Pregenerated sensors for FAM220A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000118332Ensembl transcript IDs: ENSMUST00000067145.12, ENSMUST00000101434.5, ENSMUST00000118121.2, ENSMUST00000119488.2, ENSMUST00000169329.8, ENSMUST00000196487.2, ENSMUST00000200267.2
Found 209 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAAGGCGTAGCCTACAGGCCTCCACTTCCATCAGATGGCCAGAGGTaGGCGGAGGCAGGCGGCATCCGGACGCTAGCCCTTGAGGATGGG | + |
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Preference number: 1 (lower is better) Translates to: EGVAYRPPLPSDGQR*AEAGGIRTLALEDG Trigger: CCCATCCTCAAGGGCTAGCGTCCGGATGCCGCCTGCCTCCGCTCACCTCTGGCCATCTGATGGAAGTGGAGGCCTGTAGGCTACGCCTTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000067145.12 ENSMUST00000101434.5 ENSMUST00000119488.2 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
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| 3UTR GCA 90 bp | GGCCAGGCAGACACCCAGGGTCCCTCTCCCAGCCTTCATGCTCTGTaGCCTTTGATGCAGGGAGTCGGGGTGAGGCCTATCAGTCAAGGA | + |
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Preference number: 1 (lower is better) Translates to: GQADTQGPSPSLHAL*PLMQGVGVRPISQG Trigger: TCCTTGACTGATAGGCCTCACCCCGACTCCCTGCATCAAAGGGCACAGAGCATGAAGGCTGGGAGAGGGACCCTGGGTGTCTGCCTGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101434.5 ENSMUST00000119488.2 |
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| 3UTR CCA 90 bp | ACAAGAAGTGGAAGGCGTAGCCTACAGGCCTCCACTTCCATCAGATaGCCAGAGGTGAGCGGAGGCAGGCGGCATCCGGACGCTAGCCCT | + |
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Preference number: 1 (lower is better) Translates to: TRSGRRSLQASTSIR*PEVSGGRRHPDASP Trigger: AGGGCTAGCGTCCGGATGCCGCCTGCCTCCGCTCACCTCTGGCCATCTGATGGAAGTGGAGGCCTGTAGGCTACGCCTTCCACTTCTTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000067145.12 ENSMUST00000101434.5 ENSMUST00000119488.2 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
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| 3UTR GCA 90 bp | ACTGTTTGGCCAGGCAGACACCCAGGGTCCCTCTCCCAGCCTTCATaGTCTGTGCCCTTTGATGCAGGGAGTCGGGGTGAGGCCTATCAG | + |
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Preference number: 1 (lower is better) Translates to: TVWPGRHPGSLSQPS*SVPFDAGSRGEAYQ Trigger: CTGATAGGCCTCACCCCGACTCCCTGCATCAAAGGGCACAGAGCATGAAGGCTGGGAGAGGGACCCTGGGTGTCTGCCTGGCCAAACAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101434.5 ENSMUST00000119488.2 |
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| 3UTR GCA 90 bp | TCACTTCCTAGTGCATCCCCGATGCCATGGGACATCCCGGCTAGTTaGTCTTCTGAAGGAGCAGGGGACAGAGCCACAGCCTTGCCGAGG | + |
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Preference number: 1 (lower is better) Translates to: SLPSASPMPWDIPAS*SSEGAGDRATALPR Trigger: CCTCGGCAAGGCTGTGGCTCTGTCCCCTGCTCCTTCAGAAGAGCAACTAGCCGGGATGTCCCATGGCATCGGGGATGCACTAGGAAGTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000101434.5 ENSMUST00000119488.2 |
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| 3UTR TCA 90 bp | TCAGTTTTGGATGGCCTGGCCGTCCTGACACCCAGGACTCTCCTTTaGGGTACTGTCCACGGTTGTCTGTGGCTCTGGGCTCTCTTCCTG | + |
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Preference number: 1 (lower is better) Translates to: SVLDGLAVLTPRTLL*GTVHGCLWLWALFL Trigger: CAGGAAGAGAGCCCAGAGCCACAGACAACCGTGGACAGTACCTCAAAGGAGAGTCCTGGGTGTCAGGACGGCCAGGCCATCCAAAACTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101434.5 ENSMUST00000119488.2 |
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| 3UTR TCA 90 bp | GGGCTGAACTCCTCCCCACTGATCCCTTCAGAGACTGAAGCACTTTaGAGCCACCATGATGCAGGAGGCTGGCCTTGCTCTGACCATGCT | + |
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Preference number: 1 (lower is better) Translates to: GLNSSPLIPSETEAL*SHHDAGGWPCSDHA Trigger: AGCATGGTCAGAGCAAGGCCAGCCTCCTGCATCATGGTGGCTTCAAAGTGCTTCAGTCTCTGAAGGGATCAGTGGGGAGGAGTTCAGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101434.5 ENSMUST00000119488.2 |
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| 3UTR CCA 90 bp | ACTGCAACTCGGGCGGAAGGAGGGGGACACGTGAGAAGGGACCTCTaGCCGAGTCAGTACAGTGCAGAAATGGCAAGCAAGACTCTTCAT | + |
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Preference number: 1 (lower is better) Translates to: TATRAEGGGHVRRDL*PSQYSAEMASKTLH Trigger: ATGAAGAGTCTTGCTTGCCATTTCTGCACTGTACTGACTCGGCCAGAGGTCCCTTCTCACGTGTCCCCCTCCTTCCGCCCGAGTTGCAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000067145.12 ENSMUST00000101434.5 ENSMUST00000119488.2 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
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| 3UTR CCA 90 bp | TGCTTCATTTCTGAGGCTGCTGCCCCCGTGGCCCGTGACTTTCCATaGCTATCTGCTACAGGCTGGTCTGTCCAAGAAGGCACAACTGAT | + |
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Preference number: 1 (lower is better) Translates to: CFISEAAAPVARDFP*LSATGWSVQEGTTD Trigger: ATCAGTTGTGCCTTCTTGGACAGACCAGCCTGTAGCAGATAGCCATGGAAAGTCACGGGCCACGGGGGCAGCAGCCTCAGAAATGAAGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101434.5 ENSMUST00000119488.2 |
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| 3UTR CCA 90 bp | CTTGGTGGTTCACCTCTTAGGAATCCCACTTCCCTCAGTTTTGGATaGCCTGGCCGTCCTGACACCCAGGACTCTCCTTTGAGGTACTGT | + |
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Preference number: 1 (lower is better) Translates to: LGGSPLRNPTSLSFG*PGRPDTQDSPLRYC Trigger: ACAGTACCTCAAAGGAGAGTCCTGGGTGTCAGGACGGCCAGGCCATCCAAAACTGAGGGAAGTGGGATTCCTAAGAGGTGAACCACCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101434.5 ENSMUST00000119488.2 |
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| 3UTR CCA 90 bp | GAGATGGCTCAGCTGTTAAGGGTGCTTGCTGTTCTTGCAGAGACCTaGACTCAAGCAGTTCACAACTGCCTGCAACTCCAGCTCCAGAGG | + |
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Preference number: 1 (lower is better) Translates to: EMAQLLRVLAVLAET*TQAVHNCLQLQLQR Trigger: CCTCTGGAGCTGGAGTTGCAGGCAGTTGTGAACTGCTTGAGTCCAGGTCTCTGCAAGAACAGCAAGCACCCTTAACAGCTGAGCCATCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118121.2 |
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| 3UTR CCA 90 bp | CAAAGCCTACTCAGTCATCTTGGTGCAAGCTGGGCGAGGGGTGAGTaGAAGTCATATCCACACATGAGAAGGCTAGGCATGGGCATGCTG | + |
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Preference number: 1 (lower is better) Translates to: QSLLSHLGASWARGE*KSYPHMRRLGMGML Trigger: CAGCATGCCCATGCCTAGCCTTCTCATGTGTGGATATGACTTCCACTCACCCCTCGCCCAGCTTGCACCAAGATGACTGAGTAGGCTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118121.2 |
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| 3UTR GCA 90 bp | TTGCTGTTCTTGCAGAGACCTGGACTCAAGCAGTTCACAACTGCCTaGAACTCCAGCTCCAGAGGATCCAGTGACCAGAATCTTCTGGCT | + |
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Preference number: 1 (lower is better) Translates to: LLFLQRPGLKQFTTA*NSSSRGSSDQNLLA Trigger: AGCCAGAAGATTCTGGTCACTGGATCCTCTGGAGCTGGAGTTGCAGGCAGTTGTGAACTGCTTGAGTCCAGGTCTCTGCAAGAACAGCAA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118121.2 |
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| 3UTR GCA 90 bp | AGTGGATCTCAATGTGAACCTGGACTCAAGCAGTTCACAACTGCCTaGAACTCCAGCTCCAGAGGATCCAGTGACCAGAATCTTCTGGCT | + |
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Preference number: 1 (lower is better) Translates to: SGSQCEPGLKQFTTA*NSSSRGSSDQNLLA Trigger: AGCCAGAAGATTCTGGTCACTGGATCCTCTGGAGCTGGAGTTGCAGGCAGTTGTGAACTGCTTGAGTCCAGGTTCACATTGAGATCCACT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101434.5 |
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| 3UTR TCA 90 bp | GCTAGGCATGGGCATGCTGTGGTCCTGTTTAAGGATGCCAAGACATaGCAGATATGTTCAGAAGACTTCTCTAGGGAGCCAGAGAGATGG | + |
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Preference number: 1 (lower is better) Translates to: ARHGHAVVLFKDAKT*QICSEDFSREPERW Trigger: CCATCTCTCTGGCTCCCTAGAGAAGTCTTCTGAACATATCTGTCATGTCTTGGCATCCTTAAACAGGACCACAGCATGCCCATGCCTAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118121.2 |
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| 3UTR GCA 90 bp | CTCAATTTAATATTGCAACTTCTCCAAAGTGCCTCCATTAAAAACTaGAACTCGGGCGGAAGGAGGGGGACACGTGAGAAGGGACCTCTG | + |
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Preference number: 1 (lower is better) Translates to: LNLILQLLQSASIKN*NSGGRRGTREKGPL Trigger: CAGAGGTCCCTTCTCACGTGTCCCCCTCCTTCCGCCCGAGTTGCAGTTTTTAATGGAGGCACTTTGGAGAAGTTGCAATATTAAATTGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000067145.12 ENSMUST00000101434.5 ENSMUST00000119488.2 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
