWLSWELKLLG*LHRVSP
Trigger: AGGAGAAACCCTGTGGAGCCATCCCAGCAGCTTTAG...CTCCCAGGAAAGCCACCACTGTGTGCTGTGCTGCTCCCTAGTCCCTCTCAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp TCCCTCGCACCCGGAGGCTCTGGTCAGACTCAGGGTTGCTCGCTTTCCAGGAGACCTCTGTGGCCAATCTaGTACCCAGTGCTACCTGAA +
Preference number: 4 (lower is better)
Translates to: SLAPGGSGQTQGCSLSRRPLWPI*YPVLPE
Trigger: TTCAGGTAGCACTGGGTACCAGATTGGCCACAGAGG...TCTCCTGGAAAGCGAGCAACCCTGAGTCTGACCAGAGCCTCCGGGTGCGAGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp GGCCTGAGAGGGACTAGGGAGCAGCACAGCACACAGTGGTGGCTTTCCTGGGAGCCTCTGTGGCCAATCTaGTACCCAGTGCTACCTGAA +
Preference number: 4 (lower is better)
Translates to: GLRGTREQHSTQWWLSWEPLWPI*YPVLPE
Trigger: TTCAGGTAGCACTGGGTACCAGATTGGCCACAGAGG...CTCCCAGGAAAGCCACCACTGTGTGCTGTGCTGCTCCCTAGTCCCTCTCAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp GAGCAGCACAGCACACAGTGGTGGCTTTCCTGGGAGAGGGTAAGGAGGCAGGAACCAAGGCTGCCTCTGTaGCCAATCTGGTACCCAGTG +
Preference number: 4 (lower is better)
Translates to: EQHSTQWWLSWERVRRQEPRLPL*PIWYPV
Trigger: CACTGGGTACCAGATTGGCCACAGAGGCAGCCTTGG...TTCCTGCCTCCTTACCCTCTCCCAGGAAAGCCACCACTGTGTGCTGTGCTGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp ATCAGGGCGAGCAGTGAGGTCAGCATGAAGGCCGAGAGCAGGCCAGCTTTCCAACCAAGGCTGCCTCTGTaGCCAATCTGGTACCCAGTG +
Preference number: 4 (lower is better)
Translates to: IRASSEVSMKAESRPAFQPRLPL*PIWYPV
Trigger: CACTGGGTACCAGATTGGCCACAGAGGCAGCCTTGG...TTGGAAAGCTGGCCTGCTCTCGGCCTTCATGCTGACCTCACTGCTCGCCCTGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp TCCCTCGCACCCGGAGGCTCTGGTCAGACTCAGGGTTGCTCGCTTTCCAGGAGACTGGCCAGCTTTCCCTaGGATATTCATCAGGTAGCG +
Preference number: 4 (lower is better)
Translates to: SLAPGGSGQTQGCSLSRRLASFP*DIHQVA
Trigger: CGCTACCTGATGAATATCCCAGGGAAAGCTGGCCAG...TCTCCTGGAAAGCGAGCAACCCTGAGTCTGACCAGAGCCTCCGGGTGCGAGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp GTTTCCATGGTGGCTGGGGTCATGGGACTGCTTTGGCTACAGAGCTATGGATGTCAGGCTTGTGGATGGTaGGCCCCCAGGCAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: VSMVAGVMGLLWLQSYGCQACGW*APRQAW
Trigger: CCAAGCCTGCCTGGGGGCCCACCATCCACAAGCCTG...ACATCCATAGCTCTGTAGCCAAAGCAGTCCCATGACCCCAGCCACCATGGAAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp CCGAGAGCAGGCCAGCTTTCCAAGAGGCTTCCTTTTCACAGTTGGAATCTCTCCCAGGCTTGTGGATGGTaGGCCCCCAGGCAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: PRAGQLSKRLPFHSWNLSQACGW*APRQAW
Trigger: CCAAGCCTGCCTGGGGGCCCACCATCCACAAGCCTG...GGAGAGATTCCAACTGTGAAAAGGAAGCCTCTTGGAAAGCTGGCCTGCTCTCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp CCCTCGCACCCGGAGGCTCTGGTCAGACTCAGGGTTGCTCGCTTTCCAGGAGACGTGCTCACAAGATCATaGAGGCCCCAGAAGAAGAAG +
Preference number: 4 (lower is better)
Translates to: PSHPEALVRLRVARFPGDVLTRS*RPQKKK
Trigger: CTTCTTCTTCTGGGGCCTCCATGATCTTGTGAGCAC...GTCTCCTGGAAAGCGAGCAACCCTGAGTCTGACCAGAGCCTCCGGGTGCGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp CCTCAGGTTCCAGCTACAGCCCTGAGTTTCGTGACCCCTGAGGGACAGTGCCGACCAGGCAGGGTCGGGTaGAACATATACAGACTGTGC +
Preference number: 4 (lower is better)
Translates to: PQVPATALSFVTPEGQCRPGRVG*NIYRLC
Trigger: GCACAGTCTGTATATGTTCCACCCGACCCTGCCTGG...TCGGCACTGTCCCTCAGGGGTCACGAAACTCAGGGCTGTAGCTGGAACCTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp GGCGAAGGACTGACTCAGCGTACAGTCTGGAAATCCCTCGCACCCGGAGGCTCTCCAGGCAGGGTCGGGTaGAACATATACAGACTGTGC +
Preference number: 4 (lower is better)
Translates to: GEGLTQRTVWKSLAPGGSPGRVG*NIYRLC
Trigger: GCACAGTCTGTATATGTTCCACCCGACCCTGCCTGG...AGAGCCTCCGGGTGCGAGGGATTTCCAGACTGTACGCTGAGTCAGTCCTTCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR TCA 90 bp CCTCAGGTTCCAGCTACAGCCCTGAGTTTCGTGACCCCTGAGGGACAGTGCCGAGTACCCAGTGCTACCTaGATAGAGAGCTCCACTGAC +
Preference number: 4 (lower is better)
Translates to: PQVPATALSFVTPEGQCRVPSAT*IESSTD
Trigger: GTCAGTGGAGCTCTCTATTCAGGTAGCACTGGGTAC...TCGGCACTGTCCCTCAGGGGTCACGAAACTCAGGGCTGTAGCTGGAACCTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR GCA 90 bp GAGCAGCACAGCACACAGTGGTGGCTTTCCTGGGAGAGGGTAAGGAGGCAGGAACAGGGAAAGGAAAAATaGCACTGTGCGGCACCGGGA +
Preference number: 4 (lower is better)
Translates to: EQHSTQWWLSWERVRRQEQGKEK*HCAAPG
Trigger: TCCCGGTGCCGCACAGTGGCATTTTTCCTTTCCCTG...TTCCTGCCTCCTTACCCTCTCCCAGGAAAGCCACCACTGTGTGCTGTGCTGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR GCA 90 bp CCTCAGGTTCCAGCTACAGCCCTGAGTTTCGTGACCCCTGAGGGACAGTGCCGAACTGCTCCAAGTCTGTaGAGAAGCCTCCTGTGGACA +
Preference number: 4 (lower is better)
Translates to: PQVPATALSFVTPEGQCRTAPSL*RSLLWT
Trigger: TGTCCACAGGAGGCTTCTGCACAGACTTGGAGCAGT...TCGGCACTGTCCCTCAGGGGTCACGAAACTCAGGGCTGTAGCTGGAACCTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR GCA 90 bp GCGTACAGTCTGGAAATCCCTCGCACCCGGAGGCTCTGGTCAGACTCAGGGTTGACTGCTCCAAGTCTGTaGAGAAGCCTCCTGTGGACA +
Preference number: 4 (lower is better)
Translates to: AYSLEIPRTRRLWSDSGLTAPSL*RSLLWT
Trigger: TGTCCACAGGAGGCTTCTGCACAGACTTGGAGCAGT...CAACCCTGAGTCTGACCAGAGCCTCCGGGTGCGAGGGATTTCCAGACTGTACGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR GCA 90 bp TCCCTCGCACCCGGAGGCTCTGGTCAGACTCAGGGTTGCTCGCTTTCCAGGAGACATCAGGTAGCGAACTaGTCCAAGTCTGTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: SLAPGGSGQTQGCSLSRRHQVAN*SKSVQK
Trigger: CTTCTGCACAGACTTGGAGCAGTTCGCTACCTGATG...TCTCCTGGAAAGCGAGCAACCCTGAGTCTGACCAGAGCCTCCGGGTGCGAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp GGTTTCCATGGTGGCTGGGGTCATGGGACTGCTTTGGCTACAGAGCTATGGATGACAAGGGCGACATCTTaGGCCACGGGTCTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: GFHGGWGHGTALATELWMTRATS*ATGLSQ
Trigger: CTGGGAGAGACCCGTGGCCCAAGATGTCGCCCTTGT...CATCCATAGCTCTGTAGCCAAAGCAGTCCCATGACCCCAGCCACCATGGAAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp GTCTGGAAATCCCTCGCACCCGGAGGCTCTGGTCAGACTCAGGGTTGCTCGCTTCTAAAGCTGCTGGGATaGCTCCACAGGGTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: VWKSLAPGGSGQTQGCSLLKLLG*LHRVSP
Trigger: AGGAGAAACCCTGTGGAGCCATCCCAGCAGCTTTAG...AAGCGAGCAACCCTGAGTCTGACCAGAGCCTCCGGGTGCGAGGGATTTCCAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp GCGTACAGTCTGGAAATCCCTCGCACCCGGAGGCTCTGGTCAGACTCAGGGTTGCTAAAGCTGCTGGGATaGCTCCACAGGGTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: AYSLEIPRTRRLWSDSGLLKLLG*LHRVSP
Trigger: AGGAGAAACCCTGTGGAGCCATCCCAGCAGCTTTAG...CAACCCTGAGTCTGACCAGAGCCTCCGGGTGCGAGGGATTTCCAGACTGTACGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp CCTCAGGTTCCAGCTACAGCCCTGAGTTTCGTGACCCCTGAGGGACAGTGCCGACTAAAGCTGCTGGGATaGCTCCACAGGGTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: PQVPATALSFVTPEGQCRLKLLG*LHRVSP
Trigger: AGGAGAAACCCTGTGGAGCCATCCCAGCAGCTTTAG...TCGGCACTGTCCCTCAGGGGTCACGAAACTCAGGGCTGTAGCTGGAACCTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp CGCTTTCCAGGAGACATGCTCCCTTCTGCTGTGGGGAAGCAGCTTCCAAGCCTCTCAATGTCAGGCACCTaGAGCAGAGGGCTCAGGATG +
Preference number: 4 (lower is better)
Translates to: RFPGDMLPSAVGKQLPSLSMSGT*SRGLRM
Trigger: CATCCTGAGCCCTCTGCTCCAGGTGCCTGACATTGA...GAGGCTTGGAAGCTGCTTCCCCACAGCAGAAGGGAGCATGTCTCCTGGAAAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp GAGCAGCACAGCACACAGTGGTGGCTTTCCTGGGAGAGGGTAAGGAGGCAGGAATCAATGTCAGGCACCTaGAGCAGAGGGCTCAGGATG +
Preference number: 4 (lower is better)
Translates to: EQHSTQWWLSWERVRRQESMSGT*SRGLRM
Trigger: CATCCTGAGCCCTCTGCTCCAGGTGCCTGACATTGA...TTCCTGCCTCCTTACCCTCTCCCAGGAAAGCCACCACTGTGTGCTGTGCTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp GTCTGGAAATCCCTCGCACCCGGAGGCTCTGGTCAGACTCAGGGTTGCTCGCTTCCTCTGTGGCCAATCTaGTACCCAGTGCTACCTGAA +
Preference number: 4 (lower is better)
Translates to: VWKSLAPGGSGQTQGCSLPLWPI*YPVLPE
Trigger: TTCAGGTAGCACTGGGTACCAGATTGGCCACAGAGG...AAGCGAGCAACCCTGAGTCTGACCAGAGCCTCCGGGTGCGAGGGATTTCCAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp CCTCAGGTTCCAGCTACAGCCCTGAGTTTCGTGACCCCTGAGGGACAGTGCCGACTGGCCAGCTTTCCCTaGGATATTCATCAGGTAGCG +
Preference number: 4 (lower is better)
Translates to: PQVPATALSFVTPEGQCRLASFP*DIHQVA
Trigger: CGCTACCTGATGAATATCCCAGGGAAAGCTGGCCAG...TCGGCACTGTCCCTCAGGGGTCACGAAACTCAGGGCTGTAGCTGGAACCTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp GCGTACAGTCTGGAAATCCCTCGCACCCGGAGGCTCTGGTCAGACTCAGGGTTGCTGGCCAGCTTTCCCTaGGATATTCATCAGGTAGCG +
Preference number: 4 (lower is better)
Translates to: AYSLEIPRTRRLWSDSGLLASFP*DIHQVA
Trigger: CGCTACCTGATGAATATCCCAGGGAAAGCTGGCCAG...CAACCCTGAGTCTGACCAGAGCCTCCGGGTGCGAGGGATTTCCAGACTGTACGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp AGGCCAGCTTTCCAAGAGGCTTCCTTTTCACAGTTGGAATCTCTCCGTGTGCTCCAGGCTTGTGGATGGTaGGCCCCCAGGCAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: RPAFQEASFSQLESLRVLQACGW*APRQAW
Trigger: CCAAGCCTGCCTGGGGGCCCACCATCCACAAGCCTG...GAGCACACGGAGAGATTCCAACTGTGAAAAGGAAGCCTCTTGGAAAGCTGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp GGCGAAGGACTGACTCAGCGTACAGTCTGGAAATCCCTCGCACCCGGAGGCTCTAAGAAGGCTGAGCGGTaGTCTGCAGTCATCAGGCTT +
Preference number: 4 (lower is better)
Translates to: GEGLTQRTVWKSLAPGGSKKAER*SAVIRL
Trigger: AAGCCTGATGACTGCAGACCACCGCTCAGCCTTCTT...AGAGCCTCCGGGTGCGAGGGATTTCCAGACTGTACGCTGAGTCAGTCCTTCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp CCTCAGGTTCCAGCTACAGCCCTGAGTTTCGTGACCCCTGAGGGACAGTGCCGAAAGAAGGCTGAGCGGTaGTCTGCAGTCATCAGGCTT +
Preference number: 4 (lower is better)
Translates to: PQVPATALSFVTPEGQCRKKAER*SAVIRL
Trigger: AAGCCTGATGACTGCAGACCACCGCTCAGCCTTCTT...TCGGCACTGTCCCTCAGGGGTCACGAAACTCAGGGCTGTAGCTGGAACCTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp TCCCTCGCACCCGGAGGCTCTGGTCAGACTCAGGGTTGCTCGCTTTCCAGGAGAGTGCTCACAAGATCATaGAGGCCCCAGAAGAAGAAG +
Preference number: 4 (lower is better)
Translates to: SLAPGGSGQTQGCSLSRRVLTRS*RPQKKK
Trigger: CTTCTTCTTCTGGGGCCTCCATGATCTTGTGAGCAC...TCTCCTGGAAAGCGAGCAACCCTGAGTCTGACCAGAGCCTCCGGGTGCGAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp CGCTTTCCAGGAGACATGCTCCCTTCTGCTGTGGGGAAGCAGCTTCCAAGCCTCCCAGGCAGGGTCGGGTaGAACATATACAGACTGTGC +
Preference number: 4 (lower is better)
Translates to: RFPGDMLPSAVGKQLPSLPGRVG*NIYRLC
Trigger: GCACAGTCTGTATATGTTCCACCCGACCCTGCCTGG...GAGGCTTGGAAGCTGCTTCCCCACAGCAGAAGGGAGCATGTCTCCTGGAAAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp TTTCCATGGTGGCTGGGGTCATGGGACTGCTTTGGCTACAGAGCTATGGATGTGGGCAGCATGGCGGCTTaGCTCAAGCAGGACGGCATC +
Preference number: 4 (lower is better)
Translates to: FPWWLGSWDCFGYRAMDVGSMAA*LKQDGI
Trigger: GATGCCGTCCTGCTTGAGCCAAGCCGCCATGCTGCC...CACATCCATAGCTCTGTAGCCAAAGCAGTCCCATGACCCCAGCCACCATGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR TCA 90 bp GGCGAAGGACTGACTCAGCGTACAGTCTGGAAATCCCTCGCACCCGGAGGCTCTCAGCACAGGATCTGGTaGGATTGTTACTGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: GEGLTQRTVWKSLAPGGSQHRIW*DCYCCW
