Pregenerated sensors for FAM221B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043633Ensembl transcript IDs: ENSMUST00000056474.7
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GGCTGCAGGGATCTTACTAGTACCCACTGCCAGCTCATCTTCCCCTaGTTCCCCCTCCTTTGTAGATTCGTCCTCCTTGGCCTGGGTTGG | + |
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Preference number: 5 (lower is better) Translates to: GCRDLTSTHCQLIFP*FPLLCRFVLLGLGW Trigger: CCAACCCAGGCCAAGGAGGACGAATCTACAAAGGAGGGGGAAGCAGGGGAAGATGAGCTGGCAGTGGGTACTAGTAAGATCCCTGCAGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056474.7 |
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| CDS TCA 90 bp | GGTGGCCCGTTTCTTGAGCCAGAACTCACCCACCTCCTCTGGGCGTaGCGGGATAAAACAAAACATGAGGCACCTGCACTGGCTCACACT | + |
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Preference number: 5 (lower is better) Translates to: GGPFLEPELTHLLWA*RDKTKHEAPALAHT Trigger: AGTGTGAGCCAGTGCAGGTGCCTCATGTTTTGTTTTATCCCGTCACGCCCAGAGGAGGTGGGTGAGTTCTGGCTCAAGAAACGGGCCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056474.7 |
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| CDS GCA 90 bp | ATCAAATTGCTCTCTGTGCACTGCCTTAGCCATTTCCACCAGTTCTaGCCGCTTAGCAGGGACCACTGGGCGGCTTGTAACACCACCAGC | + |
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Preference number: 5 (lower is better) Translates to: IKLLSVHCLSHFHQF*PLSRDHWAACNTTS Trigger: GCTGGTGGTGTTACAAGCCGCCCAGTGGTCCCTGCTAAGCGGGCAGAACTGGTGGAAATGGCTAAGGCAGTGCACAGAGAGCAATTTGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056474.7 |
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| CDS CCA 90 bp | GAGGAGTTCCAGAGACAGAAGAATCCTGGAGGCCCTCAGCGCCCTTaGTGTCGGGATTCAGGGAGGCAGGTGTTTCAAGATGGATTTCTG | + |
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Preference number: 5 (lower is better) Translates to: EEFQRQKNPGGPQRP*CRDSGRQVFQDGFL Trigger: CAGAAATCCATCTTGAAACACCTGCCTCCCTGAATCCCGACACCAAGGGCGCTGAGGGCCTCCAGGATTCTTCTGTCTCTGGAACTCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056474.7 |
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| CDS CCA 90 bp | TCAGCGCCCTTGGTGTCGGGATTCAGGGAGGCAGGTGTTTCAAGATaGATTTCTGGAGGCTGGAAATGTTTCTGTGAGCTGGAGGGCTGT | + |
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Preference number: 5 (lower is better) Translates to: SAPLVSGFREAGVSR*ISGGWKCFCELEGC Trigger: ACAGCCCTCCAGCTCACAGAAACATTTCCAGCCTCCAGAAATCCATCTTGAAACACCTGCCTCCCTGAATCCCGACACCAAGGGCGCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056474.7 |
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| CDS GCA 90 bp | AGCTCTTTTCTCCTTCTTCTTCTTTGCACGAAGCCCAGGCTTGGCTaGAGGGATCTTACTAGTACCCACTGCCAGCTCATCTTCCCCTGC | + |
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Preference number: 5 (lower is better) Translates to: SSFLLLLLCTKPRLG*RDLTSTHCQLIFPC Trigger: GCAGGGGAAGATGAGCTGGCAGTGGGTACTAGTAAGATCCCTGCAGCCAAGCCTGGGCTTCGTGCAAAGAAGAAGAAGGAGAAAAGAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056474.7 |
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| CDS GCA 90 bp | TGGGCGGCTTGTAACACCACCAGCTCTTTTCTCCTTCTTCTTCTTTaGACGAAGCCCAGGCTTGGCTGCAGGGATCTTACTAGTACCCAC | + |
