Pregenerated sensors for FAM222A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041930Ensembl transcript IDs: ENSMUST00000043650.8
Found 145 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTCAGACAGGCCTTGGCGAGATACAGTACCGCTTTCCGGAGCGCCTaGGGCCGGCAGGGCCCGGGGACTGCAGGCCTTGAGGACTTCCTG | + |
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Preference number: 1 (lower is better) Translates to: LRQALARYSTAFRSA*GRQGPGTAGLEDFL Trigger: CAGGAAGTCCTCAAGGCCTGCAGTCCCCGGGCCCTGCCGGCCCCAGGCGCTCCGGAAAGCGGTACTGTATCTCGCCAAGGCCTGTCTGAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| 3UTR CCA 90 bp | AAGATGAAGGAGCCTCGTGGCCAGCCTGGGACCCTCCCTGCTGCCTaGGGCAGCAAGCGGGAGAGGAAAGAAGCCCTGGTGTGTGAGGTC | + |
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Preference number: 1 (lower is better) Translates to: KMKEPRGQPGTLPAA*GSKRERKEALVCEV Trigger: GACCTCACACACCAGGGCTTCTTTCCTCTCCCGCTTGCTGCCCCAGGCAGCAGGGAGGGTCCCAGGCTGGCCACGAGGCTCCTTCATCTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| 3UTR GCA 90 bp | TGGATGAAAGATGAAGGAGCCTCGTGGCCAGCCTGGGACCCTCCCTaGTGCCTGGGGCAGCAAGCGGGAGAGGAAAGAAGCCCTGGTGTG | + |
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Preference number: 1 (lower is better) Translates to: WMKDEGASWPAWDPP*CLGQQAGEERSPGV Trigger: CACACCAGGGCTTCTTTCCTCTCCCGCTTGCTGCCCCAGGCAGCAGGGAGGGTCCCAGGCTGGCCACGAGGCTCCTTCATCTTTCATCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| 3UTR CCA 90 bp | AGAAGGTCCTCTTTCCCTGCCTGGATGAAAGATGAAGGAGCCTCGTaGCCAGCCTGGGACCCTCCCTGCTGCCTGGGGCAGCAAGCGGGA | + |
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Preference number: 1 (lower is better) Translates to: RRSSFPAWMKDEGAS*PAWDPPCCLGQQAG Trigger: TCCCGCTTGCTGCCCCAGGCAGCAGGGAGGGTCCCAGGCTGGCCACGAGGCTCCTTCATCTTTCATCCAGGCAGGGAAAGAGGACCTTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| 3UTR CCA 90 bp | TCTTTCCCTGCCTGGATGAAAGATGAAGGAGCCTCGTGGCCAGCCTaGGACCCTCCCTGCTGCCTGGGGCAGCAAGCGGGAGAGGAAAGA | + |
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Preference number: 1 (lower is better) Translates to: SFPAWMKDEGASWPA*DPPCCLGQQAGEER Trigger: TCTTTCCTCTCCCGCTTGCTGCCCCAGGCAGCAGGGAGGGTCCCAGGCTGGCCACGAGGCTCCTTCATCTTTCATCCAGGCAGGGAAAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| 3UTR CCA 90 bp | GGAGCTGGATTGGGTATTCCAGTTACAGCCAGGTCACCCTCCCACTaGTCCCCAGGAGACCCAGAGATGCGAAGAAGGCAAGACCGTCCT | + |
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Preference number: 1 (lower is better) Translates to: GAGLGIPVTARSPSH*SPGDPEMRRRQDRP Trigger: AGGACGGTCTTGCCTTCTTCGCATCTCTGGGTCTCCTGGGGACCAGTGGGAGGGTGACCTGGCTGTAACTGGAATACCCAATCCAGCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| 3UTR CCA 90 bp | AGCAGCCCTGTGAGATGTAGTGTAGGGATGGAGAAGAGGTTGGTCTaGGGCGTACCGGGTAGGTTGGGCGTGATTCCTAGTAGGGAGGGT | + |
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Preference number: 1 (lower is better) Translates to: SSPVRCSVGMEKRLV*GVPGRLGVIPSREG Trigger: ACCCTCCCTACTAGGAATCACGCCCAACCTACCCGGTACGCCCCAGACCAACCTCTTCTCCATCCCTACACTACATCTCACAGGGCTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| 3UTR CCA 90 bp | ACTGGGAGATTGTGGATAGAGACCCCGTGTATGACACGGGATGACTaGAGCGCCCTCTGCTGGAGACCCAGAAGGAACTTCTTGTTGGCA | + |
|
Preference number: 1 (lower is better) Translates to: TGRLWIETPCMTRDD*SALCWRPRRNFLLA Trigger: TGCCAACAAGAAGTTCCTTCTGGGTCTCCAGCAGAGGGCGCTCCAGTCATCCCGTGTCATACACGGGGTCTCTATCCACAATCTCCCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| 3UTR-3UTR GCA 90 bp | CTGCAGGCCTTGAGGACTTCCTGGGCTTCTCTCTTCCCCACGCCCCGCAGCAGTTGGGACCCTCCCTGCTaGCTGGGGCAGCAAGCGGGA | + |
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Preference number: 2 (lower is better) Translates to: LQALRTSWASLFPTPRSSWDPPC*LGQQAG Trigger: TCCCGCTTGCTGCCCCAGGCAGCAGGGAGGGTCCCA...ACTGCTGCGGGGCGTGGGGAAGAGAGAAGCCCAGGAAGTCCTCAAGGCCTGCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| 3UTR-3UTR CCA 90 bp | CTGCAGGCCTTGAGGACTTCCTGGGCTTCTCTCTTCCCCACGCCCCGCAGCAGTTCCCGCCCTGTGCTATaGCCTGGCAACCCCCATCAC | + |
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Preference number: 2 (lower is better) Translates to: LQALRTSWASLFPTPRSSSRPVL*PGNPHH Trigger: GTGATGGGGGTTGCCAGGCCATAGCACAGGGCGGGA...ACTGCTGCGGGGCGTGGGGAAGAGAGAAGCCCAGGAAGTCCTCAAGGCCTGCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| 3UTR-3UTR CCA 90 bp | CTGCAGGCCTTGAGGACTTCCTGGGCTTCTCTCTTCCCCACGCCCCGCAGCAGTAGGTCACCCTCCCACTaGTCCCCAGGAGACCCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: LQALRTSWASLFPTPRSSRSPSH*SPGDPE Trigger: CTCTGGGTCTCCTGGGGACCAGTGGGAGGGTGACCT...ACTGCTGCGGGGCGTGGGGAAGAGAGAAGCCCAGGAAGTCCTCAAGGCCTGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| 3UTR-3UTR GCA 90 bp | GGGACTGCAGGCCTTGAGGACTTCCTGGGCTTCTCTCTTCCCCACGCCCCGCAGCAGGAGACCCAGAGATaGGAAGAAGGCAAGACCGTC | + |
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Preference number: 2 (lower is better) Translates to: GTAGLEDFLGFSLPHAPQQETQR*EEGKTV Trigger: GACGGTCTTGCCTTCTTCGCATCTCTGGGTCTCCTG...CTGCGGGGCGTGGGGAAGAGAGAAGCCCAGGAAGTCCTCAAGGCCTGCAGTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| 3UTR-3UTR CCA 90 bp | GGCAGGGCCCGGGGACTGCAGGCCTTGAGGACTTCCTGGGCTTCTCTCTTCCCCTTCACCTGGATTAGTTaGTGGGGTGGGGCACTTTGG | + |
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Preference number: 2 (lower is better) Translates to: GRARGLQALRTSWASLFPFTWIS*WGGALW Trigger: CCAAAGTGCCCCACCCCACCAACTAATCCAGGTGAA...GGGGAAGAGAGAAGCCCAGGAAGTCCTCAAGGCCTGCAGTCCCCGGGCCCTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| 3UTR CAA 90 bp | AGTGTAGGGATGGAGAAGAGGTTGGTCTGGGGCGTACCGGGTAGGTaGGGCGTGATTCCTAGTAGGGAGGGTGGGTGGGTAGGGGGAGAG | + |
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Preference number: 2 (lower is better) Translates to: SVGMEKRLVWGVPGR*GVIPSREGGWVGGE Trigger: CTCTCCCCCTACCCACCCACCCTCCCTACTAGGAATCACGCCCAACCTACCCGGTACGCCCCAGACCAACCTCTTCTCCATCCCTACACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| 3UTR-3UTR TCA 90 bp | GGATTGGGTATTCCAGTTACAGCCAGGTCACCCTCCCACTGGTCCCCAGGAGACGCCTGCCCACTGAAGTaGGGAGGTAACCAGCCTGGC | + |
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Preference number: 2 (lower is better) Translates to: GLGIPVTARSPSHWSPGDACPLK*GGNQPG Trigger: GCCAGGCTGGTTACCTCCTCACTTCAGTGGGCAGGC...GTCTCCTGGGGACCAGTGGGAGGGTGACCTGGCTGTAACTGGAATACCCAATCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| 3UTR-3UTR CCA 90 bp | GGGACTGCAGGCCTTGAGGACTTCCTGGGCTTCTCTCTTCCCCACGCCCCGCAGTCCTCTTTCCCTGCCTaGATGAAAGATGAAGGAGCC | + |