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| 3UTR TCA 90 bp | CCATCTGAAGAACTTGAGAGTTTTCTCATCTTCTACTGTTTCCTCTaGAAGCCCGGGATTGAAACGGTCAAGGGACACACACCTCAGCTC | + |
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Preference number: 1 (lower is better) Translates to: PSEELESFLIFYCFL*KPGIETVKGHTPQL Trigger: GAGCTGAGGTGTGTGTCCCTTGACCGTTTCAATCCCGGGCTTTCAGAGGAAACAGTAGAAGATGAGAAAACTCTCAAGTTCTTCAGATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101434.5 ENSMUST00000119488.2 |
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| 3UTR-3UTR TCA 90 bp | AGGCGTAGCCTACAGGCCTCCACTTCCATCAGATGGCCAGAGGTGAGCGGAGGCTCAGATGGCCAGAGGTaGGCGGAGGCAGGCGGCATC | + |
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Preference number: 2 (lower is better) Translates to: RRSLQASTSIRWPEVSGGSDGQR*AEAGGI Trigger: GATGCCGCCTGCCTCCGCTCACCTCTGGCCATCTGA...GCCTCCGCTCACCTCTGGCCATCTGATGGAAGTGGAGGCCTGTAGGCTACGCCT 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000067145.12 ENSMUST00000101434.5 ENSMUST00000119488.2 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
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| 3UTR-3UTR GCA 90 bp | AGGCGTAGCCTACAGGCCTCCACTTCCATCAGATGGCCAGAGGTGAGCGGAGGCACAGAGCCACAGCCTTaGCGAGGGAGGCTGCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: RRSLQASTSIRWPEVSGGTEPQP*RGRLLG Trigger: CCCCAGCAGCCTCCCTCGGCAAGGCTGTGGCTCTGT...GCCTCCGCTCACCTCTGGCCATCTGATGGAAGTGGAGGCCTGTAGGCTACGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101434.5 ENSMUST00000119488.2 |
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| 3UTR-3UTR TCA 90 bp | TGCAACTCGGGCGGAAGGAGGGGGACACGTGAGAAGGGACCTCTGGCCGAGTCAAGATTGCAGAGCCAGTaGCCCCACGACTATCTGCGG | + |
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Preference number: 2 (lower is better) Translates to: CNSGGRRGTREKGPLAESRLQSQ*PHDYLR Trigger: CCGCAGATAGTCGTGGGGTCACTGGCTCTGCAATCT...TGACTCGGCCAGAGGTCCCTTCTCACGTGTCCCCCTCCTTCCGCCCGAGTTGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000101434.5 ENSMUST00000119488.2 |
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| 3UTR-3UTR CCA 90 bp | TGCAACTCGGGCGGAAGGAGGGGGACACGTGAGAAGGGACCTCTGGCCGAGTCAGTCCACGGTTGTCTGTaGCTCTGGGCTCTCTTCCTG | + |
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Preference number: 2 (lower is better) Translates to: CNSGGRRGTREKGPLAESVHGCL*LWALFL Trigger: CAGGAAGAGAGCCCAGAGCCACAGACAACCGTGGAC...TGACTCGGCCAGAGGTCCCTTCTCACGTGTCCCCCTCCTTCCGCCCGAGTTGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101434.5 ENSMUST00000119488.2 |
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| 3UTR CAA 90 bp | GCAGACACCCAGGGTCCCTCTCCCAGCCTTCATGCTCTGTGCCCTTaGATGCAGGGAGTCGGGGTGAGGCCTATCAGTCAAGGATGGCCT | + |
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Preference number: 2 (lower is better) Translates to: ADTQGPSPSLHALCP*MQGVGVRPISQGWP Trigger: AGGCCATCCTTGACTGATAGGCCTCACCCCGACTCCCTGCATCAAAGGGCACAGAGCATGAAGGCTGGGAGAGGGACCCTGGGTGTCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101434.5 ENSMUST00000119488.2 |
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| 3UTR-3UTR TCA 90 bp | AGGCGTAGCCTACAGGCCTCCACTTCCATCAGATGGCCAGAGGTGAGCGGAGGCCCGGACGCTAGCCCTTaGGGATGGGTCTCCATGATT | + |
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Preference number: 2 (lower is better) Translates to: RRSLQASTSIRWPEVSGGPDASP*GWVSMI Trigger: AATCATGGAGACCCATCCTCAAGGGCTAGCGTCCGG...GCCTCCGCTCACCTCTGGCCATCTGATGGAAGTGGAGGCCTGTAGGCTACGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000067145.12 ENSMUST00000101434.5 ENSMUST00000119488.2 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGGCCTCCACTTCCATCAGATGGCCAGAGGTGAGCGGAGGCAGGCGGCATCCCCACCGAGGTGCGTCTaGTTCACAGGAAACAACAGG | + |
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Preference number: 2 (lower is better) Translates to: TGLHFHQMARGERRQAASPPRCV*FTGNNR Trigger: CCTGTTGTTTCCTGTGAACCAGACGCACCTCGGTGG...GGATGCCGCCTGCCTCCGCTCACCTCTGGCCATCTGATGGAAGTGGAGGCCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000067145.12 ENSMUST00000101434.5 ENSMUST00000119488.2 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
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| 3UTR-3UTR TCA 90 bp | CTACAGGCCTCCACTTCCATCAGATGGCCAGAGGTGAGCGGAGGCAGGCGGCATGGAAACAACAGGAACTaGACGGCTGCAGCATACGCC | + |
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Preference number: 2 (lower is better) Translates to: LQASTSIRWPEVSGGRRHGNNRN*TAAAYA Trigger: GGCGTATGCTGCAGCCGTTCAGTTCCTGTTGTTTCC...ATGCCGCCTGCCTCCGCTCACCTCTGGCCATCTGATGGAAGTGGAGGCCTGTAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000067145.12 ENSMUST00000101434.5 ENSMUST00000119488.2 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
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| 3UTR CAA 90 bp | GGCCGTCCTGACACCCAGGACTCTCCTTTGAGGTACTGTCCACGGTaGTCTGTGGCTCTGGGCTCTCTTCCTGGCCAGTCACTTCCTAGT | + |
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Preference number: 2 (lower is better) Translates to: GRPDTQDSPLRYCPR*SVALGSLPGQSLPS Trigger: ACTAGGAAGTGACTGGCCAGGAAGAGAGCCCAGAGCCACAGACAACCGTGGACAGTACCTCAAAGGAGAGTCCTGGGTGTCAGGACGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101434.5 ENSMUST00000119488.2 |
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| 3UTR-3UTR TCA 90 bp | AGTCAGGGTCCCCCAACTCTCCCATGGCTGTTTTTAACTCTGTCTTGGGTAGGGTCAGATGGCCAGAGGTaGGCGGAGGCAGGCGGCATC | + |
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Preference number: 2 (lower is better) Translates to: SQGPPTLPWLFLTLSWVGSDGQR*AEAGGI Trigger: GATGCCGCCTGCCTCCGCTCACCTCTGGCCATCTGA...CCCTACCCAAGACAGAGTTAAAAACAGCCATGGGAGAGTTGGGGGACCCTGACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000067145.12 ENSMUST00000101434.5 ENSMUST00000119488.2 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
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| 3UTR-3UTR TCA 90 bp | GGGTCCCCCAACTCTCCCATGGCTGTTTTTAACTCTGTCTTGGGTAGGGAGGCTAAGGAGGGGGACACGTaGGAAGGGACCTCTGGCCGA | + |
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Preference number: 2 (lower is better) Translates to: GSPNSPMAVFNSVLGREAKEGDT*EGTSGR Trigger: TCGGCCAGAGGTCCCTTCTCACGTGTCCCCCTCCTT...AGCCTCCCTACCCAAGACAGAGTTAAAAACAGCCATGGGAGAGTTGGGGGACCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 6 transcripts: ENSMUST00000067145.12 ENSMUST00000101434.5 ENSMUST00000119488.2 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
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| 3UTR-3UTR GCA 90 bp | TGCAACTCGGGCGGAAGGAGGGGGACACGTGAGAAGGGACCTCTGGCCGAGTCAGCCGAGTCAGTACAGTaGAGAAATGGCAAGCAAGAC | + |
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Preference number: 2 (lower is better) Translates to: CNSGGRRGTREKGPLAESAESVQ*RNGKQD Trigger: GTCTTGCTTGCCATTTCTGCACTGTACTGACTCGGC...TGACTCGGCCAGAGGTCCCTTCTCACGTGTCCCCCTCCTTCCGCCCGAGTTGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000067145.12 ENSMUST00000101434.5 ENSMUST00000119488.2 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
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| 3UTR-3UTR GCA 90 bp | CCAGGGTCCCTCTCCCAGCCTTCATGCTCTGTGCCCTTTGATGCAGGGAGTCGGCAGTTCACAACTGCCTaGAACTCCAGCTCCAGAGGA | + |
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Preference number: 2 (lower is better) Translates to: PGSLSQPSCSVPFDAGSRQFTTA*NSSSRG Trigger: TCCTCTGGAGCTGGAGTTGCAGGCAGTTGTGAACTG...CCGACTCCCTGCATCAAAGGGCACAGAGCATGAAGGCTGGGAGAGGGACCCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101434.5 |
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| 3UTR-3UTR GCA 90 bp | AGGCGTAGCCTACAGGCCTCCACTTCCATCAGATGGCCAGAGGTGAGCGGAGGCGCAGGAGGCTGGCCTTaGTCTGACCATGCTTCATTT | + |
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Preference number: 2 (lower is better) Translates to: RRSLQASTSIRWPEVSGGAGGWP*SDHASF Trigger: AAATGAAGCATGGTCAGAGCAAGGCCAGCCTCCTGC...GCCTCCGCTCACCTCTGGCCATCTGATGGAAGTGGAGGCCTGTAGGCTACGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101434.5 ENSMUST00000119488.2 |
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| 3UTR CAA 90 bp | CTCAGTTTTGGATGGCCTGGCCGTCCTGACACCCAGGACTCTCCTTaGAGGTACTGTCCACGGTTGTCTGTGGCTCTGGGCTCTCTTCCT | + |