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Preference number: 5 (lower is better) Translates to: WAACNTTSSFLLLLL*TKPRLGCRDLTSTH Trigger: GTGGGTACTAGTAAGATCCCTGCAGCCAAGCCTGGGCTTCGTGCAAAGAAGAAGAAGGAGAAAAGAGCTGGTGGTGTTACAAGCCGCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056474.7 |
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| CDS CCA 90 bp | GATTCAGGGACCTGGGTCTGTGGGACTTTATCAGAGGTAAGCTCATaGGACGACTCAGGGATACTGGCTGTTGGTGAGACCTCAAGAGGT | + |
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Preference number: 5 (lower is better) Translates to: DSGTWVCGTLSEVSS*DDSGILAVGETSRG Trigger: ACCTCTTGAGGTCTCACCAACAGCCAGTATCCCTGAGTCGTCCCATGAGCTTACCTCTGATAAAGTCCCACAGACCCAGGTCCCTGAATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056474.7 |
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| CDS CCA 90 bp | TGCCTTAGCCATTTCCACCAGTTCTGCCCGCTTAGCAGGGACCACTaGGCGGCTTGTAACACCACCAGCTCTTTTCTCCTTCTTCTTCTT | + |
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Preference number: 5 (lower is better) Translates to: CLSHFHQFCPLSRDH*AACNTTSSFLLLLL Trigger: AAGAAGAAGAAGGAGAAAAGAGCTGGTGGTGTTACAAGCCGCCCAGTGGTCCCTGCTAAGCGGGCAGAACTGGTGGAAATGGCTAAGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056474.7 |
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| CDS CCA 90 bp | GGCTGGAAATGTTTCTGTGAGCTGGAGGGCTGTAAGGGAGTTTCATaGGTAGTGGCCTCGTACAAGTCTTCAGCGTTGGTGTCCTCTAAA | + |
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Preference number: 5 (lower is better) Translates to: GWKCFCELEGCKGVS*VVASYKSSALVSSK Trigger: TTTAGAGGACACCAACGCTGAAGACTTGTACGAGGCCACTACCCATGAAACTCCCTTACAGCCCTCCAGCTCACAGAAACATTTCCAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056474.7 |
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| CDS CCA 90 bp | TCGGGATTCAGGGAGGCAGGTGTTTCAAGATGGATTTCTGGAGGCTaGAAATGTTTCTGTGAGCTGGAGGGCTGTAAGGGAGTTTCATGG | + |
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Preference number: 5 (lower is better) Translates to: SGFREAGVSRWISGG*KCFCELEGCKGVSW Trigger: CCATGAAACTCCCTTACAGCCCTCCAGCTCACAGAAACATTTCCAGCCTCCAGAAATCCATCTTGAAACACCTGCCTCCCTGAATCCCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056474.7 |
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| CDS CCA 90 bp | ATTGAGGAGACAGTTGGGGTGGTAGGGAAAGAAGCCCAGAAGAACTaGACTTTACAGGAGGAGTTCCAGAGACAGAAGAATCCTGGAGGC | + |
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Preference number: 5 (lower is better) Translates to: IEETVGVVGKEAQKN*TLQEEFQRQKNPGG Trigger: GCCTCCAGGATTCTTCTGTCTCTGGAACTCCTCCTGTAAAGTCCAGTTCTTCTGGGCTTCTTTCCCTACCACCCCAACTGTCTCCTCAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056474.7 |
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| CDS GCA 90 bp | TCCTTGGCCTGGGTTGGTGATTCTGAAAAGGAGTGCTTTGGAAAGTaGTCAGATTCAGGGACCTGGGTCTGTGGGACTTTATCAGAGGTA | + |
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Preference number: 5 (lower is better) Translates to: SLAWVGDSEKECFGK*SDSGTWVCGTLSEV Trigger: TACCTCTGATAAAGTCCCACAGACCCAGGTCCCTGAATCTGAGCACTTTCCAAAGCACTCCTTTTCAGAATCACCAACCCAGGCCAAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056474.7 |