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Preference number: 2 (lower is better) Translates to: GTAGLEDFLGFSLPHAPQSSFPA*MKDEGA Trigger: GGCTCCTTCATCTTTCATCCAGGCAGGGAAAGAGGA...CTGCGGGGCGTGGGGAAGAGAGAAGCCCAGGAAGTCCTCAAGGCCTGCAGTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| 3UTR-3UTR CCA 90 bp | AACGGGAGCTGGATTGGGTATTCCAGTTACAGCCAGGTCACCCTCCCACTGGTCTGGGGTGGGGCACTTTaGACCCAGGGACTGGGAGAT | + |
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Preference number: 2 (lower is better) Translates to: NGSWIGYSSYSQVTLPLVWGGAL*TQGLGD Trigger: ATCTCCCAGTCCCTGGGTCCAAAGTGCCCCACCCCA...GACCAGTGGGAGGGTGACCTGGCTGTAACTGGAATACCCAATCCAGCTCCCGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| 3UTR-3UTR CCA 90 bp | GGAGCTGGATTGGGTATTCCAGTTACAGCCAGGTCACCCTCCCACTGGTCCCCAAGGGCGGTCTTCACCTaGATTAGTTGGTGGGGTGGG | + |
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Preference number: 2 (lower is better) Translates to: GAGLGIPVTARSPSHWSPRAVFT*ISWWGG Trigger: CCCACCCCACCAACTAATCCAGGTGAAGACCGCCCT...TGGGGACCAGTGGGAGGGTGACCTGGCTGTAACTGGAATACCCAATCCAGCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| 3UTR-3UTR CCA 90 bp | GGGACTGCAGGCCTTGAGGACTTCCTGGGCTTCTCTCTTCCCCACGCCCCGCAGGACCGTCCTTGTGAATaGAGCCTGAATTTACAGGTC | + |
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Preference number: 2 (lower is better) Translates to: GTAGLEDFLGFSLPHAPQDRPCE*SLNLQV Trigger: GACCTGTAAATTCAGGCTCCATTCACAAGGACGGTC...CTGCGGGGCGTGGGGAAGAGAGAAGCCCAGGAAGTCCTCAAGGCCTGCAGTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| 3UTR CAA 90 bp | GTTCCCAGCAGCCCTGTGAGATGTAGTGTAGGGATGGAGAAGAGGTaGGTCTGGGGCGTACCGGGTAGGTTGGGCGTGATTCCTAGTAGG | + |
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Preference number: 2 (lower is better) Translates to: VPSSPVRCSVGMEKR*VWGVPGRLGVIPSR Trigger: CCTACTAGGAATCACGCCCAACCTACCCGGTACGCCCCAGACCAACCTCTTCTCCATCCCTACACTACATCTCACAGGGCTGCTGGGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| 3UTR-3UTR CCA 90 bp | GGATTGGGTATTCCAGTTACAGCCAGGTCACCCTCCCACTGGTCCCCAGGAGACGGGACTGGGAGATTGTaGATAGAGACCCCGTGTATG | + |
|
Preference number: 2 (lower is better) Translates to: GLGIPVTARSPSHWSPGDGTGRL*IETPCM Trigger: CATACACGGGGTCTCTATCCACAATCTCCCAGTCCC...GTCTCCTGGGGACCAGTGGGAGGGTGACCTGGCTGTAACTGGAATACCCAATCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| 3UTR-3UTR CCA 90 bp | GGAGCTGGATTGGGTATTCCAGTTACAGCCAGGTCACCCTCCCACTGGTCCCCATTTGGACCCAGGGACTaGGAGATTGTGGATAGAGAC | + |
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Preference number: 2 (lower is better) Translates to: GAGLGIPVTARSPSHWSPFGPRD*EIVDRD Trigger: GTCTCTATCCACAATCTCCCAGTCCCTGGGTCCAAA...TGGGGACCAGTGGGAGGGTGACCTGGCTGTAACTGGAATACCCAATCCAGCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| 3UTR-3UTR GCA 90 bp | AAACATTCTCAGAGCTTTGTAAATGCACTTAGTGCTCAGACAGGCCTTGGCGAGGACTGGAGCGCCCTCTaGTGGAGACCCAGAAGGAAC | + |
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Preference number: 2 (lower is better) Translates to: KHSQSFVNALSAQTGLGEDWSAL*WRPRRN Trigger: GTTCCTTCTGGGTCTCCAGCAGAGGGCGCTCCAGTC...CTCGCCAAGGCCTGTCTGAGCACTAAGTGCATTTACAAAGCTCTGAGAATGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| 3UTR CCA 72 bp | GGGCGGGGCGCCCTGCTAGCTTCCCGCCCTGTGCTATaGCCTGGCAACCCCCATCACCCTGTCCGTGTGTCC | + |
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Preference number: 3 (lower is better) Translates to: GRGALLASRPVL*PGNPHHPVRVS Trigger: GGACACACGGACAGGGTGATGGGGGTTGCCAGGCCATAGCACAGGGCGGGAAGCTAGCAGGGCGCCCCGCCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| 3UTR CCA 72 bp | GCCTTGGCGAGATACAGTACCGCTTTCCGGAGCGCCTaGGGCCGGCAGGGCCCGGGGACTGCAGGCCTTGAG | + |
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Preference number: 3 (lower is better) Translates to: ALARYSTAFRSA*GRQGPGTAGLE Trigger: CTCAAGGCCTGCAGTCCCCGGGCCCTGCCGGCCCCAGGCGCTCCGGAAAGCGGTACTGTATCTCGCCAAGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| 3UTR CCA 72 bp | GGGCGCCCTGCTAGCTTCCCGCCCTGTGCTATGGCCTaGCAACCCCCATCACCCTGTCCGTGTGTCCGCAGG | + |
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Preference number: 3 (lower is better) Translates to: GRPASFPPCAMA*QPPSPCPCVRR Trigger: CCTGCGGACACACGGACAGGGTGATGGGGGTTGCCAGGCCATAGCACAGGGCGGGAAGCTAGCAGGGCGCCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| 3UTR GCA 72 bp | GATGAAGGAGCCTCGTGGCCAGCCTGGGACCCTCCCTaGTGCCTGGGGCAGCAAGCGGGAGAGGAAAGAAGC | + |
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Preference number: 3 (lower is better) Translates to: DEGASWPAWDPP*CLGQQAGEERS Trigger: GCTTCTTTCCTCTCCCGCTTGCTGCCCCAGGCAGCAGGGAGGGTCCCAGGCTGGCCACGAGGCTCCTTCATC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| 3UTR CCA 72 bp | CTGCCTGGGGCAGCAAGCGGGAGAGGAAAGAAGCCCTaGTGTGTGAGGTCAACCCGCCTGCCCACTGAAGTG | + |
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Preference number: 3 (lower is better) Translates to: LPGAASGRGKKP*CVRSTRLPTEV Trigger: CACTTCAGTGGGCAGGCGGGTTGACCTCACACACCAGGGCTTCTTTCCTCTCCCGCTTGCTGCCCCAGGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| 3UTR CCA 72 bp | TCTTTCCCTGCCTGGATGAAAGATGAAGGAGCCTCGTaGCCAGCCTGGGACCCTCCCTGCTGCCTGGGGCAG | + |
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Preference number: 3 (lower is better) Translates to: SFPAWMKDEGAS*PAWDPPCCLGQ Trigger: CTGCCCCAGGCAGCAGGGAGGGTCCCAGGCTGGCCACGAGGCTCCTTCATCTTTCATCCAGGCAGGGAAAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| 3UTR TCA 72 bp | TGGCAGAAGGTCCTCTTTCCCTGCCTGGATGAAAGATaGAGGAGCCTCGTGGCCAGCCTGGGACCCTCCCTG | + |
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Preference number: 3 (lower is better) Translates to: WQKVLFPCLDER*RSLVASLGPSL Trigger: CAGGGAGGGTCCCAGGCTGGCCACGAGGCTCCTTCATCTTTCATCCAGGCAGGGAAAGAGGACCTTCTGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| 3UTR CCA 72 bp | GGGTGGGGCACTTTGGACCCAGGGACTGGGAGATTGTaGATAGAGACCCCGTGTATGACACGGGATGACTGG | + |
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Preference number: 3 (lower is better) Translates to: GWGTLDPGTGRL*IETPCMTRDDW Trigger: CCAGTCATCCCGTGTCATACACGGGGTCTCTATCCACAATCTCCCAGTCCCTGGGTCCAAAGTGCCCCACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| 3UTR CCA 72 bp | TGTGGAGTCAGGGCGGTCTTCACCTGGATTAGTTGGTaGGGTGGGGCACTTTGGACCCAGGGACTGGGAGAT | + |
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Preference number: 3 (lower is better) Translates to: CGVRAVFTWISW*GGALWTQGLGD Trigger: ATCTCCCAGTCCCTGGGTCCAAAGTGCCCCACCCCACCAACTAATCCAGGTGAAGACCGCCCTGACTCCACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| 3UTR TCA 72 bp | TTCTTGTTGGCAGAAGGTCCTCTTTCCCTGCCTGGATaGAAGATGAAGGAGCCTCGTGGCCAGCCTGGGACC | + |
