Pregenerated sensors for FAM228A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000079177Ensembl transcript IDs: ENSMUST00000111154.4, ENSMUST00000220978.2, ENSMUST00000222363.2
Found 99 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCCTGCTCGGCTTTCCTGAGTTTGGGGAGCATGTTATGCTGGTGCTaGATCCAGATGCAGCTGAAGTCAGGGAGAGTTGCTGCAGACAGC | + |
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Preference number: 1 (lower is better) Translates to: ACSAFLSLGSMLCWC*IQMQLKSGRVAADS Trigger: GCTGTCTGCAGCAACTCTCCCTGACTTCAGCTGCATCTGGATTCAGCACCAGCATAACATGCTCCCCAAACTCAGGAAAGCCGAGCAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111154.4 ENSMUST00000222363.2 |
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| 3UTR TCA 90 bp | GTGAAGTGCATAGGAGCTATGCTTGGCCTGTCTGAACCAAAGGGGTaGCCCACAGGAAGGATGAAGGGCAAAGGTCGGGACTCTCTGCAC | + |
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Preference number: 1 (lower is better) Translates to: VKCIGAMLGLSEPKG*PTGRMKGKGRDSLH Trigger: GTGCAGAGAGTCCCGACCTTTGCCCTTCATCCTTCCTGTGGGTCACCCCTTTGGTTCAGACAGGCCAAGCATAGCTCCTATGCACTTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111154.4 |
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| 3UTR GCA 90 bp | AAGGATGAAGGGCAAAGGTCGGGACTCTCTGCACATCTGTTGCTCTaGACCTCCAGGGTCTCGATCACATCCTGTCTCCTGTCCTGTCAG | + |
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Preference number: 1 (lower is better) Translates to: KDEGQRSGLSAHLLL*TSRVSITSCLLSCQ Trigger: CTGACAGGACAGGAGACAGGATGTGATCGAGACCCTGGAGGTGCAGAGCAACAGATGTGCAGAGAGTCCCGACCTTTGCCCTTCATCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111154.4 ENSMUST00000222363.2 |
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| 3UTR GCA 90 bp | ACAGGAAGGATGAAGGGCAAAGGTCGGGACTCTCTGCACATCTGTTaGTCTGCACCTCCAGGGTCTCGATCACATCCTGTCTCCTGTCCT | + |
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Preference number: 1 (lower is better) Translates to: TGRMKGKGRDSLHIC*SAPPGSRSHPVSCP Trigger: AGGACAGGAGACAGGATGTGATCGAGACCCTGGAGGTGCAGAGCAACAGATGTGCAGAGAGTCCCGACCTTTGCCCTTCATCCTTCCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111154.4 ENSMUST00000222363.2 |
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| 3UTR TCA 90 bp | CTTTTGTGGGTGGGTGAAGTGCATAGGAGCTATGCTTGGCCTGTCTaGACCAAAGGGGTGACCCACAGGAAGGATGAAGGGCAAAGGTCG | + |
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Preference number: 1 (lower is better) Translates to: LLWVGEVHRSYAWPV*TKGVTHRKDEGQRS Trigger: CGACCTTTGCCCTTCATCCTTCCTGTGGGTCACCCCTTTGGTTCAGACAGGCCAAGCATAGCTCCTATGCACTTCACCCACCCACAAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111154.4 |
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| 3UTR TCA 90 bp | ATCAGGAAGCAGATAGTCCGCATACAACTACAAGTCTCCCTTTGGTaGGGAGTTCCTGTAGCCCCTTCAGTGCCCACAGAGGCAACACAG | + |
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Preference number: 1 (lower is better) Translates to: IRKQIVRIQLQVSLW*GVPVAPSVPTEATQ Trigger: CTGTGTTGCCTCTGTGGGCACTGAAGGGGCTACAGGAACTCCTCACCAAAGGGAGACTTGTAGTTGTATGCGGACTATCTGCTTCCTGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111154.4 ENSMUST00000222363.2 |
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| 3UTR TCA 90 bp | CCCAAAACTGAAACAACCAGCATCATGCTTATCTACAGGGTTCTTTaGAGAACCAGGCACAGCCTGTTGAGCAAGCCTGCTCGGCTTTCC | + |
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Preference number: 1 (lower is better) Translates to: PKTETTSIMLIYRVL*RTRHSLLSKPARLS Trigger: GGAAAGCCGAGCAGGCTTGCTCAACAGGCTGTGCCTGGTTCTTCAAAGAACCCTGTAGATAAGCATGATGCTGGTTGTTTCAGTTTTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111154.4 ENSMUST00000222363.2 |
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| 3UTR CCA 90 bp | AAGTCAGGGAGAGTTGCTGCAGACAGCCCTGTGTGTAGCATGACATaGCAATACAGCAAGTTTAAAGCTCTGGGGTCCCTCATAACTATA | + |
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Preference number: 1 (lower is better) Translates to: KSGRVAADSPVCSMT*QYSKFKALGSLITI Trigger: TATAGTTATGAGGGACCCCAGAGCTTTAAACTTGCTGTATTGCCATGTCATGCTACACACAGGGCTGTCTGCAGCAACTCTCCCTGACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111154.4 ENSMUST00000222363.2 |
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| 3UTR CCA 90 bp | CGTCCTAGATCACAGCCAGAACTTAAAAATCTAGCTGCTGTTATTTaGATATTTCTTGCTATAGCTTCCTACCTAGAGAAAAGCTGCACC | + |
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Preference number: 1 (lower is better) Translates to: RPRSQPELKNLAAVI*IFLAIASYLEKSCT Trigger: GGTGCAGCTTTTCTCTAGGTAGGAAGCTATAGCAAGAAATATCCAAATAACAGCAGCTAGATTTTTAAGTTCTGGCTGTGATCTAGGACG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000111154.4 ENSMUST00000222363.2 |
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| 3UTR CCA 90 bp | CTCAGGCCTCTTCCATTCTCCCCATTTTTATTTAAATATAATCACTaGCCTACTCACTTGAGAACACAGTTCAGCGTATTCAGATTGATT | + |
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Preference number: 1 (lower is better) Translates to: LRPLPFSPFLFKYNH*PTHLRTQFSVFRLI Trigger: AATCAATCTGAATACGCTGAACTGTGTTCTCAAGTGAGTAGGCCAGTGATTATATTTAAATAAAAATGGGGAGAATGGAAGAGGCCTGAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000111154.4 ENSMUST00000222363.2 |
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| 3UTR-3UTR TCA 90 bp | GTAGCCCCTTCAGTGCCCACAGAGGCAACACAGATTTGTTCCCACTGCCACGCCGGCACAGAGCCCTTCTaGGCACCAAATACTGGGAGG | + |
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Preference number: 2 (lower is better) Translates to: VAPSVPTEATQICSHCHAGTEPF*APNTGR Trigger: CCTCCCAGTATTTGGTGCTCAGAAGGGCTCTGTGCC...GGCGTGGCAGTGGGAACAAATCTGTGTTGCCTCTGTGGGCACTGAAGGGGCTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111154.4 ENSMUST00000222363.2 |