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| CDS GCA 90 bp | CTGGAAAAGATTGTTCACCTGATCATCAAATTGCTCTCTGTGCACTaGCTTAGCCATTTCCACCAGTTCTGCCCGCTTAGCAGGGACCAC | + |
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Preference number: 5 (lower is better) Translates to: LEKIVHLIIKLLSVH*LSHFHQFCPLSRDH Trigger: GTGGTCCCTGCTAAGCGGGCAGAACTGGTGGAAATGGCTAAGGCAGTGCACAGAGAGCAATTTGATGATCAGGTGAACAATCTTTTCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056474.7 |
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| CDS CCA 90 bp | AAAGGAGTGCTTTGGAAAGTGCTCAGATTCAGGGACCTGGGTCTGTaGGACTTTATCAGAGGTAAGCTCATGGGACGACTCAGGGATACT | + |
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Preference number: 5 (lower is better) Translates to: KGVLWKVLRFRDLGL*DFIRGKLMGRLRDT Trigger: AGTATCCCTGAGTCGTCCCATGAGCTTACCTCTGATAAAGTCCCACAGACCCAGGTCCCTGAATCTGAGCACTTTCCAAAGCACTCCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056474.7 |
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| CDS TCA 90 bp | TCCAAAGGAATCTCAGCGATGGCTTTTTCTAGAGAGGTCACAGATTaGGGAGACAGTTGGGGTGGTAGGGAAAGAAGCCCAGAAGAACTG | + |
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Preference number: 5 (lower is better) Translates to: SKGISAMAFSREVTD*GDSWGGRERSPEEL Trigger: CAGTTCTTCTGGGCTTCTTTCCCTACCACCCCAACTGTCTCCTCAATCTGTGACCTCTCTAGAAAAAGCCATCGCTGAGATTCCTTTGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056474.7 |
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| CDS CCA 90 bp | CTGCACTGGCTCACACTGCAGGGCACTGACAGATCTGAGATGATCTaGTGTTCTCTCAACAAATGTCCACAAAAGCACTTGGACTCATCT | + |
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Preference number: 5 (lower is better) Translates to: LHWLTLQGTDRSEMI*CSLNKCPQKHLDSS Trigger: AGATGAGTCCAAGTGCTTTTGTGGACATTTGTTGAGAGAACACCAGATCATCTCAGATCTGTCAGTGCCCTGCAGTGTGAGCCAGTGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056474.7 |
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| CDS CCA 90 bp | CCTCAAGAGGTTCTTTTTGGACTTCGGAGACGGGACTCTCATACTTaGGGATATTGGCTGTTGACGAGACCTCAAGAGGTTCTTTTTGGA | + |
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Preference number: 5 (lower is better) Translates to: PQEVLFGLRRRDSHT*GYWLLTRPQEVLFG Trigger: TCCAAAAAGAACCTCTTGAGGTCTCGTCAACAGCCAATATCCCCAAGTATGAGAGTCCCGTCTCCGAAGTCCAAAAAGAACCTCTTGAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000056474.7 |
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| CDS CCA 90 bp | TACTCTGGGATATTGGCTGTTGGTGAGACCTCAAGAGATTCCTTTTaGACTTCAGAGATGGGACTCCCATACTCTGGGATATTGGCTGTT | + |
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Preference number: 5 (lower is better) Translates to: YSGILAVGETSRDSF*TSEMGLPYSGILAV Trigger: AACAGCCAATATCCCAGAGTATGGGAGTCCCATCTCTGAAGTCCAAAAGGAATCTCTTGAGGTCTCACCAACAGCCAATATCCCAGAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056474.7 |
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| CDS CCA 90 bp | TACTTGGGGATATTGGCTGTTGACGAGACCTCAAGAGGTTCTTTTTaGACTTCAGAGATGGGACTCCCATACTCTGGGATATTGGCTGTT | + |
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Preference number: 5 (lower is better) Translates to: YLGILAVDETSRGSF*TSEMGLPYSGILAV Trigger: AACAGCCAATATCCCAGAGTATGGGAGTCCCATCTCTGAAGTCCAAAAAGAACCTCTTGAGGTCTCGTCAACAGCCAATATCCCCAAGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056474.7 |