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Preference number: 3 (lower is better) Translates to: FLLAEGPLSLPG*KMKEPRGQPGT Trigger: GGTCCCAGGCTGGCCACGAGGCTCCTTCATCTTTCATCCAGGCAGGGAAAGAGGACCTTCTGCCAACAAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| 3UTR GCA 72 bp | ACCCCGTGTATGACACGGGATGACTGGAGCGCCCTCTaGTGGAGACCCAGAAGGAACTTCTTGTTGGCAGAA | + |
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Preference number: 3 (lower is better) Translates to: TPCMTRDDWSAL*WRPRRNFLLAE Trigger: TTCTGCCAACAAGAAGTTCCTTCTGGGTCTCCAGCAGAGGGCGCTCCAGTCATCCCGTGTCATACACGGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| 3UTR CCA 72 bp | CCGTGTATGACACGGGATGACTGGAGCGCCCTCTGCTaGAGACCCAGAAGGAACTTCTTGTTGGCAGAAGGT | + |
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Preference number: 3 (lower is better) Translates to: PCMTRDDWSALC*RPRRNFLLAEG Trigger: ACCTTCTGCCAACAAGAAGTTCCTTCTGGGTCTCCAGCAGAGGGCGCTCCAGTCATCCCGTGTCATACACGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| 3UTR CCA 72 bp | TTGTGGATAGAGACCCCGTGTATGACACGGGATGACTaGAGCGCCCTCTGCTGGAGACCCAGAAGGAACTTC | + |
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Preference number: 3 (lower is better) Translates to: LWIETPCMTRDD*SALCWRPRRNF Trigger: GAAGTTCCTTCTGGGTCTCCAGCAGAGGGCGCTCCAGTCATCCCGTGTCATACACGGGGTCTCTATCCACAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| 3UTR CCA 72 bp | TTGGGTATTCCAGTTACAGCCAGGTCACCCTCCCACTaGTCCCCAGGAGACCCAGAGATGCGAAGAAGGCAA | + |
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Preference number: 3 (lower is better) Translates to: LGIPVTARSPSH*SPGDPEMRRRQ Trigger: TTGCCTTCTTCGCATCTCTGGGTCTCCTGGGGACCAGTGGGAGGGTGACCTGGCTGTAACTGGAATACCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| 3UTR CCA 72 bp | GCGCCCTCTGCTGGAGACCCAGAAGGAACTTCTTGTTaGCAGAAGGTCCTCTTTCCCTGCCTGGATGAAAGA | + |
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Preference number: 3 (lower is better) Translates to: APSAGDPEGTSC*QKVLFPCLDER Trigger: TCTTTCATCCAGGCAGGGAAAGAGGACCTTCTGCCAACAAGAAGTTCCTTCTGGGTCTCCAGCAGAGGGCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| 3UTR CCA 72 bp | GTGAGATGTAGTGTAGGGATGGAGAAGAGGTTGGTCTaGGGCGTACCGGGTAGGTTGGGCGTGATTCCTAGT | + |
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Preference number: 3 (lower is better) Translates to: VRCSVGMEKRLV*GVPGRLGVIPS Trigger: ACTAGGAATCACGCCCAACCTACCCGGTACGCCCCAGACCAACCTCTTCTCCATCCCTACACTACATCTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| 3UTR-3UTR CAA 90 bp | AAACATTCTCAGAGCTTTGTAAATGCACTTAGTGCTCAGACAGGCCTTGGCGAGCCCAGAAGGAACTTCTaGTTGGCAGAAGGTCCTCTT | + |
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Preference number: 3 (lower is better) Translates to: KHSQSFVNALSAQTGLGEPRRNF*LAEGPL Trigger: AAGAGGACCTTCTGCCAACAAGAAGTTCCTTCTGGG...CTCGCCAAGGCCTGTCTGAGCACTAAGTGCATTTACAAAGCTCTGAGAATGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| CDS-3UTR TCA 90 bp | GGGCGGGCGGGGCGCCCTGCTAGCTTCCCGCCCTGTGCTATGGCCTGGCAACCCAGTACTGGCCCACGGTaGAGCTGCCGGGCAGCCCCA | + |
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Preference number: 4 (lower is better) Translates to: GRAGRPASFPPCAMAWQPSTGPR*SCRAAP Trigger: TGGGGCTGCCCGGCAGCTTCACCGTGGGCCAGTACT...GGGTTGCCAGGCCATAGCACAGGGCGGGAAGCTAGCAGGGCGCCCCGCCCGCCC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| CDS-3UTR CCA 90 bp | GGGCGGGCGGGGCGCCCTGCTAGCTTCCCGCCCTGTGCTATGGCCTGGCAACCCGCAGCACCCGGGGCCTaGCATTGCTGGTTGAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: GRAGRPASFPPCAMAWQPAAPGA*HCWLSW Trigger: CCAGCTCAACCAGCAATGCCAGGCCCCGGGTGCTGC...GGGTTGCCAGGCCATAGCACAGGGCGGGAAGCTAGCAGGGCGCCCCGCCCGCCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| CDS-3UTR TCA 90 bp | GACACAGGGCGGGCGGGGCGCCCTGCTAGCTTCCCGCCCTGTGCTATGGCCTGGAGGAGACGGCGGCCTTaGCGATGGCCAGAAGGCCCT | + |
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Preference number: 4 (lower is better) Translates to: DTGRAGRPASFPPCAMAWRRRRP*RWPEGP Trigger: AGGGCCTTCTGGCCATCGTCAAGGCCGCCGTCTCCT...CCAGGCCATAGCACAGGGCGGGAAGCTAGCAGGGCGCCCCGCCCGCCCTGTGTC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| CDS-3UTR CCA 90 bp | GGGCGGGCGGGGCGCCCTGCTAGCTTCCCGCCCTGTGCTATGGCCTGGCAACCCCAGGTGTTGGCCTGGTaGGTTCTGAGTCCTCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: GRAGRPASFPPCAMAWQPQVLAW*VLSPLQ Trigger: CTGCAGAGGACTCAGAACCCACCAGGCCAACACCTG...GGGTTGCCAGGCCATAGCACAGGGCGGGAAGCTAGCAGGGCGCCCCGCCCGCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| CDS-3UTR GCA 90 bp | GGGACTGCAGGCCTTGAGGACTTCCTGGGCTTCTCTCTTCCCCACGCCCCGCAGGGCGCAATGCCCACCTaGACGGTGGCCGGCGACAGT | + |
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Preference number: 4 (lower is better) Translates to: GTAGLEDFLGFSLPHAPQGAMPT*TVAGDS Trigger: ACTGTCGCCGGCCACCGTGCAGGTGGGCATTGCGCC...CTGCGGGGCGTGGGGAAGAGAGAAGCCCAGGAAGTCCTCAAGGCCTGCAGTCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| CDS-3UTR GCA 90 bp | GGGGGTAGTCCTGAGACCTCTGGGGGTGTGGAGTCAGGGCGGTCTTCACCTGGAGGTGGCAGTGGCTGCTaGAGGCAGGCTGGGCGGTGG | + |
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Preference number: 4 (lower is better) Translates to: GGSPETSGGVESGRSSPGGGSGC*RQAGRW Trigger: CCACCGCCCAGCCTGCCTGCAGCAGCCACTGCCACC...TCCAGGTGAAGACCGCCCTGACTCCACACCCCCAGAGGTCTCAGGACTACCCCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| CDS-3UTR GCA 90 bp | GACACAGGGCGGGCGGGGCGCCCTGCTAGCTTCCCGCCCTGTGCTATGGCCTGGGCAGATCCAGGCTCTTaGTTGGACAGGCCAGGTGTT | + |
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Preference number: 4 (lower is better) Translates to: DTGRAGRPASFPPCAMAWADPGS*LDRPGV Trigger: AACACCTGGCCTGTCCAAGCAAGAGCCTGGATCTGC...CCAGGCCATAGCACAGGGCGGGAAGCTAGCAGGGCGCCCCGCCCGCCCTGTGTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| CDS-3UTR CCA 90 bp | GGGACTGCAGGCCTTGAGGACTTCCTGGGCTTCTCTCTTCCCCACGCCCCGCAGAGGGCCCCAGGGTGCTaGGCACTGGGTAAGGCGCAA | + |
|
Preference number: 4 (lower is better) Translates to: GTAGLEDFLGFSLPHAPQRAPGC*ALGKAQ Trigger: TTGCGCCTTACCCAGTGCCCAGCACCCTGGGGCCCT...CTGCGGGGCGTGGGGAAGAGAGAAGCCCAGGAAGTCCTCAAGGCCTGCAGTCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
||
| CDS-3UTR GCA 90 bp | GGGACTGCAGGCCTTGAGGACTTCCTGGGCTTCTCTCTTCCCCACGCCCCGCAGCCCGGGGCCTGGCATTaGTGGTTGAGCTGGTACAGG | + |
|
Preference number: 4 (lower is better) Translates to: GTAGLEDFLGFSLPHAPQPGAWH*WLSWYR Trigger: CCTGTACCAGCTCAACCAGCAATGCCAGGCCCCGGG...CTGCGGGGCGTGGGGAAGAGAGAAGCCCAGGAAGTCCTCAAGGCCTGCAGTCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
||
| CDS-3UTR GCA 90 bp | GGCAGGGCCCGGGGACTGCAGGCCTTGAGGACTTCCTGGGCTTCTCTCTTCCCCCCTGGCTCAGTTCTGTaGCCTTCCGGCAGTCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GRARGLQALRTSWASLFPPGSVL*PSGSLA Trigger: TGCCAGACTGCCGGAAGGGCACAGAACTGAGCCAGG...GGGGAAGAGAGAAGCCCAGGAAGTCCTCAAGGCCTGCAGTCCCCGGGCCCTGCC 66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