Trigger: CCAACAGCAGTAACAATCTCACCAGATCCTGTGCTG...AGAGCCTCCGGGTGCGAGGGATTTCCAGACTGTACGCTGAGTCAGTCCTTCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR TCA 90 bp ATCAGGGCGAGCAGTGAGGTCAGCATGAAGGCCGAGAGCAGGCCAGCTTTCCAAGTACCCAGTGCTACCTaGATAGAGAGCTCCACTGAC +
Preference number: 4 (lower is better)
Translates to: IRASSEVSMKAESRPAFQVPSAT*IESSTD
Trigger: GTCAGTGGAGCTCTCTATTCAGGTAGCACTGGGTAC...TTGGAAAGCTGGCCTGCTCTCGGCCTTCATGCTGACCTCACTGCTCGCCCTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR GCA 90 bp GATCTGGGCAAAGCTGCTCTGTTGCCCTTGGGCTTCAGGAACAACAAACAAGGCTCTCCCAGAGCACGCTaGCATTGGCTCCTGACACCG +
Preference number: 4 (lower is better)
Translates to: DLGKAALLPLGFRNNKQGSPRAR*HWLLTP
Trigger: CGGTGTCAGGAGCCAATGGCAGCGTGCTCTGGGAGA...GCCTTGTTTGTTGTTCCTGAAGCCCAAGGGCAACAGAGCAGCTTTGCCCAGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR GCA 90 bp GAGCAGCACAGCACACAGTGGTGGCTTTCCTGGGAGAGGGTAAGGAGGCAGGAAACTGCTCCAAGTCTGTaGAGAAGCCTCCTGTGGACA +
Preference number: 4 (lower is better)
Translates to: EQHSTQWWLSWERVRRQETAPSL*RSLLWT
Trigger: TGTCCACAGGAGGCTTCTGCACAGACTTGGAGCAGT...TTCCTGCCTCCTTACCCTCTCCCAGGAAAGCCACCACTGTGTGCTGTGCTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR GCA 90 bp GTCTGGAAATCCCTCGCACCCGGAGGCTCTGGTCAGACTCAGGGTTGCTCGCTTCATCAGGTAGCGAACTaGTCCAAGTCTGTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: VWKSLAPGGSGQTQGCSLHQVAN*SKSVQK
Trigger: CTTCTGCACAGACTTGGAGCAGTTCGCTACCTGATG...AAGCGAGCAACCCTGAGTCTGACCAGAGCCTCCGGGTGCGAGGGATTTCCAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR GCA 90 bp GCGTACAGTCTGGAAATCCCTCGCACCCGGAGGCTCTGGTCAGACTCAGGGTTGCATCAGGTAGCGAACTaGTCCAAGTCTGTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: AYSLEIPRTRRLWSDSGLHQVAN*SKSVQK
Trigger: CTTCTGCACAGACTTGGAGCAGTTCGCTACCTGATG...CAACCCTGAGTCTGACCAGAGCCTCCGGGTGCGAGGGATTTCCAGACTGTACGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR GCA 90 bp GGCGAAGGACTGACTCAGCGTACAGTCTGGAAATCCCTCGCACCCGGAGGCTCTATATACAGACTGTGCTaGACATCCGGGGGATCCATC +
Preference number: 4 (lower is better)
Translates to: GEGLTQRTVWKSLAPGGSIYRLC*TSGGSI
Trigger: GATGGATCCCCCGGATGTGCAGCACAGTCTGTATAT...AGAGCCTCCGGGTGCGAGGGATTTCCAGACTGTACGCTGAGTCAGTCCTTCGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp ATCAGGGCGAGCAGTGAGGTCAGCATGAAGGCCGAGAGCAGGCCAGCTTTCCAACTAAAGCTGCTGGGATaGCTCCACAGGGTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: IRASSEVSMKAESRPAFQLKLLG*LHRVSP
Trigger: AGGAGAAACCCTGTGGAGCCATCCCAGCAGCTTTAG...TTGGAAAGCTGGCCTGCTCTCGGCCTTCATGCTGACCTCACTGCTCGCCCTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp AGGAGACATGCTCCCTTCTGCTGTGGGGAAGCAGCTTCCAAGCCTCAGGTTCCATCAATGTCAGGCACCTaGAGCAGAGGGCTCAGGATG +
Preference number: 4 (lower is better)
Translates to: RRHAPFCCGEAASKPQVPSMSGT*SRGLRM
Trigger: CATCCTGAGCCCTCTGCTCCAGGTGCCTGACATTGA...TGGAACCTGAGGCTTGGAAGCTGCTTCCCCACAGCAGAAGGGAGCATGTCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp AGGCTCTGGTCAGACTCAGGGTTGCTCGCTTTCCAGGAGACATGCTCCCTTCTGTCAATGTCAGGCACCTaGAGCAGAGGGCTCAGGATG +
Preference number: 4 (lower is better)
Translates to: RLWSDSGLLAFQETCSLLSMSGT*SRGLRM
Trigger: CATCCTGAGCCCTCTGCTCCAGGTGCCTGACATTGA...CAGAAGGGAGCATGTCTCCTGGAAAGCGAGCAACCCTGAGTCTGACCAGAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp GGTTTCCATGGTGGCTGGGGTCATGGGACTGCTTTGGCTACAGAGCTATGGATGCCAAGGCTGCCTCTGTaGCCAATCTGGTACCCAGTG +
Preference number: 4 (lower is better)
Translates to: GFHGGWGHGTALATELWMPRLPL*PIWYPV
Trigger: CACTGGGTACCAGATTGGCCACAGAGGCAGCCTTGG...CATCCATAGCTCTGTAGCCAAAGCAGTCCCATGACCCCAGCCACCATGGAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp TGGTTTCCATGGTGGCTGGGGTCATGGGACTGCTTTGGCTACAGAGCTATGGATAGGCTTGGGAGGGGCTaGCTCCACAGGATAGACCCA +
Preference number: 4 (lower is better)
Translates to: WFPWWLGSWDCFGYRAMDRLGRG*LHRIDP
Trigger: TGGGTCTATCCTGTGGAGCCAGCCCCTCCCAAGCCT...ATCCATAGCTCTGTAGCCAAAGCAGTCCCATGACCCCAGCCACCATGGAAACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp CGCTTTCCAGGAGACATGCTCCCTTCTGCTGTGGGGAAGCAGCTTCCAAGCCTCAAGAAGGCTGAGCGGTaGTCTGCAGTCATCAGGCTT +
Preference number: 4 (lower is better)
Translates to: RFPGDMLPSAVGKQLPSLKKAER*SAVIRL
Trigger: AAGCCTGATGACTGCAGACCACCGCTCAGCCTTCTT...GAGGCTTGGAAGCTGCTTCCCCACAGCAGAAGGGAGCATGTCTCCTGGAAAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp TCATGGGACTGCTTTGGCTACAGAGCTATGGATGTGATCTGGGCAAAGCTGCTCGGCAGCATGGCGGCTTaGCTCAAGCAGGACGGCATC +
Preference number: 4 (lower is better)
Translates to: SWDCFGYRAMDVIWAKLLGSMAA*LKQDGI
Trigger: GATGCCGTCCTGCTTGAGCCAAGCCGCCATGCTGCC...GAGCAGCTTTGCCCAGATCACATCCATAGCTCTGTAGCCAAAGCAGTCCCATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR TCA 90 bp CGCTTTCCAGGAGACATGCTCCCTTCTGCTGTGGGGAAGCAGCTTCCAAGCCTCCAGCACAGGATCTGGTaGGATTGTTACTGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: RFPGDMLPSAVGKQLPSLQHRIW*DCYCCW
Trigger: CCAACAGCAGTAACAATCTCACCAGATCCTGTGCTG...GAGGCTTGGAAGCTGCTTCCCCACAGCAGAAGGGAGCATGTCTCCTGGAAAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR TCA 90 bp TTTCCATGGTGGCTGGGGTCATGGGACTGCTTTGGCTACAGAGCTATGGATGTGAATAGAGAGCTCCACTaGCCTCCTGTCCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: FPWWLGSWDCFGYRAMDVNRELH*PPVPPG
Trigger: CCCAGGAGGGACAGGAGGTCAGTGGAGCTCTCTATT...CACATCCATAGCTCTGTAGCCAAAGCAGTCCCATGACCCCAGCCACCATGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR TCA 90 bp GTTTCCATGGTGGCTGGGGTCATGGGACTGCTTTGGCTACAGAGCTATGGATGTAATAGAGAGCTCCACTaGCCTCCTGTCCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: VSMVAGVMGLLWLQSYGCNRELH*PPVPPG
Trigger: CCCAGGAGGGACAGGAGGTCAGTGGAGCTCTCTATT...ACATCCATAGCTCTGTAGCCAAAGCAGTCCCATGACCCCAGCCACCATGGAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR TCA 90 bp GCTCTGGTCAGACTCAGGGTTGCTCGCTTTCCAGGAGACATGCTCCCTTCTGCTGTACCCAGTGCTACCTaGATAGAGAGCTCCACTGAC +
Preference number: 4 (lower is better)
Translates to: ALVRLRVARFPGDMLPSAVPSAT*IESSTD
Trigger: GTCAGTGGAGCTCTCTATTCAGGTAGCACTGGGTAC...AGCAGAAGGGAGCATGTCTCCTGGAAAGCGAGCAACCCTGAGTCTGACCAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR TCA 90 bp CGCTTTCCAGGAGACATGCTCCCTTCTGCTGTGGGGAAGCAGCTTCCAAGCCTCTGGTTCCATTCTCAATaGCCACAGCCAAGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: RFPGDMLPSAVGKQLPSLWFHSQ*PQPRCQ
Trigger: CTGACACCTTGGCTGTGGTCATTGAGAATGGAACCA...GAGGCTTGGAAGCTGCTTCCCCACAGCAGAAGGGAGCATGTCTCCTGGAAAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR GCA 90 bp CAAGAGGCTTCCTTTTCACAGTTGGAATCTCTCCGTGTGCTCCAGCCGACAACATCTCCCAGAGCACGCTaGCATTGGCTCCTGACACCG +
Preference number: 4 (lower is better)
Translates to: QEASFSQLESLRVLQPTTSPRAR*HWLLTP
Trigger: CGGTGTCAGGAGCCAATGGCAGCGTGCTCTGGGAGA...TGTTGTCGGCTGGAGCACACGGAGAGATTCCAACTGTGAAAAGGAAGCCTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR GCA 90 bp AGGAGACATGCTCCCTTCTGCTGTGGGGAAGCAGCTTCCAAGCCTCAGGTTCCAACTGCTCCAAGTCTGTaGAGAAGCCTCCTGTGGACA +
Preference number: 4 (lower is better)
Translates to: RRHAPFCCGEAASKPQVPTAPSL*RSLLWT
Trigger: TGTCCACAGGAGGCTTCTGCACAGACTTGGAGCAGT...TGGAACCTGAGGCTTGGAAGCTGCTTCCCCACAGCAGAAGGGAGCATGTCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR GCA 90 bp ATCAGGGCGAGCAGTGAGGTCAGCATGAAGGCCGAGAGCAGGCCAGCTTTCCAACATCAGGTAGCGAACTaGTCCAAGTCTGTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: IRASSEVSMKAESRPAFQHQVAN*SKSVQK
Trigger: CTTCTGCACAGACTTGGAGCAGTTCGCTACCTGATG...TTGGAAAGCTGGCCTGCTCTCGGCCTTCATGCTGACCTCACTGCTCGCCCTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR GCA 90 bp GAGCAGCACAGCACACAGTGGTGGCTTTCCTGGGAGAGGGTAAGGAGGCAGGAAATATACAGACTGTGCTaGACATCCGGGGGATCCATC +
Preference number: 4 (lower is better)
Translates to: EQHSTQWWLSWERVRRQEIYRLC*TSGGSI
Trigger: GATGGATCCCCCGGATGTGCAGCACAGTCTGTATAT...TTCCTGCCTCCTTACCCTCTCCCAGGAAAGCCACCACTGTGTGCTGTGCTGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR GCA 90 bp CCTCAGGTTCCAGCTACAGCCCTGAGTTTCGTGACCCCTGAGGGACAGTGCCGACCTGGGACAAGGTCTTaGACTTTGTGTTTGGTGACA +
Preference number: 4 (lower is better)
Translates to: PQVPATALSFVTPEGQCRPGTRS*TLCLVT
Trigger: TGTCACCAAACACAAAGTGCAAGACCTTGTCCCAGG...TCGGCACTGTCCCTCAGGGGTCACGAAACTCAGGGCTGTAGCTGGAACCTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR GCA 90 bp GTCTGGAAATCCCTCGCACCCGGAGGCTCTGGTCAGACTCAGGGTTGCTCGCTTCCTGGGACAAGGTCTTaGACTTTGTGTTTGGTGACA +
Preference number: 4 (lower is better)
Translates to: VWKSLAPGGSGQTQGCSLPGTRS*TLCLVT
Trigger: TGTCACCAAACACAAAGTGCAAGACCTTGTCCCAGG...AAGCGAGCAACCCTGAGTCTGACCAGAGCCTCCGGGTGCGAGGGATTTCCAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp AGGAGACATGCTCCCTTCTGCTGTGGGGAAGCAGCTTCCAAGCCTCAGGTTCCAGGGACGGTCTGGACATaGGATGATGAAAGACAGGAC +
Preference number: 4 (lower is better)
Translates to: RRHAPFCCGEAASKPQVPGTVWT*DDERQD
Trigger: GTCCTGTCTTTCATCATCCCATGTCCAGACCGTCCC...TGGAACCTGAGGCTTGGAAGCTGCTTCCCCACAGCAGAAGGGAGCATGTCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp GCTCTGGTCAGACTCAGGGTTGCTCGCTTTCCAGGAGACATGCTCCCTTCTGCTGGGACGGTCTGGACATaGGATGATGAAAGACAGGAC +
Preference number: 4 (lower is better)
Translates to: ALVRLRVARFPGDMLPSAGTVWT*DDERQD
Trigger: GTCCTGTCTTTCATCATCCCATGTCCAGACCGTCCC...AGCAGAAGGGAGCATGTCTCCTGGAAAGCGAGCAACCCTGAGTCTGACCAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp TCATGGGACTGCTTTGGCTACAGAGCTATGGATGTGATCTGGGCAAAGCTGCTCACAAGGGCGACATCTTaGGCCACGGGTCTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: SWDCFGYRAMDVIWAKLLTRATS*ATGLSQ
Trigger: CTGGGAGAGACCCGTGGCCCAAGATGTCGCCCTTGT...GAGCAGCTTTGCCCAGATCACATCCATAGCTCTGTAGCCAAAGCAGTCCCATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp AGGCCAGCTTTCCAAGAGGCTTCCTTTTCACAGTTGGAATCTCTCCGTGTGCTCACAAGGGCGACATCTTaGGCCACGGGTCTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: RPAFQEASFSQLESLRVLTRATS*ATGLSQ
Trigger: CTGGGAGAGACCCGTGGCCCAAGATGTCGCCCTTGT...GAGCACACGGAGAGATTCCAACTGTGAAAAGGAAGCCTCTTGGAAAGCTGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp CGAGAGCAGGCCAGCTTTCCAAGAGGCTTCCTTTTCACAGTTGGAATCTCTCCGCCAAGGCTGCCTCTGTaGCCAATCTGGTACCCAGTG +
Preference number: 4 (lower is better)
Translates to: REQASFPRGFLFTVGISPPRLPL*PIWYPV
Trigger: CACTGGGTACCAGATTGGCCACAGAGGCAGCCTTGG...CGGAGAGATTCCAACTGTGAAAAGGAAGCCTCTTGGAAAGCTGGCCTGCTCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp GCTCTGGTCAGACTCAGGGTTGCTCGCTTTCCAGGAGACATGCTCCCTTCTGCTAAGAAGGCTGAGCGGTaGTCTGCAGTCATCAGGCTT +
Preference number: 4 (lower is better)
Translates to: ALVRLRVARFPGDMLPSAKKAER*SAVIRL
Trigger: AAGCCTGATGACTGCAGACCACCGCTCAGCCTTCTT...AGCAGAAGGGAGCATGTCTCCTGGAAAGCGAGCAACCCTGAGTCTGACCAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR TCA 90 bp ATCCCTCGCACCCGGAGGCTCTGGTCAGACTCAGGGTTGCTCGCTTTCCAGGAGTCCTGGGTTTTCCTGTaGTTTCTTGTCCTCATTCTT +
Preference number: 4 (lower is better)
Translates to: IPRTRRLWSDSGLLAFQESWVFL*FLVLIL
