Pregenerated sensors for FAM221A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047115Ensembl transcript IDs: ENSMUST00000060561.15, ENSMUST00000121903.2, ENSMUST00000134786.2
Found 76 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGCCGGGACGATCTGTGGCTAGACATCACATTCAGAAGCCGAGCCTaGCTGAGCTCCAGGCAGCTGCACACCACCCTGTTGACAGTACTA | + |
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Preference number: 1 (lower is better) Translates to: SRDDLWLDITFRSRA*LSSRQLHTTLLTVL Trigger: TAGTACTGTCAACAGGGTGGTGTGCAGCTGCCTGGAGCTCAGGCAGGCTCGGCTTCTGAATGTGATGTCTAGCCACAGATCGTCCCGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060561.15 |
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| 3UTR TCA 90 bp | CAACATGGACCATGGAGGTCTTTCAAGAAGGTCCAATCCACAAAATaGGCCTTTCTTCCTCTTGGCCATCCTCCACTGCCTAGAGCCGGG | + |
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Preference number: 1 (lower is better) Translates to: QHGPWRSFKKVQSTK*AFLPLGHPPLPRAG Trigger: CCCGGCTCTAGGCAGTGGAGGATGGCCAAGAGGAAGAAAGGCTCATTTTGTGGATTGGACCTTCTTGAAAGACCTCCATGGTCCATGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060561.15 |
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| 3UTR CCA 90 bp | ACATCCACAGGCCACACAACGCCAACACGGCTTCTGGCAGCAACATaGACCATGGAGGTCTTTCAAGAAGGTCCAATCCACAAAATGAGC | + |
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Preference number: 1 (lower is better) Translates to: TSTGHTTPTRLLAAT*TMEVFQEGPIHKMS Trigger: GCTCATTTTGTGGATTGGACCTTCTTGAAAGACCTCCATGGTCCATGTTGCTGCCAGAAGCCGTGTTGGCGTTGTGTGGCCTGTGGATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060561.15 |
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| 3UTR GCA 90 bp | TCCAATCCACAAAATGAGCCTTTCTTCCTCTTGGCCATCCTCCACTaGCTAGAGCCGGGACGATCTGTGGCTAGACATCACATTCAGAAG | + |
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Preference number: 1 (lower is better) Translates to: SNPQNEPFFLLAILH*LEPGRSVARHHIQK Trigger: CTTCTGAATGTGATGTCTAGCCACAGATCGTCCCGGCTCTAGGCAGTGGAGGATGGCCAAGAGGAAGAAAGGCTCATTTTGTGGATTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060561.15 |
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| 3UTR CCA 90 bp | TTTTTAAGTACTCTCTTAATGGCTTCCTGTCCAGACTGTTTAGTTTaGAGATGGAAGGAGGGTACCATAGAAGCCTTCAATGTCTCTCAT | + |
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Preference number: 1 (lower is better) Translates to: FLSTLLMASCPDCLV*RWKEGTIEAFNVSH Trigger: ATGAGAGACATTGAAGGCTTCTATGGTACCCTCCTTCCATCTCCAAACTAAACAGTCTGGACAGGAAGCCATTAAGAGAGTACTTAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060561.15 |
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| 3UTR-3UTR CCA 90 bp | AAGACTCCTACCCAAAGGCAGGGTGACTCTGTGGGTGGGTGGTATGGCTGGGGCCAGTCCTTAGCCAACTaGGAGGTGAGGCCCAGCAGT | + |
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Preference number: 2 (lower is better) Translates to: KTPTQRQGDSVGGWYGWGQSLAN*EVRPSS Trigger: ACTGCTGGGCCTCACCTCCCAGTTGGCTAAGGACTG...GCCCCAGCCATACCACCCACCCACAGAGTCACCCTGCCTTTGGGTAGGAGTCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060561.15 |
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| 3UTR CAA 90 bp | CAACTGGGAGGTGAGGCCCAGCAGTTCAGTAGAAGCATGGAGCCATaGCTAGAGCCCTCGCTGGTTGTCCTATTGAAGGGAGGAGGACCT | + |
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Preference number: 2 (lower is better) Translates to: QLGGEAQQFSRSMEP*LEPSLVVLLKGGGP Trigger: AGGTCCTCCTCCCTTCAATAGGACAACCAGCGAGGGCTCTAGCAATGGCTCCATGCTTCTACTGAACTGCTGGGCCTCACCTCCCAGTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060561.15 |
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| 3UTR-3UTR GCA 90 bp | CTACCCAAAGGCAGGGTGACTCTGTGGGTGGGTGGTATGGCTGGGGCCATAATAAAGGGCACAGAAGAGTaGAGCACTGCCCAGCCACAT | + |
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Preference number: 2 (lower is better) Translates to: LPKGRVTLWVGGMAGAIIKGTEE*STAQPH Trigger: ATGTGGCTGGGCAGTGCTGCACTCTTCTGTGCCCTT...TATTATGGCCCCAGCCATACCACCCACCCACAGAGTCACCCTGCCTTTGGGTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060561.15 |
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| 3UTR-3UTR GCA 90 bp | ACCCCACTCCCCTGTCAGAAGCCATCAACTGTGAAGAGCTACACTTCAGCATCCTTCAGAAGCCGAGCCTaGCTGAGCTCCAGGCAGCTG | + |
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Preference number: 2 (lower is better) Translates to: TPLPCQKPSTVKSYTSASFRSRA*LSSRQL Trigger: CAGCTGCCTGGAGCTCAGGCAGGCTCGGCTTCTGAA...GGATGCTGAAGTGTAGCTCTTCACAGTTGATGGCTTCTGACAGGGGAGTGGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060561.15 |