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| 3UTR CAA 90 bp | CACAGGAAGGATGAAGGGCAAAGGTCGGGACTCTCTGCACATCTGTaGCTCTGCACCTCCAGGGTCTCGATCACATCCTGTCTCCTGTCC | + |
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Preference number: 2 (lower is better) Translates to: HRKDEGQRSGLSAHL*LCTSRVSITSCLLS Trigger: GGACAGGAGACAGGATGTGATCGAGACCCTGGAGGTGCAGAGCAACAGATGTGCAGAGAGTCCCGACCTTTGCCCTTCATCCTTCCTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111154.4 ENSMUST00000222363.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGTGCTGAATCCAGATGCAGCTGAAGTCAGGGAGAGTTGCTGCAGACAGCCCGCACAGGAGCAGGACTaGGCTGGAATAGAGCCTAAT | + |
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Preference number: 2 (lower is better) Translates to: LVLNPDAAEVRESCCRQPAQEQD*AGIEPN Trigger: ATTAGGCTCTATTCCAGCTCAGTCCTGCTCCTGTGC...GGGCTGTCTGCAGCAACTCTCCCTGACTTCAGCTGCATCTGGATTCAGCACCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111154.4 ENSMUST00000222363.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGTGCTGAATCCAGATGCAGCTGAAGTCAGGGAGAGTTGCTGCAGACAGCCCCTAATACCTTTGAGCTaGGAACTGCCCCCAAGCCAG | + |
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Preference number: 2 (lower is better) Translates to: LVLNPDAAEVRESCCRQPLIPLS*ELPPSQ Trigger: CTGGCTTGGGGGCAGTTCCCAGCTCAAAGGTATTAG...GGGCTGTCTGCAGCAACTCTCCCTGACTTCAGCTGCATCTGGATTCAGCACCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000111154.4 ENSMUST00000222363.2 |
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| 3UTR-3UTR CCA 90 bp | GCAACATCTTTTTCCAAGCAGCTCAGAGAGTACCTCAGGCCTCTTCCATTCTCCGAGGAGAGTGCGCCCTaGCACAGGAGCAGGACTGAG | + |
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Preference number: 2 (lower is better) Translates to: ATSFSKQLREYLRPLPFSEESAP*HRSRTE Trigger: CTCAGTCCTGCTCCTGTGCCAGGGCGCACTCTCCTC...GGAGAATGGAAGAGGCCTGAGGTACTCTCTGAGCTGCTTGGAAAAAGATGTTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000111154.4 ENSMUST00000222363.2 |
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| 3UTR-3UTR GCA 90 bp | TGGGAACTGCCCCCAAGCCAGGCACAGAGCCCTTCTGAGCACCAAATACTGGGAGTATTTGCAGTTGCATaGAAGAGGTGGAGGGGTGAA | + |
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Preference number: 2 (lower is better) Translates to: WELPPSQAQSPSEHQILGVFAVA*KRWRGE Trigger: TTCACCCCTCCACCTCTTGCATGCAACTGCAAATAC...TCCCAGTATTTGGTGCTCAGAAGGGCTCTGTGCCTGGCTTGGGGGCAGTTCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000111154.4 ENSMUST00000222363.2 |
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| 3UTR-3UTR GCA 90 bp | CTGGTGCTGAATCCAGATGCAGCTGAAGTCAGGGAGAGTTGCTGCAGACAGCCCGTCAGTATTTGCAGTTaGATGCAAGAGGTGGAGGGG | + |
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Preference number: 2 (lower is better) Translates to: LVLNPDAAEVRESCCRQPVSICS*MQEVEG Trigger: CCCCTCCACCTCTTGCATGCAACTGCAAATACTGAC...GGGCTGTCTGCAGCAACTCTCCCTGACTTCAGCTGCATCTGGATTCAGCACCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111154.4 ENSMUST00000222363.2 |
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| 3UTR-3UTR GCA 90 bp | CTCCCTTTGGTGAGGAGTTCCTGTAGCCCCTTCAGTGCCCACAGAGGCAACACAGTCAGTATTTGCAGTTaGATGCAAGAGGTGGAGGGG | + |
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Preference number: 2 (lower is better) Translates to: LPLVRSSCSPFSAHRGNTVSICS*MQEVEG Trigger: CCCCTCCACCTCTTGCATGCAACTGCAAATACTGAC...TGTGTTGCCTCTGTGGGCACTGAAGGGGCTACAGGAACTCCTCACCAAAGGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111154.4 ENSMUST00000222363.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGTGCTGAATCCAGATGCAGCTGAAGTCAGGGAGAGTTGCTGCAGACAGCCCAGTTCTCTTCCCCACTaGAATGTGAGTCCAGCTTTC | + |
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Preference number: 2 (lower is better) Translates to: LVLNPDAAEVRESCCRQPSSLPH*NVSPAF Trigger: GAAAGCTGGACTCACATTTCAGTGGGGAAGAGAACT...GGGCTGTCTGCAGCAACTCTCCCTGACTTCAGCTGCATCTGGATTCAGCACCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111154.4 ENSMUST00000222363.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGGGAGAGTTGCTGCAGACAGCCCTGTGTGTAGCATGACATGGCAATACAGCCTAATACCTTTGAGCTaGGAACTGCCCCCAAGCCAG | + |
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Preference number: 2 (lower is better) Translates to: SGRVAADSPVCSMTWQYSLIPLS*ELPPSQ Trigger: CTGGCTTGGGGGCAGTTCCCAGCTCAAAGGTATTAG...GCTGTATTGCCATGTCATGCTACACACAGGGCTGTCTGCAGCAACTCTCCCTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000111154.4 ENSMUST00000222363.2 |
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| 3UTR-3UTR TCA 90 bp | GAGGAGACTCCTGATATCAGGAAGCAGATAGTCCGCATACAACTACAAGTCTCCGGCACAGAGCCCTTCTaGGCACCAAATACTGGGAGG | + |
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Preference number: 2 (lower is better) Translates to: EETPDIRKQIVRIQLQVSGTEPF*APNTGR Trigger: CCTCCCAGTATTTGGTGCTCAGAAGGGCTCTGTGCC...GGAGACTTGTAGTTGTATGCGGACTATCTGCTTCCTGATATCAGGAGTCTCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111154.4 ENSMUST00000222363.2 |
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| 3UTR-3UTR TCA 90 bp | TCTTTTTCCAAGCAGCTCAGAGAGTACCTCAGGCCTCTTCCATTCTCCCCATTTGCACAGGAGCAGGACTaGGCTGGAATAGAGCCTAAT | + |
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Preference number: 2 (lower is better) Translates to: SFSKQLREYLRPLPFSPFAQEQD*AGIEPN Trigger: ATTAGGCTCTATTCCAGCTCAGTCCTGCTCCTGTGC...AAATGGGGAGAATGGAAGAGGCCTGAGGTACTCTCTGAGCTGCTTGGAAAAAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000111154.4 ENSMUST00000222363.2 |