Trigger: AAGAATGAGGACAAGAAATCACAGGAAAACCCAGGA...CTCCTGGAAAGCGAGCAACCCTGAGTCTGACCAGAGCCTCCGGGTGCGAGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR TCA 90 bp CCCGGAGGCTCTGGTCAGACTCAGGGTTGCTCGCTTTCCAGGAGACATGCTCCCTCCTGGGTTTTCCTGTaGTTTCTTGTCCTCATTCTT +
Preference number: 4 (lower is better)
Translates to: PGGSGQTQGCSLSRRHAPSWVFL*FLVLIL
Trigger: AAGAATGAGGACAAGAAATCACAGGAAAACCCAGGA...GGGAGCATGTCTCCTGGAAAGCGAGCAACCCTGAGTCTGACCAGAGCCTCCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR TCA 90 bp GCTCTGGTCAGACTCAGGGTTGCTCGCTTTCCAGGAGACATGCTCCCTTCTGCTCAGCACAGGATCTGGTaGGATTGTTACTGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: ALVRLRVARFPGDMLPSAQHRIW*DCYCCW
Trigger: CCAACAGCAGTAACAATCTCACCAGATCCTGTGCTG...AGCAGAAGGGAGCATGTCTCCTGGAAAGCGAGCAACCCTGAGTCTGACCAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR TCA 90 bp GCTCTGGTCAGACTCAGGGTTGCTCGCTTTCCAGGAGACATGCTCCCTTCTGCTTGGTTCCATTCTCAATaGCCACAGCCAAGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: ALVRLRVARFPGDMLPSAWFHSQ*PQPRCQ
Trigger: CTGACACCTTGGCTGTGGTCATTGAGAATGGAACCA...AGCAGAAGGGAGCATGTCTCCTGGAAAGCGAGCAACCCTGAGTCTGACCAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR TCA 90 bp GATCTGGGCAAAGCTGCTCTGTTGCCCTTGGGCTTCAGGAACAACAAACAAGGCCCAGAAGAAGAAGGCTaGGCGGTGGTCTGCAGTCAT +
Preference number: 4 (lower is better)
Translates to: DLGKAALLPLGFRNNKQGPEEEG*AVVCSH
Trigger: ATGACTGCAGACCACCGCTCAGCCTTCTTCTTCTGG...GCCTTGTTTGTTGTTCCTGAAGCCCAAGGGCAACAGAGCAGCTTTGCCCAGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR TCA 90 bp CGAGAGCAGGCCAGCTTTCCAAGAGGCTTCCTTTTCACAGTTGGAATCTCTCCGCCAGAAGAAGAAGGCTaGGCGGTGGTCTGCAGTCAT +
Preference number: 4 (lower is better)
Translates to: REQASFPRGFLFTVGISPPEEEG*AVVCSH
Trigger: ATGACTGCAGACCACCGCTCAGCCTTCTTCTTCTGG...CGGAGAGATTCCAACTGTGAAAAGGAAGCCTCTTGGAAAGCTGGCCTGCTCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR GCA 90 bp CGAGAGCAGGCCAGCTTTCCAAGAGGCTTCCTTTTCACAGTTGGAATCTCTCCGCAGGGAAAGGAAAAATaGCACTGTGCGGCACCGGGA +
Preference number: 4 (lower is better)
Translates to: REQASFPRGFLFTVGISPQGKEK*HCAAPG
Trigger: TCCCGGTGCCGCACAGTGGCATTTTTCCTTTCCCTG...CGGAGAGATTCCAACTGTGAAAAGGAAGCCTCTTGGAAAGCTGGCCTGCTCTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR GCA 90 bp TTTCCATGGTGGCTGGGGTCATGGGACTGCTTTGGCTACAGAGCTATGGATGTGCAGGGAAAGGAAAAATaGCACTGTGCGGCACCGGGA +
Preference number: 4 (lower is better)
Translates to: FPWWLGSWDCFGYRAMDVQGKEK*HCAAPG
Trigger: TCCCGGTGCCGCACAGTGGCATTTTTCCTTTCCCTG...CACATCCATAGCTCTGTAGCCAAAGCAGTCCCATGACCCCAGCCACCATGGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR GCA 90 bp TGGTTTCCATGGTGGCTGGGGTCATGGGACTGCTTTGGCTACAGAGCTATGGATCAGGGAAAGGAAAAATaGCACTGTGCGGCACCGGGA +
Preference number: 4 (lower is better)
Translates to: WFPWWLGSWDCFGYRAMDQGKEK*HCAAPG
Trigger: TCCCGGTGCCGCACAGTGGCATTTTTCCTTTCCCTG...ATCCATAGCTCTGTAGCCAAAGCAGTCCCATGACCCCAGCCACCATGGAAACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR GCA 90 bp AGGAGACATGCTCCCTTCTGCTGTGGGGAAGCAGCTTCCAAGCCTCAGGTTCCAATATACAGACTGTGCTaGACATCCGGGGGATCCATC +
Preference number: 4 (lower is better)
Translates to: RRHAPFCCGEAASKPQVPIYRLC*TSGGSI
Trigger: GATGGATCCCCCGGATGTGCAGCACAGTCTGTATAT...TGGAACCTGAGGCTTGGAAGCTGCTTCCCCACAGCAGAAGGGAGCATGTCTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp CGAATCATCAGGGCGAGCAGTGAGGTCAGCATGAAGGCCGAGAGCAGGCCAGCTGGGTCTTCCTTAAAATaGCCATCTCGCCCAGTAATT +
Preference number: 4 (lower is better)
Translates to: RIIRASSEVSMKAESRPAGSSLK*PSRPVI
Trigger: AATTACTGGGCGAGATGGCCATTTTAAGGAAGACCC...AGCTGGCCTGCTCTCGGCCTTCATGCTGACCTCACTGCTCGCCCTGATGATTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp GGCGAAGGACTGACTCAGCGTACAGTCTGGAAATCCCTCGCACCCGGAGGCTCTGGGTCTTCCTTAAAATaGCCATCTCGCCCAGTAATT +
Preference number: 4 (lower is better)
Translates to: GEGLTQRTVWKSLAPGGSGSSLK*PSRPVI
Trigger: AATTACTGGGCGAGATGGCCATTTTAAGGAAGACCC...AGAGCCTCCGGGTGCGAGGGATTTCCAGACTGTACGCTGAGTCAGTCCTTCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp GCGTACAGTCTGGAAATCCCTCGCACCCGGAGGCTCTGGTCAGACTCAGGGTTGGGGTCTTCCTTAAAATaGCCATCTCGCCCAGTAATT +
Preference number: 4 (lower is better)
Translates to: AYSLEIPRTRRLWSDSGLGSSLK*PSRPVI
Trigger: AATTACTGGGCGAGATGGCCATTTTAAGGAAGACCC...CAACCCTGAGTCTGACCAGAGCCTCCGGGTGCGAGGGATTTCCAGACTGTACGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp GGTTTCCATGGTGGCTGGGGTCATGGGACTGCTTTGGCTACAGAGCTATGGATGCTGGCCAGCTTTCCCTaGGATATTCATCAGGTAGCG +
Preference number: 4 (lower is better)
Translates to: GFHGGWGHGTALATELWMLASFP*DIHQVA
Trigger: CGCTACCTGATGAATATCCCAGGGAAAGCTGGCCAG...CATCCATAGCTCTGTAGCCAAAGCAGTCCCATGACCCCAGCCACCATGGAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp CCCATCAGTGCAAATCGTTTATTGTGTTGGTTTCCATGGTGGCTGGGGTCATGGAGGCTTGGGAGGGGCTaGCTCCACAGGATAGACCCA +
Preference number: 4 (lower is better)
Translates to: PISANRLLCWFPWWLGSWRLGRG*LHRIDP
Trigger: TGGGTCTATCCTGTGGAGCCAGCCCCTCCCAAGCCT...CCATGACCCCAGCCACCATGGAAACCAACACAATAAACGATTTGCACTGATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp AGGAGACATGCTCCCTTCTGCTGTGGGGAAGCAGCTTCCAAGCCTCAGGTTCCAGTGCTCACAAGATCATaGAGGCCCCAGAAGAAGAAG +
Preference number: 4 (lower is better)
Translates to: RRHAPFCCGEAASKPQVPVLTRS*RPQKKK
Trigger: CTTCTTCTTCTGGGGCCTCCATGATCTTGTGAGCAC...TGGAACCTGAGGCTTGGAAGCTGCTTCCCCACAGCAGAAGGGAGCATGTCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp TTTCCATGGTGGCTGGGGTCATGGGACTGCTTTGGCTACAGAGCTATGGATGTGCCAGGCAGGGTCGGGTaGAACATATACAGACTGTGC +
Preference number: 4 (lower is better)
Translates to: FPWWLGSWDCFGYRAMDVPGRVG*NIYRLC
Trigger: GCACAGTCTGTATATGTTCCACCCGACCCTGCCTGG...CACATCCATAGCTCTGTAGCCAAAGCAGTCCCATGACCCCAGCCACCATGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp GTTTCCATGGTGGCTGGGGTCATGGGACTGCTTTGGCTACAGAGCTATGGATGTCCAGGCAGGGTCGGGTaGAACATATACAGACTGTGC +
Preference number: 4 (lower is better)
Translates to: VSMVAGVMGLLWLQSYGCPGRVG*NIYRLC
Trigger: GCACAGTCTGTATATGTTCCACCCGACCCTGCCTGG...ACATCCATAGCTCTGTAGCCAAAGCAGTCCCATGACCCCAGCCACCATGGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR TCA 90 bp TCTCCGTCTCCCTTCTGTCAGGGCCACGTGTATGCCAGGTTACCTTTACTCTGCCAGCACAGGATCTGGTaGGATTGTTACTGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: SPSPFCQGHVYARLPLLCQHRIW*DCYCCW
Trigger: CCAACAGCAGTAACAATCTCACCAGATCCTGTGCTG...GCAGAGTAAAGGTAACCTGGCATACACGTGGCCCTGACAGAAGGGAGACGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114988.8
CDS-3UTR TCA 90 bp CTTCAGGAACAACAAACAAGGCACAAGGTGAGACCGCCATCAGATAAGCACCAGAATAGAGAGCTCCACTaGCCTCCTGTCCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: LQEQQTRHKVRPPSDKHQNRELH*PPVPPG
Trigger: CCCAGGAGGGACAGGAGGTCAGTGGAGCTCTCTATT...CTGGTGCTTATCTGATGGCGGTCTCACCTTGTGCCTTGTTTGTTGTTCCTGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR TCA 90 bp CAGTGCAAATCGTTTATTGTGTTGGTTTCCATGGTGGCTGGGGTCATGGGACTGAATAGAGAGCTCCACTaGCCTCCTGTCCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: QCKSFIVLVSMVAGVMGLNRELH*PPVPPG
Trigger: CCCAGGAGGGACAGGAGGTCAGTGGAGCTCTCTATT...CAGTCCCATGACCCCAGCCACCATGGAAACCAACACAATAAACGATTTGCACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR TCA 90 bp GTTTCCATGGTGGCTGGGGTCATGGGACTGCTTTGGCTACAGAGCTATGGATGTGTACCCAGTGCTACCTaGATAGAGAGCTCCACTGAC +
Preference number: 4 (lower is better)
Translates to: VSMVAGVMGLLWLQSYGCVPSAT*IESSTD
Trigger: GTCAGTGGAGCTCTCTATTCAGGTAGCACTGGGTAC...ACATCCATAGCTCTGTAGCCAAAGCAGTCCCATGACCCCAGCCACCATGGAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR TCA 90 bp AGGCCAGCTTTCCAAGAGGCTTCCTTTTCACAGTTGGAATCTCTCCGTGTGCTCCCAGAAGAAGAAGGCTaGGCGGTGGTCTGCAGTCAT +
Preference number: 4 (lower is better)
Translates to: RPAFQEASFSQLESLRVLPEEEG*AVVCSH
Trigger: ATGACTGCAGACCACCGCTCAGCCTTCTTCTTCTGG...GAGCACACGGAGAGATTCCAACTGTGAAAAGGAAGCCTCTTGGAAAGCTGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR TCA 90 bp CAAGAGGCTTCCTTTTCACAGTTGGAATCTCTCCGTGTGCTCCAGCCGACAACACCAGAAGAAGAAGGCTaGGCGGTGGTCTGCAGTCAT +
Preference number: 4 (lower is better)
Translates to: QEASFSQLESLRVLQPTTPEEEG*AVVCSH
Trigger: ATGACTGCAGACCACCGCTCAGCCTTCTTCTTCTGG...TGTTGTCGGCTGGAGCACACGGAGAGATTCCAACTGTGAAAAGGAAGCCTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR GCA 90 bp ATCAGTGCAAATCGTTTATTGTGTTGGTTTCCATGGTGGCTGGGGTCATGGGACTCTCCCAGAGCACGCTaGCATTGGCTCCTGACACCG +
Preference number: 4 (lower is better)
Translates to: ISANRLLCWFPWWLGSWDSPRAR*HWLLTP
Trigger: CGGTGTCAGGAGCCAATGGCAGCGTGCTCTGGGAGA...GTCCCATGACCCCAGCCACCATGGAAACCAACACAATAAACGATTTGCACTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR GCA 90 bp TCATGGGACTGCTTTGGCTACAGAGCTATGGATGTGATCTGGGCAAAGCTGCTCCATCCACACCAAGGCTaGCTCTGTGGCCAATCTGGT +
Preference number: 4 (lower is better)
Translates to: SWDCFGYRAMDVIWAKLLHPHQG*LCGQSG
Trigger: ACCAGATTGGCCACAGAGGCAGCCTTGGTGTGGATG...GAGCAGCTTTGCCCAGATCACATCCATAGCTCTGTAGCCAAAGCAGTCCCATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR GCA 90 bp AGGCCAGCTTTCCAAGAGGCTTCCTTTTCACAGTTGGAATCTCTCCGTGTGCTCCATCCACACCAAGGCTaGCTCTGTGGCCAATCTGGT +
Preference number: 4 (lower is better)
Translates to: RPAFQEASFSQLESLRVLHPHQG*LCGQSG
Trigger: ACCAGATTGGCCACAGAGGCAGCCTTGGTGTGGATG...GAGCACACGGAGAGATTCCAACTGTGAAAAGGAAGCCTCTTGGAAAGCTGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR GCA 90 bp CCGAGAGCAGGCCAGCTTTCCAAGAGGCTTCCTTTTCACAGTTGGAATCTCTCCACTGCTCCAAGTCTGTaGAGAAGCCTCCTGTGGACA +
Preference number: 4 (lower is better)
Translates to: PRAGQLSKRLPFHSWNLSTAPSL*RSLLWT
Trigger: TGTCCACAGGAGGCTTCTGCACAGACTTGGAGCAGT...GGAGAGATTCCAACTGTGAAAAGGAAGCCTCTTGGAAAGCTGGCCTGCTCTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR GCA 90 bp CCCTTCTGTCAGGGCCACGTGTATGCCAGGTTACCTTTACTCTGCAGGGCTGAGCCTGGGACAAGGTCTTaGACTTTGTGTTTGGTGACA +
Preference number: 4 (lower is better)
Translates to: PFCQGHVYARLPLLCRAEPGTRS*TLCLVT
Trigger: TGTCACCAAACACAAAGTGCAAGACCTTGTCCCAGG...CTCAGCCCTGCAGAGTAAAGGTAACCTGGCATACACGTGGCCCTGACAGAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114988.8
CDS-3UTR CCA 90 bp CGAGAGCAGGCCAGCTTTCCAAGAGGCTTCCTTTTCACAGTTGGAATCTCTCCGCTAAAGCTGCTGGGATaGCTCCACAGGGTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: REQASFPRGFLFTVGISPLKLLG*LHRVSP
Trigger: AGGAGAAACCCTGTGGAGCCATCCCAGCAGCTTTAG...CGGAGAGATTCCAACTGTGAAAAGGAAGCCTCTTGGAAAGCTGGCCTGCTCTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp GAGCAGCACAGCACACAGTGGTGGCTTTCCTGGGAGAGGGTAAGGAGGCAGGAAGGGTCTTCCTTAAAATaGCCATCTCGCCCAGTAATT +
Preference number: 4 (lower is better)
Translates to: EQHSTQWWLSWERVRRQEGSSLK*PSRPVI
Trigger: AATTACTGGGCGAGATGGCCATTTTAAGGAAGACCC...TTCCTGCCTCCTTACCCTCTCCCAGGAAAGCCACCACTGTGTGCTGTGCTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp GATCTGGGCAAAGCTGCTCTGTTGCCCTTGGGCTTCAGGAACAACAAACAAGGCAAGAAGGCTGAGCGGTaGTCTGCAGTCATCAGGCTT +
Preference number: 4 (lower is better)