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| 3UTR-3UTR CCA 90 bp | AGACTCCTACCCAAAGGCAGGGTGACTCTGTGGGTGGGTGGTATGGCTGGGGCCGAGACTGTTAAAAACTaGAGAAGCAGCACTGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: RLLPKGRVTLWVGGMAGAETVKN*RSSTGQ Trigger: CTGCCCAGTGCTGCTTCTCCAGTTTTTAACAGTCTC...GGCCCCAGCCATACCACCCACCCACAGAGTCACCCTGCCTTTGGGTAGGAGTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060561.15 |
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| 3UTR CAA 90 bp | GGTCTTTCAAGAAGGTCCAATCCACAAAATGAGCCTTTCTTCCTCTaGGCCATCCTCCACTGCCTAGAGCCGGGACGATCTGTGGCTAGA | + |
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Preference number: 2 (lower is better) Translates to: GLSRRSNPQNEPFFL*AILHCLEPGRSVAR Trigger: TCTAGCCACAGATCGTCCCGGCTCTAGGCAGTGGAGGATGGCCAAGAGGAAGAAAGGCTCATTTTGTGGATTGGACCTTCTTGAAAGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060561.15 |
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| 3UTR-3UTR TCA 90 bp | GGAGGGTACCATAGAAGCCTTCAATGTCTCTCATTCTCAACTGTGAGTCTGAAGGCCACATGGTCACCCTaGCTCTGGGCAACAACAGGA | + |
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Preference number: 2 (lower is better) Translates to: GGYHRSLQCLSFSTVSLKATWSP*LWATTG Trigger: TCCTGTTGTTGCCCAGAGTCAGGGTGACCATGTGGC...CTTCAGACTCACAGTTGAGAATGAGAGACATTGAAGGCTTCTATGGTACCCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060561.15 |
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| 3UTR-3UTR TCA 90 bp | TTCTGGTTTCCGAAGCACCATAAATACTGGGTTACTGCTAAGACTCCTACCCAAGGCGCTGCCCAGGCCTaGAAGCACAATGGTCACATC | + |
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Preference number: 2 (lower is better) Translates to: FWFPKHHKYWVTAKTPTQGAAQA*KHNGHI Trigger: GATGTGACCATTGTGCTTTCAGGCCTGGGCAGCGCC...TTGGGTAGGAGTCTTAGCAGTAACCCAGTATTTATGGTGCTTCGGAAACCAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060561.15 |
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| 3UTR-3UTR TCA 90 bp | CAGAAGCCATCAACTGTGAAGAGCTACACTTCAGCATCCCTAGCACAGTTTTTAGGCAGCCTGGACCACTaGCATCCACAGGCCACACAA | + |
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Preference number: 2 (lower is better) Translates to: QKPSTVKSYTSASLAQFLGSLDH*HPQATQ Trigger: TTGTGTGGCCTGTGGATGTCAGTGGTCCAGGCTGCC...TAAAAACTGTGCTAGGGATGCTGAAGTGTAGCTCTTCACAGTTGATGGCTTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060561.15 |
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| 3UTR-3UTR TCA 90 bp | AGCAACATGGACCATGGAGGTCTTTCAAGAAGGTCCAATCCACAAAATGAGCCTCGCTGGTTGTCCTATTaGAGGGAGGAGGACCTGGAA | + |
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Preference number: 2 (lower is better) Translates to: SNMDHGGLSRRSNPQNEPRWLSY*REEDLE Trigger: TTCCAGGTCCTCCTCCCTTCAATAGGACAACCAGCG...AGGCTCATTTTGTGGATTGGACCTTCTTGAAAGACCTCCATGGTCCATGTTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060561.15 |
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| 3UTR-3UTR CCA 90 bp | TACCATAGAAGCCTTCAATGTCTCTCATTCTCAACTGTGAGTCTGAAGTCATTGGAAGGGAGGAGGACCTaGAACCTAGGCGCTGCCCAG | + |
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Preference number: 2 (lower is better) Translates to: YHRSLQCLSFSTVSLKSLEGRRT*NLGAAQ Trigger: CTGGGCAGCGCCTAGGTTCCAGGTCCTCCTCCCTTC...CAATGACTTCAGACTCACAGTTGAGAATGAGAGACATTGAAGGCTTCTATGGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060561.15 |
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| 3UTR CAA 90 bp | GTCGCCACCACAGCCCCTCAGTTCTGCCATCTTTCCCATCTCTCCTaGTATTTTTATTCATTGAGGTGGCACTGCAAACAACAATATGTC | + |
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Preference number: 2 (lower is better) Translates to: VATTAPQFCHLSHLS*YFYSLRWHCKQQYV Trigger: GACATATTGTTGTTTGCAGTGCCACCTCAATGAATAAAAATACAAGGAGAGATGGGAAAGATGGCAGAACTGAGGGGCTGTGGTGGCGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060561.15 |
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| 3UTR-3UTR CCA 90 bp | GTGAAGAGCTACACTTCAGCATCCCTAGCACAGTTTTTAAGTACTCTCTTAATGGGCCTGAAAGCACAATaGTCACATCGGGTGAGCCAG | + |
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Preference number: 2 (lower is better) Translates to: VKSYTSASLAQFLSTLLMGLKAQ*SHRVSQ Trigger: CTGGCTCACCCGATGTGACCATTGTGCTTTCAGGCC...CATTAAGAGAGTACTTAAAAACTGTGCTAGGGATGCTGAAGTGTAGCTCTTCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060561.15 |
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| 3UTR CAA 90 bp | AGAAGCCTTCAATGTCTCTCATTCTCAACTGTGAGTCTGAAGTCATaGAAAATACTGCAAAGAAGCTTCCTTGTCCGTAGCAGCCAGCCG | + |