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| 3UTR-3UTR GCA 90 bp | GGCTTTCCTGAGTTTGGGGAGCATGTTATGCTGGTGCTGAATCCAGATGCAGCTTGCACCGTCAGTATTTaGAGTTGCATGCAAGAGGTG | + |
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Preference number: 2 (lower is better) Translates to: GFPEFGEHVMLVLNPDAACTVSI*SCMQEV Trigger: CACCTCTTGCATGCAACTGCAAATACTGACGGTGCA...AGCTGCATCTGGATTCAGCACCAGCATAACATGCTCCCCAAACTCAGGAAAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111154.4 ENSMUST00000222363.2 |
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| 3UTR-3UTR CCA 90 bp | GTAGCCCCTTCAGTGCCCACAGAGGCAACACAGATTTGTTCCCACTGCCACGCCCTAGCTGCTGTTATTTaGATATTTCTTGCTATAGCT | + |
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Preference number: 2 (lower is better) Translates to: VAPSVPTEATQICSHCHALAAVI*IFLAIA Trigger: AGCTATAGCAAGAAATATCCAAATAACAGCAGCTAG...GGCGTGGCAGTGGGAACAAATCTGTGTTGCCTCTGTGGGCACTGAAGGGGCTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111154.4 ENSMUST00000222363.2 |
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| 3UTR-3UTR GCA 90 bp | CTACTCTTCCCTGTAGGGACTTTAATCCTCACTGGGGCAAGTGTGACTAGTATTGTATTTGCAGTTGCATaGAAGAGGTGGAGGGGTGAA | + |
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Preference number: 2 (lower is better) Translates to: LLFPVGTLILTGASVTSIVFAVA*KRWRGE Trigger: TTCACCCCTCCACCTCTTGCATGCAACTGCAAATAC...AATACTAGTCACACTTGCCCCAGTGAGGATTAAAGTCCCTACAGGGAAGAGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111154.4 ENSMUST00000222363.2 |
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| 3UTR-3UTR CCA 90 bp | TCTTTTTCCAAGCAGCTCAGAGAGTACCTCAGGCCTCTTCCATTCTCCCCATTTACAATCAGGATACCTTaGCCAGATTTAGGACACAGG | + |
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Preference number: 2 (lower is better) Translates to: SFSKQLREYLRPLPFSPFTIRIP*PDLGHR Trigger: CCTGTGTCCTAAATCTGGCCAAGGTATCCTGATTGT...AAATGGGGAGAATGGAAGAGGCCTGAGGTACTCTCTGAGCTGCTTGGAAAAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000111154.4 ENSMUST00000222363.2 |
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| 3UTR CAA 90 bp | AATCACTGGCCTACTCACTTGAGAACACAGTTCAGCGTATTCAGATaGATTTTAAAGACTCATCCCTTACTGACTCCAGATACTGACCCC | + |
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Preference number: 2 (lower is better) Translates to: NHWPTHLRTQFSVFR*ILKTHPLLTPDTDP Trigger: GGGGTCAGTATCTGGAGTCAGTAAGGGATGAGTCTTTAAAATCAATCTGAATACGCTGAACTGTGTTCTCAAGTGAGTAGGCCAGTGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111154.4 ENSMUST00000222363.2 |
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| 3UTR-3UTR CCA 90 bp | TCTTTTTCCAAGCAGCTCAGAGAGTACCTCAGGCCTCTTCCATTCTCCCCATTTGTGTGTAGCATGACATaGCAATACAGCAAGTTTAAA | + |
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Preference number: 2 (lower is better) Translates to: SFSKQLREYLRPLPFSPFVCSMT*QYSKFK Trigger: TTTAAACTTGCTGTATTGCCATGTCATGCTACACAC...AAATGGGGAGAATGGAAGAGGCCTGAGGTACTCTCTGAGCTGCTTGGAAAAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000111154.4 ENSMUST00000222363.2 |
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| 3UTR-3UTR CCA 90 bp | CTACTCTTCCCTGTAGGGACTTTAATCCTCACTGGGGCAAGTGTGACTAGTATTCTAGCTGCTGTTATTTaGATATTTCTTGCTATAGCT | + |
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Preference number: 2 (lower is better) Translates to: LLFPVGTLILTGASVTSILAAVI*IFLAIA Trigger: AGCTATAGCAAGAAATATCCAAATAACAGCAGCTAG...AATACTAGTCACACTTGCCCCAGTGAGGATTAAAGTCCCTACAGGGAAGAGTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111154.4 ENSMUST00000222363.2 |
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| 3UTR GCA 72 bp | GGGCAAAGGTCGGGACTCTCTGCACATCTGTTGCTCTaGACCTCCAGGGTCTCGATCACATCCTGTCTCCTG | + |
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Preference number: 3 (lower is better) Translates to: GQRSGLSAHLLL*TSRVSITSCLL Trigger: CAGGAGACAGGATGTGATCGAGACCCTGGAGGTGCAGAGCAACAGATGTGCAGAGAGTCCCGACCTTTGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111154.4 ENSMUST00000222363.2 |
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| 3UTR GCA 72 bp | AACCAGAAGGATGGGGTGAGGTGGGGCCAAGAGATCTaGCTGACCCTTCTACTCGCTTGCCCAGGGCTTTGT | + |
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Preference number: 3 (lower is better) Translates to: NQKDGVRWGQEI*LTLLLACPGLC Trigger: ACAAAGCCCTGGGCAAGCGAGTAGAAGGGTCAGGCAGATCTCTTGGCCCCACCTCACCCCATCCTTCTGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111154.4 |
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| 3UTR-3UTR CAA 90 bp | CTCCCTTTGGTGAGGAGTTCCTGTAGCCCCTTCAGTGCCCACAGAGGCAACACACGTCAGTATTTGCAGTaGCATGCAAGAGGTGGAGGG | + |
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Preference number: 3 (lower is better) Translates to: LPLVRSSCSPFSAHRGNTRQYLQ*HARGGG Trigger: CCCTCCACCTCTTGCATGCAACTGCAAATACTGACG...TGTGTTGCCTCTGTGGGCACTGAAGGGGCTACAGGAACTCCTCACCAAAGGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111154.4 ENSMUST00000222363.2 |
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| 3UTR-3UTR CAA 90 bp | ACAAGTCTCCCTTTGGTGAGGAGTTCCTGTAGCCCCTTCAGTGCCCACAGAGGCCGTCAGTATTTGCAGTaGCATGCAAGAGGTGGAGGG | + |
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Preference number: 3 (lower is better) Translates to: TSLPLVRSSCSPFSAHRGRQYLQ*HARGGG Trigger: CCCTCCACCTCTTGCATGCAACTGCAAATACTGACG...GCCTCTGTGGGCACTGAAGGGGCTACAGGAACTCCTCACCAAAGGGAGACTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111154.4 ENSMUST00000222363.2 |