||
| CDS-3UTR CCA 90 bp | GGGACTGCAGGCCTTGAGGACTTCCTGGGCTTCTCTCTTCCCCACGCCCCGCAGTCACAGAGGTGGCAGTaGCTGCTGCAGGCAGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GTAGLEDFLGFSLPHAPQSQRWQ*LLQAGW Trigger: CCAGCCTGCCTGCAGCAGCCACTGCCACCTCTGTGA...CTGCGGGGCGTGGGGAAGAGAGAAGCCCAGGAAGTCCTCAAGGCCTGCAGTCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
||
| CDS-3UTR CCA 90 bp | CTGCAGGCCTTGAGGACTTCCTGGGCTTCTCTCTTCCCCACGCCCCGCAGCAGTAGCCAGTGTCAGGGCTaGGGTGGCTCCCTGGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LQALRTSWASLFPTPRSSSQCQG*GGSLAQ Trigger: CTGAGCCAGGGAGCCACCCCAGCCCTGACACTGGCT...ACTGCTGCGGGGCGTGGGGAAGAGAGAAGCCCAGGAAGTCCTCAAGGCCTGCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
||
| CDS-3UTR CCA 90 bp | CCGGGTAGGTTGGGCGTGATTCCTAGTAGGGAGGGTGGGTGGGTAGGGGGAGAGCTCCCGGGCGGCTCCTaGTGCCAGCTCTGTCACTAC | + |
|
Preference number: 4 (lower is better) Translates to: PGRLGVIPSREGGWVGGELPGGS*CQLCHY Trigger: GTAGTGACAGAGCTGGCACCAGGAGCCGCCCGGGAG...CTCTCCCCCTACCCACCCACCCTCCCTACTAGGAATCACGCCCAACCTACCCGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
||
| CDS-3UTR TCA 90 bp | CCGGGTAGGTTGGGCGTGATTCCTAGTAGGGAGGGTGGGTGGGTAGGGGGAGAGTGGCCTGGTGGGTTCTaGGTCCTCTGCAGACAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PGRLGVIPSREGGWVGGEWPGGF*VLCRQA Trigger: GGCCTGTCTGCAGAGGACTCAGAACCCACCAGGCCA...CTCTCCCCCTACCCACCCACCCTCCCTACTAGGAATCACGCCCAACCTACCCGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
||
| CDS-3UTR CCA 90 bp | CTGCAGGCCTTGAGGACTTCCTGGGCTTCTCTCTTCCCCACGCCCCGCAGCAGTCAGGGTGCTGGGCACTaGGTAAGGCGCAATGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LQALRTSWASLFPTPRSSQGAGH*VRRNAH Trigger: GTGGGCATTGCGCCTTACCCAGTGCCCAGCACCCTG...ACTGCTGCGGGGCGTGGGGAAGAGAGAAGCCCAGGAAGTCCTCAAGGCCTGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
||
| CDS-3UTR CCA 90 bp | GCCCTGCTAGCTTCCCGCCCTGTGCTATGGCCTGGCAACCCCCATCACCCTGTCGAGGGATCACAGAGGTaGCAGTGGCTGCTGCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: ALLASRPVLWPGNPHHPVEGSQR*QWLLQA Trigger: TGCCTGCAGCAGCCACTGCCACCTCTGTGATCCCTC...GACAGGGTGATGGGGGTTGCCAGGCCATAGCACAGGGCGGGAAGCTAGCAGGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
||
| CDS-3UTR CCA 90 bp | GGGGCAGCAAGCGGGAGAGGAAAGAAGCCCTGGTGTGTGAGGTCAACCCGCCTGCTGGCAGACCGGCTGTaGCCGAGTAAGCCAGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GAASGRGKKPWCVRSTRLLADRL*PSKPGW Trigger: CCAACCTGGCTTACTCGGCCACAGCCGGTCTGCCAG...CAGGCGGGTTGACCTCACACACCAGGGCTTCTTTCCTCTCCCGCTTGCTGCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
||
| CDS-3UTR CCA 90 bp | GGGGGTAGTCCTGAGACCTCTGGGGGTGTGGAGTCAGGGCGGTCTTCACCTGGAACAGGTAGGCGGATGTaGGCGTGCTGGTGGTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GGSPETSGGVESGRSSPGTGRRM*ACWWSS Trigger: GCTGGACCACCAGCACGCCCACATCCGCCTACCTGT...TCCAGGTGAAGACCGCCCTGACTCCACACCCCCAGAGGTCTCAGGACTACCCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
||
| CDS-3UTR TCA 90 bp | GGGGGTAGTCCTGAGACCTCTGGGGGTGTGGAGTCAGGGCGGTCTTCACCTGGATGGTGTCGTAGCCATTaGCCGTGCGGCTCAGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GGSPETSGGVESGRSSPGWCRSH*PCGSGA Trigger: AGCACCTGAGCCGCACGGTCAATGGCTACGACACCA...TCCAGGTGAAGACCGCCCTGACTCCACACCCCCAGAGGTCTCAGGACTACCCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
||
| CDS-3UTR GCA 90 bp | AGGTCCTCTTTCCCTGCCTGGATGAAAGATGAAGGAGCCTCGTGGCCAGCCTGGCAGGCTGGGCGGTGGTaGAGGTGCCTCGGGTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: RSSFPAWMKDEGASWPAWQAGRW*RCLGWL Trigger: AAGCCACCCGAGGCACCTGCACCACCGCCCAGCCTG...CCAGGCTGGCCACGAGGCTCCTTCATCTTTCATCCAGGCAGGGAAAGAGGACCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
||
| CDS-3UTR CCA 90 bp | GGAGCTGGATTGGGTATTCCAGTTACAGCCAGGTCACCCTCCCACTGGTCCCCAGCCCTTCCGGCAGTCTaGCAGACCGGCTGTGGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: GAGLGIPVTARSPSHWSPALPAV*QTGCGR Trigger: TCGGCCACAGCCGGTCTGCCAGACTGCCGGAAGGGC...TGGGGACCAGTGGGAGGGTGACCTGGCTGTAACTGGAATACCCAATCCAGCTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
||
| CDS-3UTR CCA 90 bp | GGATTGGGTATTCCAGTTACAGCCAGGTCACCCTCCCACTGGTCCCCAGGAGACATGTGGGCGTGCTGGTaGTCCAGCAGCCGGGGCACG | + |
|
Preference number: 4 (lower is better) Translates to: GLGIPVTARSPSHWSPGDMWACW*SSSRGT Trigger: CGTGCCCCGGCTGCTGGACCACCAGCACGCCCACAT...GTCTCCTGGGGACCAGTGGGAGGGTGACCTGGCTGTAACTGGAATACCCAATCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
||
| CDS-3UTR TCA 90 bp | AGTCCTGAGACCTCTGGGGGTGTGGAGTCAGGGCGGTCTTCACCTGGATTAGTTGGCACAGCCACGCCCTaGCAGGCGCTTGGTGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SPETSGGVESGRSSPGLVGTATP*QALGAA Trigger: TGCTGCACCAAGCGCCTGTCAGGGCGTGGCTGTGCC...AACTAATCCAGGTGAAGACCGCCCTGACTCCACACCCCCAGAGGTCTCAGGACT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
||
| CDS-3UTR GCA 90 bp | AGTCCTGAGACCTCTGGGGGTGTGGAGTCAGGGCGGTCTTCACCTGGATTAGTTAGGCGGATGTGGGCGTaGTGGTGGTCCAGCAGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: SPETSGGVESGRSSPGLVRRMWA*WWSSSR Trigger: CCGGCTGCTGGACCACCAGCACGCCCACATCCGCCT...AACTAATCCAGGTGAAGACCGCCCTGACTCCACACCCCCAGAGGTCTCAGGACT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
||
| CDS-3UTR CCA 90 bp | AGGTCCTCTTTCCCTGCCTGGATGAAAGATGAAGGAGCCTCGTGGCCAGCCTGGTGCAGGTGCCTCGGGTaGCTTCGGGTAGGCCAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: RSSFPAWMKDEGASWPAWCRCLG*LRVGQG Trigger: CCCTTGGCCTACCCGAAGCCACCCGAGGCACCTGCA...CCAGGCTGGCCACGAGGCTCCTTCATCTTTCATCCAGGCAGGGAAAGAGGACCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
||
| CDS-3UTR CCA 90 bp | GGGGGTAGTCCTGAGACCTCTGGGGGTGTGGAGTCAGGGCGGTCTTCACCTGGATGGGGGTGGCTTCTGTaGCCACAGCAGGTAATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GGSPETSGGVESGRSSPGWGWLL*PQQVIQ Trigger: CTGGATTACCTGCTGTGGCCACAGAAGCCACCCCCA...TCCAGGTGAAGACCGCCCTGACTCCACACCCCCAGAGGTCTCAGGACTACCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
||
| CDS-3UTR CCA 90 bp | GGGGCAGCAAGCGGGAGAGGAAAGAAGCCCTGGTGTGTGAGGTCAACCCGCCTGAGATACTCCAGCGACTaGAGGCTGCTGCTCAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: GAASGRGKKPWCVRSTRLRYSSD*RLLLST Trigger: GGTGCTGAGCAGCAGCCTCCAGTCGCTGGAGTATCT...CAGGCGGGTTGACCTCACACACCAGGGCTTCTTTCCTCTCCCGCTTGCTGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
||
| CDS-3UTR GCA 90 bp | GGATTGGGTATTCCAGTTACAGCCAGGTCACCCTCCCACTGGTCCCCAGGAGACCCAGCGACTGGAGGCTaGTGCTCAGCACCGCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GLGIPVTARSPSHWSPGDPATGG*CSAPLC Trigger: ACACAGCGGTGCTGAGCAGCAGCCTCCAGTCGCTGG...GTCTCCTGGGGACCAGTGGGAGGGTGACCTGGCTGTAACTGGAATACCCAATCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
||