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Preference number: 2 (lower is better) Translates to: LSFGWPGRPDTQDSP*RYCPRLSVALGSLP Trigger: AGGAAGAGAGCCCAGAGCCACAGACAACCGTGGACAGTACCTCAAAGGAGAGTCCTGGGTGTCAGGACGGCCAGGCCATCCAAAACTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101434.5 ENSMUST00000119488.2 |
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| 3UTR-3UTR TCA 90 bp | GTGCCTCCATTAAAAACTGCAACTCGGGCGGAAGGAGGGGGACACGTGAGAAGGCCGGACGCTAGCCCTTaGGGATGGGTCTCCATGATT | + |
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Preference number: 2 (lower is better) Translates to: VPPLKTATRAEGGGHVRRPDASP*GWVSMI Trigger: AATCATGGAGACCCATCCTCAAGGGCTAGCGTCCGG...CCTTCTCACGTGTCCCCCTCCTTCCGCCCGAGTTGCAGTTTTTAATGGAGGCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000067145.12 ENSMUST00000101434.5 ENSMUST00000119488.2 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
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| 3UTR-3UTR TCA 90 bp | CCTGACACCCAGGACTCTCCTTTGAGGTACTGTCCACGGTTGTCTGTGGCTCTGCCGGACGCTAGCCCTTaGGGATGGGTCTCCATGATT | + |
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Preference number: 2 (lower is better) Translates to: PDTQDSPLRYCPRLSVALPDASP*GWVSMI Trigger: AATCATGGAGACCCATCCTCAAGGGCTAGCGTCCGG...CAGAGCCACAGACAACCGTGGACAGTACCTCAAAGGAGAGTCCTGGGTGTCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101434.5 ENSMUST00000119488.2 |
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| 3UTR-3UTR TCA 90 bp | CAGTCAGGGTCCCCCAACTCTCCCATGGCTGTTTTTAACTCTGTCTTGGGTAGGAAGGAGGGGGACACGTaGGAAGGGACCTCTGGCCGA | + |
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Preference number: 2 (lower is better) Translates to: QSGSPNSPMAVFNSVLGRKEGDT*EGTSGR Trigger: TCGGCCAGAGGTCCCTTCTCACGTGTCCCCCTCCTT...CCTACCCAAGACAGAGTTAAAAACAGCCATGGGAGAGTTGGGGGACCCTGACTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 6 transcripts: ENSMUST00000067145.12 ENSMUST00000101434.5 ENSMUST00000119488.2 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
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| 3UTR-3UTR TCA 90 bp | CTCCAAAGTGCCTCCATTAAAAACTGCAACTCGGGCGGAAGGAGGGGGACACGTATGGCCTGGCCGTCCTaGCACCCAGGACTCTCCTTT | + |
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Preference number: 2 (lower is better) Translates to: LQSASIKNCNSGGRRGTRMAWPS*HPGLSF Trigger: AAAGGAGAGTCCTGGGTGTCAGGACGGCCAGGCCAT...ACGTGTCCCCCTCCTTCCGCCCGAGTTGCAGTTTTTAATGGAGGCACTTTGGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000101434.5 ENSMUST00000119488.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGACACCCAGGACTCTCCTTTGAGGTACTGTCCACGGTTGTCTGTGGCTCTGGTGAGAAGGGACCTCTaGCCGAGTCAGTACAGTGCA | + |
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Preference number: 2 (lower is better) Translates to: PDTQDSPLRYCPRLSVALVRRDL*PSQYSA Trigger: TGCACTGTACTGACTCGGCCAGAGGTCCCTTCTCAC...CAGAGCCACAGACAACCGTGGACAGTACCTCAAAGGAGAGTCCTGGGTGTCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101434.5 ENSMUST00000119488.2 |
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| 3UTR-3UTR CCA 90 bp | GCCTACTCAGTCATCTTGGTGCAAGCTGGGCGAGGGGTGAGTGGAAGTCATATCGTGACCAGAATCTTCTaGCTGCCGCCTCCGCCTCTT | + |
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Preference number: 2 (lower is better) Translates to: AYSVILVQAGRGVSGSHIVTRIF*LPPPPL Trigger: AAGAGGCGGAGGCGGCAGCCAGAAGATTCTGGTCAC...GATATGACTTCCACTCACCCCTCGCCCAGCTTGCACCAAGATGACTGAGTAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118121.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGACACCCAGGACTCTCCTTTGAGGTACTGTCCACGGTTGTCTGTGGCTCTGGCCCGTGACTTTCCATaGCTATCTGCTACAGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: PDTQDSPLRYCPRLSVALARDFP*LSATGW Trigger: CCAGCCTGTAGCAGATAGCCATGGAAAGTCACGGGC...CAGAGCCACAGACAACCGTGGACAGTACCTCAAAGGAGAGTCCTGGGTGTCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101434.5 ENSMUST00000119488.2 |
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| 3UTR-3UTR TCA 90 bp | CTCCAAAGTGCCTCCATTAAAAACTGCAACTCGGGCGGAAGGAGGGGGACACGTGGAAACAACAGGAACTaGACGGCTGCAGCATACGCC | + |
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Preference number: 2 (lower is better) Translates to: LQSASIKNCNSGGRRGTRGNNRN*TAAAYA Trigger: GGCGTATGCTGCAGCCGTTCAGTTCCTGTTGTTTCC...ACGTGTCCCCCTCCTTCCGCCCGAGTTGCAGTTTTTAATGGAGGCACTTTGGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000067145.12 ENSMUST00000101434.5 ENSMUST00000119488.2 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
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| 3UTR-3UTR TCA 90 bp | CAGTCAGGGTCCCCCAACTCTCCCATGGCTGTTTTTAACTCTGTCTTGGGTAGGCCGGACGCTAGCCCTTaGGGATGGGTCTCCATGATT | + |
|
Preference number: 2 (lower is better) Translates to: QSGSPNSPMAVFNSVLGRPDASP*GWVSMI Trigger: AATCATGGAGACCCATCCTCAAGGGCTAGCGTCCGG...CCTACCCAAGACAGAGTTAAAAACAGCCATGGGAGAGTTGGGGGACCCTGACTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000067145.12 ENSMUST00000101434.5 ENSMUST00000119488.2 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| 3UTR-3UTR TCA 90 bp | ATGCTTCATTGCTTCGTTTGCTGTCTGTGTTCTGTCGGCAGGAAAGCTTCAGACTCAGATGGCCAGAGGTaGGCGGAGGCAGGCGGCATC | + |
|
Preference number: 2 (lower is better) Translates to: MLHCFVCCLCSVGRKASDSDGQR*AEAGGI Trigger: GATGCCGCCTGCCTCCGCTCACCTCTGGCCATCTGA...GTCTGAAGCTTTCCTGCCGACAGAACACAGACAGCAAACGAAGCAATGAAGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000067145.12 ENSMUST00000101434.5 ENSMUST00000119488.2 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| 3UTR-3UTR CCA 90 bp | CAGTCAGGGTCCCCCAACTCTCCCATGGCTGTTTTTAACTCTGTCTTGGGTAGGTCCCTCAGTTTTGGATaGCCTGGCCGTCCTGACACC | + |
|
Preference number: 2 (lower is better) Translates to: QSGSPNSPMAVFNSVLGRSLSFG*PGRPDT Trigger: GGTGTCAGGACGGCCAGGCCATCCAAAACTGAGGGA...CCTACCCAAGACAGAGTTAAAAACAGCCATGGGAGAGTTGGGGGACCCTGACTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000101434.5 ENSMUST00000119488.2 |
||
| 3UTR-3UTR TCA 90 bp | CTTCGTTTGCTGTCTGTGTTCTGTCGGCAGGAAAGCTTCAGACTCTTCTGTAATTCAGATGGCCAGAGGTaGGCGGAGGCAGGCGGCATC | + |
|
Preference number: 2 (lower is better) Translates to: LRLLSVFCRQESFRLFCNSDGQR*AEAGGI Trigger: GATGCCGCCTGCCTCCGCTCACCTCTGGCCATCTGA...ATTACAGAAGAGTCTGAAGCTTTCCTGCCGACAGAACACAGACAGCAAACGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000067145.12 ENSMUST00000101434.5 ENSMUST00000119488.2 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| 3UTR-3UTR TCA 90 bp | GAAAATGCTTCATTGCTTCGTTTGCTGTCTGTGTTCTGTCGGCAGGAAAGCTTCTCAGATGGCCAGAGGTaGGCGGAGGCAGGCGGCATC | + |
|
Preference number: 2 (lower is better) Translates to: ENASLLRLLSVFCRQESFSDGQR*AEAGGI Trigger: GATGCCGCCTGCCTCCGCTCACCTCTGGCCATCTGA...GAAGCTTTCCTGCCGACAGAACACAGACAGCAAACGAAGCAATGAAGCATTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000067145.12 ENSMUST00000101434.5 ENSMUST00000119488.2 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
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| 3UTR-3UTR TCA 90 bp | GGAAAATGCTTCATTGCTTCGTTTGCTGTCTGTGTTCTGTCGGCAGGAAAGCTTTCAGATGGCCAGAGGTaGGCGGAGGCAGGCGGCATC | + |
|
Preference number: 2 (lower is better) Translates to: GKCFIASFAVCVLSAGKLSDGQR*AEAGGI Trigger: GATGCCGCCTGCCTCCGCTCACCTCTGGCCATCTGA...AAGCTTTCCTGCCGACAGAACACAGACAGCAAACGAAGCAATGAAGCATTTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000067145.12 ENSMUST00000101434.5 ENSMUST00000119488.2 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| 3UTR-3UTR TCA 90 bp | AGGCGTAGCCTACAGGCCTCCACTTCCATCAGATGGCCAGAGGTGAGCGGAGGCAAGACTCTTCATGACTaGAGCAAGGCTTACAAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: RRSLQASTSIRWPEVSGGKTLHD*SKAYKK Trigger: CTTCTTGTAAGCCTTGCTTCAGTCATGAAGAGTCTT...GCCTCCGCTCACCTCTGGCCATCTGATGGAAGTGGAGGCCTGTAGGCTACGCCT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000067145.12 ENSMUST00000101434.5 ENSMUST00000119488.2 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| 3UTR-3UTR CCA 90 bp | AGTCAGGGTCCCCCAACTCTCCCATGGCTGTTTTTAACTCTGTCTTGGGTAGGGCCACCGAGGTGCGTCTaGTTCACAGGAAACAACAGG | + |
|
Preference number: 2 (lower is better) Translates to: SQGPPTLPWLFLTLSWVGPPRCV*FTGNNR Trigger: CCTGTTGTTTCCTGTGAACCAGACGCACCTCGGTGG...CCCTACCCAAGACAGAGTTAAAAACAGCCATGGGAGAGTTGGGGGACCCTGACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000067145.12 ENSMUST00000101434.5 ENSMUST00000119488.2 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| 3UTR-3UTR CCA 90 bp | CAGTCAGGGTCCCCCAACTCTCCCATGGCTGTTTTTAACTCTGTCTTGGGTAGGGTGAGAAGGGACCTCTaGCCGAGTCAGTACAGTGCA | + |