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| 3UTR-3UTR CAA 90 bp | GCACAGCCTGTTGAGCAAGCCTGCTCGGCTTTCCTGAGTTTGGGGAGCATGTTAAGAGGCAACACAGATTaGTTCCCACTGCCACGCCTG | + |
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Preference number: 3 (lower is better) Translates to: AQPVEQACSAFLSLGSMLRGNTD*FPLPRL Trigger: CAGGCGTGGCAGTGGGAACAAATCTGTGTTGCCTCT...TAACATGCTCCCCAAACTCAGGAAAGCCGAGCAGGCTTGCTCAACAGGCTGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111154.4 ENSMUST00000222363.2 |
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| 3UTR TCA 72 bp | ATAGGAGCTATGCTTGGCCTGTCTGAACCAAAGGGGTaGCCCACAGGAAGGATGAAGGGCAAAGGTCGGGAC | + |
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Preference number: 3 (lower is better) Translates to: IGAMLGLSEPKG*PTGRMKGKGRD Trigger: GTCCCGACCTTTGCCCTTCATCCTTCCTGTGGGTCACCCCTTTGGTTCAGACAGGCCAAGCATAGCTCCTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111154.4 |
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| 3UTR-3UTR CAA 90 bp | TCAGGGAGAGTTGCTGCAGACAGCCCTGTGTGTAGCATGACATGGCAATACAGCAGAGGCAACACAGATTaGTTCCCACTGCCACGCCTG | + |
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Preference number: 3 (lower is better) Translates to: SGRVAADSPVCSMTWQYSRGNTD*FPLPRL Trigger: CAGGCGTGGCAGTGGGAACAAATCTGTGTTGCCTCT...GCTGTATTGCCATGTCATGCTACACACAGGGCTGTCTGCAGCAACTCTCCCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111154.4 ENSMUST00000222363.2 |
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| 3UTR-3UTR CAA 90 bp | TCTTTTTCCAAGCAGCTCAGAGAGTACCTCAGGCCTCTTCCATTCTCCCCATTTACCAGGCACAGCCTGTaGAGCAAGCCTGCTCGGCTT | + |
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Preference number: 3 (lower is better) Translates to: SFSKQLREYLRPLPFSPFTRHSL*SKPARL Trigger: AAGCCGAGCAGGCTTGCTCAACAGGCTGTGCCTGGT...AAATGGGGAGAATGGAAGAGGCCTGAGGTACTCTCTGAGCTGCTTGGAAAAAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000111154.4 ENSMUST00000222363.2 |
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| 3UTR TCA 72 bp | CAGATAGTCCGCATACAACTACAAGTCTCCCTTTGGTaGGGAGTTCCTGTAGCCCCTTCAGTGCCCACAGAG | + |
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Preference number: 3 (lower is better) Translates to: QIVRIQLQVSLW*GVPVAPSVPTE Trigger: CTCTGTGGGCACTGAAGGGGCTACAGGAACTCCTCACCAAAGGGAGACTTGTAGTTGTATGCGGACTATCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111154.4 ENSMUST00000222363.2 |
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| 3UTR GCA 72 bp | TCTTTGAAGAACCAGGCACAGCCTGTTGAGCAAGCCTaGTCGGCTTTCCTGAGTTTGGGGAGCATGTTATGC | + |
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Preference number: 3 (lower is better) Translates to: SLKNQAQPVEQA*SAFLSLGSMLC Trigger: GCATAACATGCTCCCCAAACTCAGGAAAGCCGAGCAGGCTTGCTCAACAGGCTGTGCCTGGTTCTTCAAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111154.4 ENSMUST00000222363.2 |
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| 3UTR-3UTR CAA 90 bp | TCAGGGAGAGTTGCTGCAGACAGCCCTGTGTGTAGCATGACATGGCAATACAGCCTGAGTGAGATGACTTaGCTAACCAGAGAGGGTACA | + |
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Preference number: 3 (lower is better) Translates to: SGRVAADSPVCSMTWQYSLSEMT*LTREGT Trigger: TGTACCCTCTCTGGTTAGCAAAGTCATCTCACTCAG...GCTGTATTGCCATGTCATGCTACACACAGGGCTGTCTGCAGCAACTCTCCCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111154.4 ENSMUST00000222363.2 |
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| 3UTR TCA 72 bp | CAGGGAGAGTTGCTGCAGACAGCCCTGTGTGTAGCATaGCATGGCAATACAGCAAGTTTAAAGCTCTGGGGT | + |
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Preference number: 3 (lower is better) Translates to: QGELLQTALCVA*HGNTASLKLWG Trigger: ACCCCAGAGCTTTAAACTTGCTGTATTGCCATGTCATGCTACACACAGGGCTGTCTGCAGCAACTCTCCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111154.4 ENSMUST00000222363.2 |
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| 3UTR TCA 72 bp | GCTTTCCTGAGTTTGGGGAGCATGTTATGCTGGTGCTaGATCCAGATGCAGCTGAAGTCAGGGAGAGTTGCT | + |
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Preference number: 3 (lower is better) Translates to: AFLSLGSMLCWC*IQMQLKSGRVA Trigger: AGCAACTCTCCCTGACTTCAGCTGCATCTGGATTCAGCACCAGCATAACATGCTCCCCAAACTCAGGAAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111154.4 ENSMUST00000222363.2 |
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| 3UTR CCA 72 bp | AGAGTTGCTGCAGACAGCCCTGTGTGTAGCATGACATaGCAATACAGCAAGTTTAAAGCTCTGGGGTCCCTC | + |
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Preference number: 3 (lower is better) Translates to: RVAADSPVCSMT*QYSKFKALGSL Trigger: GAGGGACCCCAGAGCTTTAAACTTGCTGTATTGCCATGTCATGCTACACACAGGGCTGTCTGCAGCAACTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111154.4 ENSMUST00000222363.2 |
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| 3UTR CCA 72 bp | TTTCTGGGGCTTGATTTCACTGGTGGCTTTTGTGGGTaGGTGAAGTGCATAGGAGCTATGCTTGGCCTGTCT | + |
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Preference number: 3 (lower is better) Translates to: FLGLDFTGGFCG*VKCIGAMLGLS Trigger: AGACAGGCCAAGCATAGCTCCTATGCACTTCACCCACCCACAAAAGCCACCAGTGAAATCAAGCCCCAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111154.4 |
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| 3UTR-3UTR CAA 90 bp | GTAGCCCCTTCAGTGCCCACAGAGGCAACACAGATTTGTTCCCACTGCCACGCCTCTAGCTGCTGTTATTaGGATATTTCTTGCTATAGC | + |
|
Preference number: 3 (lower is better) Translates to: VAPSVPTEATQICSHCHASSCCY*DISCYS Trigger: GCTATAGCAAGAAATATCCAAATAACAGCAGCTAGA...GGCGTGGCAGTGGGAACAAATCTGTGTTGCCTCTGTGGGCACTGAAGGGGCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111154.4 ENSMUST00000222363.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGGAACTGCCCCCAAGCCAGGCACAGAGCCCTTCTGAGCACCAAATACTGGGATCTAGCTGCTGTTATTaGGATATTTCTTGCTATAGC | + |