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Preference number: 2 (lower is better) Translates to: RSLQCLSFSTVSLKS*KILQRSFLVRSSQP Trigger: CGGCTGGCTGCTACGGACAAGGAAGCTTCTTTGCAGTATTTTCAATGACTTCAGACTCACAGTTGAGAATGAGAGACATTGAAGGCTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060561.15 |
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| 3UTR-3UTR CCA 90 bp | GGAGGGTACCATAGAAGCCTTCAATGTCTCTCATTCTCAACTGTGAGTCTGAAGCTGATTCAATGTTTCTaGTTTCCGAAGCACCATAAA | + |
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Preference number: 2 (lower is better) Translates to: GGYHRSLQCLSFSTVSLKLIQCF*FPKHHK Trigger: TTTATGGTGCTTCGGAAACCAGAAACATTGAATCAG...CTTCAGACTCACAGTTGAGAATGAGAGACATTGAAGGCTTCTATGGTACCCTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060561.15 |
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| 3UTR-3UTR TCA 90 bp | TTAATGGCTTCCTGTCCAGACTGTTTAGTTTGGAGATGGAAGGAGGGTACCATACAAGTCTTGCTACATTaGATGAAAAATCTGACCCTA | + |
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Preference number: 2 (lower is better) Translates to: LMASCPDCLVWRWKEGTIQVLLH*MKNLTL Trigger: TAGGGTCAGATTTTTCATTCAATGTAGCAAGACTTG...TATGGTACCCTCCTTCCATCTCCAAACTAAACAGTCTGGACAGGAAGCCATTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060561.15 |
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| 3UTR TCA 72 bp | CAGACAGAGGATGTCCCCAGGGGCAGCCTGGACCACTaGCATCCACAGGCCACACAACGCCAACACGGCTTC | + |
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Preference number: 3 (lower is better) Translates to: QTEDVPRGSLDH*HPQATQRQHGF Trigger: GAAGCCGTGTTGGCGTTGTGTGGCCTGTGGATGTCAGTGGTCCAGGCTGCCCCTGGGGACATCCTCTGTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060561.15 |
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| 3UTR CCA 72 bp | CTGGAACCTAGGCGCTGCCCAGGCCTGAAAGCACAATaGTCACATCGGGTGAGCCAGCAGGACAACTGTCAC | + |
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Preference number: 3 (lower is better) Translates to: LEPRRCPGLKAQ*SHRVSQQDNCH Trigger: GTGACAGTTGTCCTGCTGGCTCACCCGATGTGACCATTGTGCTTTCAGGCCTGGGCAGCGCCTAGGTTCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060561.15 |
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| 3UTR GCA 72 bp | GCCAGCAGGACAACTGTCACTAAGGGCACAGAAGAGTaGAGCACTGCCCAGCCACATGGTCACCCTGACTCT | + |
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Preference number: 3 (lower is better) Translates to: ASRTTVTKGTEE*STAQPHGHPDS Trigger: AGAGTCAGGGTGACCATGTGGCTGGGCAGTGCTGCACTCTTCTGTGCCCTTAGTGACAGTTGTCCTGCTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060561.15 |
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| 3UTR CCA 72 bp | GGCCACACAACGCCAACACGGCTTCTGGCAGCAACATaGACCATGGAGGTCTTTCAAGAAGGTCCAATCCAC | + |
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Preference number: 3 (lower is better) Translates to: GHTTPTRLLAAT*TMEVFQEGPIH Trigger: GTGGATTGGACCTTCTTGAAAGACCTCCATGGTCCATGTTGCTGCCAGAAGCCGTGTTGGCGTTGTGTGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060561.15 |
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| 3UTR GCA 72 bp | CAAAATGAGCCTTTCTTCCTCTTGGCCATCCTCCACTaGCTAGAGCCGGGACGATCTGTGGCTAGACATCAC | + |
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Preference number: 3 (lower is better) Translates to: QNEPFFLLAILH*LEPGRSVARHH Trigger: GTGATGTCTAGCCACAGATCGTCCCGGCTCTAGGCAGTGGAGGATGGCCAAGAGGAAGAAAGGCTCATTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060561.15 |
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| 3UTR CCA 72 bp | TGGATGACGGCTCGATCTGTTCACCAGACTTCACGATaGCTTTGTGCTCGGCAGCGGTGGCACTTTTCCTTT | + |
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Preference number: 3 (lower is better) Translates to: WMTARSVHQTSR*LCARQRWHFSF Trigger: AAAGGAAAAGTGCCACCGCTGCCGAGCACAAAGCCATCGTGAAGTCTGGTGAACAGATCGAGCCGTCATCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121903.2 |
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| 3UTR TCA 72 bp | TCTGTGGGTGGGTGGTATGGCTGGGGCCATAATACTTaGTTAAGGGCTCAGAAACTCAGGGGTAGGAGACTG | + |
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Preference number: 3 (lower is better) Translates to: SVGGWYGWGHNT*LRAQKLRGRRL Trigger: CAGTCTCCTACCCCTGAGTTTCTGAGCCCTTAATCAAGTATTATGGCCCCAGCCATACCACCCACCCACAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060561.15 |
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| 3UTR-3UTR CAA 90 bp | AAGACTCCTACCCAAAGGCAGGGTGACTCTGTGGGTGGGTGGTATGGCTGGGGCCCAAGTCTTGCTACATaGAATGAAAAATCTGACCCT | + |