|
Preference number: 2 (lower is better) Translates to: QSGSPNSPMAVFNSVLGRVRRDL*PSQYSA Trigger: TGCACTGTACTGACTCGGCCAGAGGTCCCTTCTCAC...CCTACCCAAGACAGAGTTAAAAACAGCCATGGGAGAGTTGGGGGACCCTGACTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000067145.12 ENSMUST00000101434.5 ENSMUST00000119488.2 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| 3UTR-3UTR TCA 90 bp | GTCAGTACAGTGCAGAAATGGCAAGCAAGACTCTTCATGACTGAAGCAAGGCTTAAGGAGGGGGACACGTaGGAAGGGACCTCTGGCCGA | + |
|
Preference number: 2 (lower is better) Translates to: VSTVQKWQARLFMTEARLKEGDT*EGTSGR Trigger: TCGGCCAGAGGTCCCTTCTCACGTGTCCCCCTCCTT...AAGCCTTGCTTCAGTCATGAAGAGTCTTGCTTGCCATTTCTGCACTGTACTGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000067145.12 ENSMUST00000101434.5 ENSMUST00000119488.2 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| 3UTR-3UTR CCA 90 bp | AGAGACTTGCTAATCTGGAAGATTGCAGAGCCAGTGACCCCACGACTATCTGCGCCACCGAGGTGCGTCTaGTTCACAGGAAACAACAGG | + |
|
Preference number: 2 (lower is better) Translates to: RDLLIWKIAEPVTPRLSAPPRCV*FTGNNR Trigger: CCTGTTGTTTCCTGTGAACCAGACGCACCTCGGTGG...CGCAGATAGTCGTGGGGTCACTGGCTCTGCAATCTTCCAGATTAGCAAGTCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101434.5 ENSMUST00000119488.2 |
||
| 3UTR-3UTR CCA 90 bp | AGAGACTTGCTAATCTGGAAGATTGCAGAGCCAGTGACCCCACGACTATCTGCGGTGAGAAGGGACCTCTaGCCGAGTCAGTACAGTGCA | + |
|
Preference number: 2 (lower is better) Translates to: RDLLIWKIAEPVTPRLSAVRRDL*PSQYSA Trigger: TGCACTGTACTGACTCGGCCAGAGGTCCCTTCTCAC...CGCAGATAGTCGTGGGGTCACTGGCTCTGCAATCTTCCAGATTAGCAAGTCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101434.5 ENSMUST00000119488.2 |
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| 3UTR-3UTR CCA 90 bp | GGCCGAGTCAGTACAGTGCAGAAATGGCAAGCAAGACTCTTCATGACTGAAGCAGTGACCAGAATCTTCTaGCTGCCGCCTCCGCCTCTT | + |
|
Preference number: 2 (lower is better) Translates to: GRVSTVQKWQARLFMTEAVTRIF*LPPPPL Trigger: AAGAGGCGGAGGCGGCAGCCAGAAGATTCTGGTCAC...TGCTTCAGTCATGAAGAGTCTTGCTTGCCATTTCTGCACTGTACTGACTCGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101434.5 |
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| 3UTR-3UTR TCA 90 bp | GGCCGAGTCAGTACAGTGCAGAAATGGCAAGCAAGACTCTTCATGACTGAAGCAGGAAACAACAGGAACTaGACGGCTGCAGCATACGCC | + |
|
Preference number: 2 (lower is better) Translates to: GRVSTVQKWQARLFMTEAGNNRN*TAAAYA Trigger: GGCGTATGCTGCAGCCGTTCAGTTCCTGTTGTTTCC...TGCTTCAGTCATGAAGAGTCTTGCTTGCCATTTCTGCACTGTACTGACTCGGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000067145.12 ENSMUST00000101434.5 ENSMUST00000119488.2 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
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| 3UTR-3UTR TCA 90 bp | TTAGGACACAATATAAATGACATATACAGTCAGGGTCCCCCAACTCTCCCATGGAAGGAGGGGGACACGTaGGAAGGGACCTCTGGCCGA | + |
|
Preference number: 2 (lower is better) Translates to: LGHNINDIYSQGPPTLPWKEGDT*EGTSGR Trigger: TCGGCCAGAGGTCCCTTCTCACGTGTCCCCCTCCTT...CCATGGGAGAGTTGGGGGACCCTGACTGTATATGTCATTTATATTGTGTCCTAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000067145.12 ENSMUST00000101434.5 ENSMUST00000119488.2 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
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| 3UTR-3UTR GCA 90 bp | GGTGAGTGGAAGTCATATCCACACATGAGAAGGCTAGGCATGGGCATGCTGTGGGCTGTTAAGGGTGCTTaGTGTTCTTGCAGAGACCTG | + |
|
Preference number: 2 (lower is better) Translates to: GEWKSYPHMRRLGMGMLWAVKGA*CSCRDL Trigger: CAGGTCTCTGCAAGAACAGCAAGCACCCTTAACAGC...CCACAGCATGCCCATGCCTAGCCTTCTCATGTGTGGATATGACTTCCACTCACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118121.2 |
||
| 3UTR-3UTR CCA 90 bp | TACAGTCAGGGTCCCCCAACTCTCCCATGGCTGTTTTTAACTCTGTCTTGGGTACCACCGAGGTGCGTCTaGTTCACAGGAAACAACAGG | + |
|
Preference number: 2 (lower is better) Translates to: YSQGPPTLPWLFLTLSWVPPRCV*FTGNNR Trigger: CCTGTTGTTTCCTGTGAACCAGACGCACCTCGGTGG...TACCCAAGACAGAGTTAAAAACAGCCATGGGAGAGTTGGGGGACCCTGACTGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000067145.12 ENSMUST00000101434.5 ENSMUST00000119488.2 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
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| 3UTR-3UTR TCA 90 bp | ATATACAGTCAGGGTCCCCCAACTCTCCCATGGCTGTTTTTAACTCTGTCTTGGGGAAACAACAGGAACTaGACGGCTGCAGCATACGCC | + |
|
Preference number: 2 (lower is better) Translates to: IYSQGPPTLPWLFLTLSWGNNRN*TAAAYA Trigger: GGCGTATGCTGCAGCCGTTCAGTTCCTGTTGTTTCC...CCAAGACAGAGTTAAAAACAGCCATGGGAGAGTTGGGGGACCCTGACTGTATAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 6 transcripts: ENSMUST00000067145.12 ENSMUST00000101434.5 ENSMUST00000119488.2 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
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| 3UTR-3UTR TCA 90 bp | CCTCCATTAAAAACTGCAACTCGGGCGGAAGGAGGGGGACACGTGAGAAGGGACAAGACTCTTCATGACTaGAGCAAGGCTTACAAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: PPLKTATRAEGGGHVRRDKTLHD*SKAYKK Trigger: CTTCTTGTAAGCCTTGCTTCAGTCATGAAGAGTCTT...GTCCCTTCTCACGTGTCCCCCTCCTTCCGCCCGAGTTGCAGTTTTTAATGGAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000067145.12 ENSMUST00000101434.5 ENSMUST00000119488.2 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
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| 3UTR-3UTR GCA 90 bp | TACAGTCAGGGTCCCCCAACTCTCCCATGGCTGTTTTTAACTCTGTCTTGGGTACTCTCCCAGCCTTCATaGTCTGTGCCCTTTGATGCA | + |
|
Preference number: 2 (lower is better) Translates to: YSQGPPTLPWLFLTLSWVLSQPS*SVPFDA Trigger: TGCATCAAAGGGCACAGAGCATGAAGGCTGGGAGAG...TACCCAAGACAGAGTTAAAAACAGCCATGGGAGAGTTGGGGGACCCTGACTGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000101434.5 ENSMUST00000119488.2 |
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| 3UTR-3UTR CCA 90 bp | ATGCTTCATTGCTTCGTTTGCTGTCTGTGTTCTGTCGGCAGGAAAGCTTCAGACGTGAGAAGGGACCTCTaGCCGAGTCAGTACAGTGCA | + |
|
Preference number: 2 (lower is better) Translates to: MLHCFVCCLCSVGRKASDVRRDL*PSQYSA Trigger: TGCACTGTACTGACTCGGCCAGAGGTCCCTTCTCAC...GTCTGAAGCTTTCCTGCCGACAGAACACAGACAGCAAACGAAGCAATGAAGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000067145.12 ENSMUST00000101434.5 ENSMUST00000119488.2 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
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| 3UTR-3UTR CCA 90 bp | GGCCGAGTCAGTACAGTGCAGAAATGGCAAGCAAGACTCTTCATGACTGAAGCAGCACAACTGATGGGCTaGGGTTCCTCTTCTGACTTC | + |
|
Preference number: 2 (lower is better) Translates to: GRVSTVQKWQARLFMTEAAQLMG*GSSSDF Trigger: GAAGTCAGAAGAGGAACCCCAGCCCATCAGTTGTGC...TGCTTCAGTCATGAAGAGTCTTGCTTGCCATTTCTGCACTGTACTGACTCGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101434.5 ENSMUST00000119488.2 |
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| 3UTR-3UTR CCA 90 bp | ATGCTTCATTGCTTCGTTTGCTGTCTGTGTTCTGTCGGCAGGAAAGCTTCAGACGCCCGTGACTTTCCATaGCTATCTGCTACAGGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: MLHCFVCCLCSVGRKASDARDFP*LSATGW Trigger: CCAGCCTGTAGCAGATAGCCATGGAAAGTCACGGGC...GTCTGAAGCTTTCCTGCCGACAGAACACAGACAGCAAACGAAGCAATGAAGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101434.5 ENSMUST00000119488.2 |
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| 3UTR CAA 90 bp | TTGAGAGTTTTCTCATCTTCTACTGTTTCCTCTGAAAGCCCGGGATaGAAACGGTCAAGGGACACACACCTCAGCTCGCCTTCTGGGAGA | + |
|
Preference number: 2 (lower is better) Translates to: LRVFSSSTVSSESPG*KRSRDTHLSSPSGR Trigger: TCTCCCAGAAGGCGAGCTGAGGTGTGTGTCCCTTGACCGTTTCAATCCCGGGCTTTCAGAGGAAACAGTAGAAGATGAGAAAACTCTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101434.5 ENSMUST00000119488.2 |
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| 3UTR-3UTR TCA 90 bp | GGGTCCCCCAACTCTCCCATGGCTGTTTTTAACTCTGTCTTGGGTAGGGAGGCTAAGACTCTTCATGACTaGAGCAAGGCTTACAAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: GSPNSPMAVFNSVLGREAKTLHD*SKAYKK Trigger: CTTCTTGTAAGCCTTGCTTCAGTCATGAAGAGTCTT...AGCCTCCCTACCCAAGACAGAGTTAAAAACAGCCATGGGAGAGTTGGGGGACCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000067145.12 ENSMUST00000101434.5 ENSMUST00000119488.2 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
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| 3UTR-3UTR GCA 90 bp | TGCTTCATTGCTTCGTTTGCTGTCTGTGTTCTGTCGGCAGGAAAGCTTCAGACTGCCTCCATTAAAAACTaGAACTCGGGCGGAAGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: CFIASFAVCVLSAGKLQTASIKN*NSGGRR Trigger: CCTCCTTCCGCCCGAGTTGCAGTTTTTAATGGAGGC...AGTCTGAAGCTTTCCTGCCGACAGAACACAGACAGCAAACGAAGCAATGAAGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000067145.12 ENSMUST00000101434.5 ENSMUST00000119488.2 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