|
Preference number: 3 (lower is better) Translates to: WELPPSQAQSPSEHQILGSSCCY*DISCYS Trigger: GCTATAGCAAGAAATATCCAAATAACAGCAGCTAGA...TCCCAGTATTTGGTGCTCAGAAGGGCTCTGTGCCTGGCTTGGGGGCAGTTCCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000111154.4 ENSMUST00000222363.2 |
||
| 3UTR-3UTR CAA 90 bp | ACAAGTCTCCCTTTGGTGAGGAGTTCCTGTAGCCCCTTCAGTGCCCACAGAGGCGGTAATAAAGCTGGCTaGCTGTTAAATGTTTCAATG | + |
|
Preference number: 3 (lower is better) Translates to: TSLPLVRSSCSPFSAHRGGNKAG*LLNVSM Trigger: CATTGAAACATTTAACAGCAAGCCAGCTTTATTACC...GCCTCTGTGGGCACTGAAGGGGCTACAGGAACTCCTCACCAAAGGGAGACTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111154.4 ENSMUST00000222363.2 |
||
| 3UTR TCA 72 bp | GAAACAACCAGCATCATGCTTATCTACAGGGTTCTTTaGAGAACCAGGCACAGCCTGTTGAGCAAGCCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: ETTSIMLIYRVL*RTRHSLLSKPA Trigger: AGCAGGCTTGCTCAACAGGCTGTGCCTGGTTCTTCAAAGAACCCTGTAGATAAGCATGATGCTGGTTGTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111154.4 ENSMUST00000222363.2 |
||
| 3UTR CCA 72 bp | GTATTGTGTCCCTGTCACTCAACAATCAGGATACCTTaGCCAGATTTAGGACACAGGAGCCCTAAGGATCTG | + |
|
Preference number: 3 (lower is better) Translates to: VLCPCHSTIRIP*PDLGHRSPKDL Trigger: CAGATCCTTAGGGCTCCTGTGTCCTAAATCTGGCCAAGGTATCCTGATTGTTGAGTGACAGGGACACAATAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111154.4 ENSMUST00000222363.2 |
||
| 3UTR-3UTR CAA 90 bp | GACTCTCTATGTGGAAGGCTTTTTAACAGTTACTTTCAGAAGTTGCTTATAATGACCAGGCACAGCCTGTaGAGCAAGCCTGCTCGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: DSLCGRLFNSYFQKLLIMTRHSL*SKPARL Trigger: AAGCCGAGCAGGCTTGCTCAACAGGCTGTGCCTGGT...CATTATAAGCAACTTCTGAAAGTAACTGTTAAAAAGCCTTCCACATAGAGAGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111154.4 |
||
| 3UTR-3UTR CAA 90 bp | GACTCTCTATGTGGAAGGCTTTTTAACAGTTACTTTCAGAAGTTGCTTATAATGCTCTCTGCACATCTGTaGCTCTGCACCTCCAGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: DSLCGRLFNSYFQKLLIMLSAHL*LCTSRV Trigger: GACCCTGGAGGTGCAGAGCAACAGATGTGCAGAGAG...CATTATAAGCAACTTCTGAAAGTAACTGTTAAAAAGCCTTCCACATAGAGAGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111154.4 |
||
| 3UTR CCA 72 bp | TCACAGCCAGAACTTAAAAATCTAGCTGCTGTTATTTaGATATTTCTTGCTATAGCTTCCTACCTAGAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: SQPELKNLAAVI*IFLAIASYLEK Trigger: TTTCTCTAGGTAGGAAGCTATAGCAAGAAATATCCAAATAACAGCAGCTAGATTTTTAAGTTCTGGCTGTGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000111154.4 ENSMUST00000222363.2 |
||
| CDS-3UTR TCA 90 bp | TGGGAACTGCCCCCAAGCCAGGCACAGAGCCCTTCTGAGCACCAAATACTGGGATGGCCACTGGAGGCCTaGCCTGGCTGCCTGATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: WELPPSQAQSPSEHQILGWPLEA*PGCLMQ Trigger: CTGCATCAGGCAGCCAGGTCAGGCCTCCAGTGGCCA...TCCCAGTATTTGGTGCTCAGAAGGGCTCTGTGCCTGGCTTGGGGGCAGTTCCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000111154.4 ENSMUST00000222363.2 |
||
| CDS-3UTR TCA 90 bp | GTAGCCCCTTCAGTGCCCACAGAGGCAACACAGATTTGTTCCCACTGCCACGCCCCTGACCTGGCTGCCTaGTGCAGGGACACCAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: VAPSVPTEATQICSHCHAPDLAA*CRDTRC Trigger: GCATCTGGTGTCCCTGCATCAGGCAGCCAGGTCAGG...GGCGTGGCAGTGGGAACAAATCTGTGTTGCCTCTGTGGGCACTGAAGGGGCTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111154.4 ENSMUST00000222363.2 |
||
| CDS-3UTR CCA 90 bp | GTAGCCCCTTCAGTGCCCACAGAGGCAACACAGATTTGTTCCCACTGCCACGCCCTGGGACTGGAGCAATaGGGCCTGAGCGAGAACGGG | + |
|
Preference number: 4 (lower is better) Translates to: VAPSVPTEATQICSHCHALGLEQ*GLSENG Trigger: CCCGTTCTCGCTCAGGCCCCATTGCTCCAGTCCCAG...GGCGTGGCAGTGGGAACAAATCTGTGTTGCCTCTGTGGGCACTGAAGGGGCTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111154.4 ENSMUST00000222363.2 |
||
| CDS-3UTR TCA 90 bp | CTCCCTTTGGTGAGGAGTTCCTGTAGCCCCTTCAGTGCCCACAGAGGCAACACACCTGACCTGGCTGCCTaGTGCAGGGACACCAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: LPLVRSSCSPFSAHRGNTPDLAA*CRDTRC Trigger: GCATCTGGTGTCCCTGCATCAGGCAGCCAGGTCAGG...TGTGTTGCCTCTGTGGGCACTGAAGGGGCTACAGGAACTCCTCACCAAAGGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111154.4 ENSMUST00000222363.2 |
||
| CDS-3UTR CCA 90 bp | TGGGAACTGCCCCCAAGCCAGGCACAGAGCCCTTCTGAGCACCAAATACTGGGAACTGGAGGCCTGACCTaGCTGCCTGATGCAGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: WELPPSQAQSPSEHQILGTGGLT*LPDAGT Trigger: TGTCCCTGCATCAGGCAGCCAGGTCAGGCCTCCAGT...TCCCAGTATTTGGTGCTCAGAAGGGCTCTGTGCCTGGCTTGGGGGCAGTTCCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000111154.4 ENSMUST00000222363.2 |
||
| CDS-3UTR GCA 90 bp | ACAAGTCTCCCTTTGGTGAGGAGTTCCTGTAGCCCCTTCAGTGCCCACAGAGGCCGAGCAGAGGCTCTCTaGCTCTCTCTGGGACTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TSLPLVRSSCSPFSAHRGRAEAL*LSLGLE Trigger: CTCCAGTCCCAGAGAGAGGCAGAGAGCCTCTGCTCG...GCCTCTGTGGGCACTGAAGGGGCTACAGGAACTCCTCACCAAAGGGAGACTTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111154.4 ENSMUST00000222363.2 |
||
| CDS-3UTR CCA 90 bp | CTGGTGCTGAATCCAGATGCAGCTGAAGTCAGGGAGAGTTGCTGCAGACAGCCCCTCTCTGCCTCTCTCTaGGACTGGAGCAATGGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LVLNPDAAEVRESCCRQPLSASL*DWSNGA Trigger: GGCCCCATTGCTCCAGTCCCAGAGAGAGGCAGAGAG...GGGCTGTCTGCAGCAACTCTCCCTGACTTCAGCTGCATCTGGATTCAGCACCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111154.4 ENSMUST00000222363.2 |
||
| CDS-3UTR TCA 90 bp | CTCCCTTTGGTGAGGAGTTCCTGTAGCCCCTTCAGTGCCCACAGAGGCAACACATCTTCTTCCCACCAGTaGTGGCCTCGGCACACTATC | + |
|