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Preference number: 3 (lower is better) Translates to: KTPTQRQGDSVGGWYGWGPSLAT*NEKSDP Trigger: AGGGTCAGATTTTTCATTCAATGTAGCAAGACTTGG...GCCCCAGCCATACCACCCACCCACAGAGTCACCCTGCCTTTGGGTAGGAGTCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060561.15 |
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| 3UTR-3UTR CAA 90 bp | TACCATAGAAGCCTTCAATGTCTCTCATTCTCAACTGTGAGTCTGAAGTCATTGTCGCTGGTTGTCCTATaGAAGGGAGGAGGACCTGGA | + |
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Preference number: 3 (lower is better) Translates to: YHRSLQCLSFSTVSLKSLSLVVL*KGGGPG Trigger: TCCAGGTCCTCCTCCCTTCAATAGGACAACCAGCGA...CAATGACTTCAGACTCACAGTTGAGAATGAGAGACATTGAAGGCTTCTATGGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060561.15 |
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| 3UTR-3UTR CAA 90 bp | ACAACGCCAACACGGCTTCTGGCAGCAACATGGACCATGGAGGTCTTTCAAGAAACATGCAAATCCATATaGCAACTAGTAATTGGTCTG | + |
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Preference number: 3 (lower is better) Translates to: TTPTRLLAATWTMEVFQETCKSI*QLVIGL Trigger: CAGACCAATTACTAGTTGCAATATGGATTTGCATGT...TTCTTGAAAGACCTCCATGGTCCATGTTGCTGCCAGAAGCCGTGTTGGCGTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060561.15 |
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| 3UTR CCA 72 bp | ATTCAATGTTTCTGGTTTCCGAAGCACCATAAATACTaGGTTACTGCTAAGACTCCTACCCAAAGGCAGGGT | + |
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Preference number: 3 (lower is better) Translates to: IQCFWFPKHHKY*VTAKTPTQRQG Trigger: ACCCTGCCTTTGGGTAGGAGTCTTAGCAGTAACCCAGTATTTATGGTGCTTCGGAAACCAGAAACATTGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060561.15 |
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| 3UTR CCA 72 bp | ACTCTCTTAATGGCTTCCTGTCCAGACTGTTTAGTTTaGAGATGGAAGGAGGGTACCATAGAAGCCTTCAAT | + |
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Preference number: 3 (lower is better) Translates to: TLLMASCPDCLV*RWKEGTIEAFN Trigger: ATTGAAGGCTTCTATGGTACCCTCCTTCCATCTCCAAACTAAACAGTCTGGACAGGAAGCCATTAAGAGAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060561.15 |
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| 3UTR CCA 72 bp | CAGCTTTACATGCAAATCCATATTGCAACTAGTAATTaGTCTGATTCAATGTTTCTGGTTTCCGAAGCACCA | + |
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Preference number: 3 (lower is better) Translates to: QLYMQIHIATSN*SDSMFLVSEAP Trigger: TGGTGCTTCGGAAACCAGAAACATTGAATCAGACCAATTACTAGTTGCAATATGGATTTGCATGTAAAGCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060561.15 |
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| 3UTR CCA 72 bp | ATATTGCAACTAGTAATTGGTCTGATTCAATGTTTCTaGTTTCCGAAGCACCATAAATACTGGGTTACTGCT | + |
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Preference number: 3 (lower is better) Translates to: ILQLVIGLIQCF*FPKHHKYWVTA Trigger: AGCAGTAACCCAGTATTTATGGTGCTTCGGAAACCAGAAACATTGAATCAGACCAATTACTAGTTGCAATAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060561.15 |
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| CDS-3UTR TCA 90 bp | AGACTCCTACCCAAAGGCAGGGTGACTCTGTGGGTGGGTGGTATGGCTGGGGCCAGAGCGGCACTGTGCTaGTCAGCAAAGTGCTTGCAC | + |
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Preference number: 4 (lower is better) Translates to: RLLPKGRVTLWVGGMAGARAALC*SAKCLH Trigger: GTGCAAGCACTTTGCTGATCAGCACAGTGCCGCTCT...GGCCCCAGCCATACCACCCACCCACAGAGTCACCCTGCCTTTGGGTAGGAGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060561.15 |
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| CDS-3UTR GCA 90 bp | GCTCGATCTGTTCACCAGACTTCACGATGGCTTTGTGCTCGGCAGCGGTGGCACTGTGTCGTGGGCATATaGCGGCTGGCCACAGGCACA | + |
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Preference number: 4 (lower is better) Translates to: ARSVHQTSRWLCARQRWHCVVGI*RLATGT Trigger: TGTGCCTGTGGCCAGCCGGCATATGCCCACGACACA...GTGCCACCGCTGCCGAGCACAAAGCCATCGTGAAGTCTGGTGAACAGATCGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121903.2 |
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| CDS-3UTR GCA 90 bp | CAACTGTCACTAAGGGCACAGAAGAGTGCAGCACTGCCCAGCCACATGGTCACCTGTGTCGTGGGCATATaGCGGCTGGCCACAGGCACA | + |
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Preference number: 4 (lower is better) Translates to: QLSLRAQKSAALPSHMVTCVVGI*RLATGT Trigger: TGTGCCTGTGGCCAGCCGGCATATGCCCACGACACA...GGTGACCATGTGGCTGGGCAGTGCTGCACTCTTCTGTGCCCTTAGTGACAGTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060561.15 |