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| 3UTR-3UTR GCA 90 bp | CACACCTCAGCTCGCCTTCTGGGAGAACTTTATAATAGGGGTAAGCATATGGCAGCCTCCATTAAAAACTaGAACTCGGGCGGAAGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: HTSARLLGELYNRGKHMAASIKN*NSGGRR Trigger: CCTCCTTCCGCCCGAGTTGCAGTTTTTAATGGAGGC...TGCCATATGCTTACCCCTATTATAAAGTTCTCCCAGAAGGCGAGCTGAGGTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000101434.5 ENSMUST00000119488.2 |
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| 3UTR-3UTR GCA 90 bp | CATTGCTTCGTTTGCTGTCTGTGTTCTGTCGGCAGGAAAGCTTCAGACTCTTCTCTCTCCCAGCCTTCATaGTCTGTGCCCTTTGATGCA | + |
|
Preference number: 2 (lower is better) Translates to: HCFVCCLCSVGRKASDSSLSQPS*SVPFDA Trigger: TGCATCAAAGGGCACAGAGCATGAAGGCTGGGAGAG...AGAAGAGTCTGAAGCTTTCCTGCCGACAGAACACAGACAGCAAACGAAGCAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101434.5 ENSMUST00000119488.2 |
||
| 3UTR-3UTR CCA 90 bp | ATGCTTCATTGCTTCGTTTGCTGTCTGTGTTCTGTCGGCAGGAAAGCTTCAGACGCACAACTGATGGGCTaGGGTTCCTCTTCTGACTTC | + |
|
Preference number: 2 (lower is better) Translates to: MLHCFVCCLCSVGRKASDAQLMG*GSSSDF Trigger: GAAGTCAGAAGAGGAACCCCAGCCCATCAGTTGTGC...GTCTGAAGCTTTCCTGCCGACAGAACACAGACAGCAAACGAAGCAATGAAGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101434.5 ENSMUST00000119488.2 |
||
| 3UTR-3UTR CCA 90 bp | GAAAATGCTTCATTGCTTCGTTTGCTGTCTGTGTTCTGTCGGCAGGAAAGCTTCCATGATGCAGGAGGCTaGCCTTGCTCTGACCATGCT | + |
|
Preference number: 2 (lower is better) Translates to: ENASLLRLLSVFCRQESFHDAGG*PCSDHA Trigger: AGCATGGTCAGAGCAAGGCCAGCCTCCTGCATCATG...GAAGCTTTCCTGCCGACAGAACACAGACAGCAAACGAAGCAATGAAGCATTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101434.5 ENSMUST00000119488.2 |
||
| 3UTR-3UTR TCA 90 bp | GGGTCCCCCAACTCTCCCATGGCTGTTTTTAACTCTGTCTTGGGTAGGGAGGCTAGGACACAATATAAATaGCATATACAGTCAGGGTCC | + |
|
Preference number: 2 (lower is better) Translates to: GSPNSPMAVFNSVLGREARTQYK*HIQSGS Trigger: GGACCCTGACTGTATATGTCATTTATATTGTGTCCT...AGCCTCCCTACCCAAGACAGAGTTAAAAACAGCCATGGGAGAGTTGGGGGACCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000067145.12 ENSMUST00000101434.5 ENSMUST00000119488.2 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| 3UTR-3UTR TCA 90 bp | GGTGAGTGGAAGTCATATCCACACATGAGAAGGCTAGGCATGGGCATGCTGTGGAAGGATGCCAAGACATaGCAGATATGTTCAGAAGAC | + |
|
Preference number: 2 (lower is better) Translates to: GEWKSYPHMRRLGMGMLWKDAKT*QICSED Trigger: GTCTTCTGAACATATCTGTCATGTCTTGGCATCCTT...CCACAGCATGCCCATGCCTAGCCTTCTCATGTGTGGATATGACTTCCACTCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118121.2 |
||
| 3UTR-3UTR GCA 90 bp | TCATTGCTTCGTTTGCTGTCTGTGTTCTGTCGGCAGGAAAGCTTCAGACTCTTCGCCGAGTCAGTACAGTaGAGAAATGGCAAGCAAGAC | + |
|
Preference number: 2 (lower is better) Translates to: SLLRLLSVFCRQESFRLFAESVQ*RNGKQD Trigger: GTCTTGCTTGCCATTTCTGCACTGTACTGACTCGGC...GAAGAGTCTGAAGCTTTCCTGCCGACAGAACACAGACAGCAAACGAAGCAATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000067145.12 ENSMUST00000101434.5 ENSMUST00000119488.2 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| 3UTR-3UTR GCA 90 bp | GTGCCTCCATTAAAAACTGCAACTCGGGCGGAAGGAGGGGGACACGTGAGAAGGCGGTATAAAGGAAAATaGTTCATTGCTTCGTTTGCT | + |
|
Preference number: 2 (lower is better) Translates to: VPPLKTATRAEGGGHVRRRYKGK*FIASFA Trigger: AGCAAACGAAGCAATGAAGCATTTTCCTTTATACCG...CCTTCTCACGTGTCCCCCTCCTTCCGCCCGAGTTGCAGTTTTTAATGGAGGCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 6 transcripts: ENSMUST00000067145.12 ENSMUST00000101434.5 ENSMUST00000119488.2 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| 3UTR-3UTR GCA 90 bp | CTTATAAATACCATGAGCCTTCACCACTCTTGCAGGGAAGAAAGCTGTGCTCCACAGTTCACAACTGCCTaGAACTCCAGCTCCAGAGGA | + |
|
Preference number: 2 (lower is better) Translates to: LINTMSLHHSCREESCAPQFTTA*NSSSRG Trigger: TCCTCTGGAGCTGGAGTTGCAGGCAGTTGTGAACTG...TGGAGCACAGCTTTCTTCCCTGCAAGAGTGGTGAAGGCTCATGGTATTTATAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118121.2 |
||
| 3UTR-3UTR GCA 90 bp | ACTGAACGGCTGCAGCATACGCCAGACTTAATGCAAAAGAAACTGCAAGACAACAGCCTTCATGCTCTGTaGCCTTTGATGCAGGGAGTC | + |
|
Preference number: 2 (lower is better) Translates to: TERLQHTPDLMQKKLQDNSLHAL*PLMQGV Trigger: GACTCCCTGCATCAAAGGGCACAGAGCATGAAGGCT...GTTGTCTTGCAGTTTCTTTTGCATTAAGTCTGGCGTATGCTGCAGCCGTTCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101434.5 ENSMUST00000119488.2 |
||
| 3UTR-3UTR GCA 90 bp | GAAAATGCTTCATTGCTTCGTTTGCTGTCTGTGTTCTGTCGGCAGGAAAGCTTCAGCCTTCATGCTCTGTaGCCTTTGATGCAGGGAGTC | + |
|
Preference number: 2 (lower is better) Translates to: ENASLLRLLSVFCRQESFSLHAL*PLMQGV Trigger: GACTCCCTGCATCAAAGGGCACAGAGCATGAAGGCT...GAAGCTTTCCTGCCGACAGAACACAGACAGCAAACGAAGCAATGAAGCATTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101434.5 ENSMUST00000119488.2 |
||
| 3UTR-3UTR GCA 90 bp | CATTGCTTCGTTTGCTGTCTGTGTTCTGTCGGCAGGAAAGCTTCAGACTCTTCTCTTTCCATGGCTATCTaGTACAGGCTGGTCTGTCCA | + |
|
Preference number: 2 (lower is better) Translates to: HCFVCCLCSVGRKASDSSLSMAI*YRLVCP Trigger: TGGACAGACCAGCCTGTAGCAGATAGCCATGGAAAG...AGAAGAGTCTGAAGCTTTCCTGCCGACAGAACACAGACAGCAAACGAAGCAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101434.5 ENSMUST00000119488.2 |
||
| 3UTR-3UTR CCA 90 bp | AAAATGCTTCATTGCTTCGTTTGCTGTCTGTGTTCTGTCGGCAGGAAAGCTTCACCACCGAGGTGCGTCTaGTTCACAGGAAACAACAGG | + |
|
Preference number: 2 (lower is better) Translates to: KMLHCFVCCLCSVGRKASPPRCV*FTGNNR Trigger: CCTGTTGTTTCCTGTGAACCAGACGCACCTCGGTGG...TGAAGCTTTCCTGCCGACAGAACACAGACAGCAAACGAAGCAATGAAGCATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000067145.12 ENSMUST00000101434.5 ENSMUST00000119488.2 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| 3UTR-3UTR CCA 90 bp | AAAATGCTTCATTGCTTCGTTTGCTGTCTGTGTTCTGTCGGCAGGAAAGCTTCAGTGAGAAGGGACCTCTaGCCGAGTCAGTACAGTGCA | + |
|
Preference number: 2 (lower is better) Translates to: KMLHCFVCCLCSVGRKASVRRDL*PSQYSA Trigger: TGCACTGTACTGACTCGGCCAGAGGTCCCTTCTCAC...TGAAGCTTTCCTGCCGACAGAACACAGACAGCAAACGAAGCAATGAAGCATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000067145.12 ENSMUST00000101434.5 ENSMUST00000119488.2 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| 3UTR-3UTR CCA 90 bp | ATCTGCGGACCATCTGAAGAACTTGAGAGTTTTCTCATCTTCTACTGTTTCCTCGGTTGTCTGTGGCTCTaGGCTCTCTTCCTGGCCAGT | + |
|
Preference number: 2 (lower is better) Translates to: ICGPSEELESFLIFYCFLGCLWL*ALFLAS Trigger: ACTGGCCAGGAAGAGAGCCCAGAGCCACAGACAACC...GAGGAAACAGTAGAAGATGAGAAAACTCTCAAGTTCTTCAGATGGTCCGCAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101434.5 ENSMUST00000119488.2 |
||
| 3UTR-3UTR TCA 90 bp | ATCTGCGGACCATCTGAAGAACTTGAGAGTTTTCTCATCTTCTACTGTTTCCTCGGAAACAACAGGAACTaGACGGCTGCAGCATACGCC | + |
|
Preference number: 2 (lower is better) Translates to: ICGPSEELESFLIFYCFLGNNRN*TAAAYA Trigger: GGCGTATGCTGCAGCCGTTCAGTTCCTGTTGTTTCC...GAGGAAACAGTAGAAGATGAGAAAACTCTCAAGTTCTTCAGATGGTCCGCAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101434.5 ENSMUST00000119488.2 |
||
| 3UTR-3UTR TCA 90 bp | TGCTTCATTGCTTCGTTTGCTGTCTGTGTTCTGTCGGCAGGAAAGCTTCAGACTCAGTGGATCTCAATGTaGACCTGGACTCAAGCAGTT | + |
|
Preference number: 2 (lower is better) Translates to: CFIASFAVCVLSAGKLQTQWISM*TWTQAV Trigger: AACTGCTTGAGTCCAGGTTCACATTGAGATCCACTG...AGTCTGAAGCTTTCCTGCCGACAGAACACAGACAGCAAACGAAGCAATGAAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101434.5 |
||
| 3UTR-3UTR GCA 90 bp | AGTCAGGGTCCCCCAACTCTCCCATGGCTGTTTTTAACTCTGTCTTGGGTAGGGAGGAAAATGCTTCATTaGTTCGTTTGCTGTCTGTGT | + |
|
Preference number: 2 (lower is better) Translates to: SQGPPTLPWLFLTLSWVGRKMLH*FVCCLC Trigger: ACACAGACAGCAAACGAAGCAATGAAGCATTTTCCT...CCCTACCCAAGACAGAGTTAAAAACAGCCATGGGAGAGTTGGGGGACCCTGACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 6 transcripts: ENSMUST00000067145.12 ENSMUST00000101434.5 ENSMUST00000119488.2 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| 3UTR-3UTR CCA 90 bp | ATAAAGGAAAATGCTTCATTGCTTCGTTTGCTGTCTGTGTTCTGTCGGCAGGAACATGATGCAGGAGGCTaGCCTTGCTCTGACCATGCT | + |
|
Preference number: 2 (lower is better) Translates to: IKENASLLRLLSVFCRQEHDAGG*PCSDHA Trigger: AGCATGGTCAGAGCAAGGCCAGCCTCCTGCATCATG...TTCCTGCCGACAGAACACAGACAGCAAACGAAGCAATGAAGCATTTTCCTTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101434.5 ENSMUST00000119488.2 |