| CDS-3UTR CCA 90 bp | AGGTCCTCTTTCCCTGCCTGGATGAAAGATGAAGGAGCCTCGTGGCCAGCCTGGGTGTCAGGGCTGGGGTaGCTCCCTGGCTCAGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RSSFPAWMKDEGASWPAWVSGLG*LPGSVL Trigger: CAGAACTGAGCCAGGGAGCCACCCCAGCCCTGACAC...CCAGGCTGGCCACGAGGCTCCTTCATCTTTCATCCAGGCAGGGAAAGAGGACCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
||
| CDS-3UTR CCA 90 bp | AGTCCTGAGACCTCTGGGGGTGTGGAGTCAGGGCGGTCTTCACCTGGATTAGTTGGGGCAGCGAAGTACTaGCCCACGGTGAAGCTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: SPETSGGVESGRSSPGLVGAAKY*PTVKLP Trigger: CGGCAGCTTCACCGTGGGCCAGTACTTCGCTGCCCC...AACTAATCCAGGTGAAGACCGCCCTGACTCCACACCCCCAGAGGTCTCAGGACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
||
| CDS-3UTR CCA 90 bp | GCCCTGCTAGCTTCCCGCCCTGTGCTATGGCCTGGCAACCCCCATCACCCTGTCTACACACACTCTTGCTaGTCAGGCCCGAGAGTACGT | + |
|
Preference number: 4 (lower is better) Translates to: ALLASRPVLWPGNPHHPVYTHSC*SGPRVR Trigger: ACGTACTCTCGGGCCTGACCAGCAAGAGTGTGTGTA...GACAGGGTGATGGGGGTTGCCAGGCCATAGCACAGGGCGGGAAGCTAGCAGGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
||
| CDS-3UTR CCA 90 bp | GGCAGGGCCCGGGGACTGCAGGCCTTGAGGACTTCCTGGGCTTCTCTCTTCCCCTTCTTTGATGCAGGGTaGCCGGATGTCGTTGATGAG | + |
|
Preference number: 4 (lower is better) Translates to: GRARGLQALRTSWASLFPFFDAG*PDVVDE Trigger: CTCATCAACGACATCCGGCCACCCTGCATCAAAGAA...GGGGAAGAGAGAAGCCCAGGAAGTCCTCAAGGCCTGCAGTCCCCGGGCCCTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
||
| CDS-3UTR TCA 90 bp | CTGCAGGCCTTGAGGACTTCCTGGGCTTCTCTCTTCCCCACGCCCCGCAGCAGTCCTGGCATTGCTGGTTaGGCTGGTACAGGATGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: LQALRTSWASLFPTPRSSPGIAG*AGTGCY Trigger: ATAGCATCCTGTACCAGCTCAACCAGCAATGCCAGG...ACTGCTGCGGGGCGTGGGGAAGAGAGAAGCCCAGGAAGTCCTCAAGGCCTGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
||
| CDS-3UTR GCA 90 bp | GGCACTTTGGACCCAGGGACTGGGAGATTGTGGATAGAGACCCCGTGTATGACACTGGGTAAGGCGCAATaGCCACCTGCACGGTGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: GTLDPGTGRLWIETPCMTLGKAQ*PPARWP Trigger: CGGCCACCGTGCAGGTGGGCATTGCGCCTTACCCAG...TGTCATACACGGGGTCTCTATCCACAATCTCCCAGTCCCTGGGTCCAAAGTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
||
| CDS-3UTR GCA 90 bp | AGTCCTGAGACCTCTGGGGGTGTGGAGTCAGGGCGGTCTTCACCTGGATTAGTTCTGGGGACTGGGACTTaGCGGCTACGGTGCTGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: SPETSGGVESGRSSPGLVLGTGT*RLRCCY Trigger: GTAGCAGCACCGTAGCCGGCAAGTCCCAGTCCCCAG...AACTAATCCAGGTGAAGACCGCCCTGACTCCACACCCCCAGAGGTCTCAGGACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
||
| CDS-3UTR GCA 90 bp | GGGACTGCAGGCCTTGAGGACTTCCTGGGCTTCTCTCTTCCCCACGCCCCGCAGTGTTACACACACTCTTaGTGGTCAGGCCCGAGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: GTAGLEDFLGFSLPHAPQCYTHS*WSGPRV Trigger: TACTCTCGGGCCTGACCAGCAAGAGTGTGTGTAACA...CTGCGGGGCGTGGGGAAGAGAGAAGCCCAGGAAGTCCTCAAGGCCTGCAGTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
||
| CDS-3UTR CCA 90 bp | GGAGCTGGATTGGGTATTCCAGTTACAGCCAGGTCACCCTCCCACTGGTCCCCACCGAGTAAGCCAGGTTaGGAAAGCTGGGGACTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GAGLGIPVTARSPSHWSPPSKPG*ESWGLG Trigger: GCCCAGTCCCCAGCTTTCCCAACCTGGCTTACTCGG...TGGGGACCAGTGGGAGGGTGACCTGGCTGTAACTGGAATACCCAATCCAGCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
||
| 3UTR CAA 72 bp | ATGGAGAAGAGGTTGGTCTGGGGCGTACCGGGTAGGTaGGGCGTGATTCCTAGTAGGGAGGGTGGGTGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: MEKRLVWGVPGR*GVIPSREGGWV Trigger: TACCCACCCACCCTCCCTACTAGGAATCACGCCCAACCTACCCGGTACGCCCCAGACCAACCTCTTCTCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
||
| CDS-3UTR CCA 90 bp | CCAGAAGGAACTTCTTGTTGGCAGAAGGTCCTCTTTCCCTGCCTGGATGAAAGAGCCCTGACAGGCGCTTaGTGCAGCACCCGGGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PEGTSCWQKVLFPCLDERALTGA*CSTRGL Trigger: CAGGCCCCGGGTGCTGCACCAAGCGCCTGTCAGGGC...TCTTTCATCCAGGCAGGGAAAGAGGACCTTCTGCCAACAAGAAGTTCCTTCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
||
| CDS-3UTR CCA 90 bp | GGCACTTTGGACCCAGGGACTGGGAGATTGTGGATAGAGACCCCGTGTATGACAACCCTGCAGGTTTGGTaGCCCCAGCCAGTGTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GTLDPGTGRLWIETPCMTTLQVW*PQPVSG Trigger: CCCTGACACTGGCTGGGGCCACCAAACCTGCAGGGT...TGTCATACACGGGGTCTCTATCCACAATCTCCCAGTCCCTGGGTCCAAAGTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
||
| CDS-3UTR GCA 90 bp | GGATTGGGTATTCCAGTTACAGCCAGGTCACCCTCCCACTGGTCCCCAGGAGACCCACTGACTCACACTTaGGCAGATCCAGGCTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: GLGIPVTARSPSHWSPGDPLTHT*ADPGSC Trigger: GCAAGAGCCTGGATCTGCGCAAGTGTGAGTCAGTGG...GTCTCCTGGGGACCAGTGGGAGGGTGACCTGGCTGTAACTGGAATACCCAATCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
||
| CDS-3UTR GCA 90 bp | AGTCCTGAGACCTCTGGGGGTGTGGAGTCAGGGCGGTCTTCACCTGGATTAGTTCTCAGGTGCTTGTGCTaGGGCACTCGGATGTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SPETSGGVESGRSSPGLVLRCLC*GTRMLV Trigger: CACCAACATCCGAGTGCCGCAGCACAAGCACCTGAG...AACTAATCCAGGTGAAGACCGCCCTGACTCCACACCCCCAGAGGTCTCAGGACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
||
| CDS-3UTR CCA 90 bp | AACGGGAGCTGGATTGGGTATTCCAGTTACAGCCAGGTCACCCTCCCACTGGTCGGGGCCTGGCATTGCTaGTTGAGCTGGTACAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: NGSWIGYSSYSQVTLPLVGAWHC*LSWYRM Trigger: CATCCTGTACCAGCTCAACCAGCAATGCCAGGCCCC...GACCAGTGGGAGGGTGACCTGGCTGTAACTGGAATACCCAATCCAGCTCCCGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
||
| CDS-3UTR CCA 90 bp | AGTCCTGAGACCTCTGGGGGTGTGGAGTCAGGGCGGTCTTCACCTGGATTAGTTGGGAAAGCTGGGGACTaGGCCATGCTTAGCTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: SPETSGGVESGRSSPGLVGKAGD*AMLSWT Trigger: AGTCCAGCTAAGCATGGCCCAGTCCCCAGCTTTCCC...AACTAATCCAGGTGAAGACCGCCCTGACTCCACACCCCCAGAGGTCTCAGGACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
||
| CDS-3UTR TCA 90 bp | GGCACTTTGGACCCAGGGACTGGGAGATTGTGGATAGAGACCCCGTGTATGACATGGTGGGGAAGATCTTaGTGGACAGGGGACTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GTLDPGTGRLWIETPCMTWWGRS*WTGDCW Trigger: CCAACAGTCCCCTGTCCATCAAGATCTTCCCCACCA...TGTCATACACGGGGTCTCTATCCACAATCTCCCAGTCCCTGGGTCCAAAGTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
||
| CDS-3UTR GCA 90 bp | AGTCCTGAGACCTCTGGGGGTGTGGAGTCAGGGCGGTCTTCACCTGGATTAGTTATCCAGGCCACCTTCTaGATACCCTGCAGGTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SPETSGGVESGRSSPGLVIQATF*IPCRFG Trigger: ACCAAACCTGCAGGGTATGCAGAAGGTGGCCTGGAT...AACTAATCCAGGTGAAGACCGCCCTGACTCCACACCCCCAGAGGTCTCAGGACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
||
| CDS-3UTR CCA 90 bp | AACGGGAGCTGGATTGGGTATTCCAGTTACAGCCAGGTCACCCTCCCACTGGTCTACGGCAGCAGCTGCTaGATTGTAGCAGTCACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: NGSWIGYSSYSQVTLPLVYGSSC*IVAVTG Trigger: ACCAGTGACTGCTACAATCCAGCAGCTGCTGCCGTA...GACCAGTGGGAGGGTGACCTGGCTGTAACTGGAATACCCAATCCAGCTCCCGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