Translates to: DLGKAALLPLGFRNNKQGKKAER*SAVIRL
Trigger: AAGCCTGATGACTGCAGACCACCGCTCAGCCTTCTT...GCCTTGTTTGTTGTTCCTGAAGCCCAAGGGCAACAGAGCAGCTTTGCCCAGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp GTTTCCATGGTGGCTGGGGTCATGGGACTGCTTTGGCTACAGAGCTATGGATGTAAGAAGGCTGAGCGGTaGTCTGCAGTCATCAGGCTT +
Preference number: 4 (lower is better)
Translates to: VSMVAGVMGLLWLQSYGCKKAER*SAVIRL
Trigger: AAGCCTGATGACTGCAGACCACCGCTCAGCCTTCTT...ACATCCATAGCTCTGTAGCCAAAGCAGTCCCATGACCCCAGCCACCATGGAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp TACAGAGCTATGGATGTGATCTGGGCAAAGCTGCTCTGTTGCCCTTGGGCTTCACCAGGCAGGGTCGGGTaGAACATATACAGACTGTGC +
Preference number: 4 (lower is better)
Translates to: YRAMDVIWAKLLCCPWASPGRVG*NIYRLC
Trigger: GCACAGTCTGTATATGTTCCACCCGACCCTGCCTGG...TGAAGCCCAAGGGCAACAGAGCAGCTTTGCCCAGATCACATCCATAGCTCTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR CAA 72 bp ATACTCAGACCAAGCCCAGAAGCCCTCCAGGCTCTCTaGTGCTGTGGCAGCCAATGCTTACCTGACTTTCAT +
Preference number: 4 (lower is better)
Translates to: ILRPSPEALQAL*CCGSQCLPDFH
Trigger: ATGAAAGTCAGGTAAGCATTGGCTGCCACAGCACAAGAGAGCCTGGAGGGCTTCTGGGCTTGGTCTGAGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114988.8
CDS-3UTR TCA 90 bp CGCTTTCCAGGAGACATGCTCCCTTCTGCTGTGGGGAAGCAGCTTCCAAGCCTCTCCTGGGTTTTCCTGTaGTTTCTTGTCCTCATTCTT +
Preference number: 4 (lower is better)
Translates to: RFPGDMLPSAVGKQLPSLSWVFL*FLVLIL
Trigger: AAGAATGAGGACAAGAAATCACAGGAAAACCCAGGA...GAGGCTTGGAAGCTGCTTCCCCACAGCAGAAGGGAGCATGTCTCCTGGAAAGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR TCA 90 bp CCGAGAGCAGGCCAGCTTTCCAAGAGGCTTCCTTTTCACAGTTGGAATCTCTCCCAGCACAGGATCTGGTaGGATTGTTACTGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: PRAGQLSKRLPFHSWNLSQHRIW*DCYCCW
Trigger: CCAACAGCAGTAACAATCTCACCAGATCCTGTGCTG...GGAGAGATTCCAACTGTGAAAAGGAAGCCTCTTGGAAAGCTGGCCTGCTCTCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR GCA 90 bp TGCATGAGTGCAGCAGAGAACCAGAAACCTGTGAAAGAAGCTGTGGGTAGACAGCAGGGAAAGGAAAAATaGCACTGTGCGGCACCGGGA +
Preference number: 4 (lower is better)
Translates to: CMSAAENQKPVKEAVGRQQGKEK*HCAAPG
Trigger: TCCCGGTGCCGCACAGTGGCATTTTTCCTTTCCCTG...CTGTCTACCCACAGCTTCTTTCACAGGTTTCTGGTTCTCTGCTGCACTCATGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000114988.8
CDS-3UTR GCA 90 bp CAGTGCAAATCGTTTATTGTGTTGGTTTCCATGGTGGCTGGGGTCATGGGACTGCATCCACACCAAGGCTaGCTCTGTGGCCAATCTGGT +
Preference number: 4 (lower is better)
Translates to: QCKSFIVLVSMVAGVMGLHPHQG*LCGQSG
Trigger: ACCAGATTGGCCACAGAGGCAGCCTTGGTGTGGATG...CAGTCCCATGACCCCAGCCACCATGGAAACCAACACAATAAACGATTTGCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR GCA 90 bp AGGCCAGCTTTCCAAGAGGCTTCCTTTTCACAGTTGGAATCTCTCCGTGTGCTCACTGCTCCAAGTCTGTaGAGAAGCCTCCTGTGGACA +
Preference number: 4 (lower is better)
Translates to: RPAFQEASFSQLESLRVLTAPSL*RSLLWT
Trigger: TGTCCACAGGAGGCTTCTGCACAGACTTGGAGCAGT...GAGCACACGGAGAGATTCCAACTGTGAAAAGGAAGCCTCTTGGAAAGCTGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR GCA 90 bp GTTTCCATGGTGGCTGGGGTCATGGGACTGCTTTGGCTACAGAGCTATGGATGTCATCAGGTAGCGAACTaGTCCAAGTCTGTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: VSMVAGVMGLLWLQSYGCHQVAN*SKSVQK
Trigger: CTTCTGCACAGACTTGGAGCAGTTCGCTACCTGATG...ACATCCATAGCTCTGTAGCCAAAGCAGTCCCATGACCCCAGCCACCATGGAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR GCA 90 bp TTTCCATGGTGGCTGGGGTCATGGGACTGCTTTGGCTACAGAGCTATGGATGTGCATCAGGTAGCGAACTaGTCCAAGTCTGTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: FPWWLGSWDCFGYRAMDVHQVAN*SKSVQK
Trigger: CTTCTGCACAGACTTGGAGCAGTTCGCTACCTGATG...CACATCCATAGCTCTGTAGCCAAAGCAGTCCCATGACCCCAGCCACCATGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR GCA 90 bp TTTCCATGGTGGCTGGGGTCATGGGACTGCTTTGGCTACAGAGCTATGGATGTGATATACAGACTGTGCTaGACATCCGGGGGATCCATC +
Preference number: 4 (lower is better)
Translates to: FPWWLGSWDCFGYRAMDVIYRLC*TSGGSI
Trigger: GATGGATCCCCCGGATGTGCAGCACAGTCTGTATAT...CACATCCATAGCTCTGTAGCCAAAGCAGTCCCATGACCCCAGCCACCATGGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR GCA 90 bp GGTTTCCATGGTGGCTGGGGTCATGGGACTGCTTTGGCTACAGAGCTATGGATGCCTGGGACAAGGTCTTaGACTTTGTGTTTGGTGACA +
Preference number: 4 (lower is better)
Translates to: GFHGGWGHGTALATELWMPGTRS*TLCLVT
Trigger: TGTCACCAAACACAAAGTGCAAGACCTTGTCCCAGG...CATCCATAGCTCTGTAGCCAAAGCAGTCCCATGACCCCAGCCACCATGGAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp CAAGAGGCTTCCTTTTCACAGTTGGAATCTCTCCGTGTGCTCCAGCCGACAACAGGGACGGTCTGGACATaGGATGATGAAAGACAGGAC +
Preference number: 4 (lower is better)
Translates to: QEASFSQLESLRVLQPTTGTVWT*DDERQD
Trigger: GTCCTGTCTTTCATCATCCCATGTCCAGACCGTCCC...TGTTGTCGGCTGGAGCACACGGAGAGATTCCAACTGTGAAAAGGAAGCCTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp CTTCAGGAACAACAAACAAGGCACAAGGTGAGACCGCCATCAGATAAGCACCAGTCAATGTCAGGCACCTaGAGCAGAGGGCTCAGGATG +
Preference number: 4 (lower is better)
Translates to: LQEQQTRHKVRPPSDKHQSMSGT*SRGLRM
Trigger: CATCCTGAGCCCTCTGCTCCAGGTGCCTGACATTGA...CTGGTGCTTATCTGATGGCGGTCTCACCTTGTGCCTTGTTTGTTGTTCCTGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp TCATGGGACTGCTTTGGCTACAGAGCTATGGATGTGATCTGGGCAAAGCTGCTCCTGGCCAGCTTTCCCTaGGATATTCATCAGGTAGCG +
Preference number: 4 (lower is better)
Translates to: SWDCFGYRAMDVIWAKLLLASFP*DIHQVA
Trigger: CGCTACCTGATGAATATCCCAGGGAAAGCTGGCCAG...GAGCAGCTTTGCCCAGATCACATCCATAGCTCTGTAGCCAAAGCAGTCCCATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp AGGCCAGCTTTCCAAGAGGCTTCCTTTTCACAGTTGGAATCTCTCCGTGTGCTCCTGGCCAGCTTTCCCTaGGATATTCATCAGGTAGCG +
Preference number: 4 (lower is better)
Translates to: RPAFQEASFSQLESLRVLLASFP*DIHQVA
Trigger: CGCTACCTGATGAATATCCCAGGGAAAGCTGGCCAG...GAGCACACGGAGAGATTCCAACTGTGAAAAGGAAGCCTCTTGGAAAGCTGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp CCGAGAGCAGGCCAGCTTTCCAAGAGGCTTCCTTTTCACAGTTGGAATCTCTCCGTGCTCACAAGATCATaGAGGCCCCAGAAGAAGAAG +
Preference number: 4 (lower is better)
Translates to: PRAGQLSKRLPFHSWNLSVLTRS*RPQKKK
Trigger: CTTCTTCTTCTGGGGCCTCCATGATCTTGTGAGCAC...GGAGAGATTCCAACTGTGAAAAGGAAGCCTCTTGGAAAGCTGGCCTGCTCTCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp CGAGAGCAGGCCAGCTTTCCAAGAGGCTTCCTTTTCACAGTTGGAATCTCTCCGGTGCTCACAAGATCATaGAGGCCCCAGAAGAAGAAG +
Preference number: 4 (lower is better)
Translates to: REQASFPRGFLFTVGISPVLTRS*RPQKKK
Trigger: CTTCTTCTTCTGGGGCCTCCATGATCTTGTGAGCAC...CGGAGAGATTCCAACTGTGAAAAGGAAGCCTCTTGGAAAGCTGGCCTGCTCTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR TCA 90 bp AGGCCAGCTTTCCAAGAGGCTTCCTTTTCACAGTTGGAATCTCTCCGTGTGCTCCAGCACAGGATCTGGTaGGATTGTTACTGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: RPAFQEASFSQLESLRVLQHRIW*DCYCCW
Trigger: CCAACAGCAGTAACAATCTCACCAGATCCTGTGCTG...GAGCACACGGAGAGATTCCAACTGTGAAAAGGAAGCCTCTTGGAAAGCTGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR TCA 90 bp CAGTGCAAATCGTTTATTGTGTTGGTTTCCATGGTGGCTGGGGTCATGGGACTGGTACCCAGTGCTACCTaGATAGAGAGCTCCACTGAC +
Preference number: 4 (lower is better)
Translates to: QCKSFIVLVSMVAGVMGLVPSAT*IESSTD
Trigger: GTCAGTGGAGCTCTCTATTCAGGTAGCACTGGGTAC...CAGTCCCATGACCCCAGCCACCATGGAAACCAACACAATAAACGATTTGCACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR TCA 90 bp TCATGGGACTGCTTTGGCTACAGAGCTATGGATGTGATCTGGGCAAAGCTGCTCTGGTTCCATTCTCAATaGCCACAGCCAAGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: SWDCFGYRAMDVIWAKLLWFHSQ*PQPRCQ
Trigger: CTGACACCTTGGCTGTGGTCATTGAGAATGGAACCA...GAGCAGCTTTGCCCAGATCACATCCATAGCTCTGTAGCCAAAGCAGTCCCATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR TCA 90 bp AGGCCAGCTTTCCAAGAGGCTTCCTTTTCACAGTTGGAATCTCTCCGTGTGCTCTGGTTCCATTCTCAATaGCCACAGCCAAGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: RPAFQEASFSQLESLRVLWFHSQ*PQPRCQ
Trigger: CTGACACCTTGGCTGTGGTCATTGAGAATGGAACCA...GAGCACACGGAGAGATTCCAACTGTGAAAAGGAAGCCTCTTGGAAAGCTGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR GCA 90 bp CTTCAGGAACAACAAACAAGGCACAAGGTGAGACCGCCATCAGATAAGCACCAGACTGCTCCAAGTCTGTaGAGAAGCCTCCTGTGGACA +
Preference number: 4 (lower is better)
Translates to: LQEQQTRHKVRPPSDKHQTAPSL*RSLLWT
Trigger: TGTCCACAGGAGGCTTCTGCACAGACTTGGAGCAGT...CTGGTGCTTATCTGATGGCGGTCTCACCTTGTGCCTTGTTTGTTGTTCCTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR GCA 90 bp TCATGGGACTGCTTTGGCTACAGAGCTATGGATGTGATCTGGGCAAAGCTGCTCATATACAGACTGTGCTaGACATCCGGGGGATCCATC +
Preference number: 4 (lower is better)
Translates to: SWDCFGYRAMDVIWAKLLIYRLC*TSGGSI
Trigger: GATGGATCCCCCGGATGTGCAGCACAGTCTGTATAT...GAGCAGCTTTGCCCAGATCACATCCATAGCTCTGTAGCCAAAGCAGTCCCATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR GCA 90 bp TGGTTTCCATGGTGGCTGGGGTCATGGGACTGCTTTGGCTACAGAGCTATGGATATATACAGACTGTGCTaGACATCCGGGGGATCAAGA +
Preference number: 4 (lower is better)
Translates to: WFPWWLGSWDCFGYRAMDIYRLC*TSGGSR
Trigger: TCTTGATCCCCCGGATGTGCAGCACAGTCTGTATAT...ATCCATAGCTCTGTAGCCAAAGCAGTCCCATGACCCCAGCCACCATGGAAACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000141240.3
CDS-3UTR CCA 90 bp CCCATCAGTGCAAATCGTTTATTGTGTTGGTTTCCATGGTGGCTGGGGTCATGGGGGACGGTCTGGACATaGGATGATGAAAGACAGGAC +
Preference number: 4 (lower is better)
Translates to: PISANRLLCWFPWWLGSWGTVWT*DDERQD
Trigger: GTCCTGTCTTTCATCATCCCATGTCCAGACCGTCCC...CCATGACCCCAGCCACCATGGAAACCAACACAATAAACGATTTGCACTGATGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp CTTCAGGAACAACAAACAAGGCACAAGGTGAGACCGCCATCAGATAAGCACCAGCCTCTGTGGCCAATCTaGTACCCAGTGCTACCTGAA +
Preference number: 4 (lower is better)
Translates to: LQEQQTRHKVRPPSDKHQPLWPI*YPVLPE
Trigger: TTCAGGTAGCACTGGGTACCAGATTGGCCACAGAGG...CTGGTGCTTATCTGATGGCGGTCTCACCTTGTGCCTTGTTTGTTGTTCCTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp TCATGGGACTGCTTTGGCTACAGAGCTATGGATGTGATCTGGGCAAAGCTGCTCGTGCTCACAAGATCATaGAGGCCCCAGAAGAAGAAG +
Preference number: 4 (lower is better)
Translates to: SWDCFGYRAMDVIWAKLLVLTRS*RPQKKK
Trigger: CTTCTTCTTCTGGGGCCTCCATGATCTTGTGAGCAC...GAGCAGCTTTGCCCAGATCACATCCATAGCTCTGTAGCCAAAGCAGTCCCATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR CAA 72 bp CAGAGCTATGGATGTGATCTGGGCAAAGCTGCTCTGTaGCCCTTGGGCTTCAGGAACAACAAACAAGGCACA +
Preference number: 4 (lower is better)
Translates to: QSYGCDLGKAAL*PLGFRNNKQGT
Trigger: TGTGCCTTGTTTGTTGTTCCTGAAGCCCAAGGGCAACAGAGCAGCTTTGCCCAGATCACATCCATAGCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR TCA 90 bp GTCCACTTTGTGCTGATGAGTGACCCAGCCCCCATCTCAGGCTTCAGTGGTGTTTCCTGGGTTTTCCTGTaGTTTCTTGTCCTCATTCTT +
Preference number: 4 (lower is better)
Translates to: VHFVLMSDPAPISGFSGVSWVFL*FLVLIL
Trigger: AAGAATGAGGACAAGAAATCACAGGAAAACCCAGGA...AACACCACTGAAGCCTGAGATGGGGGCTGGGTCACTCATCAGCACAAAGTGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000114988.8
CDS-3UTR TCA 90 bp ATCAGTGCAAATCGTTTATTGTGTTGGTTTCCATGGTGGCTGGGGTCATGGGACGTACCCAGTGCTACCTaGATAGAGAGCTCCACTGAC +