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| CDS CAA 90 bp | CGACATTGGGCCCTCCAGGCCTTGGGGTCAAAGGTGGCCCGTTTCTaGAGCCAGAACTCACCCACCTCCTCTGGGCGTGACGGGATAAAA | + |
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Preference number: 6 (lower is better) Translates to: RHWALQALGSKVARF*SQNSPTSSGRDGIK Trigger: TTTTATCCCGTCACGCCCAGAGGAGGTGGGTGAGTTCTGGCTCAAGAAACGGGCCACCTTTGACCCCAAGGCCTGGAGGGCCCAATGTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056474.7 |
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| CDS CAA 90 bp | AGCGCCGGTGGCTGCATGTTCTTCGTGAGTGTGTTTACAGCGACATaGGGCCCTCCAGGCCTTGGGGTCAAAGGTGGCCCGTTTCTTGAG | + |
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Preference number: 6 (lower is better) Translates to: SAGGCMFFVSVFTAT*GPPGLGVKGGPFLE Trigger: CTCAAGAAACGGGCCACCTTTGACCCCAAGGCCTGGAGGGCCCAATGTCGCTGTAAACACACTCACGAAGAACATGCAGCCACCGGCGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056474.7 |
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| CDS GCA 72 bp | CTCTCTGTGCACTGCCTTAGCCATTTCCACCAGTTCTaGCCGCTTAGCAGGGACCACTGGGCGGCTTGTAAC | + |
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Preference number: 6 (lower is better) Translates to: LSVHCLSHFHQF*PLSRDHWAACN Trigger: GTTACAAGCCGCCCAGTGGTCCCTGCTAAGCGGGCAGAACTGGTGGAAATGGCTAAGGCAGTGCACAGAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056474.7 |
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| CDS GCA 72 bp | ACAGCCACGGTGCCTGCAGGGATGAGCGCCGGTGGCTaGATGTTCTTCGTGAGTGTGTTTACAGCGACATTG | + |
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Preference number: 6 (lower is better) Translates to: TATVPAGMSAGG*MFFVSVFTATL Trigger: CAATGTCGCTGTAAACACACTCACGAAGAACATGCAGCCACCGGCGCTCATCCCTGCAGGCACCGTGGCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056474.7 |
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| CDS CCA 72 bp | AGAAACAGCCACGGTGCCTGCAGGGATGAGCGCCGGTaGCTGCATGTTCTTCGTGAGTGTGTTTACAGCGAC | + |
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Preference number: 6 (lower is better) Translates to: RNSHGACRDERR*LHVLRECVYSD Trigger: GTCGCTGTAAACACACTCACGAAGAACATGCAGCCACCGGCGCTCATCCCTGCAGGCACCGTGGCTGTTTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056474.7 |
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| CDS CCA 72 bp | CAGAGACAGAAGAATCCTGGAGGCCCTCAGCGCCCTTaGTGTCGGGATTCAGGGAGGCAGGTGTTTCAAGAT | + |
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Preference number: 6 (lower is better) Translates to: QRQKNPGGPQRP*CRDSGRQVFQD Trigger: ATCTTGAAACACCTGCCTCCCTGAATCCCGACACCAAGGGCGCTGAGGGCCTCCAGGATTCTTCTGTCTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056474.7 |
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| CDS CCA 72 bp | GACTTTACAGGAGGAGTTCCAGAGACAGAAGAATCCTaGAGGCCCTCAGCGCCCTTGGTGTCGGGATTCAGG | + |
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Preference number: 6 (lower is better) Translates to: DFTGGVPETEES*RPSAPLVSGFR Trigger: CCTGAATCCCGACACCAAGGGCGCTGAGGGCCTCCAGGATTCTTCTGTCTCTGGAACTCCTCCTGTAAAGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056474.7 |