||
| CDS-3UTR CCA 90 bp | CCAGAAGGAACTTCTTGTTGGCAGAAGGTCCTCTTTCCCTGCCTGGATGAAAGAATCCAGGCTCTTGCTTaGACAGGCCAGGTGTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PEGTSCWQKVLFPCLDERIQALA*TGQVLA Trigger: GGCCAACACCTGGCCTGTCCAAGCAAGAGCCTGGAT...TCTTTCATCCAGGCAGGGAAAGAGGACCTTCTGCCAACAAGAAGTTCCTTCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
||
| CDS-3UTR CCA 90 bp | GGATTGGGTATTCCAGTTACAGCCAGGTCACCCTCCCACTGGTCCCCAGGAGACCATTGCTGGTTGAGCTaGTACAGGATGCTATGGATA | + |
|
Preference number: 4 (lower is better) Translates to: GLGIPVTARSPSHWSPGDHCWLS*YRMLWI Trigger: TATCCATAGCATCCTGTACCAGCTCAACCAGCAATG...GTCTCCTGGGGACCAGTGGGAGGGTGACCTGGCTGTAACTGGAATACCCAATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
||
| CDS-3UTR CCA 90 bp | CTGCTGGAGACCCAGAAGGAACTTCTTGTTGGCAGAAGGTCCTCTTTCCCTGCCTGGTACAGGATGCTATaGATAGAGGGTAGGTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LLETQKELLVGRRSSFPAWYRML*IEGRLE Trigger: CTCCAACCTACCCTCTATCCATAGCATCCTGTACCA...GGCAGGGAAAGAGGACCTTCTGCCAACAAGAAGTTCCTTCTGGGTCTCCAGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
||
| CDS CCA 90 bp | CAGGTGCCTCGGGTGGCTTCGGGTAGGCCAAGGGCCCCAGGGTGCTaGGCACTGGGTAAGGCGCAATGCCCACCTGCACGGTGGCCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: QVPRVASGRPRAPGC*ALGKAQCPPARWPA Trigger: CGCCGGCCACCGTGCAGGTGGGCATTGCGCCTTACCCAGTGCCCAGCACCCTGGGGCCCTTGGCCTACCCGAAGCCACCCGAGGCACCTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
||
| CDS TCA 90 bp | TGGGGTGGCCGGCGGGCGCATGAGCACTCGAGGAGACGGCGGCCTTaGCGATGGCCAGAAGGCCCTGGTAGCCGGCGGTGTGCTGAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: WGGRRAHEHSRRRRP*RWPEGPGSRRCAEG Trigger: ACCCTCAGCACACCGCCGGCTACCAGGGCCTTCTGGCCATCGTCAAGGCCGCCGTCTCCTCGAGTGCTCATGCGCCCGCCGGCCACCCCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
||
| CDS-3UTR CAA 90 bp | GGGCGGGCGGGGCGCCCTGCTAGCTTCCCGCCCTGTGCTATGGCCTGGCAACCCGATCCAGGCTCTTGCTaGGACAGGCCAGGTGTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: GRAGRPASFPPCAMAWQPDPGSC*DRPGVG Trigger: GCCAACACCTGGCCTGTCCAAGCAAGAGCCTGGATC...GGGTTGCCAGGCCATAGCACAGGGCGGGAAGCTAGCAGGGCGCCCCGCCCGCCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
||
| CDS-3UTR CAA 90 bp | GGGCGGGCGGGGCGCCCTGCTAGCTTCCCGCCCTGTGCTATGGCCTGGCAACCCTTGCCCTCCACACTCTaGAGCACGCTTTTGGGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: GRAGRPASFPPCAMAWQPLPSTL*STLLGW Trigger: CCACCCCAAAAGCGTGCTCAAGAGTGTGGAGGGCAA...GGGTTGCCAGGCCATAGCACAGGGCGGGAAGCTAGCAGGGCGCCCCGCCCGCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| CDS-3UTR CAA 90 bp | GGGCGGGCGGGGCGCCCTGCTAGCTTCCCGCCCTGTGCTATGGCCTGGCAACCCGGTGGCCGGATGTCGTaGATGAGATACTCCAGCGAC | + |
|
Preference number: 5 (lower is better) Translates to: GRAGRPASFPPCAMAWQPGGRMS*MRYSSD Trigger: GTCGCTGGAGTATCTCATCAACGACATCCGGCCACC...GGGTTGCCAGGCCATAGCACAGGGCGGGAAGCTAGCAGGGCGCCCCGCCCGCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| CDS TCA 90 bp | CCCTCCACACTCTTGAGCACGCTTTTGGGGTGGCCGGCGGGCGCATaGGCACTCGAGGAGACGGCGGCCTTGACGATGGCCAGAAGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: PSTLLSTLLGWPAGA*ALEETAALTMARRP Trigger: GGGCCTTCTGGCCATCGTCAAGGCCGCCGTCTCCTCGAGTGCTCATGCGCCCGCCGGCCACCCCAAAAGCGTGCTCAAGAGTGTGGAGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| CDS CCA 90 bp | TACTGGCCCACGGTGAAGCTGCCGGGCAGCCCCATTCCGCAGTTGTaGGGCGACCCGTTGGCCCTTTCGAAGGCCCTCCCGCCACAAATC | + |
|
Preference number: 5 (lower is better) Translates to: YWPTVKLPGSPIPQL*GDPLALSKALPPQI Trigger: GATTTGTGGCGGGAGGGCCTTCGAAAGGGCCAACGGGTCGCCCCACAACTGCGGAATGGGGCTGCCCGGCAGCTTCACCGTGGGCCAGTA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| CDS-3UTR CAA 90 bp | GACACAGGGCGGGCGGGGCGCCCTGCTAGCTTCCCGCCCTGTGCTATGGCCTGGGCCTGGCATTGCTGGTaGAGCTGGTACAGGATGCTA | + |
|
Preference number: 5 (lower is better) Translates to: DTGRAGRPASFPPCAMAWAWHCW*SWYRML Trigger: TAGCATCCTGTACCAGCTCAACCAGCAATGCCAGGC...CCAGGCCATAGCACAGGGCGGGAAGCTAGCAGGGCGCCCCGCCCGCCCTGTGTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| CDS TCA 90 bp | GCTGAGGGTAGGGGCTGTAACGCTGGCCGCTGGTGTCGTAGCCATTaGCCGTGCGGCTCAGGTGCTTGTGCTGCGGCACTCGGATGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: AEGRGCNAGRWCRSH*PCGSGACAAALGCW Trigger: CCAACATCCGAGTGCCGCAGCACAAGCACCTGAGCCGCACGGTCAATGGCTACGACACCAGCGGCCAGCGTTACAGCCCCTACCCTCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| CDS GCA 90 bp | GCGACTGGAGGCTGCTGCTCAGCACCGCTGTGTTACACACACTCTTaGTGGTCAGGCCCGAGAGTACGTCTCCAGGAGGCCCGGCTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: ATGGCCSAPLCYTHS*WSGPRVRLQEARLA Trigger: AGCTAGCCGGGCCTCCTGGAGACGTACTCTCGGGCCTGACCAGCAAGAGTGTGTGTAACACAGCGGTGCTGAGCAGCAGCCTCCAGTCGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| CDS CCA 90 bp | ACTGGAGGCTGCTGCTCAGCACCGCTGTGTTACACACACTCTTGCTaGTCAGGCCCGAGAGTACGTCTCCAGGAGGCCCGGCTAGCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: TGGCCSAPLCYTHSC*SGPRVRLQEARLAP Trigger: GGGAGCTAGCCGGGCCTCCTGGAGACGTACTCTCGGGCCTGACCAGCAAGAGTGTGTGTAACACAGCGGTGCTGAGCAGCAGCCTCCAGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| CDS-3UTR CAA 90 bp | GGATTGGGTATTCCAGTTACAGCCAGGTCACCCTCCCACTGGTCCCCAGGAGACGAGGAGACGGCGGCCTaGACGATGGCCAGAAGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: GLGIPVTARSPSHWSPGDEETAA*TMARRP Trigger: GGGCCTTCTGGCCATCGTCAAGGCCGCCGTCTCCTC...GTCTCCTGGGGACCAGTGGGAGGGTGACCTGGCTGTAACTGGAATACCCAATCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| CDS-3UTR CAA 90 bp | GGCAGGGCCCGGGGACTGCAGGCCTTGAGGACTTCCTGGGCTTCTCTCTTCCCCGTGTTACACACACTCTaGCTGGTCAGGCCCGAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: GRARGLQALRTSWASLFPVLHTL*LVRPES Trigger: ACTCTCGGGCCTGACCAGCAAGAGTGTGTGTAACAC...GGGGAAGAGAGAAGCCCAGGAAGTCCTCAAGGCCTGCAGTCCCCGGGCCCTGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| CDS-3UTR CAA 90 bp | GCCCTGCTAGCTTCCCGCCCTGTGCTATGGCCTGGCAACCCCCATCACCCTGTCCCCAGCATCTGTTCTTaGATGCAGGGTGGCCGGATG | + |
|
Preference number: 5 (lower is better) Translates to: ALLASRPVLWPGNPHHPVPSICS*MQGGRM Trigger: CATCCGGCCACCCTGCATCAAAGAACAGATGCTGGG...GACAGGGTGATGGGGGTTGCCAGGCCATAGCACAGGGCGGGAAGCTAGCAGGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| CDS CCA 90 bp | CTGGTAGGTGTCACCAGAACACTGTTCCAAGGGGCAGCGAAGTACTaGCCCACGGTGAAGCTGCCGGGCAGCCCCATTCCGCAGTTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: LVGVTRTLFQGAAKY*PTVKLPGSPIPQLW Trigger: CCACAACTGCGGAATGGGGCTGCCCGGCAGCTTCACCGTGGGCCAGTACTTCGCTGCCCCTTGGAACAGTGTTCTGGTGACACCTACCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| CDS-3UTR CAA 90 bp | GGGAGCTGGATTGGGTATTCCAGTTACAGCCAGGTCACCCTCCCACTGGTCCCCACCCGGGGCCTGGCATaGCTGGTTGAGCTGGTACAG | + |