||
| 3UTR-3UTR GCA 90 bp | GCCAGTGACCCCACGACTATCTGCGGACCATCTGAAGAACTTGAGAGTTTTCTCAGGAAAATGCTTCATTaGTTCGTTTGCTGTCTGTGT | + |
|
Preference number: 2 (lower is better) Translates to: ASDPTTICGPSEELESFLRKMLH*FVCCLC Trigger: ACACAGACAGCAAACGAAGCAATGAAGCATTTTCCT...GAGAAAACTCTCAAGTTCTTCAGATGGTCCGCAGATAGTCGTGGGGTCACTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000101434.5 ENSMUST00000119488.2 |
||
| 3UTR-3UTR GCA 90 bp | AAAATGCTTCATTGCTTCGTTTGCTGTCTGTGTTCTGTCGGCAGGAAAGCTTCACTTTCCATGGCTATCTaGTACAGGCTGGTCTGTCCA | + |
|
Preference number: 2 (lower is better) Translates to: KMLHCFVCCLCSVGRKASLSMAI*YRLVCP Trigger: TGGACAGACCAGCCTGTAGCAGATAGCCATGGAAAG...TGAAGCTTTCCTGCCGACAGAACACAGACAGCAAACGAAGCAATGAAGCATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101434.5 ENSMUST00000119488.2 |
||
| 3UTR-3UTR TCA 90 bp | CATTGCTTCGTTTGCTGTCTGTGTTCTGTCGGCAGGAAAGCTTCAGACTCTTCTAAGACTCTTCATGACTaGAGCAAGGCTTACAAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: HCFVCCLCSVGRKASDSSKTLHD*SKAYKK Trigger: CTTCTTGTAAGCCTTGCTTCAGTCATGAAGAGTCTT...AGAAGAGTCTGAAGCTTTCCTGCCGACAGAACACAGACAGCAAACGAAGCAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000067145.12 ENSMUST00000101434.5 ENSMUST00000119488.2 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| 3UTR-3UTR TCA 90 bp | TTGAGAGTTTTCTCATCTTCTACTGTTTCCTCTGAAAGCCCGGGATTGAAACGGCTGGGGTTCCTCTTCTaGCTTCTTTTCTTAAGGCCA | + |
|
Preference number: 2 (lower is better) Translates to: LRVFSSSTVSSESPGLKRLGFLF*LLFLRP Trigger: TGGCCTTAAGAAAAGAAGTCAGAAGAGGAACCCCAG...CCGTTTCAATCCCGGGCTTTCAGAGGAAACAGTAGAAGATGAGAAAACTCTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000101434.5 ENSMUST00000119488.2 |
||
| 3UTR-3UTR GCA 90 bp | ATAAAGGAAAATGCTTCATTGCTTCGTTTGCTGTCTGTGTTCTGTCGGCAGGAAGCCGAGTCAGTACAGTaGAGAAATGGCAAGCAAGAC | + |
|
Preference number: 2 (lower is better) Translates to: IKENASLLRLLSVFCRQEAESVQ*RNGKQD Trigger: GTCTTGCTTGCCATTTCTGCACTGTACTGACTCGGC...TTCCTGCCGACAGAACACAGACAGCAAACGAAGCAATGAAGCATTTTCCTTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000067145.12 ENSMUST00000101434.5 ENSMUST00000119488.2 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| 3UTR-3UTR TCA 90 bp | CATATACAGTCAGGGTCCCCCAACTCTCCCATGGCTGTTTTTAACTCTGTCTTGAGGACACAATATAAATaGCATATACAGTCAGGGTCC | + |
|
Preference number: 2 (lower is better) Translates to: HIQSGSPNSPMAVFNSVLRTQYK*HIQSGS Trigger: GGACCCTGACTGTATATGTCATTTATATTGTGTCCT...CAAGACAGAGTTAAAAACAGCCATGGGAGAGTTGGGGGACCCTGACTGTATATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000067145.12 ENSMUST00000101434.5 ENSMUST00000119488.2 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| 3UTR-3UTR CCA 90 bp | ATAAAGGAAAATGCTTCATTGCTTCGTTTGCTGTCTGTGTTCTGTCGGCAGGAACCTCAGCTCGCCTTCTaGGAGAACTTTATAATAGGG | + |
|
Preference number: 2 (lower is better) Translates to: IKENASLLRLLSVFCRQEPQLAF*ENFIIG Trigger: CCCTATTATAAAGTTCTCCCAGAAGGCGAGCTGAGG...TTCCTGCCGACAGAACACAGACAGCAAACGAAGCAATGAAGCATTTTCCTTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101434.5 ENSMUST00000119488.2 |
||
| 3UTR-3UTR GCA 90 bp | GTCAGTACAGTGCAGAAATGGCAAGCAAGACTCTTCATGACTGAAGCAAGGCTTAGGAAAATGCTTCATTaGTTCGTTTGCTGTCTGTGT | + |
|
Preference number: 2 (lower is better) Translates to: VSTVQKWQARLFMTEARLRKMLH*FVCCLC Trigger: ACACAGACAGCAAACGAAGCAATGAAGCATTTTCCT...AAGCCTTGCTTCAGTCATGAAGAGTCTTGCTTGCCATTTCTGCACTGTACTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000067145.12 ENSMUST00000101434.5 ENSMUST00000119488.2 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| 3UTR-3UTR TCA 90 bp | ATCTGCGGACCATCTGAAGAACTTGAGAGTTTTCTCATCTTCTACTGTTTCCTCAAGACTCTTCATGACTaGAGCAAGGCTTACAAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: ICGPSEELESFLIFYCFLKTLHD*SKAYKK Trigger: CTTCTTGTAAGCCTTGCTTCAGTCATGAAGAGTCTT...GAGGAAACAGTAGAAGATGAGAAAACTCTCAAGTTCTTCAGATGGTCCGCAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101434.5 ENSMUST00000119488.2 |
||
| 3UTR-3UTR TCA 90 bp | ATAAAGGAAAATGCTTCATTGCTTCGTTTGCTGTCTGTGTTCTGTCGGCAGGAAAAGACTCTTCATGACTaGAGCAAGGCTTACAAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: IKENASLLRLLSVFCRQEKTLHD*SKAYKK Trigger: CTTCTTGTAAGCCTTGCTTCAGTCATGAAGAGTCTT...TTCCTGCCGACAGAACACAGACAGCAAACGAAGCAATGAAGCATTTTCCTTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000067145.12 ENSMUST00000101434.5 ENSMUST00000119488.2 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| 3UTR-3UTR GCA 90 bp | CTTCGTTTGCTGTCTGTGTTCTGTCGGCAGGAAAGCTTCAGACTCTTCTGTAATCGGTATAAAGGAAAATaGTTCATTGCTTCGTTTGCT | + |
|
Preference number: 2 (lower is better) Translates to: LRLLSVFCRQESFRLFCNRYKGK*FIASFA Trigger: AGCAAACGAAGCAATGAAGCATTTTCCTTTATACCG...ATTACAGAAGAGTCTGAAGCTTTCCTGCCGACAGAACACAGACAGCAAACGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000067145.12 ENSMUST00000101434.5 ENSMUST00000119488.2 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| 3UTR-3UTR GCA 90 bp | ATCTGCGGACCATCTGAAGAACTTGAGAGTTTTCTCATCTTCTACTGTTTCCTCCGGTATAAAGGAAAATaGTTCATTGCTTCGTTTGCT | + |
|
Preference number: 2 (lower is better) Translates to: ICGPSEELESFLIFYCFLRYKGK*FIASFA Trigger: AGCAAACGAAGCAATGAAGCATTTTCCTTTATACCG...GAGGAAACAGTAGAAGATGAGAAAACTCTCAAGTTCTTCAGATGGTCCGCAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000101434.5 ENSMUST00000119488.2 |
||
| 3UTR CCA 72 bp | GGAAGGCGTAGCCTACAGGCCTCCACTTCCATCAGATaGCCAGAGGTGAGCGGAGGCAGGCGGCATCCGGAC | + |
|
Preference number: 3 (lower is better) Translates to: GRRSLQASTSIR*PEVSGGRRHPD Trigger: GTCCGGATGCCGCCTGCCTCCGCTCACCTCTGGCCATCTGATGGAAGTGGAGGCCTGTAGGCTACGCCTTCC 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000067145.12 ENSMUST00000101434.5 ENSMUST00000119488.2 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| 3UTR-3UTR CAA 90 bp | CGTAGCCTACAGGCCTCCACTTCCATCAGATGGCCAGAGGTGAGCGGAGGCAGGCATGCTCTGTGCCCTTaGATGCAGGGAGTCGGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: RSLQASTSIRWPEVSGGRHALCP*MQGVGV Trigger: CACCCCGACTCCCTGCATCAAAGGGCACAGAGCATG...CCTGCCTCCGCTCACCTCTGGCCATCTGATGGAAGTGGAGGCCTGTAGGCTACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101434.5 ENSMUST00000119488.2 |
||
| 3UTR GCA 72 bp | GACACCCAGGGTCCCTCTCCCAGCCTTCATGCTCTGTaGCCTTTGATGCAGGGAGTCGGGGTGAGGCCTATC | + |
|
Preference number: 3 (lower is better) Translates to: DTQGPSPSLHAL*PLMQGVGVRPI Trigger: GATAGGCCTCACCCCGACTCCCTGCATCAAAGGGCACAGAGCATGAAGGCTGGGAGAGGGACCCTGGGTGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101434.5 ENSMUST00000119488.2 |
||
| 3UTR GCA 72 bp | AGTGCATCCCCGATGCCATGGGACATCCCGGCTAGTTaGTCTTCTGAAGGAGCAGGGGACAGAGCCACAGCC | + |
|
Preference number: 3 (lower is better) Translates to: SASPMPWDIPAS*SSEGAGDRATA Trigger: GGCTGTGGCTCTGTCCCCTGCTCCTTCAGAAGAGCAACTAGCCGGGATGTCCCATGGCATCGGGGATGCACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000101434.5 ENSMUST00000119488.2 |
||
| 3UTR CCA 72 bp | CGGGCGGAAGGAGGGGGACACGTGAGAAGGGACCTCTaGCCGAGTCAGTACAGTGCAGAAATGGCAAGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: RAEGGGHVRRDL*PSQYSAEMASK Trigger: CTTGCTTGCCATTTCTGCACTGTACTGACTCGGCCAGAGGTCCCTTCTCACGTGTCCCCCTCCTTCCGCCCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000067145.12 ENSMUST00000101434.5 ENSMUST00000119488.2 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| 3UTR CCA 72 bp | ACTCCAGCTCCAGAGGATCCAGTGACCAGAATCTTCTaGCTGCCGCCTCCGCCTCTTCCTCCTCCTCCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: TPAPEDPVTRIF*LPPPPLPPPPP Trigger: AGGAGGAGGAGGAGGAAGAGGCGGAGGCGGCAGCCAGAAGATTCTGGTCACTGGATCCTCTGGAGCTGGAGT 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101434.5 ENSMUST00000118121.2 |
||
| 3UTR CCA 72 bp | TCTGAGGCTGCTGCCCCCGTGGCCCGTGACTTTCCATaGCTATCTGCTACAGGCTGGTCTGTCCAAGAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: SEAAAPVARDFP*LSATGWSVQEG Trigger: GCCTTCTTGGACAGACCAGCCTGTAGCAGATAGCCATGGAAAGTCACGGGCCACGGGGGCAGCAGCCTCAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101434.5 ENSMUST00000119488.2 |
||
| 3UTR TCA 72 bp | CACAACTGCCTGCAACTCCAGCTCCAGAGGATCCAGTaGCCAGAATCTTCTGGCTGCCGCCTCCGCCTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: HNCLQLQLQRIQ*PESSGCRLRLF Trigger: GAAGAGGCGGAGGCGGCAGCCAGAAGATTCTGGTCACTGGATCCTCTGGAGCTGGAGTTGCAGGCAGTTGTG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101434.5 ENSMUST00000118121.2 |
||