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| CDS-3UTR TCA 90 bp | GATGACGGCTCGATCTGTTCACCAGACTTCACGATGGCTTTGTGCTCGGCAGCGAGAGCGGCACTGTGCTaGTCAGCAAAGTGCTTGCAC | + |
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Preference number: 4 (lower is better) Translates to: DDGSICSPDFTMALCSAARAALC*SAKCLH Trigger: GTGCAAGCACTTTGCTGATCAGCACAGTGCCGCTCT...CGCTGCCGAGCACAAAGCCATCGTGAAGTCTGGTGAACAGATCGAGCCGTCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121903.2 |
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| CDS-3UTR TCA 90 bp | ACCCCACTCCCCTGTCAGAAGCCATCAACTGTGAAGAGCTACACTTCAGCATCCCCTACCGGTTTTCCCTaGGCCAGCCTTTCTTGCCGT | + |
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Preference number: 4 (lower is better) Translates to: TPLPCQKPSTVKSYTSASPTGFP*ASLSCR Trigger: ACGGCAAGAAAGGCTGGCTCAGGGAAAACCGGTAGG...GGATGCTGAAGTGTAGCTCTTCACAGTTGATGGCTTCTGACAGGGGAGTGGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000060561.15 |
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| CDS-3UTR CCA 90 bp | GATGACGGCTCGATCTGTTCACCAGACTTCACGATGGCTTTGTGCTCGGCAGCGCTGCAGCGAATAGGCTaGGTACCATTCAGAGGGACA | + |
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Preference number: 4 (lower is better) Translates to: DDGSICSPDFTMALCSAALQRIG*VPFRGT Trigger: TGTCCCTCTGAATGGTACCCAGCCTATTCGCTGCAG...CGCTGCCGAGCACAAAGCCATCGTGAAGTCTGGTGAACAGATCGAGCCGTCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121903.2 |
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| CDS-3UTR GCA 90 bp | CTACCCAAAGGCAGGGTGACTCTGTGGGTGGGTGGTATGGCTGGGGCCATAATAGGCACTTTTCCTTTCTaGTTAGCAGCCTTTTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: LPKGRVTLWVGGMAGAIIGTFPF*LAAFSS Trigger: GCTGGAAAAGGCTGCTAAGCAGAAAGGAAAAGTGCC...TATTATGGCCCCAGCCATACCACCCACCCACAGAGTCACCCTGCCTTTGGGTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000060561.15 |
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| CDS-3UTR TCA 90 bp | GCCAGGCTGTGCTACCCAATAGACATCTTTAAAAGGCATAGAAAGTGCTTTAAGCCTACCGGTTTTCCCTaGGCCAGCCTTTCTTGCCGT | + |
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Preference number: 4 (lower is better) Translates to: ARLCYPIDIFKRHRKCFKPTGFP*ASLSCR Trigger: ACGGCAAGAAAGGCTGGCTCAGGGAAAACCGGTAGG...CTTAAAGCACTTTCTATGCCTTTTAAAGATGTCTATTGGGTAGCACAGCCTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060561.15 ENSMUST00000121903.2 |
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| CDS-3UTR CCA 90 bp | AACAAAGAACAGGTAGGGCCAGTCCTTAGCCAACTGGGAGGTGAGGCCCAGCAGAGCTTTATCCTCTCCTaGTACTGTCTTTCAAAGTAT | + |
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Preference number: 4 (lower is better) Translates to: NKEQVGPVLSQLGGEAQQSFILS*YCLSKY Trigger: ATACTTTGAAAGACAGTACCAGGAGAGGATAAAGCT...CTGCTGGGCCTCACCTCCCAGTTGGCTAAGGACTGGCCCTACCTGTTCTTTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060561.15 |
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| CDS-3UTR CCA 90 bp | CAGAAGCCATCAACTGTGAAGAGCTACACTTCAGCATCCCTAGCACAGTTTTTACTGCAGCGAATAGGCTaGGTACCATTCAGAGGGACA | + |
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Preference number: 4 (lower is better) Translates to: QKPSTVKSYTSASLAQFLLQRIG*VPFRGT Trigger: TGTCCCTCTGAATGGTACCCAGCCTATTCGCTGCAG...TAAAAACTGTGCTAGGGATGCTGAAGTGTAGCTCTTCACAGTTGATGGCTTCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060561.15 |
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| 3UTR CAA 72 bp | CAATGTCTCTCATTCTCAACTGTGAGTCTGAAGTCATaGAAAATACTGCAAAGAAGCTTCCTTGTCCGTAGC | + |
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Preference number: 4 (lower is better) Translates to: QCLSFSTVSLKS*KILQRSFLVRS Trigger: GCTACGGACAAGGAAGCTTCTTTGCAGTATTTTCAATGACTTCAGACTCACAGTTGAGAATGAGAGACATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060561.15 |
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| 3UTR CAA 72 bp | GGGTGTTGCACAAACAGCTTTACATGCAAATCCATATaGCAACTAGTAATTGGTCTGATTCAATGTTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: GCCTNSFTCKSI*QLVIGLIQCFW Trigger: CCAGAAACATTGAATCAGACCAATTACTAGTTGCAATATGGATTTGCATGTAAAGCTGTTTGTGCAACACCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060561.15 |
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| 3UTR CAA 72 bp | TGCCATCTTTCCCATCTCTCCTTGTATTTTTATTCATaGAGGTGGCACTGCAAACAACAATATGTCATACAG | + |
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Preference number: 4 (lower is better) Translates to: CHLSHLSLYFYS*RWHCKQQYVIQ Trigger: CTGTATGACATATTGTTGTTTGCAGTGCCACCTCAATGAATAAAAATACAAGGAGAGATGGGAAAGATGGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060561.15 |