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| CDS CAA 90 bp | GGAGGAGTTCCAGAGACAGAAGAATCCTGGAGGCCCTCAGCGCCCTaGGTGTCGGGATTCAGGGAGGCAGGTGTTTCAAGATGGATTTCT | + |
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Preference number: 6 (lower is better) Translates to: GGVPETEESWRPSAP*VSGFREAGVSRWIS Trigger: AGAAATCCATCTTGAAACACCTGCCTCCCTGAATCCCGACACCAAGGGCGCTGAGGGCCTCCAGGATTCTTCTGTCTCTGGAACTCCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056474.7 |
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| CDS GCA 72 bp | GATCTTACTAGTACCCACTGCCAGCTCATCTTCCCCTaGTTCCCCCTCCTTTGTAGATTCGTCCTCCTTGGC | + |
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Preference number: 6 (lower is better) Translates to: DLTSTHCQLIFP*FPLLCRFVLLG Trigger: GCCAAGGAGGACGAATCTACAAAGGAGGGGGAAGCAGGGGAAGATGAGCTGGCAGTGGGTACTAGTAAGATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056474.7 |
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| CDS GCA 72 bp | CTCCTTCTTCTTCTTTGCACGAAGCCCAGGCTTGGCTaGAGGGATCTTACTAGTACCCACTGCCAGCTCATC | + |
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Preference number: 6 (lower is better) Translates to: LLLLLCTKPRLG*RDLTSTHCQLI Trigger: GATGAGCTGGCAGTGGGTACTAGTAAGATCCCTGCAGCCAAGCCTGGGCTTCGTGCAAAGAAGAAGAAGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056474.7 |
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| CDS CCA 72 bp | ACCTGGGTCTGTGGGACTTTATCAGAGGTAAGCTCATaGGACGACTCAGGGATACTGGCTGTTGGTGAGACC | + |
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Preference number: 6 (lower is better) Translates to: TWVCGTLSEVSS*DDSGILAVGET Trigger: GGTCTCACCAACAGCCAGTATCCCTGAGTCGTCCCATGAGCTTACCTCTGATAAAGTCCCACAGACCCAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056474.7 |
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| CDS TCA 72 bp | TTTCTTGAGCCAGAACTCACCCACCTCCTCTGGGCGTaGCGGGATAAAACAAAACATGAGGCACCTGCACTG | + |
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Preference number: 6 (lower is better) Translates to: FLEPELTHLLWA*RDKTKHEAPAL Trigger: CAGTGCAGGTGCCTCATGTTTTGTTTTATCCCGTCACGCCCAGAGGAGGTGGGTGAGTTCTGGCTCAAGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056474.7 |
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| CDS GCA 72 bp | TCCTCCTTGGCCTGGGTTGGTGATTCTGAAAAGGAGTaGTTTGGAAAGTGCTCAGATTCAGGGACCTGGGTC | + |
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Preference number: 6 (lower is better) Translates to: SSLAWVGDSEKE*FGKCSDSGTWV Trigger: GACCCAGGTCCCTGAATCTGAGCACTTTCCAAAGCACTCCTTTTCAGAATCACCAACCCAGGCCAAGGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056474.7 |
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| CDS CCA 72 bp | AGGGAGGCAGGTGTTTCAAGATGGATTTCTGGAGGCTaGAAATGTTTCTGTGAGCTGGAGGGCTGTAAGGGA | + |
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Preference number: 6 (lower is better) Translates to: REAGVSRWISGG*KCFCELEGCKG Trigger: TCCCTTACAGCCCTCCAGCTCACAGAAACATTTCCAGCCTCCAGAAATCCATCTTGAAACACCTGCCTCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056474.7 |
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| CDS CCA 72 bp | CTTTGGAAAGTGCTCAGATTCAGGGACCTGGGTCTGTaGGACTTTATCAGAGGTAAGCTCATGGGACGACTC | + |