| 3UTR-3UTR CAA 90 bp | CCAGGACTCTCCTTTGAGGTACTGTCCACGGTTGTCTGTGGCTCTGGGCTCTCTCATGCTCTGTGCCCTTaGATGCAGGGAGTCGGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: PGLSFEVLSTVVCGSGLSHALCP*MQGVGV Trigger: CACCCCGACTCCCTGCATCAAAGGGCACAGAGCATG...AGAGAGCCCAGAGCCACAGACAACCGTGGACAGTACCTCAAAGGAGAGTCCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101434.5 ENSMUST00000119488.2 |
||
| 3UTR TCA 72 bp | TCCCACTTCCCTCAGTTTTGGATGGCCTGGCCGTCCTaGCACCCAGGACTCTCCTTTGAGGTACTGTCCACG | + |
|
Preference number: 3 (lower is better) Translates to: SHFPQFWMAWPS*HPGLSFEVLST Trigger: CGTGGACAGTACCTCAAAGGAGAGTCCTGGGTGTCAGGACGGCCAGGCCATCCAAAACTGAGGGAAGTGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101434.5 ENSMUST00000119488.2 |
||
| 3UTR CCA 72 bp | GTGGCCCGTGACTTTCCATGGCTATCTGCTACAGGCTaGTCTGTCCAAGAAGGCACAACTGATGGGCTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: VARDFPWLSATG*SVQEGTTDGLG Trigger: CCCCAGCCCATCAGTTGTGCCTTCTTGGACAGACCAGCCTGTAGCAGATAGCCATGGAAAGTCACGGGCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101434.5 ENSMUST00000119488.2 |
||
| 3UTR-3UTR CAA 90 bp | ATATACAGTCAGGGTCCCCCAACTCTCCCATGGCTGTTTTTAACTCTGTCTTGGGACAGAGCCACAGCCTaGCCGAGGGAGGCTGCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: IYSQGPPTLPWLFLTLSWDRATA*PREAAG Trigger: CCCAGCAGCCTCCCTCGGCAAGGCTGTGGCTCTGTC...CCAAGACAGAGTTAAAAACAGCCATGGGAGAGTTGGGGGACCCTGACTGTATAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000101434.5 ENSMUST00000119488.2 |
||
| 3UTR CCA 72 bp | TCTGACCATGCTTCATTTCTGAGGCTGCTGCCCCCGTaGCCCGTGACTTTCCATGGCTATCTGCTACAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: SDHASFLRLLPP*PVTFHGYLLQA Trigger: AGCCTGTAGCAGATAGCCATGGAAAGTCACGGGCCACGGGGGCAGCAGCCTCAGAAATGAAGCATGGTCAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101434.5 ENSMUST00000119488.2 |
||
| 3UTR CCA 72 bp | ATCGGTGAGACAGTTCTGACCAGGTGCCTAGCCCCTTaGGGCCAGCACTTGGTGGTTCACCTCTTAGGAATC | + |
|
Preference number: 3 (lower is better) Translates to: IGETVLTRCLAP*GQHLVVHLLGI Trigger: GATTCCTAAGAGGTGAACCACCAAGTGCTGGCCCCAAGGGGCTAGGCACCTGGTCAGAACTGTCTCACCGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101434.5 ENSMUST00000119488.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGCGTAGCCTACAGGCCTCCACTTCCATCAGATGGCCAGAGGTGAGCGGAGGCGGAGGGAGGGTCACTTaGGAAGAAAATCTTAATGTA | + |
|
Preference number: 3 (lower is better) Translates to: RRSLQASTSIRWPEVSGGGGRVT*EENLNV Trigger: TACATTAAGATTTTCTTCCAAAGTGACCCTCCCTCC...GCCTCCGCTCACCTCTGGCCATCTGATGGAAGTGGAGGCCTGTAGGCTACGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000067145.12 ENSMUST00000101434.5 ENSMUST00000119488.2 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| 3UTR TCA 72 bp | CCTACTCAGTCATCTTGGTGCAAGCTGGGCGAGGGGTaGGTGGAAGTCATATCCACACATGAGAAGGCTAGG | + |
|
Preference number: 3 (lower is better) Translates to: PTQSSWCKLGEG*VEVISTHEKAR Trigger: CCTAGCCTTCTCATGTGTGGATATGACTTCCACTCACCCCTCGCCCAGCTTGCACCAAGATGACTGAGTAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118121.2 |
||
| 3UTR GCA 72 bp | GGGAGCCAGAGAGATGGCTCAGCTGTTAAGGGTGCTTaGTGTTCTTGCAGAGACCTGGACTCAAGCAGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: GSQRDGSAVKGA*CSCRDLDSSSS Trigger: TGAACTGCTTGAGTCCAGGTCTCTGCAAGAACAGCAAGCACCCTTAACAGCTGAGCCATCTCTCTGGCTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118121.2 |
||
| 3UTR CCA 72 bp | CTCAGTCATCTTGGTGCAAGCTGGGCGAGGGGTGAGTaGAAGTCATATCCACACATGAGAAGGCTAGGCATG | + |
|
Preference number: 3 (lower is better) Translates to: LSHLGASWARGE*KSYPHMRRLGM Trigger: CATGCCTAGCCTTCTCATGTGTGGATATGACTTCCACTCACCCCTCGCCCAGCTTGCACCAAGATGACTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118121.2 |
||
| 3UTR GCA 72 bp | TTGCAGAGACCTGGACTCAAGCAGTTCACAACTGCCTaGAACTCCAGCTCCAGAGGATCCAGTGACCAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: LQRPGLKQFTTA*NSSSRGSSDQN Trigger: ATTCTGGTCACTGGATCCTCTGGAGCTGGAGTTGCAGGCAGTTGTGAACTGCTTGAGTCCAGGTCTCTGCAA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118121.2 |
||
| 3UTR CCA 72 bp | CAGCTGTTAAGGGTGCTTGCTGTTCTTGCAGAGACCTaGACTCAAGCAGTTCACAACTGCCTGCAACTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: QLLRVLAVLAET*TQAVHNCLQLQ Trigger: CTGGAGTTGCAGGCAGTTGTGAACTGCTTGAGTCCAGGTCTCTGCAAGAACAGCAAGCACCCTTAACAGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118121.2 |
||
| 3UTR-3UTR CAA 90 bp | CGTAGCCTACAGGCCTCCACTTCCATCAGATGGCCAGAGGTGAGCGGAGGCAGGATCCTCAATTTAATATaGCAACTTCTCCAAAGTGCC | + |
|
Preference number: 3 (lower is better) Translates to: RSLQASTSIRWPEVSGGRILNLI*QLLQSA Trigger: GGCACTTTGGAGAAGTTGCAATATTAAATTGAGGAT...CCTGCCTCCGCTCACCTCTGGCCATCTGATGGAAGTGGAGGCCTGTAGGCTACG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000067145.12 ENSMUST00000101434.5 ENSMUST00000119488.2 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTCGTTTGCTGTCTGTGTTCTGTCGGCAGGAAAGCTTCAGACTCTTCTGTAATCCTCCTTGTGACTGTTaGGCCAGGCAGACACCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: LRLLSVFCRQESFRLFCNPPCDC*ARQTPR Trigger: CCTGGGTGTCTGCCTGGCCAAACAGTCACAAGGAGG...ATTACAGAAGAGTCTGAAGCTTTCCTGCCGACAGAACACAGACAGCAAACGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101434.5 ENSMUST00000119488.2 |
||
| 3UTR-3UTR CAA 90 bp | ATATACAGTCAGGGTCCCCCAACTCTCCCATGGCTGTTTTTAACTCTGTCTTGGCCTTGGGGCCAGCACTaGGTGGTTCACCTCTTAGGA | + |
|
Preference number: 3 (lower is better) Translates to: IYSQGPPTLPWLFLTLSWPWGQH*VVHLLG Trigger: TCCTAAGAGGTGAACCACCAAGTGCTGGCCCCAAGG...CCAAGACAGAGTTAAAAACAGCCATGGGAGAGTTGGGGGACCCTGACTGTATAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000101434.5 ENSMUST00000119488.2 |
||
| 3UTR TCA 72 bp | CCGAGGTGCGTCTGGTTCACAGGAAACAACAGGAACTaGACGGCTGCAGCATACGCCAGACTTAATGCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: PRCVWFTGNNRN*TAAAYARLNAK Trigger: TTTTGCATTAAGTCTGGCGTATGCTGCAGCCGTTCAGTTCCTGTTGTTTCCTGTGAACCAGACGCACCTCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000067145.12 ENSMUST00000101434.5 ENSMUST00000119488.2 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| 3UTR GCA 72 bp | CAATGTGAACCTGGACTCAAGCAGTTCACAACTGCCTaGAACTCCAGCTCCAGAGGATCCAGTGACCAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: QCEPGLKQFTTA*NSSSRGSSDQN Trigger: ATTCTGGTCACTGGATCCTCTGGAGCTGGAGTTGCAGGCAGTTGTGAACTGCTTGAGTCCAGGTTCACATTG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101434.5 |
||
| 3UTR CCA 72 bp | GAAGGGACCTCTGGCCGAGTCAGTACAGTGCAGAAATaGCAAGCAAGACTCTTCATGACTGAAGCAAGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: EGTSGRVSTVQK*QARLFMTEARL Trigger: AAGCCTTGCTTCAGTCATGAAGAGTCTTGCTTGCCATTTCTGCACTGTACTGACTCGGCCAGAGGTCCCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000067145.12 ENSMUST00000101434.5 ENSMUST00000119488.2 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCCAAAGTGCCTCCATTAAAAACTGCAACTCGGGCGGAAGGAGGGGGACACGTAAGGAAAATGCTTCATaGCTTCGTTTGCTGTCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: LQSASIKNCNSGGRRGTRKENAS*LRLLSV Trigger: CACAGACAGCAAACGAAGCAATGAAGCATTTTCCTT...ACGTGTCCCCCTCCTTCCGCCCGAGTTGCAGTTTTTAATGGAGGCACTTTGGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 6 transcripts: ENSMUST00000067145.12 ENSMUST00000101434.5 ENSMUST00000119488.2 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| 3UTR-3UTR CAA 90 bp | GGGTCCCCCAACTCTCCCATGGCTGTTTTTAACTCTGTCTTGGGTAGGGAGGCTGGAGGGAGGGTCACTTaGGAAGAAAATCTTAATGTA | + |
|
Preference number: 3 (lower is better) Translates to: GSPNSPMAVFNSVLGREAGGRVT*EENLNV Trigger: TACATTAAGATTTTCTTCCAAAGTGACCCTCCCTCC...AGCCTCCCTACCCAAGACAGAGTTAAAAACAGCCATGGGAGAGTTGGGGGACCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 6 transcripts: ENSMUST00000067145.12 ENSMUST00000101434.5 ENSMUST00000119488.2 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGTCAGGGTCCCCCAACTCTCCCATGGCTGTTTTTAACTCTGTCTTGGGTAGGGGAGGGAGGGTCACTTaGGAAGAAAATCTTAATGTA | + |
|
Preference number: 3 (lower is better) Translates to: QSGSPNSPMAVFNSVLGRGGRVT*EENLNV Trigger: TACATTAAGATTTTCTTCCAAAGTGACCCTCCCTCC...CCTACCCAAGACAGAGTTAAAAACAGCCATGGGAGAGTTGGGGGACCCTGACTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 6 transcripts: ENSMUST00000067145.12 ENSMUST00000101434.5 ENSMUST00000119488.2 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| 3UTR TCA 72 bp | GGGCATGCTGTGGTCCTGTTTAAGGATGCCAAGACATaGCAGATATGTTCAGAAGACTTCTCTAGGGAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: GHAVVLFKDAKT*QICSEDFSREP Trigger: TGGCTCCCTAGAGAAGTCTTCTGAACATATCTGTCATGTCTTGGCATCCTTAAACAGGACCACAGCATGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118121.2 |
||