Preference number: 4 (lower is better) Translates to: LPLVRSSCSPFSAHRGNTSSSHQ*WPRHTI Trigger: GATAGTGTGCCGAGGCCATCACTGGTGGGAAGAAGA...TGTGTTGCCTCTGTGGGCACTGAAGGGGCTACAGGAACTCCTCACCAAAGGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111154.4 ENSMUST00000222363.2 |
||
| CDS-3UTR CCA 90 bp | GGCTTTCCTGAGTTTGGGGAGCATGTTATGCTGGTGCTGAATCCAGATGCAGCTCTGGGACTGGAGCAATaGGGCCTGAGCGAGAACGGG | + |
|
Preference number: 4 (lower is better) Translates to: GFPEFGEHVMLVLNPDAALGLEQ*GLSENG Trigger: CCCGTTCTCGCTCAGGCCCCATTGCTCCAGTCCCAG...AGCTGCATCTGGATTCAGCACCAGCATAACATGCTCCCCAAACTCAGGAAAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111154.4 ENSMUST00000222363.2 |
||
| CDS-3UTR TCA 90 bp | TCTTTTTCCAAGCAGCTCAGAGAGTACCTCAGGCCTCTTCCATTCTCCCCATTTTGGCCACTGGAGGCCTaGCCTGGCTGCCTGATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SFSKQLREYLRPLPFSPFWPLEA*PGCLMQ Trigger: CTGCATCAGGCAGCCAGGTCAGGCCTCCAGTGGCCA...AAATGGGGAGAATGGAAGAGGCCTGAGGTACTCTCTGAGCTGCTTGGAAAAAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000111154.4 ENSMUST00000222363.2 |
||
| CDS-3UTR GCA 90 bp | GGCTTTCCTGAGTTTGGGGAGCATGTTATGCTGGTGCTGAATCCAGATGCAGCTCGAGCAGAGGCTCTCTaGCTCTCTCTGGGACTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GFPEFGEHVMLVLNPDAARAEAL*LSLGLE Trigger: CTCCAGTCCCAGAGAGAGGCAGAGAGCCTCTGCTCG...AGCTGCATCTGGATTCAGCACCAGCATAACATGCTCCCCAAACTCAGGAAAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111154.4 ENSMUST00000222363.2 |
||
| CDS-3UTR GCA 90 bp | GCACAGCCTGTTGAGCAAGCCTGCTCGGCTTTCCTGAGTTTGGGGAGCATGTTACCTTGTACCTGTTCCTaGCACCAGGCTTACTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: AQPVEQACSAFLSLGSMLPCTCS*HQAYSA Trigger: TGCAGAGTAAGCCTGGTGGCAGGAACAGGTACAAGG...TAACATGCTCCCCAAACTCAGGAAAGCCGAGCAGGCTTGCTCAACAGGCTGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111154.4 ENSMUST00000222363.2 |
||
| CDS-3UTR CCA 90 bp | GCAACATCTTTTTCCAAGCAGCTCAGAGAGTACCTCAGGCCTCTTCCATTCTCCACTGGAGGCCTGACCTaGCTGCCTGATGCAGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: ATSFSKQLREYLRPLPFSTGGLT*LPDAGT Trigger: TGTCCCTGCATCAGGCAGCCAGGTCAGGCCTCCAGT...GGAGAATGGAAGAGGCCTGAGGTACTCTCTGAGCTGCTTGGAAAAAGATGTTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000111154.4 ENSMUST00000222363.2 |
||
| 3UTR CAA 72 bp | GAAGCAGATAGTCCGCATACAACTACAAGTCTCCCTTaGGTGAGGAGTTCCTGTAGCCCCTTCAGTGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: EADSPHTTTSLP*VRSSCSPFSAH Trigger: GTGGGCACTGAAGGGGCTACAGGAACTCCTCACCAAAGGGAGACTTGTAGTTGTATGCGGACTATCTGCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111154.4 ENSMUST00000222363.2 |
||
| CDS-3UTR GCA 90 bp | CTCCCTTTGGTGAGGAGTTCCTGTAGCCCCTTCAGTGCCCACAGAGGCAACACAGTAACTGGTCCCTTTTaGTTCTCTGAACTCTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LPLVRSSCSPFSAHRGNTVTGPF*FSELLL Trigger: CAGCAAGAGTTCAGAGAAGCAAAAGGGACCAGTTAC...TGTGTTGCCTCTGTGGGCACTGAAGGGGCTACAGGAACTCCTCACCAAAGGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111154.4 ENSMUST00000222363.2 |
||
| CDS-3UTR GCA 90 bp | ACAAGTCTCCCTTTGGTGAGGAGTTCCTGTAGCCCCTTCAGTGCCCACAGAGGCGTAACTGGTCCCTTTTaGTTCTCTGAACTCTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TSLPLVRSSCSPFSAHRGVTGPF*FSELLL Trigger: CAGCAAGAGTTCAGAGAAGCAAAAGGGACCAGTTAC...GCCTCTGTGGGCACTGAAGGGGCTACAGGAACTCCTCACCAAAGGGAGACTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111154.4 ENSMUST00000222363.2 |
||
| CDS-3UTR TCA 90 bp | GAGGAGACTCCTGATATCAGGAAGCAGATAGTCCGCATACAACTACAAGTCTCCATCCTGGCTGAGCCTTaGGGCTCTGAACTGCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: EETPDIRKQIVRIQLQVSILAEP*GSELPF Trigger: GAAAGGCAGTTCAGAGCCTCAAGGCTCAGCCAGGAT...GGAGACTTGTAGTTGTATGCGGACTATCTGCTTCCTGATATCAGGAGTCTCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111154.4 ENSMUST00000222363.2 |
||
| CDS-3UTR TCA 90 bp | TCTTTTTCCAAGCAGCTCAGAGAGTACCTCAGGCCTCTTCCATTCTCCCCATTTTCTTCTTCCCACCAGTaGTGGCCTCGGCACACTATC | + |
|
Preference number: 4 (lower is better) Translates to: SFSKQLREYLRPLPFSPFSSSHQ*WPRHTI Trigger: GATAGTGTGCCGAGGCCATCACTGGTGGGAAGAAGA...AAATGGGGAGAATGGAAGAGGCCTGAGGTACTCTCTGAGCTGCTTGGAAAAAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000111154.4 ENSMUST00000222363.2 |
||
| CDS-3UTR TCA 90 bp | CTGGTGCTGAATCCAGATGCAGCTGAAGTCAGGGAGAGTTGCTGCAGACAGCCCTTAGTTTCTCCACACTaGAATGTTCATCACACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LVLNPDAAEVRESCCRQPLVSPH*NVHHTW Trigger: CCAAGTGTGATGAACATTTCAGTGTGGAGAAACTAA...GGGCTGTCTGCAGCAACTCTCCCTGACTTCAGCTGCATCTGGATTCAGCACCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111154.4 ENSMUST00000222363.2 |
||
| CDS-3UTR TCA 90 bp | ACAAGTCTCCCTTTGGTGAGGAGTTCCTGTAGCCCCTTCAGTGCCCACAGAGGCAACTCTTGCTGTTTTTaGAACAGACACGATGAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: TSLPLVRSSCSPFSAHRGNSCCF*NRHDED Trigger: GTCTTCATCGTGTCTGTTTCAAAAACAGCAAGAGTT...GCCTCTGTGGGCACTGAAGGGGCTACAGGAACTCCTCACCAAAGGGAGACTTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000111154.4 ENSMUST00000222363.2 |
||
| CDS-3UTR CCA 90 bp | GTAGCCCCTTCAGTGCCCACAGAGGCAACACAGATTTGTTCCCACTGCCACGCCAATGTTCATCACACTTaGAAGTTTTTGTGTCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VAPSVPTEATQICSHCHANVHHT*KFLCQP Trigger: TGGCTGACACAAAAACTTCCAAGTGTGATGAACATT...GGCGTGGCAGTGGGAACAAATCTGTGTTGCCTCTGTGGGCACTGAAGGGGCTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000111154.4 ENSMUST00000222363.2 |
||
| CDS-3UTR TCA 90 bp | GCACAGCCTGTTGAGCAAGCCTGCTCGGCTTTCCTGAGTTTGGGGAGCATGTTATTAGTTTCTCCACACTaGAATGTTCATCACACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: AQPVEQACSAFLSLGSMLLVSPH*NVHHTW Trigger: CCAAGTGTGATGAACATTTCAGTGTGGAGAAACTAA...TAACATGCTCCCCAAACTCAGGAAAGCCGAGCAGGCTTGCTCAACAGGCTGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111154.4 ENSMUST00000222363.2 |