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Preference number: 6 (lower is better) Translates to: LWKVLRFRDLGL*DFIRGKLMGRL Trigger: GAGTCGTCCCATGAGCTTACCTCTGATAAAGTCCCACAGACCCAGGTCCCTGAATCTGAGCACTTTCCAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056474.7 |
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| CDS CCA 72 bp | GCTTCCCCCTCCTTTGTAGATTCGTCCTCCTTGGCCTaGGTTGGTGATTCTGAAAAGGAGTGCTTTGGAAAG | + |
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Preference number: 6 (lower is better) Translates to: ASPSFVDSSSLA*VGDSEKECFGK Trigger: CTTTCCAAAGCACTCCTTTTCAGAATCACCAACCCAGGCCAAGGAGGACGAATCTACAAAGGAGGGGGAAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056474.7 |
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| CDS CAA 90 bp | ATTCGTCCTCCTTGGCCTGGGTTGGTGATTCTGAAAAGGAGTGCTTaGGAAAGTGCTCAGATTCAGGGACCTGGGTCTGTGGGACTTTAT | + |
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Preference number: 6 (lower is better) Translates to: IRPPWPGLVILKRSA*ESAQIQGPGSVGLY Trigger: ATAAAGTCCCACAGACCCAGGTCCCTGAATCTGAGCACTTTCCAAAGCACTCCTTTTCAGAATCACCAACCCAGGCCAAGGAGGACGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056474.7 |
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| CDS GCA 72 bp | TGTAACACCACCAGCTCTTTTCTCCTTCTTCTTCTTTaGACGAAGCCCAGGCTTGGCTGCAGGGATCTTACT | + |
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Preference number: 6 (lower is better) Translates to: CNTTSSFLLLLL*TKPRLGCRDLT Trigger: AGTAAGATCCCTGCAGCCAAGCCTGGGCTTCGTGCAAAGAAGAAGAAGGAGAAAAGAGCTGGTGGTGTTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056474.7 |
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| CDS CCA 72 bp | TTGGTGTCGGGATTCAGGGAGGCAGGTGTTTCAAGATaGATTTCTGGAGGCTGGAAATGTTTCTGTGAGCTG | + |
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Preference number: 6 (lower is better) Translates to: LVSGFREAGVSR*ISGGWKCFCEL Trigger: CAGCTCACAGAAACATTTCCAGCCTCCAGAAATCCATCTTGAAACACCTGCCTCCCTGAATCCCGACACCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056474.7 |
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| CDS CCA 72 bp | GGACTTCGGAGACGGGACTCTCATACTTGGGGATATTaGCTGTTGACGAGACCTCAAGAGGTTCTTTTTGGA | + |
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Preference number: 6 (lower is better) Translates to: GLRRRDSHTWGY*LLTRPQEVLFG Trigger: TCCAAAAAGAACCTCTTGAGGTCTCGTCAACAGCCAATATCCCCAAGTATGAGAGTCCCGTCTCCGAAGTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056474.7 |
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| CDS CCA 72 bp | AAGGAGTGCTTTGGAAAGTGCTCAGATTCAGGGACCTaGGTCTGTGGGACTTTATCAGAGGTAAGCTCATGG | + |
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Preference number: 6 (lower is better) Translates to: KECFGKCSDSGT*VCGTLSEVSSW Trigger: CCATGAGCTTACCTCTGATAAAGTCCCACAGACCCAGGTCCCTGAATCTGAGCACTTTCCAAAGCACTCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056474.7 |
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| CDS CAA 72 bp | CGGAGACGGGACTCTCATACTTGGGGATATTGGCTGTaGACGAGACCTCAAGAGGTTCTTTTTGGACTTCAG | + |