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| CDS GCA 90 bp | AGCCAGCCTTTCTTGCCGTGTTTCCACCACTGTGTCGTGGGCATATaGCGGCTGGCCACAGGCACAAGTGTAGCAGCTGTGGAAGCCCGA | + |
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Preference number: 5 (lower is better) Translates to: SQPFLPCFHHCVVGI*RLATGTSVAAVEAR Trigger: TCGGGCTTCCACAGCTGCTACACTTGTGCCTGTGGCCAGCCGGCATATGCCCACGACACAGTGGTGGAAACACGGCAAGAAAGGCTGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060561.15 ENSMUST00000121903.2 |
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| CDS CCA 90 bp | GGTAAGCCTTGCACCGGCAACCACTCACTCGGCACGGCAGGGCAATaGGACGCTGCTGTGGGATCGTTTCAAAGTCAGTTTTGTGCTGTT | + |
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Preference number: 5 (lower is better) Translates to: GKPCTGNHSLGTAGQ*DAAVGSFQSQFCAV Trigger: AACAGCACAAAACTGACTTTGAAACGATCCCACAGCAGCGTCCCATTGCCCTGCCGTGCCGAGTGAGTGGTTGCCGGTGCAAGGCTTACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060561.15 ENSMUST00000121903.2 ENSMUST00000134786.2 |
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| CDS-3UTR CAA 90 bp | GATGACGGCTCGATCTGTTCACCAGACTTCACGATGGCTTTGTGCTCGGCAGCGCTGAGCCAGCCTTTCTaGCCGTGTTTCCACCACTGT | + |
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Preference number: 5 (lower is better) Translates to: DDGSICSPDFTMALCSAALSQPF*PCFHHC Trigger: ACAGTGGTGGAAACACGGCAAGAAAGGCTGGCTCAG...CGCTGCCGAGCACAAAGCCATCGTGAAGTCTGGTGAACAGATCGAGCCGTCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121903.2 |
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| CDS TCA 90 bp | CACTTGGAGCAGGCATTGCATGTGAAGCCAAGAGCGGCACTGTGCTaGTCAGCAAAGTGCTTGCACCTGCAGCGAATAGGCTGGGTACCA | + |
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Preference number: 5 (lower is better) Translates to: HLEQALHVKPRAALC*SAKCLHLQRIGWVP Trigger: TGGTACCCAGCCTATTCGCTGCAGGTGCAAGCACTTTGCTGATCAGCACAGTGCCGCTCTTGGCTTCACATGCAATGCCTGCTCCAAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060561.15 ENSMUST00000121903.2 |
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| CDS CCA 90 bp | CCGGCAACCACTCACTCGGCACGGCAGGGCAATGGGACGCTGCTGTaGGATCGTTTCAAAGTCAGTTTTGTGCTGTTTATACCTATGGGT | + |
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Preference number: 5 (lower is better) Translates to: PATTHSARQGNGTLL*DRFKVSFVLFIPMG Trigger: ACCCATAGGTATAAACAGCACAAAACTGACTTTGAAACGATCCCACAGCAGCGTCCCATTGCCCTGCCGTGCCGAGTGAGTGGTTGCCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060561.15 ENSMUST00000121903.2 ENSMUST00000134786.2 |
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| CDS-3UTR CAA 90 bp | GATGACGGCTCGATCTGTTCACCAGACTTCACGATGGCTTTGTGCTCGGCAGCGTGCAATCCATTCCTGTaGGTGACCGCCAACTCACAA | + |
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Preference number: 5 (lower is better) Translates to: DDGSICSPDFTMALCSAACNPFL*VTANSQ Trigger: TTGTGAGTTGGCGGTCACCAACAGGAATGGATTGCA...CGCTGCCGAGCACAAAGCCATCGTGAAGTCTGGTGAACAGATCGAGCCGTCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121903.2 |
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| CDS TCA 90 bp | CGATGCCACTGTCATCTAAGCGCATGTAGCCTTCTGCCAGGGAGCTaGAACCAGTTAAACCTCCCATTGCCGCATAAGGAACATCCCGTC | + |
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Preference number: 5 (lower is better) Translates to: RCHCHLSACSLLPGS*NQLNLPLPHKEHPV Trigger: GACGGGATGTTCCTTATGCGGCAATGGGAGGTTTAACTGGTTTCAGCTCCCTGGCAGAAGGCTACATGCGCTTAGATGACAGTGGCATCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060561.15 ENSMUST00000121903.2 |
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| CDS GCA 90 bp | TTGCACCGGCAACCACTCACTCGGCACGGCAGGGCAATGGGACGCTaGTGTGGGATCGTTTCAAAGTCAGTTTTGTGCTGTTTATACCTA | + |
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Preference number: 5 (lower is better) Translates to: LHRQPLTRHGRAMGR*CGIVSKSVLCCLYL Trigger: TAGGTATAAACAGCACAAAACTGACTTTGAAACGATCCCACAGCAGCGTCCCATTGCCCTGCCGTGCCGAGTGAGTGGTTGCCGGTGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060561.15 ENSMUST00000121903.2 ENSMUST00000134786.2 |
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| CDS-3UTR CAA 90 bp | AACAAAGAACAGGTAGGGCCAGTCCTTAGCCAACTGGGAGGTGAGGCCCAGCAGAAGAAAGCTGAGTGCTaGGACCTACTTCATTACCGC | + |
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Preference number: 5 (lower is better) Translates to: NKEQVGPVLSQLGGEAQQKKAEC*DLLHYR Trigger: GCGGTAATGAAGTAGGTCCAAGCACTCAGCTTTCTT...CTGCTGGGCCTCACCTCCCAGTTGGCTAAGGACTGGCCCTACCTGTTCTTTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060561.15 |