Preference number: 4 (lower is better)
Translates to: ISANRLLCWFPWWLGSWDVPSAT*IESSTD
Trigger: GTCAGTGGAGCTCTCTATTCAGGTAGCACTGGGTAC...GTCCCATGACCCCAGCCACCATGGAAACCAACACAATAAACGATTTGCACTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR TCA 90 bp CAGTGCAAATCGTTTATTGTGTTGGTTTCCATGGTGGCTGGGGTCATGGGACTGTGGTTCCATTCTCAATaGCCACAGCCAAGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: QCKSFIVLVSMVAGVMGLWFHSQ*PQPRCQ
Trigger: CTGACACCTTGGCTGTGGTCATTGAGAATGGAACCA...CAGTCCCATGACCCCAGCCACCATGGAAACCAACACAATAAACGATTTGCACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR GCA 90 bp CCCATCAGTGCAAATCGTTTATTGTGTTGGTTTCCATGGTGGCTGGGGTCATGGCATCAGGTAGCGAACTaGTCCAAGTCTGTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: PISANRLLCWFPWWLGSWHQVAN*SKSVQK
Trigger: CTTCTGCACAGACTTGGAGCAGTTCGCTACCTGATG...CCATGACCCCAGCCACCATGGAAACCAACACAATAAACGATTTGCACTGATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR GCA 90 bp TCATGGGACTGCTTTGGCTACAGAGCTATGGATGTGATCTGGGCAAAGCTGCTCCCTGGGACAAGGTCTTaGACTTTGTGTTTGGTGACA +
Preference number: 4 (lower is better)
Translates to: SWDCFGYRAMDVIWAKLLPGTRS*TLCLVT
Trigger: TGTCACCAAACACAAAGTGCAAGACCTTGTCCCAGG...GAGCAGCTTTGCCCAGATCACATCCATAGCTCTGTAGCCAAAGCAGTCCCATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp CGAGAGCAGGCCAGCTTTCCAAGAGGCTTCCTTTTCACAGTTGGAATCTCTCCGGGGTCTTCCTTAAAATaGCCATCTCGCCCAGTAATT +
Preference number: 4 (lower is better)
Translates to: REQASFPRGFLFTVGISPGSSLK*PSRPVI
Trigger: AATTACTGGGCGAGATGGCCATTTTAAGGAAGACCC...CGGAGAGATTCCAACTGTGAAAAGGAAGCCTCTTGGAAAGCTGGCCTGCTCTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp TTTCCATGGTGGCTGGGGTCATGGGACTGCTTTGGCTACAGAGCTATGGATGTGGGGTCTTCCTTAAAATaGCCATCTCGCCCAGTAATT +
Preference number: 4 (lower is better)
Translates to: FPWWLGSWDCFGYRAMDVGSSLK*PSRPVI
Trigger: AATTACTGGGCGAGATGGCCATTTTAAGGAAGACCC...CACATCCATAGCTCTGTAGCCAAAGCAGTCCCATGACCCCAGCCACCATGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp ATCAGTGCAAATCGTTTATTGTGTTGGTTTCCATGGTGGCTGGGGTCATGGGACAAGAAGGCTGAGCGGTaGTCTGCAGTCATCAGGCTT +
Preference number: 4 (lower is better)
Translates to: ISANRLLCWFPWWLGSWDKKAER*SAVIRL
Trigger: AAGCCTGATGACTGCAGACCACCGCTCAGCCTTCTT...GTCCCATGACCCCAGCCACCATGGAAACCAACACAATAAACGATTTGCACTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CCA 90 bp CAAATCGTTTATTGTGTTGGTTTCCATGGTGGCTGGGGTCATGGGACTGCTTTGGGGGGATCAAGATCATaGAGGCCCCAGAAGAAGAAG +
Preference number: 4 (lower is better)
Translates to: QIVYCVGFHGGWGHGTALGGSRS*RPQKKK
Trigger: CTTCTTCTTCTGGGGCCTCCATGATCTTGATCCCCC...CAAAGCAGTCCCATGACCCCAGCCACCATGGAAACCAACACAATAAACGATTTG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000141240.3
CDS-3UTR TCA 90 bp GATCTGGGCAAAGCTGCTCTGTTGCCCTTGGGCTTCAGGAACAACAAACAAGGCTCCTGGGTTTTCCTGTaGTTTCTTGTCCTCATTCTT +
Preference number: 4 (lower is better)
Translates to: DLGKAALLPLGFRNNKQGSWVFL*FLVLIL
Trigger: AAGAATGAGGACAAGAAATCACAGGAAAACCCAGGA...GCCTTGTTTGTTGTTCCTGAAGCCCAAGGGCAACAGAGCAGCTTTGCCCAGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR TCA 90 bp ATCAGTGCAAATCGTTTATTGTGTTGGTTTCCATGGTGGCTGGGGTCATGGGACTGGTTCCATTCTCAATaGCCACAGCCAAGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: ISANRLLCWFPWWLGSWDWFHSQ*PQPRCQ
Trigger: CTGACACCTTGGCTGTGGTCATTGAGAATGGAACCA...GTCCCATGACCCCAGCCACCATGGAAACCAACACAATAAACGATTTGCACTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR TCA 90 bp ATCTCATCCTGGCATTGGAGAGAGAGACTCCTGAAATCTGAAGATAACCCTCTCTGGTTCCATTCTCAATaGCCACAGCCAAGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: ISSWHWRERLLKSEDNPLWFHSQ*PQPRCQ
Trigger: CTGACACCTTGGCTGTGGTCATTGAGAATGGAACCA...GAGAGGGTTATCTTCAGATTTCAGGAGTCTCTCTCTCCAATGCCAGGATGAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114988.8
CDS-3UTR CCA 90 bp CAAATCGTTTATTGTGTTGGTTTCCATGGTGGCTGGGGTCATGGGACTGCTTTGGGGTCTTCCTTAAAATaGCCATCTCGCCCAGTAATT +
Preference number: 4 (lower is better)
Translates to: QIVYCVGFHGGWGHGTALGSSLK*PSRPVI
Trigger: AATTACTGGGCGAGATGGCCATTTTAAGGAAGACCC...CAAAGCAGTCCCATGACCCCAGCCACCATGGAAACCAACACAATAAACGATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
3UTR CAA 72 bp GCTGTGGCAGCCAATGCTTACCTGACTTTCATTTCATaGCATTCCATAGTAGATCCCAGAGTATATGACTTA +
Preference number: 4 (lower is better)
Translates to: AVAANAYLTFIS*HSIVDPRVYDL
Trigger: TAAGTCATATACTCTGGGATCTACTATGGAATGCAATGAAATGAAAGTCAGGTAAGCATTGGCTGCCACAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114988.8
CDS CCA 90 bp GTCTGCAGTCATCAGGCTTGTGGATGGTGGGCCCCCAGGCAGGCTTaGGAGGGGCTGGCTCCACAGGATAGACCCAGTACTGAGGTCCAG +
Preference number: 5 (lower is better)
Translates to: VCSHQACGWWAPRQA*EGLAPQDRPSTEVQ
Trigger: CTGGACCTCAGTACTGGGTCTATCCTGTGGAGCCAGCCCCTCCCAAGCCTGCCTGGGGGCCCACCATCCACAAGCCTGATGACTGCAGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CAA 90 bp CCCTCGCACCCGGAGGCTCTGGTCAGACTCAGGGTTGCTCGCTTTCCAGGAGACTACAAGGGCGACATCTaGGGCCACGGGTCTCTCCCA +
Preference number: 5 (lower is better)
Translates to: PSHPEALVRLRVARFPGDYKGDI*GHGSLP
Trigger: TGGGAGAGACCCGTGGCCCAAGATGTCGCCCTTGTA...GTCTCCTGGAAAGCGAGCAACCCTGAGTCTGACCAGAGCCTCCGGGTGCGAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS TCA 90 bp CACATCCGGGGGATCAAGATCATGGAGGCCCCAGAAGAAGAAGGCTaGGCGGTGGTCTGCAGTCATCAGGCTTGTGGATGGTGGGCCCCC +
Preference number: 5 (lower is better)
Translates to: HIRGIKIMEAPEEEG*AVVCSHQACGWWAP
Trigger: GGGGGCCCACCATCCACAAGCCTGATGACTGCAGACCACCGCTCAGCCTTCTTCTTCTGGGGCCTCCATGATCTTGATCCCCCGGATGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000141240.3
CDS CCA 90 bp GGGCGACATCTTGGGCCACGGGTCTCTCCCAGAGCACGCTGCCATTaGCTCCTGACACCGCAACCACAAAGGCACAAGGAGTGGAAAAGC +
Preference number: 5 (lower is better)
Translates to: GRHLGPRVSPRARCH*LLTPQPQRHKEWKS
Trigger: GCTTTTCCACTCCTTGTGCCTTTGTGGTTGCGGTGTCAGGAGCCAATGGCAGCGTGCTCTGGGAGAGACCCGTGGCCCAAGATGTCGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS CCA 90 bp ATCAGGCTTGTGGATGGTGGGCCCCCAGGCAGGCTTGGGAGGGGCTaGCTCCACAGGATAGACCCAGTACTGAGGTCCAGAAGTAGGATC +
Preference number: 5 (lower is better)
Translates to: IRLVDGGPPGRLGRG*LHRIDPVLRSRSRI
Trigger: GATCCTACTTCTGGACCTCAGTACTGGGTCTATCCTGTGGAGCCAGCCCCTCCCAAGCCTGCCTGGGGGCCCACCATCCACAAGCCTGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS GCA 90 bp TTACAAGGGCGACATCTTGGGCCACGGGTCTCTCCCAGAGCACGCTaGCATTGGCTCCTGACACCGCAACCACAAAGGCACAAGGAGTGG +
Preference number: 5 (lower is better)
Translates to: LQGRHLGPRVSPRAR*HWLLTPQPQRHKEW
Trigger: CCACTCCTTGTGCCTTTGTGGTTGCGGTGTCAGGAGCCAATGGCAGCGTGCTCTGGGAGAGACCCGTGGCCCAAGATGTCGCCCTTGTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS CCA 90 bp CTGTCCAGTGTCTGTGGCATGGCACACTTTACAAGGGCGACATCTTaGGCCACGGGTCTCTCCCAGAGCACGCTGCCATTGGCTCCTGAC +
Preference number: 5 (lower is better)
Translates to: LSSVCGMAHFTRATS*ATGLSQSTLPLAPD
Trigger: GTCAGGAGCCAATGGCAGCGTGCTCTGGGAGAGACCCGTGGCCCAAGATGTCGCCCTTGTAAAGTGTGCCATGCCACAGACACTGGACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS CCA 90 bp AGCTCCACTGACCTCCTGTCCCTCCTGGGCGAGGATCAGGAGGTCTaGAGTACCGTCACCATCACCATCAATGTCAGGCACCTGGAGCAG +
Preference number: 5 (lower is better)
Translates to: SSTDLLSLLGEDQEV*STVTITINVRHLEQ
Trigger: CTGCTCCAGGTGCCTGACATTGATGGTGATGGTGACGGTACTCCAGACCTCCTGATCCTCGCCCAGGAGGGACAGGAGGTCAGTGGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CAA 90 bp ATCAGGGCGAGCAGTGAGGTCAGCATGAAGGCCGAGAGCAGGCCAGCTTTCCAATACAAGGGCGACATCTaGGGCCACGGGTCTCTCCCA +
Preference number: 5 (lower is better)
Translates to: IRASSEVSMKAESRPAFQYKGDI*GHGSLP
Trigger: TGGGAGAGACCCGTGGCCCAAGATGTCGCCCTTGTA...TTGGAAAGCTGGCCTGCTCTCGGCCTTCATGCTGACCTCACTGCTCGCCCTGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CAA 90 bp GAGCAGCACAGCACACAGTGGTGGCTTTCCTGGGAGAGGGTAAGGAGGCAGGAATACAAGGGCGACATCTaGGGCCACGGGTCTCTCCCA +
Preference number: 5 (lower is better)
Translates to: EQHSTQWWLSWERVRRQEYKGDI*GHGSLP
Trigger: TGGGAGAGACCCGTGGCCCAAGATGTCGCCCTTGTA...TTCCTGCCTCCTTACCCTCTCCCAGGAAAGCCACCACTGTGTGCTGTGCTGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CAA 90 bp GGCCTGAGAGGGACTAGGGAGCAGCACAGCACACAGTGGTGGCTTTCCTGGGAGAGCCACAGAGGGCACTaGCACAGGGCAGGAGAATAT +
Preference number: 5 (lower is better)
Translates to: GLRGTREQHSTQWWLSWESHRGH*HRAGEY
Trigger: ATATTCTCCTGCCCTGTGCAAGTGCCCTCTGTGGCT...CTCCCAGGAAAGCCACCACTGTGTGCTGTGCTGCTCCCTAGTCCCTCTCAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS TCA 90 bp CACACCAAGGCTGCCTCTGTGGCCAATCTGGTACCCAGTGCTACCTaGATAGAGAGCTCCACTGACCTCCTGTCCCTCCTGGGCGAGGAT +
Preference number: 5 (lower is better)
Translates to: HTKAASVANLVPSAT*IESSTDLLSLLGED
Trigger: ATCCTCGCCCAGGAGGGACAGGAGGTCAGTGGAGCTCTCTATTCAGGTAGCACTGGGTACCAGATTGGCCACAGAGGCAGCCTTGGTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS CCA 90 bp GCAGACACGTTGGCTAGCTCCAGCAGGATGCCAGGCAGGGTCGGGTaGAACATATACAGACTGTGCTGCACATCCGGGGGATCCATCTCA +
Preference number: 5 (lower is better)
Translates to: ADTLASSSRMPGRVG*NIYRLCCTSGGSIS
Trigger: TGAGATGGATCCCCCGGATGTGCAGCACAGTCTGTATATGTTCCACCCGACCCTGCCTGGCATCCTGCTGGAGCTAGCCAACGTGTCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS CCA 90 bp ATCTCACTCCGGTACCGTAGTCGGGAGAACCGGTCCCGGATAGCCTaGTCGCTGTCTGAGCTGCCTTCACCCAAGTGGATCACTCTACTG +
Preference number: 5 (lower is better)
Translates to: ISLRYRSRENRSRIA*SLSELPSPKWITLL
Trigger: CAGTAGAGTGATCCACTTGGGTGAAGGCAGCTCAGACAGCGACCAGGCTATCCGGGACCGGTTCTCCCGACTACGGTACCGGAGTGAGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CAA 90 bp ATCCCTCGCACCCGGAGGCTCTGGTCAGACTCAGGGTTGCTCGCTTTCCAGGAGGCCTGGGACAAGGTCTaGCACTTTGTGTTTGGTGAC +
Preference number: 5 (lower is better)
Translates to: IPRTRRLWSDSGLLAFQEAWDKV*HFVFGD
Trigger: GTCACCAAACACAAAGTGCAAGACCTTGTCCCAGGC...CTCCTGGAAAGCGAGCAACCCTGAGTCTGACCAGAGCCTCCGGGTGCGAGGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS TCA 90 bp ATCTTGGGCCACGGGTCTCTCCCAGAGCACGCTGCCATTGGCTCCTaGCACCGCAACCACAAAGGCACAAGGAGTGGAAAAGCCTTCATC +
Preference number: 5 (lower is better)
Translates to: ILGHGSLPEHAAIGS*HRNHKGTRSGKAFI
Trigger: GATGAAGGCTTTTCCACTCCTTGTGCCTTTGTGGTTGCGGTGTCAGGAGCCAATGGCAGCGTGCTCTGGGAGAGACCCGTGGCCCAAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS TCA 90 bp TGTGGCCAATCTGGTACCCAGTGCTACCTGAATAGAGAGCTCCACTaGCCTCCTGTCCCTCCTGGGCGAGGATCAGGAGGTCTGGAGTAC +
Preference number: 5 (lower is better)
Translates to: CGQSGTQCYLNRELH*PPVPPGRGSGGLEY
Trigger: GTACTCCAGACCTCCTGATCCTCGCCCAGGAGGGACAGGAGGTCAGTGGAGCTCTCTATTCAGGTAGCACTGGGTACCAGATTGGCCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS TCA 90 bp CTCATTAGTGCTCACAAGATCATGGAGGCCCCAGAAGAAGAAGGCTaGGCGGTGGTCTGCAGTCATCAGGCTTGTGGATGGTGGGCCCCC +
Preference number: 5 (lower is better)
Translates to: LISAHKIMEAPEEEG*AVVCSHQACGWWAP