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Preference number: 6 (lower is better) Translates to: RRRDSHTWGYWL*TRPQEVLFGLQ Trigger: CTGAAGTCCAAAAAGAACCTCTTGAGGTCTCGTCAACAGCCAATATCCCCAAGTATGAGAGTCCCGTCTCCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056474.7 |
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| CDS CAA 72 bp | TGGACTTCGGAGACGGGACTCTCATACTTGGGGATATaGGCTGTTGACGAGACCTCAAGAGGTTCTTTTTGG | + |
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Preference number: 6 (lower is better) Translates to: WTSETGLSYLGI*AVDETSRGSFW Trigger: CCAAAAAGAACCTCTTGAGGTCTCGTCAACAGCCAATATCCCCAAGTATGAGAGTCCCGTCTCCGAAGTCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056474.7 |
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| CDS TCA 72 bp | GGAGACGGGACTCTCATACTTGGGGATATTGGCTGTTaGCGAGACCTCAAGAGGTTCTTTTTGGACTTCAGA | + |
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Preference number: 6 (lower is better) Translates to: GDGTLILGDIGC*RDLKRFFLDFR Trigger: TCTGAAGTCCAAAAAGAACCTCTTGAGGTCTCGTCAACAGCCAATATCCCCAAGTATGAGAGTCCCGTCTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056474.7 |
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| CDS TCA 72 bp | ACTGGCTCACACTGCAGGGCACTGACAGATCTGAGATaGTCTGGTGTTCTCTCAACAAATGTCCACAAAAGC | + |
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Preference number: 6 (lower is better) Translates to: TGSHCRALTDLR*SGVLSTNVHKS Trigger: GCTTTTGTGGACATTTGTTGAGAGAACACCAGATCATCTCAGATCTGTCAGTGCCCTGCAGTGTGAGCCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056474.7 |
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| CDS GCA 72 bp | TGGGTTGGTGATTCTGAAAAGGAGTGCTTTGGAAAGTaGTCAGATTCAGGGACCTGGGTCTGTGGGACTTTA | + |
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Preference number: 6 (lower is better) Translates to: WVGDSEKECFGK*SDSGTWVCGTL Trigger: TAAAGTCCCACAGACCCAGGTCCCTGAATCTGAGCACTTTCCAAAGCACTCCTTTTCAGAATCACCAACCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056474.7 |
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| CDS GCA 72 bp | ATTGTTCACCTGATCATCAAATTGCTCTCTGTGCACTaGCTTAGCCATTTCCACCAGTTCTGCCCGCTTAGC | + |
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Preference number: 6 (lower is better) Translates to: IVHLIIKLLSVH*LSHFHQFCPLS Trigger: GCTAAGCGGGCAGAACTGGTGGAAATGGCTAAGGCAGTGCACAGAGAGCAATTTGATGATCAGGTGAACAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056474.7 |
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| CDS CCA 72 bp | GTTCTTTTTGGACTTCGGAGACGGGACTCTCATACTTaGGGATATTGGCTGTTGACGAGACCTCAAGAGGTT | + |
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Preference number: 6 (lower is better) Translates to: VLFGLRRRDSHT*GYWLLTRPQEV Trigger: AACCTCTTGAGGTCTCGTCAACAGCCAATATCCCCAAGTATGAGAGTCCCGTCTCCGAAGTCCAAAAAGAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056474.7 |
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| CDS CCA 72 bp | ATACTGGCTGTTGGTGAGACCTCAAGAGGTTCTTTTTaGACTTCGGAGACGGGACTCTCATACTTGGGGATA | + |
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Preference number: 6 (lower is better) Translates to: ILAVGETSRGSF*TSETGLSYLGI Trigger: TATCCCCAAGTATGAGAGTCCCGTCTCCGAAGTCCAAAAAGAACCTCTTGAGGTCTCACCAACAGCCAGTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056474.7 |