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| CDS GCA 90 bp | ATGCCATATCATCCTCTTCAGGTTTCCTTAAGGAAGAAAGCTGAGTaGTTGGACCTACTTCATTACCGCCTGCTAGTGGCTGTGGAGAAG | + |
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Preference number: 5 (lower is better) Translates to: MPYHPLQVSLRKKAE*LDLLHYRLLVAVEK Trigger: CTTCTCCACAGCCACTAGCAGGCGGTAATGAAGTAGGTCCAAGCACTCAGCTTTCTTCCTTAAGGAAACCTGAAGAGGATGATATGGCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060561.15 |
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| CDS TCA 90 bp | AAGTATGCCATATCATCCTCTTCAGGTTTCCTTAAGGAAGAAAGCTaGGTGCTTGGACCTACTTCATTACCGCCTGCTAGTGGCTGTGGA | + |
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Preference number: 5 (lower is better) Translates to: KYAISSSSGFLKEES*VLGPTSLPPASGCG Trigger: TCCACAGCCACTAGCAGGCGGTAATGAAGTAGGTCCAAGCACTCAGCTTTCTTCCTTAAGGAAACCTGAAGAGGATGATATGGCATACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060561.15 |
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| CDS-3UTR CAA 90 bp | AGCACAGTTTTTAAGTACTCTCTTAATGGCTTCCTGTCCAGACTGTTTAGTTTGCTGAGCCAGCCTTTCTaGCCGTGTTTCCACCACTGT | + |
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Preference number: 5 (lower is better) Translates to: STVFKYSLNGFLSRLFSLLSQPF*PCFHHC Trigger: ACAGTGGTGGAAACACGGCAAGAAAGGCTGGCTCAG...CAAACTAAACAGTCTGGACAGGAAGCCATTAAGAGAGTACTTAAAAACTGTGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060561.15 |
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| CDS-3UTR CAA 90 bp | GTGAAGAGCTACACTTCAGCATCCCTAGCACAGTTTTTAAGTACTCTCTTAATGTGCAATCCATTCCTGTaGGTGACCGCCAACTCACAA | + |
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Preference number: 5 (lower is better) Translates to: VKSYTSASLAQFLSTLLMCNPFL*VTANSQ Trigger: TTGTGAGTTGGCGGTCACCAACAGGAATGGATTGCA...CATTAAGAGAGTACTTAAAAACTGTGCTAGGGATGCTGAAGTGTAGCTCTTCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060561.15 |
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| CDS GCA 90 bp | TATACCTATGGGTACAAAAACACAATGTCTCCGGGCCAACAAGTTTaGAATCCATTCCTGTTGGTGACCGCCAACTCACAAATAATCTGT | + |
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Preference number: 5 (lower is better) Translates to: YTYGYKNTMSPGQQV*NPFLLVTANSQIIC Trigger: ACAGATTATTTGTGAGTTGGCGGTCACCAACAGGAATGGATTGCAAACTTGTTGGCCCGGAGACATTGTGTTTTTGTACCCATAGGTATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060561.15 ENSMUST00000121903.2 |
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| CDS GCA 72 bp | ACCAACAATTCTCCGGTACTCCAAGTACTCGTCCACTaGCTCCGCACCACCAGGAGGCAACGTCAGCCGCTC | + |
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Preference number: 6 (lower is better) Translates to: TNNSPVLQVLVH*LRTTRRQRQPL Trigger: GAGCGGCTGACGTTGCCTCCTGGTGGTGCGGAGGCAGTGGACGAGTACTTGGAGTACCGGAGAATTGTTGGT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060561.15 ENSMUST00000121903.2 |
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| CDS GCA 72 bp | TTCTTGCCGTGTTTCCACCACTGTGTCGTGGGCATATaGCGGCTGGCCACAGGCACAAGTGTAGCAGCTGTG | + |
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Preference number: 6 (lower is better) Translates to: FLPCFHHCVVGI*RLATGTSVAAV Trigger: CACAGCTGCTACACTTGTGCCTGTGGCCAGCCGGCATATGCCCACGACACAGTGGTGGAAACACGGCAAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060561.15 ENSMUST00000121903.2 |
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| CDS TCA 72 bp | CAGGCATTGCATGTGAAGCCAAGAGCGGCACTGTGCTaGTCAGCAAAGTGCTTGCACCTGCAGCGAATAGGC | + |
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Preference number: 6 (lower is better) Translates to: QALHVKPRAALC*SAKCLHLQRIG Trigger: GCCTATTCGCTGCAGGTGCAAGCACTTTGCTGATCAGCACAGTGCCGCTCTTGGCTTCACATGCAATGCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060561.15 ENSMUST00000121903.2 |
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| CDS GCA 72 bp | CAACCACTCACTCGGCACGGCAGGGCAATGGGACGCTaGTGTGGGATCGTTTCAAAGTCAGTTTTGTGCTGT | + |
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Preference number: 6 (lower is better) Translates to: QPLTRHGRAMGR*CGIVSKSVLCC Trigger: ACAGCACAAAACTGACTTTGAAACGATCCCACAGCAGCGTCCCATTGCCCTGCCGTGCCGAGTGAGTGGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060561.15 ENSMUST00000121903.2 ENSMUST00000134786.2 |
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| CDS GCA 72 bp | CCGCAGAGTCCAAAACTTCAACCGAGGGTGCACCGATaGCACTGTCATCTAAGCGCATGTAGCCTTCTGCCA | + |