Trigger: GGGGGCCCACCATCCACAAGCCTGATGACTGCAGACCACCGCTCAGCCTTCTTCTTCTGGGGCCTCCATGATCTTGTGAGCACTAATGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS GCA 90 bp CAGGACAAACACCACGAAGAGGCAGGTGAACAGGGAAAGGAAAAATaGCACTGTGCGGCACCGGGACAAGCGGGAAGGCACAGGCTTGCT +
Preference number: 5 (lower is better)
Translates to: QDKHHEEAGEQGKEK*HCAAPGQAGRHRLA
Trigger: AGCAAGCCTGTGCCTTCCCGCTTGTCCCGGTGCCGCACAGTGGCATTTTTCCTTTCCCTGTTCACCTGCCTCTTCGTGGTGTTTGTCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000151293.2
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS GCA 90 bp TCCAGCAGGATGCCAGGCAGGGTCGGGTGGAACATATACAGACTGTaGTGCACATCCGGGGGATCAAGATCATGGAGGCCCCAGAAGAAG +
Preference number: 5 (lower is better)
Translates to: SSRMPGRVGWNIYRL*CTSGGSRSWRPQKK
Trigger: CTTCTTCTGGGGCCTCCATGATCTTGATCCCCCGGATGTGCAGCACAGTCTGTATATGTTCCACCCGACCCTGCCTGGCATCCTGCTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000141240.3
CDS CCA 90 bp CGATACAGGCAGAAGACACCTCGTCACTGTCCAGTGTCTGTGGCATaGCACACTTTACAAGGGCGACATCTTGGGCCACGGGTCTCTCCC +
Preference number: 5 (lower is better)
Translates to: RYRQKTPRHCPVSVA*HTLQGRHLGPRVSP
Trigger: GGGAGAGACCCGTGGCCCAAGATGTCGCCCTTGTAAAGTGTGCCATGCCACAGACACTGGACAGTGACGAGGTGTCTTCTGCCTGTATCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS CCA 90 bp GCAGACACGTTGGCTAGCTCCAGCAGGATGCCAGGCAGGGTCGGGTaGAACATATACAGACTGTGCTGCACATCCGGGGGATCAAGATCA +
Preference number: 5 (lower is better)
Translates to: ADTLASSSRMPGRVG*NIYRLCCTSGGSRS
Trigger: TGATCTTGATCCCCCGGATGTGCAGCACAGTCTGTATATGTTCCACCCGACCCTGCCTGGCATCCTGCTGGAGCTAGCCAACGTGTCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000141240.3
CDS-3UTR CAA 90 bp GCGTACAGTCTGGAAATCCCTCGCACCCGGAGGCTCTGGTCAGACTCAGGGTTGCGGGAAGGCACAGGCTaGCTCTTCAAGTTATCTTCG +
Preference number: 5 (lower is better)
Translates to: AYSLEIPRTRRLWSDSGLREGTG*LFKLSS
Trigger: CGAAGATAACTTGAAGAGCAAGCCTGTGCCTTCCCG...CAACCCTGAGTCTGACCAGAGCCTCCGGGTGCGAGGGATTTCCAGACTGTACGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CAA 90 bp GGTTTCCATGGTGGCTGGGGTCATGGGACTGCTTTGGCTACAGAGCTATGGATGTACAAGGGCGACATCTaGGGCCACGGGTCTCTCCCA +
Preference number: 5 (lower is better)
Translates to: GFHGGWGHGTALATELWMYKGDI*GHGSLP
Trigger: TGGGAGAGACCCGTGGCCCAAGATGTCGCCCTTGTA...CATCCATAGCTCTGTAGCCAAAGCAGTCCCATGACCCCAGCCACCATGGAAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CAA 90 bp ATCAGGGCGAGCAGTGAGGTCAGCATGAAGGCCGAGAGCAGGCCAGCTTTCCAAAGCCACAGAGGGCACTaGCACAGGGCAGGAGAATAT +
Preference number: 5 (lower is better)
Translates to: IRASSEVSMKAESRPAFQSHRGH*HRAGEY
Trigger: ATATTCTCCTGCCCTGTGCAAGTGCCCTCTGTGGCT...TTGGAAAGCTGGCCTGCTCTCGGCCTTCATGCTGACCTCACTGCTCGCCCTGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CAA 90 bp GTTTCCATGGTGGCTGGGGTCATGGGACTGCTTTGGCTACAGAGCTATGGATGTCAGGCACATCTGAGCTaGCTGGGCCCGTCAGGAGCA +
Preference number: 5 (lower is better)
Translates to: VSMVAGVMGLLWLQSYGCQAHLS*LGPSGA
Trigger: TGCTCCTGACGGGCCCAGCAAGCTCAGATGTGCCTG...ACATCCATAGCTCTGTAGCCAAAGCAGTCCCATGACCCCAGCCACCATGGAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CAA 90 bp TTTCCATGGTGGCTGGGGTCATGGGACTGCTTTGGCTACAGAGCTATGGATGTGCAGGCACATCTGAGCTaGCTGGGCCCGTCAGGAGCA +
Preference number: 5 (lower is better)
Translates to: FPWWLGSWDCFGYRAMDVQAHLS*LGPSGA
Trigger: TGCTCCTGACGGGCCCAGCAAGCTCAGATGTGCCTG...CACATCCATAGCTCTGTAGCCAAAGCAGTCCCATGACCCCAGCCACCATGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CAA 90 bp TGGTTTCCATGGTGGCTGGGGTCATGGGACTGCTTTGGCTACAGAGCTATGGATCAGGCACATCTGAGCTaGCTGGGCCCGTCAGGAGCA +
Preference number: 5 (lower is better)
Translates to: WFPWWLGSWDCFGYRAMDQAHLS*LGPSGA
Trigger: TGCTCCTGACGGGCCCAGCAAGCTCAGATGTGCCTG...ATCCATAGCTCTGTAGCCAAAGCAGTCCCATGACCCCAGCCACCATGGAAACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CAA 90 bp ATCCCTCGCACCCGGAGGCTCTGGTCAGACTCAGGGTTGCTCGCTTTCCAGGAGTCTTGCACTTTGTGTTaGGTGACAGAGACCAGGCCA +
Preference number: 5 (lower is better)
Translates to: IPRTRRLWSDSGLLAFQESCTLC*VTETRP
Trigger: TGGCCTGGTCTCTGTCACCAAACACAAAGTGCAAGA...CTCCTGGAAAGCGAGCAACCCTGAGTCTGACCAGAGCCTCCGGGTGCGAGGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CAA 90 bp CGAATCATCAGGGCGAGCAGTGAGGTCAGCATGAAGGCCGAGAGCAGGCCAGCTGCCTGGGACAAGGTCTaGCACTTTGTGTTTGGTGAC +
Preference number: 5 (lower is better)
Translates to: RIIRASSEVSMKAESRPAAWDKV*HFVFGD
Trigger: GTCACCAAACACAAAGTGCAAGACCTTGTCCCAGGC...AGCTGGCCTGCTCTCGGCCTTCATGCTGACCTCACTGCTCGCCCTGATGATTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CAA 90 bp GGCGAAGGACTGACTCAGCGTACAGTCTGGAAATCCCTCGCACCCGGAGGCTCTGCCTGGGACAAGGTCTaGCACTTTGTGTTTGGTGAC +
Preference number: 5 (lower is better)
Translates to: GEGLTQRTVWKSLAPGGSAWDKV*HFVFGD
Trigger: GTCACCAAACACAAAGTGCAAGACCTTGTCCCAGGC...AGAGCCTCCGGGTGCGAGGGATTTCCAGACTGTACGCTGAGTCAGTCCTTCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS GCA 90 bp CAAAGGCCACGATGTTGGCAGACACGTTGGCTAGCTCCAGCAGGATaGCAGGCAGGGTCGGGTGGAACATATACAGACTGTGCTGCACAT +
Preference number: 5 (lower is better)
Translates to: QRPRCWQTRWLAPAG*QAGSGGTYTDCAAH
Trigger: ATGTGCAGCACAGTCTGTATATGTTCCACCCGACCCTGCCTGGCATCCTGCTGGAGCTAGCCAACGTGTCTGCCAACATCGTGGCCTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS CCA 90 bp CGGTCCCGGATAGCCTGGTCGCTGTCTGAGCTGCCTTCACCCAAGTaGATCACTCTACTGCCTGGGACAAGGTCTTGCACTTTGTGTTTG +
Preference number: 5 (lower is better)
Translates to: RSRIAWSLSELPSPK*ITLLPGTRSCTLCL
Trigger: CAAACACAAAGTGCAAGACCTTGTCCCAGGCAGTAGAGTGATCCACTTGGGTGAAGGCAGCTCAGACAGCGACCAGGCTATCCGGGACCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CAA 90 bp CGCTTTCCAGGAGACATGCTCCCTTCTGCTGTGGGGAAGCAGCTTCCAAGCCTCCGGGAAGGCACAGGCTaGCTCTTCAAGTTATCTTCG +
Preference number: 5 (lower is better)
Translates to: RFPGDMLPSAVGKQLPSLREGTG*LFKLSS
Trigger: CGAAGATAACTTGAAGAGCAAGCCTGTGCCTTCCCG...GAGGCTTGGAAGCTGCTTCCCCACAGCAGAAGGGAGCATGTCTCCTGGAAAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CAA 90 bp TGGTTTCCATGGTGGCTGGGGTCATGGGACTGCTTTGGCTACAGAGCTATGGATTACAAGGGCGACATCTaGGGCCACGGGTCTCTCCCA +
Preference number: 5 (lower is better)
Translates to: WFPWWLGSWDCFGYRAMDYKGDI*GHGSLP
Trigger: TGGGAGAGACCCGTGGCCCAAGATGTCGCCCTTGTA...ATCCATAGCTCTGTAGCCAAAGCAGTCCCATGACCCCAGCCACCATGGAAACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CAA 90 bp CCGAGAGCAGGCCAGCTTTCCAAGAGGCTTCCTTTTCACAGTTGGAATCTCTCCTACAAGGGCGACATCTaGGGCCACGGGTCTCTCCCA +
Preference number: 5 (lower is better)
Translates to: PRAGQLSKRLPFHSWNLSYKGDI*GHGSLP
Trigger: TGGGAGAGACCCGTGGCCCAAGATGTCGCCCTTGTA...GGAGAGATTCCAACTGTGAAAAGGAAGCCTCTTGGAAAGCTGGCCTGCTCTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CAA 90 bp GTGCTGATGAGTGACCCAGCCCCCATCTCAGGCTTCAGTGGTGTTAGTCTGCACAGCCACAGAGGGCACTaGCACAGGGCAGGAGAATAT +
Preference number: 5 (lower is better)
Translates to: VLMSDPAPISGFSGVSLHSHRGH*HRAGEY
Trigger: ATATTCTCCTGCCCTGTGCAAGTGCCCTCTGTGGCT...GTGCAGACTAACACCACTGAAGCCTGAGATGGGGGCTGGGTCACTCATCAGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000114988.8
CDS-3UTR CAA 90 bp AGGCCAGCTTTCCAAGAGGCTTCCTTTTCACAGTTGGAATCTCTCCGTGTGCTCCAGGCACATCTGAGCTaGCTGGGCCCGTCAGGAGCA +
Preference number: 5 (lower is better)
Translates to: RPAFQEASFSQLESLRVLQAHLS*LGPSGA
Trigger: TGCTCCTGACGGGCCCAGCAAGCTCAGATGTGCCTG...GAGCACACGGAGAGATTCCAACTGTGAAAAGGAAGCCTCTTGGAAAGCTGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CAA 90 bp TACAGAGCTATGGATGTGATCTGGGCAAAGCTGCTCTGTTGCCCTTGGGCTTCACAGGCACATCTGAGCTaGCTGGGCCCGTCAGGAGCA +
Preference number: 5 (lower is better)
Translates to: YRAMDVIWAKLLCCPWASQAHLS*LGPSGA
Trigger: TGCTCCTGACGGGCCCAGCAAGCTCAGATGTGCCTG...TGAAGCCCAAGGGCAACAGAGCAGCTTTGCCCAGATCACATCCATAGCTCTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CAA 90 bp GCGTACAGTCTGGAAATCCCTCGCACCCGGAGGCTCTGGTCAGACTCAGGGTTGTCTTGCACTTTGTGTTaGGTGACAGAGACCAGGCCA +
Preference number: 5 (lower is better)
Translates to: AYSLEIPRTRRLWSDSGLSCTLC*VTETRP
Trigger: TGGCCTGGTCTCTGTCACCAAACACAAAGTGCAAGA...CAACCCTGAGTCTGACCAGAGCCTCCGGGTGCGAGGGATTTCCAGACTGTACGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CAA 90 bp GTCTGGAAATCCCTCGCACCCGGAGGCTCTGGTCAGACTCAGGGTTGCTCGCTTTCTTGCACTTTGTGTTaGGTGACAGAGACCAGGCCA +
Preference number: 5 (lower is better)
Translates to: VWKSLAPGGSGQTQGCSLSCTLC*VTETRP
Trigger: TGGCCTGGTCTCTGTCACCAAACACAAAGTGCAAGA...AAGCGAGCAACCCTGAGTCTGACCAGAGCCTCCGGGTGCGAGGGATTTCCAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS GCA 90 bp TGGTCACATGAAGGAGGGCGACACCATCTCCATCCACACCAAGGCTaGCTCTGTGGCCAATCTGGTACCCAGTGCTACCTGAATAGAGAG +
Preference number: 5 (lower is better)
Translates to: WSHEGGRHHLHPHQG*LCGQSGTQCYLNRE
Trigger: CTCTCTATTCAGGTAGCACTGGGTACCAGATTGGCCACAGAGGCAGCCTTGGTGTGGATGGAGATGGTGTCGCCCTCCTTCATGTGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS CCA 90 bp CACAACGATACAGGCAGAAGACACCTCGTCACTGTCCAGTGTCTGTaGCATGGCACACTTTACAAGGGCGACATCTTGGGCCACGGGTCT +
Preference number: 5 (lower is better)
Translates to: HNDTGRRHLVTVQCL*HGTLYKGDILGHGS
Trigger: AGACCCGTGGCCCAAGATGTCGCCCTTGTAAAGTGTGCCATGCCACAGACACTGGACAGTGACGAGGTGTCTTCTGCCTGTATCGTTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS CCA 90 bp AGGAGGTCTGGAGTACCGTCACCATCACCATCAATGTCAGGCACCTaGAGCAGAGGGCTCAGGATGGAAACGTTCCCACTAAAGCTGCTG +
Preference number: 5 (lower is better)
Translates to: RRSGVPSPSPSMSGT*SRGLRMETFPLKLL
Trigger: CAGCAGCTTTAGTGGGAACGTTTCCATCCTGAGCCCTCTGCTCCAGGTGCCTGACATTGATGGTGATGGTGACGGTACTCCAGACCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS CCA 90 bp AGAGGGCACTTGCACAGGGCAGGAGAATATACTGAGCACCAGTTCTaGTCACATGAAGGAGGGCGACACCATCTCCATCCACACCAAGGC +
Preference number: 5 (lower is better)
Translates to: RGHLHRAGEYTEHQF*SHEGGRHHLHPHQG
Trigger: GCCTTGGTGTGGATGGAGATGGTGTCGCCCTCCTTCATGTGACCAGAACTGGTGCTCAGTATATTCTCCTGCCCTGTGCAAGTGCCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS CCA 90 bp TGCTGCACATCCGGGGGATCCATCTCATTAGTGCTCACAAGATCATaGAGGCCCCAGAAGAAGAAGGCTGAGCGGTGGTCTGCAGTCATC +
Preference number: 5 (lower is better)
Translates to: CCTSGGSISLVLTRS*RPQKKKAERWSAVI
Trigger: GATGACTGCAGACCACCGCTCAGCCTTCTTCTTCTGGGGCCTCCATGATCTTGTGAGCACTAATGAGATGGATCCCCCGGATGTGCAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CAA 90 bp CTTCAGGAACAACAAACAAGGCACAAGGTGAGACCGCCATCAGATAAGCACCAGCAGGCACATCTGAGCTaGCTGGGCCCGTCAGGAGCA +
Preference number: 5 (lower is better)
Translates to: LQEQQTRHKVRPPSDKHQQAHLS*LGPSGA
Trigger: TGCTCCTGACGGGCCCAGCAAGCTCAGATGTGCCTG...CTGGTGCTTATCTGATGGCGGTCTCACCTTGTGCCTTGTTTGTTGTTCCTGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CAA 90 bp GAGCAGCACAGCACACAGTGGTGGCTTTCCTGGGAGAGGGTAAGGAGGCAGGAATCTTGCACTTTGTGTTaGGTGACAGAGACCAGGCCA +
Preference number: 5 (lower is better)
Translates to: EQHSTQWWLSWERVRRQESCTLC*VTETRP
Trigger: TGGCCTGGTCTCTGTCACCAAACACAAAGTGCAAGA...TTCCTGCCTCCTTACCCTCTCCCAGGAAAGCCACCACTGTGTGCTGTGCTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS GCA 90 bp AGCAGGATGCCAGGCAGGGTCGGGTGGAACATATACAGACTGTGCTaGACATCCGGGGGATCCATCTCATTAGTGCTCACAAGATCATGG +