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| CDS CAA 72 bp | CAGAGATGGGACTCCCATACTCTGGGATATTGGCTGTaGGTGAGACCTCAAGAGATTCCTTTTGGACTTCAG | + |
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Preference number: 6 (lower is better) Translates to: QRWDSHTLGYWL*VRPQEIPFGLQ Trigger: CTGAAGTCCAAAAGGAATCTCTTGAGGTCTCACCAACAGCCAATATCCCAGAGTATGGGAGTCCCATCTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056474.7 |
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| CDS TCA 72 bp | CTCCCATACTCTGGGATATTGGCTGTTGGTGAGAGCTaGAGAGGTTCTTCTTTGACTTTAGAGATAGGACTG | + |
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Preference number: 6 (lower is better) Translates to: LPYSGILAVGES*RGSSLTLEIGL Trigger: CAGTCCTATCTCTAAAGTCAAAGAAGAACCTCTTCAGCTCTCACCAACAGCCAATATCCCAGAGTATGGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056474.7 |
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| CDS CCA 72 bp | TGTCATAGCCAAACTCCTCCAAAGGAATCTCAGCGATaGCTTTTTCTAGAGAGGTCACAGATTGAGGAGACA | + |
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Preference number: 6 (lower is better) Translates to: CHSQTPPKESQR*LFLERSQIEET Trigger: TGTCTCCTCAATCTGTGACCTCTCTAGAAAAAGCCATCGCTGAGATTCCTTTGGAGGAGTTTGGCTATGACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056474.7 |
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| CDS CCA 72 bp | ATATTGGCTGTTGGTGAGACCTCAAGAGATTCCTTTTaGACTTCAGAGATGGGACTCCCATACTCTGGGATA | + |
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Preference number: 6 (lower is better) Translates to: ILAVGETSRDSF*TSEMGLPYSGI Trigger: TATCCCAGAGTATGGGAGTCCCATCTCTGAAGTCCAAAAGGAATCTCTTGAGGTCTCACCAACAGCCAATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056474.7 |
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| CDS CCA 72 bp | ATATTGGCTGTTGACGAGACCTCAAGAGGTTCTTTTTaGACTTCAGAGATGGGACTCCCATACTCTGGGATA | + |
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Preference number: 6 (lower is better) Translates to: ILAVDETSRGSF*TSEMGLPYSGI Trigger: TATCCCAGAGTATGGGAGTCCCATCTCTGAAGTCCAAAAAGAACCTCTTGAGGTCTCGTCAACAGCCAATAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056474.7 |
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| CDS CCA 72 bp | TGTTGTTTGCTCCATAAGGTCTCTTTCCTTTTCGCCTaGTATCCCCAGTCTCAAAGAACGTCTCATGTTCTT | + |
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Preference number: 6 (lower is better) Translates to: CCLLHKVSFLFA*YPQSQRTSHVL Trigger: AAGAACATGAGACGTTCTTTGAGACTGGGGATACCAGGCGAAAAGGAAAGAGACCTTATGGAGCAAACAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056474.7 |
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| CDS CAA 72 bp | ATCTGGTGTTCTCTCAACAAATGTCCACAAAAGCACTaGGACTCATCTCCTATCCGGAAACAGTCCCATAAA | + |
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Preference number: 6 (lower is better) Translates to: IWCSLNKCPQKH*DSSPIRKQSHK Trigger: TTTATGGGACTGTTTCCGGATAGGAGATGAGTCCAAGTGCTTTTGTGGACATTTGTTGAGAGAACACCAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056474.7 |
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