|
Preference number: 5 (lower is better) Translates to: GSWIGYSSYSQVTLPLVPTRGLA*LVELVQ Trigger: CTGTACCAGCTCAACCAGCAATGCCAGGCCCCGGGT...GGGGACCAGTGGGAGGGTGACCTGGCTGTAACTGGAATACCCAATCCAGCTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| CDS-3UTR CAA 90 bp | GGGAGCTGGATTGGGTATTCCAGTTACAGCCAGGTCACCCTCCCACTGGTCCCCCGCAGATCCAGGCTCTaGCTTGGACAGGCCAGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: GSWIGYSSYSQVTLPLVPRRSRL*LGQARC Trigger: ACACCTGGCCTGTCCAAGCAAGAGCCTGGATCTGCG...GGGGACCAGTGGGAGGGTGACCTGGCTGTAACTGGAATACCCAATCCAGCTCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| CDS-3UTR CAA 90 bp | GCCCTGCTAGCTTCCCGCCCTGTGCTATGGCCTGGCAACCCCCATCACCCTGTCTTGGTGGGGAAGATCTaGATGGACAGGGGACTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: ALLASRPVLWPGNPHHPVLVGKI*MDRGLL Trigger: CAACAGTCCCCTGTCCATCAAGATCTTCCCCACCAA...GACAGGGTGATGGGGGTTGCCAGGCCATAGCACAGGGCGGGAAGCTAGCAGGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| CDS GCA 90 bp | CTCCCGGGCGGCTCCTGGTGCCAGCTCTGTCACTACGGCAGCAGCTaGTGGATTGTAGCAGTCACTGGTAGGTGTCACCAGAACACTGTT | + |
|
Preference number: 5 (lower is better) Translates to: LPGGSWCQLCHYGSS*WIVAVTGRCHQNTV Trigger: AACAGTGTTCTGGTGACACCTACCAGTGACTGCTACAATCCAGCAGCTGCTGCCGTAGTGACAGAGCTGGCACCAGGAGCCGCCCGGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| CDS-3UTR CAA 90 bp | AACGGGAGCTGGATTGGGTATTCCAGTTACAGCCAGGTCACCCTCCCACTGGTCGCATACCCTGCAGGTTaGGTGGCCCCAGCCAGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: NGSWIGYSSYSQVTLPLVAYPAG*VAPASV Trigger: GACACTGGCTGGGGCCACCAAACCTGCAGGGTATGC...GACCAGTGGGAGGGTGACCTGGCTGTAACTGGAATACCCAATCCAGCTCCCGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| CDS-3UTR CAA 90 bp | AACGGGAGCTGGATTGGGTATTCCAGTTACAGCCAGGTCACCCTCCCACTGGTCTCTGGGGACTGGGACTaGCCGGCTACGGTGCTGCTA | + |
|
Preference number: 5 (lower is better) Translates to: NGSWIGYSSYSQVTLPLVSGDWD*PATVLL Trigger: TAGCAGCACCGTAGCCGGCAAGTCCCAGTCCCCAGA...GACCAGTGGGAGGGTGACCTGGCTGTAACTGGAATACCCAATCCAGCTCCCGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| CDS-3UTR CAA 90 bp | GGAGCTGGATTGGGTATTCCAGTTACAGCCAGGTCACCCTCCCACTGGTCCCCAGCCACTGACTCACACTaGCGCAGATCCAGGCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GAGLGIPVTARSPSHWSPATDSH*RRSRLL Trigger: CAAGAGCCTGGATCTGCGCAAGTGTGAGTCAGTGGC...TGGGGACCAGTGGGAGGGTGACCTGGCTGTAACTGGAATACCCAATCCAGCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| CDS CCA 90 bp | TTGATGCAGGGTGGCCGGATGTCGTTGATGAGATACTCCAGCGACTaGAGGCTGCTGCTCAGCACCGCTGTGTTACACACACTCTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LMQGGRMSLMRYSSD*RLLLSTAVLHTLLL Trigger: CAGCAAGAGTGTGTGTAACACAGCGGTGCTGAGCAGCAGCCTCCAGTCGCTGGAGTATCTCATCAACGACATCCGGCCACCCTGCATCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| CDS CCA 90 bp | CACCGTCTCGTAACCCTTACCCAGCATCTGTTCTTTGATGCAGGGTaGCCGGATGTCGTTGATGAGATACTCCAGCGACTGGAGGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: HRLVTLTQHLFFDAG*PDVVDEILQRLEAA Trigger: AGCAGCCTCCAGTCGCTGGAGTATCTCATCAACGACATCCGGCCACCCTGCATCAAAGAACAGATGCTGGGTAAGGGTTACGAGACGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| CDS CCA 72 bp | TGCAGGCAGGCTGGGCGGTGGTGCAGGTGCCTCGGGTaGCTTCGGGTAGGCCAAGGGCCCCAGGGTGCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: CRQAGRWCRCLG*LRVGQGPQGAG Trigger: CCCAGCACCCTGGGGCCCTTGGCCTACCCGAAGCCACCCGAGGCACCTGCACCACCGCCCAGCCTGCCTGCA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| CDS TCA 72 bp | CGGCGGGCGCATGAGCACTCGAGGAGACGGCGGCCTTaGCGATGGCCAGAAGGCCCTGGTAGCCGGCGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: RRAHEHSRRRRP*RWPEGPGSRRC Trigger: ACACCGCCGGCTACCAGGGCCTTCTGGCCATCGTCAAGGCCGCCGTCTCCTCGAGTGCTCATGCGCCCGCCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| CDS CCA 72 bp | CTTCGGGTAGGCCAAGGGCCCCAGGGTGCTGGGCACTaGGTAAGGCGCAATGCCCACCTGCACGGTGGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: LRVGQGPQGAGH*VRRNAHLHGGR Trigger: CCGGCCACCGTGCAGGTGGGCATTGCGCCTTACCCAGTGCCCAGCACCCTGGGGCCCTTGGCCTACCCGAAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| CDS CCA 72 bp | CGGGTGGCTTCGGGTAGGCCAAGGGCCCCAGGGTGCTaGGCACTGGGTAAGGCGCAATGCCCACCTGCACGG | + |
|
Preference number: 6 (lower is better) Translates to: RVASGRPRAPGC*ALGKAQCPPAR Trigger: CCGTGCAGGTGGGCATTGCGCCTTACCCAGTGCCCAGCACCCTGGGGCCCTTGGCCTACCCGAAGCCACCCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| CDS GCA 72 bp | GTGTCAGGGCTGGGGTGGCTCCCTGGCTCAGTTCTGTaGCCTTCCGGCAGTCTGGCAGACCGGCTGTGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: VSGLGWLPGSVL*PSGSLADRLWP Trigger: CGGCCACAGCCGGTCTGCCAGACTGCCGGAAGGGCACAGAACTGAGCCAGGGAGCCACCCCAGCCCTGACAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| CDS CCA 72 bp | ACGGTGAAGCTGCCGGGCAGCCCCATTCCGCAGTTGTaGGGCGACCCGTTGGCCCTTTCGAAGGCCCTCCCG | + |
|
Preference number: 6 (lower is better) Translates to: TVKLPGSPIPQL*GDPLALSKALP Trigger: CGGGAGGGCCTTCGAAAGGGCCAACGGGTCGCCCCACAACTGCGGAATGGGGCTGCCCGGCAGCTTCACCGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| CDS CAA 72 bp | CCCACGGTGAAGCTGCCGGGCAGCCCCATTCCGCAGTaGTGGGGCGACCCGTTGGCCCTTTCGAAGGCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: PTVKLPGSPIPQ*WGDPLALSKAL Trigger: GAGGGCCTTCGAAAGGGCCAACGGGTCGCCCCACAACTGCGGAATGGGGCTGCCCGGCAGCTTCACCGTGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| CDS CAA 90 bp | GGCGCAATGCCCACCTGCACGGTGGCCGGCGACAGTTTAGTCCGCTaGCCCTCCACACTCTTGAGCACGCTTTTGGGGTGGCCGGCGGGC | + |
|
Preference number: 6 (lower is better) Translates to: GAMPTCTVAGDSLVR*PSTLLSTLLGWPAG Trigger: GCCCGCCGGCCACCCCAAAAGCGTGCTCAAGAGTGTGGAGGGCAAGCGGACTAAACTGTCGCCGGCCACCGTGCAGGTGGGCATTGCGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| CDS TCA 72 bp | CTCTTGAGCACGCTTTTGGGGTGGCCGGCGGGCGCATaGGCACTCGAGGAGACGGCGGCCTTGACGATGGCC | + |
|
Preference number: 6 (lower is better) Translates to: LLSTLLGWPAGA*ALEETAALTMA Trigger: GGCCATCGTCAAGGCCGCCGTCTCCTCGAGTGCTCATGCGCCCGCCGGCCACCCCAAAAGCGTGCTCAAGAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| CDS CAA 90 bp | AAGTACTGGCCCACGGTGAAGCTGCCGGGCAGCCCCATTCCGCAGTaGTGGGGCGACCCGTTGGCCCTTTCGAAGGCCCTCCCGCCACAA | + |
|
Preference number: 6 (lower is better) Translates to: KYWPTVKLPGSPIPQ*WGDPLALSKALPPQ Trigger: TTGTGGCGGGAGGGCCTTCGAAAGGGCCAACGGGTCGCCCCACAACTGCGGAATGGGGCTGCCCGGCAGCTTCACCGTGGGCCAGTACTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| CDS CCA 72 bp | CGGGCAGCCCCATTCCGCAGTTGTGGGGCGACCCGTTaGCCCTTTCGAAGGCCCTCCCGCCACAAATCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: RAAPFRSCGATR*PFRRPSRHKSL Trigger: CAGAGATTTGTGGCGGGAGGGCCTTCGAAAGGGCCAACGGGTCGCCCCACAACTGCGGAATGGGGCTGCCCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| CDS CAA 72 bp | CCGGGCAGCCCCATTCCGCAGTTGTGGGGCGACCCGTaGGCCCTTTCGAAGGCCCTCCCGCCACAAATCTCT | + |