Preference number: 5 (lower is better)
Translates to: SRMPGRVGWNIYRLC*TSGGSISLVLTRSW
Trigger: CCATGATCTTGTGAGCACTAATGAGATGGATCCCCCGGATGTGCAGCACAGTCTGTATATGTTCCACCCGACCCTGCCTGGCATCCTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS GCA 90 bp TCCAGCAGGATGCCAGGCAGGGTCGGGTGGAACATATACAGACTGTaGTGCACATCCGGGGGATCCATCTCATTAGTGCTCACAAGATCA +
Preference number: 5 (lower is better)
Translates to: SSRMPGRVGWNIYRL*CTSGGSISLVLTRS
Trigger: TGATCTTGTGAGCACTAATGAGATGGATCCCCCGGATGTGCAGCACAGTCTGTATATGTTCCACCCGACCCTGCCTGGCATCCTGCTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS GCA 90 bp CTGCCTTCACCCAAGTGGATCACTCTACTGCCTGGGACAAGGTCTTaGACTTTGTGTTTGGTGACAGAGACCAGGCCAGGCACATCTGAG +
Preference number: 5 (lower is better)
Translates to: LPSPKWITLLPGTRS*TLCLVTETRPGTSE
Trigger: CTCAGATGTGCCTGGCCTGGTCTCTGTCACCAAACACAAAGTGCAAGACCTTGTCCCAGGCAGTAGAGTGATCCACTTGGGTGAAGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS CCA 90 bp TGGAACATATACAGACTGTGCTGCACATCCGGGGGATCAAGATCATaGAGGCCCCAGAAGAAGAAGGCTGAGCGGTGGTCTGCAGTCATC +
Preference number: 5 (lower is better)
Translates to: WNIYRLCCTSGGSRS*RPQKKKAERWSAVI
Trigger: GATGACTGCAGACCACCGCTCAGCCTTCTTCTTCTGGGGCCTCCATGATCTTGATCCCCCGGATGTGCAGCACAGTCTGTATATGTTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000141240.3
CDS-3UTR CAA 90 bp CTTCAGGAACAACAAACAAGGCACAAGGTGAGACCGCCATCAGATAAGCACCAGTACAAGGGCGACATCTaGGGCCACGGGTCTCTCCCA +
Preference number: 5 (lower is better)
Translates to: LQEQQTRHKVRPPSDKHQYKGDI*GHGSLP
Trigger: TGGGAGAGACCCGTGGCCCAAGATGTCGCCCTTGTA...CTGGTGCTTATCTGATGGCGGTCTCACCTTGTGCCTTGTTTGTTGTTCCTGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CAA 90 bp CGAGAGCAGGCCAGCTTTCCAAGAGGCTTCCTTTTCACAGTTGGAATCTCTCCGAGCCACAGAGGGCACTaGCACAGGGCAGGAGAATAT +
Preference number: 5 (lower is better)
Translates to: REQASFPRGFLFTVGISPSHRGH*HRAGEY
Trigger: ATATTCTCCTGCCCTGTGCAAGTGCCCTCTGTGGCT...CGGAGAGATTCCAACTGTGAAAAGGAAGCCTCTTGGAAAGCTGGCCTGCTCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CAA 90 bp CCGAGAGCAGGCCAGCTTTCCAAGAGGCTTCCTTTTCACAGTTGGAATCTCTCCAGCCACAGAGGGCACTaGCACAGGGCAGGAGAATAT +
Preference number: 5 (lower is better)
Translates to: PRAGQLSKRLPFHSWNLSSHRGH*HRAGEY
Trigger: ATATTCTCCTGCCCTGTGCAAGTGCCCTCTGTGGCT...GGAGAGATTCCAACTGTGAAAAGGAAGCCTCTTGGAAAGCTGGCCTGCTCTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CAA 90 bp TTTCCATGGTGGCTGGGGTCATGGGACTGCTTTGGCTACAGAGCTATGGATGTGAGCCACAGAGGGCACTaGCACAGGGCAGGAGAATAT +
Preference number: 5 (lower is better)
Translates to: FPWWLGSWDCFGYRAMDVSHRGH*HRAGEY
Trigger: ATATTCTCCTGCCCTGTGCAAGTGCCCTCTGTGGCT...CACATCCATAGCTCTGTAGCCAAAGCAGTCCCATGACCCCAGCCACCATGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CAA 90 bp GGTTTCCATGGTGGCTGGGGTCATGGGACTGCTTTGGCTACAGAGCTATGGATGGCCTGGGACAAGGTCTaGCACTTTGTGTTTGGTGAC +
Preference number: 5 (lower is better)
Translates to: GFHGGWGHGTALATELWMAWDKV*HFVFGD
Trigger: GTCACCAAACACAAAGTGCAAGACCTTGTCCCAGGC...CATCCATAGCTCTGTAGCCAAAGCAGTCCCATGACCCCAGCCACCATGGAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS GCA 90 bp CAAGTCCTGGCCAGCTTTCCCTGGGATATTCATCAGGTAGCGAACTaGTCCAAGTCTGTGCAGAAGCCTCCTGTGGACAGAGTGATTGAG +
Preference number: 5 (lower is better)
Translates to: QVLASFPWDIHQVAN*SKSVQKPPVDRVIE
Trigger: CTCAATCACTCTGTCCACAGGAGGCTTCTGCACAGACTTGGAGCAGTTCGCTACCTGATGAATATCCCAGGGAAAGCTGGCCAGGACTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CAA 90 bp TGGTTTCCATGGTGGCTGGGGTCATGGGACTGCTTTGGCTACAGAGCTATGGATCGGGAAGGCACAGGCTaGCTCTTCAAGTTATCTTCG +
Preference number: 5 (lower is better)
Translates to: WFPWWLGSWDCFGYRAMDREGTG*LFKLSS
Trigger: CGAAGATAACTTGAAGAGCAAGCCTGTGCCTTCCCG...ATCCATAGCTCTGTAGCCAAAGCAGTCCCATGACCCCAGCCACCATGGAAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CAA 90 bp CGAGAGCAGGCCAGCTTTCCAAGAGGCTTCCTTTTCACAGTTGGAATCTCTCCGCGGGAAGGCACAGGCTaGCTCTTCAAGTTATCTTCG +
Preference number: 5 (lower is better)
Translates to: REQASFPRGFLFTVGISPREGTG*LFKLSS
Trigger: CGAAGATAACTTGAAGAGCAAGCCTGTGCCTTCCCG...CGGAGAGATTCCAACTGTGAAAAGGAAGCCTCTTGGAAAGCTGGCCTGCTCTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CAA 90 bp CGAATCATCAGGGCGAGCAGTGAGGTCAGCATGAAGGCCGAGAGCAGGCCAGCTAGTTATCTTCGTTTCTaGGTAGGTTTCCTGGGTTTT +
Preference number: 5 (lower is better)
Translates to: RIIRASSEVSMKAESRPASYLRF*VGFLGF
Trigger: AAAACCCAGGAAACCTACCAAGAAACGAAGATAACT...AGCTGGCCTGCTCTCGGCCTTCATGCTGACCTCACTGCTCGCCCTGATGATTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CAA 90 bp AGGCCAGCTTTCCAAGAGGCTTCCTTTTCACAGTTGGAATCTCTCCGTGTGCTCCGGGAAGGCACAGGCTaGCTCTTCAAGTTATCTTCG +
Preference number: 5 (lower is better)
Translates to: RPAFQEASFSQLESLRVLREGTG*LFKLSS
Trigger: CGAAGATAACTTGAAGAGCAAGCCTGTGCCTTCCCG...GAGCACACGGAGAGATTCCAACTGTGAAAAGGAAGCCTCTTGGAAAGCTGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CAA 90 bp TCATGGGACTGCTTTGGCTACAGAGCTATGGATGTGATCTGGGCAAAGCTGCTCGCCTGGGACAAGGTCTaGCACTTTGTGTTTGGTGAC +
Preference number: 5 (lower is better)
Translates to: SWDCFGYRAMDVIWAKLLAWDKV*HFVFGD
Trigger: GTCACCAAACACAAAGTGCAAGACCTTGTCCCAGGC...GAGCAGCTTTGCCCAGATCACATCCATAGCTCTGTAGCCAAAGCAGTCCCATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS TCA 90 bp GTCGTACATGACTGCATTGTTGTAGTCAAGCTTCCACGTGCCCTGTaGGGAGGGACGGTCTGGACATGGGATGATGAAAGACAGGACAAA +
Preference number: 5 (lower is better)
Translates to: VVHDCIVVVKLPRAL*GGTVWTWDDERQDK
Trigger: TTTGTCCTGTCTTTCATCATCCCATGTCCAGACCGTCCCTCCTCACAGGGCACGTGGAAGCTTGACTACAACAATGCAGTCATGTACGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS TCA 90 bp AGTGGAAAAGCCTGCATTGTTGTAGTCAAGCTTCCACGTGCCCTGTaGGGAGGGACGGTCTGGACATGGGATGATGAAAGACAGGACAAA +
Preference number: 5 (lower is better)
Translates to: SGKACIVVVKLPRAL*GGTVWTWDDERQDK
Trigger: TTTGTCCTGTCTTTCATCATCCCATGTCCAGACCGTCCCTCCTCACAGGGCACGTGGAAGCTTGACTACAACAATGCAGGCTTTTCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000151293.2
CDS-3UTR CAA 90 bp CTTCAGGAACAACAAACAAGGCACAAGGTGAGACCGCCATCAGATAAGCACCAGCGGGAAGGCACAGGCTaGCTCTTCAAGTTATCTTCG +
Preference number: 5 (lower is better)
Translates to: LQEQQTRHKVRPPSDKHQREGTG*LFKLSS
Trigger: CGAAGATAACTTGAAGAGCAAGCCTGTGCCTTCCCG...CTGGTGCTTATCTGATGGCGGTCTCACCTTGTGCCTTGTTTGTTGTTCCTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CAA 90 bp CCCATCAGTGCAAATCGTTTATTGTGTTGGTTTCCATGGTGGCTGGGGTCATGGGCCTGGGACAAGGTCTaGCACTTTGTGTTTGGTGAC +
Preference number: 5 (lower is better)
Translates to: PISANRLLCWFPWWLGSWAWDKV*HFVFGD
Trigger: GTCACCAAACACAAAGTGCAAGACCTTGTCCCAGGC...CCATGACCCCAGCCACCATGGAAACCAACACAATAAACGATTTGCACTGATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CAA 90 bp ATCAGTGCAAATCGTTTATTGTGTTGGTTTCCATGGTGGCTGGGGTCATGGGACCGGGAAGGCACAGGCTaGCTCTTCAAGTTATCTTCG +
Preference number: 5 (lower is better)
Translates to: ISANRLLCWFPWWLGSWDREGTG*LFKLSS
Trigger: CGAAGATAACTTGAAGAGCAAGCCTGTGCCTTCCCG...GTCCCATGACCCCAGCCACCATGGAAACCAACACAATAAACGATTTGCACTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CAA 90 bp CAGTGCAAATCGTTTATTGTGTTGGTTTCCATGGTGGCTGGGGTCATGGGACTGTCTTGCACTTTGTGTTaGGTGACAGAGACCAGGCCA +
Preference number: 5 (lower is better)
Translates to: QCKSFIVLVSMVAGVMGLSCTLC*VTETRP
Trigger: TGGCCTGGTCTCTGTCACCAAACACAAAGTGCAAGA...CAGTCCCATGACCCCAGCCACCATGGAAACCAACACAATAAACGATTTGCACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CAA 90 bp CCCATCAGTGCAAATCGTTTATTGTGTTGGTTTCCATGGTGGCTGGGGTCATGGTCTTGCACTTTGTGTTaGGTGACAGAGACCAGGCCA +
Preference number: 5 (lower is better)
Translates to: PISANRLLCWFPWWLGSWSCTLC*VTETRP
Trigger: TGGCCTGGTCTCTGTCACCAAACACAAAGTGCAAGA...CCATGACCCCAGCCACCATGGAAACCAACACAATAAACGATTTGCACTGATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CAA 90 bp ATCAGTGCAAATCGTTTATTGTGTTGGTTTCCATGGTGGCTGGGGTCATGGGACGCCTGGGACAAGGTCTaGCACTTTGTGTTTGGTGAC +
Preference number: 5 (lower is better)
Translates to: ISANRLLCWFPWWLGSWDAWDKV*HFVFGD
Trigger: GTCACCAAACACAAAGTGCAAGACCTTGTCCCAGGC...GTCCCATGACCCCAGCCACCATGGAAACCAACACAATAAACGATTTGCACTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CAA 90 bp CGAGAGCAGGCCAGCTTTCCAAGAGGCTTCCTTTTCACAGTTGGAATCTCTCCGAGTTATCTTCGTTTCTaGGTAGGTTTCCTGGGTTTT +
Preference number: 5 (lower is better)
Translates to: REQASFPRGFLFTVGISPSYLRF*VGFLGF
Trigger: AAAACCCAGGAAACCTACCAAGAAACGAAGATAACT...CGGAGAGATTCCAACTGTGAAAAGGAAGCCTCTTGGAAAGCTGGCCTGCTCTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CAA 90 bp GTTTCCATGGTGGCTGGGGTCATGGGACTGCTTTGGCTACAGAGCTATGGATGTAGTTATCTTCGTTTCTaGGTAGGTTTCCTGGGTTTT +
Preference number: 5 (lower is better)
Translates to: VSMVAGVMGLLWLQSYGCSYLRF*VGFLGF
Trigger: AAAACCCAGGAAACCTACCAAGAAACGAAGATAACT...ACATCCATAGCTCTGTAGCCAAAGCAGTCCCATGACCCCAGCCACCATGGAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CAA 90 bp AGGCCAGCTTTCCAAGAGGCTTCCTTTTCACAGTTGGAATCTCTCCGTGTGCTCAGTTATCTTCGTTTCTaGGTAGGTTTCCTGGGTTTT +
Preference number: 5 (lower is better)
Translates to: RPAFQEASFSQLESLRVLSYLRF*VGFLGF
Trigger: AAAACCCAGGAAACCTACCAAGAAACGAAGATAACT...GAGCACACGGAGAGATTCCAACTGTGAAAAGGAAGCCTCTTGGAAAGCTGGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS-3UTR CAA 90 bp CAAATCGTTTATTGTGTTGGTTTCCATGGTGGCTGGGGTCATGGGACTGCTTTGAGTTATCTTCGTTTCTaGGTAGGTTTCCTGGGTTTT +
Preference number: 5 (lower is better)
Translates to: QIVYCVGFHGGWGHGTALSYLRF*VGFLGF
Trigger: AAAACCCAGGAAACCTACCAAGAAACGAAGATAACT...CAAAGCAGTCCCATGACCCCAGCCACCATGGAAACCAACACAATAAACGATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS CCA 72 bp GTGGATGGTGGGCCCCCAGGCAGGCTTGGGAGGGGCTaGCTCCACAGGATAGACCCAGTACTGAGGTCCAGA +
Preference number: 6 (lower is better)
Translates to: VDGGPPGRLGRG*LHRIDPVLRSR
Trigger: TCTGGACCTCAGTACTGGGTCTATCCTGTGGAGCCAGCCCCTCCCAAGCCTGCCTGGGGGCCCACCATCCAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS CAA 72 bp AGAAGAAGGCTGAGCGGTGGTCTGCAGTCATCAGGCTaGTGGATGGTGGGCCCCCAGGCAGGCTTGGGAGGG +
Preference number: 6 (lower is better)
Translates to: RRRLSGGLQSSG*WMVGPQAGLGG
Trigger: CCCTCCCAAGCCTGCCTGGGGGCCCACCATCCACAAGCCTGATGACTGCAGACCACCGCTCAGCCTTCTTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS CCA 72 bp GGACGGCATCAAAGGCCACGATGTTGGCAGACACGTTaGCTAGCTCCAGCAGGATGCCAGGCAGGGTCGGGT +
Preference number: 6 (lower is better)
Translates to: GRHQRPRCWQTR*LAPAGCQAGSG
Trigger: ACCCGACCCTGCCTGGCATCCTGCTGGAGCTAGCCAACGTGTCTGCCAACATCGTGGCCTTTGATGCCGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS CCA 72 bp CGGTACCGTAGTCGGGAGAACCGGTCCCGGATAGCCTaGTCGCTGTCTGAGCTGCCTTCACCCAAGTGGATC +
Preference number: 6 (lower is better)
Translates to: RYRSRENRSRIA*SLSELPSPKWI