||
| CDS-3UTR CCA 90 bp | CTGGTGCTGAATCCAGATGCAGCTGAAGTCAGGGAGAGTTGCTGCAGACAGCCCAATGTTCATCACACTTaGAAGTTTTTGTGTCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LVLNPDAAEVRESCCRQPNVHHT*KFLCQP Trigger: TGGCTGACACAAAAACTTCCAAGTGTGATGAACATT...GGGCTGTCTGCAGCAACTCTCCCTGACTTCAGCTGCATCTGGATTCAGCACCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000111154.4 ENSMUST00000222363.2 |
||
| CDS-3UTR TCA 90 bp | TCAGGGAGAGTTGCTGCAGACAGCCCTGTGTGTAGCATGACATGGCAATACAGCAACTCTTGCTGTTTTTaGAACAGACACGATGAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SGRVAADSPVCSMTWQYSNSCCF*NRHDED Trigger: GTCTTCATCGTGTCTGTTTCAAAAACAGCAAGAGTT...GCTGTATTGCCATGTCATGCTACACACAGGGCTGTCTGCAGCAACTCTCCCTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000111154.4 ENSMUST00000222363.2 |
||
| CDS-3UTR TCA 90 bp | GCAACATCTTTTTCCAAGCAGCTCAGAGAGTACCTCAGGCCTCTTCCATTCTCCTCTTCCTTAGGCAGATaGGACTTTAATGTAAAGACA | + |
|
Preference number: 4 (lower is better) Translates to: ATSFSKQLREYLRPLPFSSSLGR*DFNVKT Trigger: TGTCTTTACATTAAAGTCTCATCTGCCTAAGGAAGA...GGAGAATGGAAGAGGCCTGAGGTACTCTCTGAGCTGCTTGGAAAAAGATGTTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000111154.4 ENSMUST00000222363.2 |
||
| CDS-3UTR TCA 90 bp | GACTCTCTATGTGGAAGGCTTTTTAACAGTTACTTTCAGAAGTTGCTTATAATGATCCTGGCTGAGCCTTaGGGCTCTGAACTGCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: DSLCGRLFNSYFQKLLIMILAEP*GSELPF Trigger: GAAAGGCAGTTCAGAGCCTCAAGGCTCAGCCAGGAT...CATTATAAGCAACTTCTGAAAGTAACTGTTAAAAAGCCTTCCACATAGAGAGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111154.4 |
||
| 3UTR CAA 72 bp | CCTACTCACTTGAGAACACAGTTCAGCGTATTCAGATaGATTTTAAAGACTCATCCCTTACTGACTCCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: PTHLRTQFSVFR*ILKTHPLLTPD Trigger: ATCTGGAGTCAGTAAGGGATGAGTCTTTAAAATCAATCTGAATACGCTGAACTGTGTTCTCAAGTGAGTAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111154.4 ENSMUST00000222363.2 |
||
| CDS TCA 90 bp | ATGCTCCCCCAGGATCTCGGCTGTCATCACTCTTCTTCCCACCAGTaGTGGCCTCGGCACACTATCTGCTGCCGCCCAGGAGCGTGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: MLPQDLGCHHSSSHQ*WPRHTICCRPGAWS Trigger: AGACCACGCTCCTGGGCGGCAGCAGATAGTGTGCCGAGGCCATCACTGGTGGGAAGAAGAGTGATGACAGCCGAGATCCTGGGGGAGCAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000111154.4 ENSMUST00000220978.2 ENSMUST00000222363.2 |
||
| CDS CCA 90 bp | ATAAGCCGAGCAGAGGCTCTCTGCCTCTCTCTGGGACTGGAGCAATaGGGCCTGAGCGAGAACGGGGTGAAGGAGAGACCCTTCTCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: ISRAEALCLSLGLEQ*GLSENGVKERPFSV Trigger: AACTGAGAAGGGTCTCTCCTTCACCCCGTTCTCGCTCAGGCCCCATTGCTCCAGTCCCAGAGAGAGGCAGAGAGCCTCTGCTCGGCTTAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111154.4 ENSMUST00000220978.2 ENSMUST00000222363.2 |
||
| CDS-3UTR CAA 90 bp | CTACTCTTCCCTGTAGGGACTTTAATCCTCACTGGGGCAAGTGTGACTAGTATTTCAGAACTGGCTCCCTaGTACCTGTTCCTGCCACCA | + |
|
Preference number: 5 (lower is better) Translates to: LLFPVGTLILTGASVTSISELAP*YLFLPP Trigger: TGGTGGCAGGAACAGGTACAAGGGAGCCAGTTCTGA...AATACTAGTCACACTTGCCCCAGTGAGGATTAAAGTCCCTACAGGGAAGAGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111154.4 ENSMUST00000222363.2 |
||
| CDS TCA 90 bp | AACCAGACCCTTCTTTTCAGCCTCTTTGATATCCTGGCTGAGCCTTaGGGCTCTGAACTGCCTTTCAAAAACAAGCTGGCTTCGACTGAC | + |
|
Preference number: 5 (lower is better) Translates to: NQTLLFSLFDILAEP*GSELPFKNKLASTD Trigger: GTCAGTCGAAGCCAGCTTGTTTTTGAAAGGCAGTTCAGAGCCTCAAGGCTCAGCCAGGATATCAAAGAGGCTGAAAAGAAGGGTCTGGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000111154.4 ENSMUST00000220978.2 ENSMUST00000222363.2 |
||
| CDS GCA 90 bp | TTTTCAGCCTCTTTGATATCCTGGCTGAGCCTTGAGGCTCTGAACTaGCTTTCAAAAACAAGCTGGCTTCGACTGACAGTCTTCTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: FSASLISWLSLEALN*LSKTSWLRLTVFSS Trigger: GGAAGAGAAGACTGTCAGTCGAAGCCAGCTTGTTTTTGAAAGGCAGTTCAGAGCCTCAAGGCTCAGCCAGGATATCAAAGAGGCTGAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000111154.4 ENSMUST00000220978.2 ENSMUST00000222363.2 |
||
| CDS-3UTR CAA 90 bp | TCAGGGAGAGTTGCTGCAGACAGCCCTGTGTGTAGCATGACATGGCAATACAGCAAATGTTCATCACACTaGGAAGTTTTTGTGTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: SGRVAADSPVCSMTWQYSKCSSH*EVFVSA Trigger: GGCTGACACAAAAACTTCCAAGTGTGATGAACATTT...GCTGTATTGCCATGTCATGCTACACACAGGGCTGTCTGCAGCAACTCTCCCTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000111154.4 ENSMUST00000222363.2 |
||
| CDS-3UTR CAA 90 bp | GAGGAGACTCCTGATATCAGGAAGCAGATAGTCCGCATACAACTACAAGTCTCCTTCTTTTCAGCCTCTTaGATATCCTGGCTGAGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: EETPDIRKQIVRIQLQVSFFSAS*ISWLSL Trigger: AAGGCTCAGCCAGGATATCAAAGAGGCTGAAAAGAA...GGAGACTTGTAGTTGTATGCGGACTATCTGCTTCCTGATATCAGGAGTCTCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111154.4 ENSMUST00000222363.2 |
||
| CDS-3UTR CAA 90 bp | TCTTTTTCCAAGCAGCTCAGAGAGTACCTCAGGCCTCTTCCATTCTCCCCATTTTTCTTTTCAGCCTCTTaGATATCCTGGCTGAGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: SFSKQLREYLRPLPFSPFFFSAS*ISWLSL Trigger: AAGGCTCAGCCAGGATATCAAAGAGGCTGAAAAGAA...AAATGGGGAGAATGGAAGAGGCCTGAGGTACTCTCTGAGCTGCTTGGAAAAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000111154.4 ENSMUST00000222363.2 |
||
| CDS-3UTR CAA 90 bp | GAGGAGACTCCTGATATCAGGAAGCAGATAGTCCGCATACAACTACAAGTCTCCAAATGTTCATCACACTaGGAAGTTTTTGTGTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: EETPDIRKQIVRIQLQVSKCSSH*EVFVSA Trigger: GGCTGACACAAAAACTTCCAAGTGTGATGAACATTT...GGAGACTTGTAGTTGTATGCGGACTATCTGCTTCCTGATATCAGGAGTCTCCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000111154.4 ENSMUST00000222363.2 |