|
Preference number: 6 (lower is better) Translates to: PGSPIPQLWGDP*ALSKALPPQIS Trigger: AGAGATTTGTGGCGGGAGGGCCTTCGAAAGGGCCAACGGGTCGCCCCACAACTGCGGAATGGGGCTGCCCGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| CDS TCA 72 bp | AGGGGCTGTAACGCTGGCCGCTGGTGTCGTAGCCATTaGCCGTGCGGCTCAGGTGCTTGTGCTGCGGCACTC | + |
|
Preference number: 6 (lower is better) Translates to: RGCNAGRWCRSH*PCGSGACAAAL Trigger: GAGTGCCGCAGCACAAGCACCTGAGCCGCACGGTCAATGGCTACGACACCAGCGGCCAGCGTTACAGCCCCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| CDS TCA 72 bp | CACTGTTCCAAGGGGCAGCGAAGTACTGGCCCACGGTaGAGCTGCCGGGCAGCCCCATTCCGCAGTTGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: HCSKGQRSTGPR*SCRAAPFRSCG Trigger: CCCACAACTGCGGAATGGGGCTGCCCGGCAGCTTCACCGTGGGCCAGTACTTCGCTGCCCCTTGGAACAGTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| CDS CCA 72 bp | GTTCTGTGCCCTTCCGGCAGTCTGGCAGACCGGCTGTaGCCGAGTAAGCCAGGTTGGGAAAGCTGGGGACTG | + |
|
Preference number: 6 (lower is better) Translates to: VLCPSGSLADRL*PSKPGWESWGL Trigger: CAGTCCCCAGCTTTCCCAACCTGGCTTACTCGGCCACAGCCGGTCTGCCAGACTGCCGGAAGGGCACAGAAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| CDS CCA 72 bp | GTCACCAGAACACTGTTCCAAGGGGCAGCGAAGTACTaGCCCACGGTGAAGCTGCCGGGCAGCCCCATTCCG | + |
|
Preference number: 6 (lower is better) Translates to: VTRTLFQGAAKY*PTVKLPGSPIP Trigger: CGGAATGGGGCTGCCCGGCAGCTTCACCGTGGGCCAGTACTTCGCTGCCCCTTGGAACAGTGTTCTGGTGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| CDS CAA 72 bp | CCCACCTGCACGGTGGCCGGCGACAGTTTAGTCCGCTaGCCCTCCACACTCTTGAGCACGCTTTTGGGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: PTCTVAGDSLVR*PSTLLSTLLGW Trigger: CCACCCCAAAAGCGTGCTCAAGAGTGTGGAGGGCAAGCGGACTAAACTGTCGCCGGCCACCGTGCAGGTGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| CDS CAA 90 bp | AGCGACTGGAGGCTGCTGCTCAGCACCGCTGTGTTACACACACTCTaGCTGGTCAGGCCCGAGAGTACGTCTCCAGGAGGCCCGGCTAGC | + |
|
Preference number: 6 (lower is better) Translates to: SDWRLLLSTAVLHTL*LVRPESTSPGGPAS Trigger: GCTAGCCGGGCCTCCTGGAGACGTACTCTCGGGCCTGACCAGCAAGAGTGTGTGTAACACAGCGGTGCTGAGCAGCAGCCTCCAGTCGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| CDS GCA 72 bp | GGCTGCTGCTCAGCACCGCTGTGTTACACACACTCTTaGTGGTCAGGCCCGAGAGTACGTCTCCAGGAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: GCCSAPLCYTHS*WSGPRVRLQEA Trigger: GGCCTCCTGGAGACGTACTCTCGGGCCTGACCAGCAAGAGTGTGTGTAACACAGCGGTGCTGAGCAGCAGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| CDS CCA 72 bp | GTTGGCTACCTTCTCCGCGTAGGCATCCAGCTCCGCTaGGCTAGGGTAGCGCGAGGAATGCATAGAGCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: VGYLLRVGIQLR*ARVARGMHRAG Trigger: GCCAGCTCTATGCATTCCTCGCGCTACCCTAGCCCAGCGGAGCTGGATGCCTACGCGGAGAAGGTAGCCAAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| CDS CCA 72 bp | TGCTGCTCAGCACCGCTGTGTTACACACACTCTTGCTaGTCAGGCCCGAGAGTACGTCTCCAGGAGGCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: CCSAPLCYTHSC*SGPRVRLQEAR Trigger: CCGGGCCTCCTGGAGACGTACTCTCGGGCCTGACCAGCAAGAGTGTGTGTAACACAGCGGTGCTGAGCAGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| CDS CCA 72 bp | CAGGCGCTTGGTGCAGCACCCGGGGCCTGGCATTGCTaGTTGAGCTGGTACAGGATGCTATGGATAGAGGGT | + |
|
Preference number: 6 (lower is better) Translates to: QALGAAPGAWHC*LSWYRMLWIEG Trigger: ACCCTCTATCCATAGCATCCTGTACCAGCTCAACCAGCAATGCCAGGCCCCGGGTGCTGCACCAAGCGCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| CDS CAA 72 bp | GCGCTTGGTGCAGCACCCGGGGCCTGGCATTGCTGGTaGAGCTGGTACAGGATGCTATGGATAGAGGGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: ALGAAPGAWHCW*SWYRMLWIEGR Trigger: CCTACCCTCTATCCATAGCATCCTGTACCAGCTCAACCAGCAATGCCAGGCCCCGGGTGCTGCACCAAGCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| CDS CAA 72 bp | AGGCTGCTGCTCAGCACCGCTGTGTTACACACACTCTaGCTGGTCAGGCCCGAGAGTACGTCTCCAGGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: RLLLSTAVLHTL*LVRPESTSPGG Trigger: GCCTCCTGGAGACGTACTCTCGGGCCTGACCAGCAAGAGTGTGTGTAACACAGCGGTGCTGAGCAGCAGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
||
| CDS GCA 72 bp | GGCTCCTGGTGCCAGCTCTGTCACTACGGCAGCAGCTaGTGGATTGTAGCAGTCACTGGTAGGTGTCACCAG | + |
|
Preference number: 6 (lower is better) Translates to: GSWCQLCHYGSS*WIVAVTGRCHQ Trigger: CTGGTGACACCTACCAGTGACTGCTACAATCCAGCAGCTGCTGCCGTAGTGACAGAGCTGGCACCAGGAGCC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| CDS CCA 72 bp | GGTGCAGCACCCGGGGCCTGGCATTGCTGGTTGAGCTaGTACAGGATGCTATGGATAGAGGGTAGGTTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: GAAPGAWHCWLS*YRMLWIEGRLE Trigger: CTCCAACCTACCCTCTATCCATAGCATCCTGTACCAGCTCAACCAGCAATGCCAGGCCCCGGGTGCTGCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| CDS CAA 72 bp | CGCGAGGAATGCATAGAGCTGGCCACTGACTCACACTaGCGCAGATCCAGGCTCTTGCTTGGACAGGCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: REECIELATDSH*RRSRLLLGQAR Trigger: CCTGGCCTGTCCAAGCAAGAGCCTGGATCTGCGCAAGTGTGAGTCAGTGGCCAGCTCTATGCATTCCTCGCG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| CDS CAA 72 bp | GTGCGGCTCAGGTGCTTGTGCTGCGGCACTCGGATGTaGGTGGGGAAGATCTTGATGGACAGGGGACTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: VRLRCLCCGTRM*VGKILMDRGLL Trigger: CAACAGTCCCCTGTCCATCAAGATCTTCCCCACCAACATCCGAGTGCCGCAGCACAAGCACCTGAGCCGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| CDS CAA 90 bp | CCATTGACCGTGCGGCTCAGGTGCTTGTGCTGCGGCACTCGGATGTaGGTGGGGAAGATCTTGATGGACAGGGGACTGTTGGCTACCTTC | + |
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Preference number: 6 (lower is better) Translates to: PLTVRLRCLCCGTRM*VGKILMDRGLLATF Trigger: GAAGGTAGCCAACAGTCCCCTGTCCATCAAGATCTTCCCCACCAACATCCGAGTGCCGCAGCACAAGCACCTGAGCCGCACGGTCAATGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| CDS CCA 72 bp | GGTGGCCGGATGTCGTTGATGAGATACTCCAGCGACTaGAGGCTGCTGCTCAGCACCGCTGTGTTACACACA | + |
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Preference number: 6 (lower is better) Translates to: GGRMSLMRYSSD*RLLLSTAVLHT Trigger: TGTGTGTAACACAGCGGTGCTGAGCAGCAGCCTCCAGTCGCTGGAGTATCTCATCAACGACATCCGGCCACC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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| CDS CCA 72 bp | GTAACCCTTACCCAGCATCTGTTCTTTGATGCAGGGTaGCCGGATGTCGTTGATGAGATACTCCAGCGACTG | + |
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Preference number: 6 (lower is better) Translates to: VTLTQHLFFDAG*PDVVDEILQRL Trigger: CAGTCGCTGGAGTATCTCATCAACGACATCCGGCCACCCTGCATCAAAGAACAGATGCTGGGTAAGGGTTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043650.8 |
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