Trigger: GATCCACTTGGGTGAAGGCAGCTCAGACAGCGACCAGGCTATCCGGGACCGGTTCTCCCGACTACGGTACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS CAA 72 bp AGGACGGCATCAAAGGCCACGATGTTGGCAGACACGTaGGCTAGCTCCAGCAGGATGCCAGGCAGGGTCGGG +
Preference number: 6 (lower is better)
Translates to: RTASKATMLADT*ASSSRMPGRVG
Trigger: CCCGACCCTGCCTGGCATCCTGCTGGAGCTAGCCAACGTGTCTGCCAACATCGTGGCCTTTGATGCCGTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS CAA 90 bp CTGAGCTTGCTGGGCCCGTCAGGAGCACATAGGCAGCATGGCGGCTaGGCTCAAGCAGGACGGCATCAAAGGCCACGATGTTGGCAGACA +
Preference number: 6 (lower is better)
Translates to: LSLLGPSGAHRQHGG*AQAGRHQRPRCWQT
Trigger: TGTCTGCCAACATCGTGGCCTTTGATGCCGTCCTGCTTGAGCCAAGCCGCCATGCTGCCTATGTGCTCCTGACGGGCCCAGCAAGCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS TCA 72 bp TCGGGAGAACCGGTCCCGGATAGCCTGGTCGCTGTCTaGGCTGCCTTCACCCAAGTGGATCACTCTACTGCC +
Preference number: 6 (lower is better)
Translates to: SGEPVPDSLVAV*AAFTQVDHSTA
Trigger: GGCAGTAGAGTGATCCACTTGGGTGAAGGCAGCTCAGACAGCGACCAGGCTATCCGGGACCGGTTCTCCCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS CCA 72 bp TGGGCCCGTCAGGAGCACATAGGCAGCATGGCGGCTTaGCTCAAGCAGGACGGCATCAAAGGCCACGATGTT +
Preference number: 6 (lower is better)
Translates to: WARQEHIGSMAA*LKQDGIKGHDV
Trigger: AACATCGTGGCCTTTGATGCCGTCCTGCTTGAGCCAAGCCGCCATGCTGCCTATGTGCTCCTGACGGGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS CAA 90 bp AGGGCGACATCTTGGGCCACGGGTCTCTCCCAGAGCACGCTGCCATaGGCTCCTGACACCGCAACCACAAAGGCACAAGGAGTGGAAAAG +
Preference number: 6 (lower is better)
Translates to: RATSWATGLSQSTLP*APDTATTKAQGVEK
Trigger: CTTTTCCACTCCTTGTGCCTTTGTGGTTGCGGTGTCAGGAGCCAATGGCAGCGTGCTCTGGGAGAGACCCGTGGCCCAAGATGTCGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS CCA 72 bp GTCTGTGGCATGGCACACTTTACAAGGGCGACATCTTaGGCCACGGGTCTCTCCCAGAGCACGCTGCCATTG +
Preference number: 6 (lower is better)
Translates to: VCGMAHFTRATS*ATGLSQSTLPL
Trigger: CAATGGCAGCGTGCTCTGGGAGAGACCCGTGGCCCAAGATGTCGCCCTTGTAAAGTGTGCCATGCCACAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS CCA 72 bp TTGGCTAGCTCCAGCAGGATGCCAGGCAGGGTCGGGTaGAACATATACAGACTGTGCTGCACATCCGGGGGA +
Preference number: 6 (lower is better)
Translates to: LASSSRMPGRVG*NIYRLCCTSGG
Trigger: TCCCCCGGATGTGCAGCACAGTCTGTATATGTTCCACCCGACCCTGCCTGGCATCCTGCTGGAGCTAGCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS TCA 72 bp CACGGGTCTCTCCCAGAGCACGCTGCCATTGGCTCCTaGCACCGCAACCACAAAGGCACAAGGAGTGGAAAA +
Preference number: 6 (lower is better)
Translates to: HGSLPEHAAIGS*HRNHKGTRSGK
Trigger: TTTTCCACTCCTTGTGCCTTTGTGGTTGCGGTGTCAGGAGCCAATGGCAGCGTGCTCTGGGAGAGACCCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS TCA 72 bp TCTGGTACCCAGTGCTACCTGAATAGAGAGCTCCACTaGCCTCCTGTCCCTCCTGGGCGAGGATCAGGAGGT +
Preference number: 6 (lower is better)
Translates to: SGTQCYLNRELH*PPVPPGRGSGG
Trigger: ACCTCCTGATCCTCGCCCAGGAGGGACAGGAGGTCAGTGGAGCTCTCTATTCAGGTAGCACTGGGTACCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS TCA 72 bp GCTGCCTCTGTGGCCAATCTGGTACCCAGTGCTACCTaGATAGAGAGCTCCACTGACCTCCTGTCCCTCCTG +
Preference number: 6 (lower is better)
Translates to: AASVANLVPSAT*IESSTDLLSLL
Trigger: CAGGAGGGACAGGAGGTCAGTGGAGCTCTCTATTCAGGTAGCACTGGGTACCAGATTGGCCACAGAGGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS TCA 72 bp TTTGTGTTTGGTGACAGAGACCAGGCCAGGCACATCTaGGCTTGCTGGGCCCGTCAGGAGCACATAGGCAGC +
Preference number: 6 (lower is better)
Translates to: FVFGDRDQARHI*ACWARQEHIGS
Trigger: GCTGCCTATGTGCTCCTGACGGGCCCAGCAAGCTCAGATGTGCCTGGCCTGGTCTCTGTCACCAAACACAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS GCA 72 bp ATGCCAGGCAGGGTCGGGTGGAACATATACAGACTGTaGTGCACATCCGGGGGATCAAGATCATGGAGGCCC +
Preference number: 6 (lower is better)
Translates to: MPGRVGWNIYRL*CTSGGSRSWRP
Trigger: GGGCCTCCATGATCTTGATCCCCCGGATGTGCAGCACAGTCTGTATATGTTCCACCCGACCCTGCCTGGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000141240.3
CDS CAA 72 bp TGTCTGTGGCATGGCACACTTTACAAGGGCGACATCTaGGGCCACGGGTCTCTCCCAGAGCACGCTGCCATT +
Preference number: 6 (lower is better)
Translates to: CLWHGTLYKGDI*GHGSLPEHAAI
Trigger: AATGGCAGCGTGCTCTGGGAGAGACCCGTGGCCCAAGATGTCGCCCTTGTAAAGTGTGCCATGCCACAGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS TCA 72 bp GCTCACAAGATCATGGAGGCCCCAGAAGAAGAAGGCTaGGCGGTGGTCTGCAGTCATCAGGCTTGTGGATGG +
Preference number: 6 (lower is better)
Translates to: AHKIMEAPEEEG*AVVCSHQACGW
Trigger: CCATCCACAAGCCTGATGACTGCAGACCACCGCTCAGCCTTCTTCTTCTGGGGCCTCCATGATCTTGTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS TCA 72 bp GGGATCAAGATCATGGAGGCCCCAGAAGAAGAAGGCTaGGCGGTGGTCTGCAGTCATCAGGCTTGTGGATGG +
Preference number: 6 (lower is better)
Translates to: GIKIMEAPEEEG*AVVCSHQACGW
Trigger: CCATCCACAAGCCTGATGACTGCAGACCACCGCTCAGCCTTCTTCTTCTGGGGCCTCCATGATCTTGATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141240.3
CDS GCA 72 bp CGATGTTGGCAGACACGTTGGCTAGCTCCAGCAGGATaGCAGGCAGGGTCGGGTGGAACATATACAGACTGT +
Preference number: 6 (lower is better)
Translates to: RCWQTRWLAPAG*QAGSGGTYTDC
Trigger: ACAGTCTGTATATGTTCCACCCGACCCTGCCTGGCATCCTGCTGGAGCTAGCCAACGTGTCTGCCAACATCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS CCA 72 bp CAGAAGACACCTCGTCACTGTCCAGTGTCTGTGGCATaGCACACTTTACAAGGGCGACATCTTGGGCCACGG +
Preference number: 6 (lower is better)
Translates to: QKTPRHCPVSVA*HTLQGRHLGPR
Trigger: CCGTGGCCCAAGATGTCGCCCTTGTAAAGTGTGCCATGCCACAGACACTGGACAGTGACGAGGTGTCTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS CCA 72 bp TACAGACTGTGCTGCACATCCGGGGGATCAAGATCATaGAGGCCCCAGAAGAAGAAGGCTGAGCGGTGGTCT +
Preference number: 6 (lower is better)
Translates to: YRLCCTSGGSRS*RPQKKKAERWS
Trigger: AGACCACCGCTCAGCCTTCTTCTTCTGGGGCCTCCATGATCTTGATCCCCCGGATGTGCAGCACAGTCTGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000141240.3
CDS GCA 72 bp ATGCCAGGCAGGGTCGGGTGGAACATATACAGACTGTaGTGCACATCCGGGGGATCCATCTCATTAGTGCTC +
Preference number: 6 (lower is better)
Translates to: MPGRVGWNIYRL*CTSGGSISLVL
Trigger: GAGCACTAATGAGATGGATCCCCCGGATGTGCAGCACAGTCTGTATATGTTCCACCCGACCCTGCCTGGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS CCA 72 bp ACAGGCAGAAGACACCTCGTCACTGTCCAGTGTCTGTaGCATGGCACACTTTACAAGGGCGACATCTTGGGC +
Preference number: 6 (lower is better)
Translates to: TGRRHLVTVQCL*HGTLYKGDILG
Trigger: GCCCAAGATGTCGCCCTTGTAAAGTGTGCCATGCCACAGACACTGGACAGTGACGAGGTGTCTTCTGCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS CCA 72 bp GGAGTACCGTCACCATCACCATCAATGTCAGGCACCTaGAGCAGAGGGCTCAGGATGGAAACGTTCCCACTA +
Preference number: 6 (lower is better)
Translates to: GVPSPSPSMSGT*SRGLRMETFPL
Trigger: TAGTGGGAACGTTTCCATCCTGAGCCCTCTGCTCCAGGTGCCTGACATTGATGGTGATGGTGACGGTACTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS CCA 72 bp TCCGGGGGATCCATCTCATTAGTGCTCACAAGATCATaGAGGCCCCAGAAGAAGAAGGCTGAGCGGTGGTCT +
Preference number: 6 (lower is better)
Translates to: SGGSISLVLTRS*RPQKKKAERWS
Trigger: AGACCACCGCTCAGCCTTCTTCTTCTGGGGCCTCCATGATCTTGTGAGCACTAATGAGATGGATCCCCCGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS CCA 72 bp ATAGCCTGGTCGCTGTCTGAGCTGCCTTCACCCAAGTaGATCACTCTACTGCCTGGGACAAGGTCTTGCACT +
Preference number: 6 (lower is better)
Translates to: IAWSLSELPSPK*ITLLPGTRSCT
Trigger: AGTGCAAGACCTTGTCCCAGGCAGTAGAGTGATCCACTTGGGTGAAGGCAGCTCAGACAGCGACCAGGCTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS GCA 72 bp GCCAGCTTTCCCTGGGATATTCATCAGGTAGCGAACTaGTCCAAGTCTGTGCAGAAGCCTCCTGTGGACAGA +
Preference number: 6 (lower is better)
Translates to: ASFPWDIHQVAN*SKSVQKPPVDR
Trigger: TCTGTCCACAGGAGGCTTCTGCACAGACTTGGAGCAGTTCGCTACCTGATGAATATCCCAGGGAAAGCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS CAA 90 bp TCACCCAAGTGGATCACTCTACTGCCTGGGACAAGGTCTTGCACTTaGTGTTTGGTGACAGAGACCAGGCCAGGCACATCTGAGCTTGCT +
Preference number: 6 (lower is better)
Translates to: SPKWITLLPGTRSCT*CLVTETRPGTSELA
Trigger: AGCAAGCTCAGATGTGCCTGGCCTGGTCTCTGTCACCAAACACAAAGTGCAAGACCTTGTCCCAGGCAGTAGAGTGATCCACTTGGGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS CCA 72 bp TTGCACAGGGCAGGAGAATATACTGAGCACCAGTTCTaGTCACATGAAGGAGGGCGACACCATCTCCATCCA +
Preference number: 6 (lower is better)
Translates to: LHRAGEYTEHQF*SHEGGRHHLHP
Trigger: TGGATGGAGATGGTGTCGCCCTCCTTCATGTGACCAGAACTGGTGCTCAGTATATTCTCCTGCCCTGTGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS CAA 72 bp ACTGTGCGGCACCGGGACAAGCGGGAAGGCACAGGCTaGCTCTTCAAGTTATCTTCGTTTCTTGGTAGGTTT +
Preference number: 6 (lower is better)
Translates to: TVRHRDKREGTG*LFKLSSFLGRF
Trigger: AAACCTACCAAGAAACGAAGATAACTTGAAGAGCAAGCCTGTGCCTTCCCGCTTGTCCCGGTGCCGCACAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000151293.2
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS CAA 72 bp TGGATCACTCTACTGCCTGGGACAAGGTCTTGCACTTaGTGTTTGGTGACAGAGACCAGGCCAGGCACATCT +
Preference number: 6 (lower is better)
Translates to: WITLLPGTRSCT*CLVTETRPGTS
Trigger: AGATGTGCCTGGCCTGGTCTCTGTCACCAAACACAAAGTGCAAGACCTTGTCCCAGGCAGTAGAGTGATCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS CAA 90 bp AAAAATGCCACTGTGCGGCACCGGGACAAGCGGGAAGGCACAGGCTaGCTCTTCAAGTTATCTTCGTTTCTTGGTAGGTTTCCTGGGTTT +
Preference number: 6 (lower is better)
Translates to: KNATVRHRDKREGTG*LFKLSSFLGRFPGF
Trigger: AAACCCAGGAAACCTACCAAGAAACGAAGATAACTTGAAGAGCAAGCCTGTGCCTTCCCGCTTGTCCCGGTGCCGCACAGTGGCATTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000151293.2
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS CAA 72 bp CATAGAGACTCTTCACAGAGAAGCCACAGAGGGCACTaGCACAGGGCAGGAGAATATACTGAGCACCAGTTC +
Preference number: 6 (lower is better)
Translates to: HRDSSQRSHRGH*HRAGEYTEHQF
Trigger: GAACTGGTGCTCAGTATATTCTCCTGCCCTGTGCAAGTGCCCTCTGTGGCTTCTCTGTGAAGAGTCTCTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS TCA 72 bp CCTTGTTTATGTCTCCCAGAGCCAGGAAGTCGTACATaGCTGCATTGTTGTAGTCAAGCTTCCACGTGCCCT +
Preference number: 6 (lower is better)
Translates to: PCLCLPEPGSRT*LHCCSQASTCP
Trigger: AGGGCACGTGGAAGCTTGACTACAACAATGCAGTCATGTACGACTTCCTGGCTCTGGGAGACATAAACAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS GCA 72 bp ATAGAGACTCTTCACAGAGAAGCCACAGAGGGCACTTaGACAGGGCAGGAGAATATACTGAGCACCAGTTCT +
Preference number: 6 (lower is better)
Translates to: IETLHREATEGT*TGQENILSTSS
Trigger: AGAACTGGTGCTCAGTATATTCTCCTGCCCTGTGCAAGTGCCCTCTGTGGCTTCTCTGTGAAGAGTCTCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2
CDS CAA 72 bp AAGGCACAGGCTTGCTCTTCAAGTTATCTTCGTTTCTaGGTAGGTTTCCTGGGTTTTCCTGTGATTTCTTGT +
Preference number: 6 (lower is better)
Translates to: KAQACSSSYLRF*VGFLGFPVISC
Trigger: ACAAGAAATCACAGGAAAACCCAGGAAACCTACCAAGAAACGAAGATAACTTGAAGAGCAAGCCTGTGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000114988.8
ENSMUST00000118487.8
ENSMUST00000141240.3
ENSMUST00000151293.2
ENSMUST00000234175.2
ENSMUST00000234262.2
ENSMUST00000234554.2
ENSMUST00000234687.2