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| CDS-3UTR CAA 90 bp | TCTTTTTCCAAGCAGCTCAGAGAGTACCTCAGGCCTCTTCCATTCTCCCCATTTTGCTTCTCTGAACTCTaGCTGTTTTTGAAACAGACA | + |
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Preference number: 5 (lower is better) Translates to: SFSKQLREYLRPLPFSPFCFSEL*LFLKQT Trigger: TGTCTGTTTCAAAAACAGCAAGAGTTCAGAGAAGCA...AAATGGGGAGAATGGAAGAGGCCTGAGGTACTCTCTGAGCTGCTTGGAAAAAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000111154.4 ENSMUST00000222363.2 |
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| CDS-3UTR CAA 90 bp | GAGGAGACTCCTGATATCAGGAAGCAGATAGTCCGCATACAACTACAAGTCTCCTGCTTCTCTGAACTCTaGCTGTTTTTGAAACAGACA | + |
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Preference number: 5 (lower is better) Translates to: EETPDIRKQIVRIQLQVSCFSEL*LFLKQT Trigger: TGTCTGTTTCAAAAACAGCAAGAGTTCAGAGAAGCA...GGAGACTTGTAGTTGTATGCGGACTATCTGCTTCCTGATATCAGGAGTCTCCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000111154.4 ENSMUST00000222363.2 |
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| CDS TCA 90 bp | AAAACAAGCTGGCTTCGACTGACAGTCTTCTCTTCCTTAGGCAGATaGGACTTTAATGTAAAGACAGGTTTTTCAGAACTGGCTCCCTTG | + |
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Preference number: 5 (lower is better) Translates to: KTSWLRLTVFSSLGR*DFNVKTGFSELAPL Trigger: CAAGGGAGCCAGTTCTGAAAAACCTGTCTTTACATTAAAGTCTCATCTGCCTAAGGAAGAGAAGACTGTCAGTCGAAGCCAGCTTGTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000111154.4 ENSMUST00000220978.2 ENSMUST00000222363.2 |
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| CDS CCA 72 bp | GCAGAGGCTCTCTGCCTCTCTCTGGGACTGGAGCAATaGGGCCTGAGCGAGAACGGGGTGAAGGAGAGACCC | + |
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Preference number: 6 (lower is better) Translates to: AEALCLSLGLEQ*GLSENGVKERP Trigger: GGGTCTCTCCTTCACCCCGTTCTCGCTCAGGCCCCATTGCTCCAGTCCCAGAGAGAGGCAGAGAGCCTCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111154.4 ENSMUST00000220978.2 ENSMUST00000222363.2 |
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| CDS TCA 72 bp | CAGGATCTCGGCTGTCATCACTCTTCTTCCCACCAGTaGTGGCCTCGGCACACTATCTGCTGCCGCCCAGGA | + |
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Preference number: 6 (lower is better) Translates to: QDLGCHHSSSHQ*WPRHTICCRPG Trigger: TCCTGGGCGGCAGCAGATAGTGTGCCGAGGCCATCACTGGTGGGAAGAAGAGTGATGACAGCCGAGATCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111154.4 ENSMUST00000220978.2 ENSMUST00000222363.2 |
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| CDS GCA 72 bp | GCTCCCTTGTACCTGTTCCTGCCACCAGGCTTACTCTaGATAAGCCGAGCAGAGGCTCTCTGCCTCTCTCTG | + |
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Preference number: 6 (lower is better) Translates to: APLYLFLPPGLL*ISRAEALCLSL Trigger: CAGAGAGAGGCAGAGAGCCTCTGCTCGGCTTATGCAGAGTAAGCCTGGTGGCAGGAACAGGTACAAGGGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111154.4 ENSMUST00000220978.2 ENSMUST00000222363.2 |
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| CDS GCA 72 bp | TCTTTGATATCCTGGCTGAGCCTTGAGGCTCTGAACTaGCTTTCAAAAACAAGCTGGCTTCGACTGACAGTC | + |
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Preference number: 6 (lower is better) Translates to: SLISWLSLEALN*LSKTSWLRLTV Trigger: GACTGTCAGTCGAAGCCAGCTTGTTTTTGAAAGGCAGTTCAGAGCCTCAAGGCTCAGCCAGGATATCAAAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000111154.4 ENSMUST00000220978.2 ENSMUST00000222363.2 |
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| CDS TCA 72 bp | CTTCTTTTCAGCCTCTTTGATATCCTGGCTGAGCCTTaGGGCTCTGAACTGCCTTTCAAAAACAAGCTGGCT | + |
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Preference number: 6 (lower is better) Translates to: LLFSLFDILAEP*GSELPFKNKLA Trigger: AGCCAGCTTGTTTTTGAAAGGCAGTTCAGAGCCTCAAGGCTCAGCCAGGATATCAAAGAGGCTGAAAAGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000111154.4 ENSMUST00000220978.2 ENSMUST00000222363.2 |
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| CDS CCA 72 bp | ACAACCAGACCCTTCTTTTCAGCCTCTTTGATATCCTaGCTGAGCCTTGAGGCTCTGAACTGCCTTTCAAAA | + |
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Preference number: 6 (lower is better) Translates to: TTRPFFSASLIS*LSLEALNCLSK Trigger: TTTTGAAAGGCAGTTCAGAGCCTCAAGGCTCAGCCAGGATATCAAAGAGGCTGAAAAGAAGGGTCTGGTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111154.4 ENSMUST00000220978.2 ENSMUST00000222363.2 |
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| CDS TCA 72 bp | ACTCCGGCTCTGGCCATTCCTTTAGTTTCTCCACACTaGAATGTTCATCACACTTGGAAGTTTTTGTGTCAG | + |
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Preference number: 6 (lower is better) Translates to: TPALAIPLVSPH*NVHHTWKFLCQ Trigger: CTGACACAAAAACTTCCAAGTGTGATGAACATTTCAGTGTGGAGAAACTAAAGGAATGGCCAGAGCCGGAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000111154.4 ENSMUST00000220978.2 ENSMUST00000222363.2 |
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| CDS CAA 72 bp | TTTAATGTAAAGACAGGTTTTTCAGAACTGGCTCCCTaGTACCTGTTCCTGCCACCAGGCTTACTCTGCATA | + |
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Preference number: 6 (lower is better) Translates to: FNVKTGFSELAP*YLFLPPGLLCI Trigger: TATGCAGAGTAAGCCTGGTGGCAGGAACAGGTACAAGGGAGCCAGTTCTGAAAAACCTGTCTTTACATTAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000111154.4 ENSMUST00000220978.2 ENSMUST00000222363.2 |
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