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Preference number: 6 (lower is better) Translates to: PQSPKLQPRVHR*HCHLSACSLLP Trigger: TGGCAGAAGGCTACATGCGCTTAGATGACAGTGGCATCGGTGCACCCTCGGTTGAAGTTTTGGACTCTGCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060561.15 ENSMUST00000121903.2 |
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| CDS CCA 72 bp | ATGGTGCGTGCATGGCTCTTAGGAACGGATGGTCCATaGCCGAAACCGCAGAGTCCAAAACTTCAACCGAGG | + |
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Preference number: 6 (lower is better) Translates to: MVRAWLLGTDGP*PKPQSPKLQPR Trigger: CCTCGGTTGAAGTTTTGGACTCTGCGGTTTCGGCCATGGACCATCCGTTCCTAAGAGCCATGCACGCACCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060561.15 ENSMUST00000121903.2 |
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| CDS CCA 72 bp | ACTCACTCGGCACGGCAGGGCAATGGGACGCTGCTGTaGGATCGTTTCAAAGTCAGTTTTGTGCTGTTTATA | + |
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Preference number: 6 (lower is better) Translates to: THSARQGNGTLL*DRFKVSFVLFI Trigger: TATAAACAGCACAAAACTGACTTTGAAACGATCCCACAGCAGCGTCCCATTGCCCTGCCGTGCCGAGTGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060561.15 ENSMUST00000121903.2 ENSMUST00000134786.2 |
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| CDS TCA 72 bp | TGTCATCTAAGCGCATGTAGCCTTCTGCCAGGGAGCTaGAACCAGTTAAACCTCCCATTGCCGCATAAGGAA | + |
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Preference number: 6 (lower is better) Translates to: CHLSACSLLPGS*NQLNLPLPHKE Trigger: TTCCTTATGCGGCAATGGGAGGTTTAACTGGTTTCAGCTCCCTGGCAGAAGGCTACATGCGCTTAGATGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060561.15 ENSMUST00000121903.2 |
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| CDS GCA 72 bp | GGGTACAAAAACACAATGTCTCCGGGCCAACAAGTTTaGAATCCATTCCTGTTGGTGACCGCCAACTCACAA | + |
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Preference number: 6 (lower is better) Translates to: GYKNTMSPGQQV*NPFLLVTANSQ Trigger: TTGTGAGTTGGCGGTCACCAACAGGAATGGATTGCAAACTTGTTGGCCCGGAGACATTGTGTTTTTGTACCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060561.15 ENSMUST00000121903.2 |
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| CDS CAA 72 bp | TGGGTACAAAAACACAATGTCTCCGGGCCAACAAGTTaGCAATCCATTCCTGTTGGTGACCGCCAACTCACA | + |
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Preference number: 6 (lower is better) Translates to: WVQKHNVSGPTS*QSIPVGDRQLT Trigger: TGTGAGTTGGCGGTCACCAACAGGAATGGATTGCAAACTTGTTGGCCCGGAGACATTGTGTTTTTGTACCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060561.15 ENSMUST00000121903.2 |
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| CDS CAA 72 bp | ATGTCTCCGGGCCAACAAGTTTGCAATCCATTCCTGTaGGTGACCGCCAACTCACAAATAATCTGTTCTGTA | + |
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Preference number: 6 (lower is better) Translates to: MSPGQQVCNPFL*VTANSQIICSV Trigger: TACAGAACAGATTATTTGTGAGTTGGCGGTCACCAACAGGAATGGATTGCAAACTTGTTGGCCCGGAGACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060561.15 ENSMUST00000121903.2 |
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| CDS CAA 90 bp | AAAAACACAATGTCTCCGGGCCAACAAGTTTGCAATCCATTCCTGTaGGTGACCGCCAACTCACAAATAATCTGTTCTGTAAACGCATGG | + |
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Preference number: 6 (lower is better) Translates to: KNTMSPGQQVCNPFL*VTANSQIICSVNAW Trigger: CCATGCGTTTACAGAACAGATTATTTGTGAGTTGGCGGTCACCAACAGGAATGGATTGCAAACTTGTTGGCCCGGAGACATTGTGTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060561.15 ENSMUST00000121903.2 |
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| CDS TCA 72 bp | ATATCATCCTCTTCAGGTTTCCTTAAGGAAGAAAGCTaGGTGCTTGGACCTACTTCATTACCGCCTGCTAGT | + |
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Preference number: 6 (lower is better) Translates to: ISSSSGFLKEES*VLGPTSLPPAS Trigger: ACTAGCAGGCGGTAATGAAGTAGGTCCAAGCACTCAGCTTTCTTCCTTAAGGAAACCTGAAGAGGATGATAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060561.15 |
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| CDS CAA 90 bp | TTATACCTATGGGTACAAAAACACAATGTCTCCGGGCCAACAAGTTaGCAATCCATTCCTGTTGGTGACCGCCAACTCACAAATAATCTG | + |
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Preference number: 6 (lower is better) Translates to: LYLWVQKHNVSGPTS*QSIPVGDRQLTNNL Trigger: CAGATTATTTGTGAGTTGGCGGTCACCAACAGGAATGGATTGCAAACTTGTTGGCCCGGAGACATTGTGTTTTTGTACCCATAGGTATAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060561.15 ENSMUST00000121903.2 |
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