| 3UTR-3UTR CAA 90 bp | GCCAGTGACCCCACGACTATCTGCGGACCATCTGAAGAACTTGAGAGTTTTCTCAAGGAAAATGCTTCATaGCTTCGTTTGCTGTCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: ASDPTTICGPSEELESFLKENAS*LRLLSV Trigger: CACAGACAGCAAACGAAGCAATGAAGCATTTTCCTT...GAGAAAACTCTCAAGTTCTTCAGATGGTCCGCAGATAGTCGTGGGGTCACTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000101434.5 ENSMUST00000119488.2 |
||
| 3UTR-3UTR CAA 90 bp | GGCCGAGTCAGTACAGTGCAGAAATGGCAAGCAAGACTCTTCATGACTGAAGCAAAGGAAAATGCTTCATaGCTTCGTTTGCTGTCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: GRVSTVQKWQARLFMTEAKENAS*LRLLSV Trigger: CACAGACAGCAAACGAAGCAATGAAGCATTTTCCTT...TGCTTCAGTCATGAAGAGTCTTGCTTGCCATTTCTGCACTGTACTGACTCGGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000067145.12 ENSMUST00000101434.5 ENSMUST00000119488.2 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| 3UTR TCA 72 bp | GGAAGACACTCGCCATACCTAGGCGCAGGAAGAGAGTaGATGAATGTAAATTTTGTAAAGAGGAGGAGTCCC | + |
|
Preference number: 3 (lower is better) Translates to: GRHSPYLGAGRE*MNVNFVKRRSP Trigger: GGGACTCCTCCTCTTTACAAAATTTACATTCATTCACTCTCTTCCTGCGCCTAGGTATGGCGAGTGTCTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118121.2 |
||
| 3UTR TCA 72 bp | TCAGTACAGTGCAGAAATGGCAAGCAAGACTCTTCATaGCTGAAGCAAGGCTTACAAGAAGTGGAAGGCGTA | + |
|
Preference number: 3 (lower is better) Translates to: SVQCRNGKQDSS*LKQGLQEVEGV Trigger: TACGCCTTCCACTTCTTGTAAGCCTTGCTTCAGTCATGAAGAGTCTTGCTTGCCATTTCTGCACTGTACTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000067145.12 ENSMUST00000101434.5 ENSMUST00000119488.2 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| 3UTR TCA 72 bp | GAACTTGAGAGTTTTCTCATCTTCTACTGTTTCCTCTaGAAGCCCGGGATTGAAACGGTCAAGGGACACACA | + |
|
Preference number: 3 (lower is better) Translates to: ELESFLIFYCFL*KPGIETVKGHT Trigger: TGTGTGTCCCTTGACCGTTTCAATCCCGGGCTTTCAGAGGAAACAGTAGAAGATGAGAAAACTCTCAAGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101434.5 ENSMUST00000119488.2 |
||
| 3UTR-3UTR CAA 90 bp | GGCCGAGTCAGTACAGTGCAGAAATGGCAAGCAAGACTCTTCATGACTGAAGCAATCCTCAATTTAATATaGCAACTTCTCCAAAGTGCC | + |
|
Preference number: 3 (lower is better) Translates to: GRVSTVQKWQARLFMTEAILNLI*QLLQSA Trigger: GGCACTTTGGAGAAGTTGCAATATTAAATTGAGGAT...TGCTTCAGTCATGAAGAGTCTTGCTTGCCATTTCTGCACTGTACTGACTCGGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000067145.12 ENSMUST00000101434.5 ENSMUST00000119488.2 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| 3UTR-3UTR CAA 90 bp | GTCAGTACAGTGCAGAAATGGCAAGCAAGACTCTTCATGACTGAAGCAAGGCTTGGAGGGAGGGTCACTTaGGAAGAAAATCTTAATGTA | + |
|
Preference number: 3 (lower is better) Translates to: VSTVQKWQARLFMTEARLGGRVT*EENLNV Trigger: TACATTAAGATTTTCTTCCAAAGTGACCCTCCCTCC...AAGCCTTGCTTCAGTCATGAAGAGTCTTGCTTGCCATTTCTGCACTGTACTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000067145.12 ENSMUST00000101434.5 ENSMUST00000119488.2 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| 3UTR GCA 72 bp | AAGAAATCACAAGTCCTGGGCCGGTATAAAGGAAAATaGTTCATTGCTTCGTTTGCTGTCTGTGTTCTGTCG | + |
|
Preference number: 3 (lower is better) Translates to: KKSQVLGRYKGK*FIASFAVCVLS Trigger: CGACAGAACACAGACAGCAAACGAAGCAATGAAGCATTTTCCTTTATACCGGCCCAGGACTTGTGATTTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000067145.12 ENSMUST00000101434.5 ENSMUST00000119488.2 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| 3UTR GCA 72 bp | CATGAGCCTTCACCACTCTTGCAGGGAAGAAAGCTGTaGTCCATTACAAAAGTTCCCTCCAAAAGAACTAAA | + |
|
Preference number: 3 (lower is better) Translates to: HEPSPLLQGRKL*SITKVPSKRTK Trigger: TTTAGTTCTTTTGGAGGGAACTTTTGTAATGGAGCACAGCTTTCTTCCCTGCAAGAGTGGTGAAGGCTCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118121.2 |
||
| 3UTR-3UTR CAA 90 bp | ATATACAGTCAGGGTCCCCCAACTCTCCCATGGCTGTTTTTAACTCTGTCTTGGATCCTCAATTTAATATaGCAACTTCTCCAAAGTGCC | + |
|
Preference number: 3 (lower is better) Translates to: IYSQGPPTLPWLFLTLSWILNLI*QLLQSA Trigger: GGCACTTTGGAGAAGTTGCAATATTAAATTGAGGAT...CCAAGACAGAGTTAAAAACAGCCATGGGAGAGTTGGGGGACCCTGACTGTATAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000067145.12 ENSMUST00000101434.5 ENSMUST00000119488.2 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| 3UTR-3UTR CAA 90 bp | TGCTTCATTGCTTCGTTTGCTGTCTGTGTTCTGTCGGCAGGAAAGCTTCAGACTATCCTCAATTTAATATaGCAACTTCTCCAAAGTGCC | + |
|
Preference number: 3 (lower is better) Translates to: CFIASFAVCVLSAGKLQTILNLI*QLLQSA Trigger: GGCACTTTGGAGAAGTTGCAATATTAAATTGAGGAT...AGTCTGAAGCTTTCCTGCCGACAGAACACAGACAGCAAACGAAGCAATGAAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000067145.12 ENSMUST00000101434.5 ENSMUST00000119488.2 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| 3UTR-3UTR CAA 90 bp | ACTGAACGGCTGCAGCATACGCCAGACTTAATGCAAAAGAAACTGCAAGACAACATCCTCAATTTAATATaGCAACTTCTCCAAAGTGCC | + |
|
Preference number: 3 (lower is better) Translates to: TERLQHTPDLMQKKLQDNILNLI*QLLQSA Trigger: GGCACTTTGGAGAAGTTGCAATATTAAATTGAGGAT...GTTGTCTTGCAGTTTCTTTTGCATTAAGTCTGGCGTATGCTGCAGCCGTTCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000067145.12 ENSMUST00000101434.5 ENSMUST00000119488.2 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| CDS-3UTR GCA 90 bp | CGTAGCCTACAGGCCTCCACTTCCATCAGATGGCCAGAGGTGAGCGGAGGCAGGACAGAGCCACAGCCTTaGCGAGGGAGGCTGCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: RSLQASTSIRWPEVSGGRTEPQP*RGRLLG Trigger: CCCCAGCAGCCTCCCTCGGCAAGGCTGTGGCTCTGT...CCTGCCTCCGCTCACCTCTGGCCATCTGATGGAAGTGGAGGCCTGTAGGCTACG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067145.12 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| CDS-3UTR GCA 90 bp | TGCAACTCGGGCGGAAGGAGGGGGACACGTGAGAAGGGACCTCTGGCCGAGTCAACAGTTCTGACCAGGTaGCTAGCCCCTTGGGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CNSGGRRGTREKGPLAESTVLTR*LAPWGQ Trigger: CTGGCCCCAAGGGGCTAGGCACCTGGTCAGAACTGT...TGACTCGGCCAGAGGTCCCTTCTCACGTGTCCCCCTCCTTCCGCCCGAGTTGCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000067145.12 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| 3UTR CAA 72 bp | GGATGGCCTGGCCGTCCTGACACCCAGGACTCTCCTTaGAGGTACTGTCCACGGTTGTCTGTGGCTCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GWPGRPDTQDSP*RYCPRLSVALG Trigger: GCCCAGAGCCACAGACAACCGTGGACAGTACCTCAAAGGAGAGTCCTGGGTGTCAGGACGGCCAGGCCATCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101434.5 ENSMUST00000119488.2 |
||
| 3UTR CAA 72 bp | CAGGGTCCCTCTCCCAGCCTTCATGCTCTGTGCCCTTaGATGCAGGGAGTCGGGGTGAGGCCTATCAGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: QGPSPSLHALCP*MQGVGVRPISQ Trigger: TTGACTGATAGGCCTCACCCCGACTCCCTGCATCAAAGGGCACAGAGCATGAAGGCTGGGAGAGGGACCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101434.5 ENSMUST00000119488.2 |
||
| CDS-3UTR CCA 90 bp | AGGCGTAGCCTACAGGCCTCCACTTCCATCAGATGGCCAGAGGTGAGCGGAGGCGCACAACTGATGGGCTaGGGTTCCTCTTCTGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: RRSLQASTSIRWPEVSGGAQLMG*GSSSDF Trigger: GAAGTCAGAAGAGGAACCCCAGCCCATCAGTTGTGC...GCCTCCGCTCACCTCTGGCCATCTGATGGAAGTGGAGGCCTGTAGGCTACGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067145.12 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| CDS-3UTR GCA 90 bp | CTACAGGCCTCCACTTCCATCAGATGGCCAGAGGTGAGCGGAGGCAGGCGGCATCTTTCCATGGCTATCTaGTACAGGCTGGTCTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LQASTSIRWPEVSGGRRHLSMAI*YRLVCP Trigger: TGGACAGACCAGCCTGTAGCAGATAGCCATGGAAAG...ATGCCGCCTGCCTCCGCTCACCTCTGGCCATCTGATGGAAGTGGAGGCCTGTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067145.12 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| CDS-3UTR TCA 90 bp | GGGTCCCCCAACTCTCCCATGGCTGTTTTTAACTCTGTCTTGGGTAGGGAGGCTAGATTGCAGAGCCAGTaGCCCCACGACTATCTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: GSPNSPMAVFNSVLGREARLQSQ*PHDYLR Trigger: CCGCAGATAGTCGTGGGGTCACTGGCTCTGCAATCT...AGCCTCCCTACCCAAGACAGAGTTAAAAACAGCCATGGGAGAGTTGGGGGACCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000067145.12 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| CDS-3UTR GCA 90 bp | AGTCAGGGTCCCCCAACTCTCCCATGGCTGTTTTTAACTCTGTCTTGGGTAGGGACAGTTCTGACCAGGTaGCTAGCCCCTTGGGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SQGPPTLPWLFLTLSWVGTVLTR*LAPWGQ Trigger: CTGGCCCCAAGGGGCTAGGCACCTGGTCAGAACTGT...CCCTACCCAAGACAGAGTTAAAAACAGCCATGGGAGAGTTGGGGGACCCTGACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000067145.12 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| CDS-3UTR CCA 90 bp | GTGCCTCCATTAAAAACTGCAACTCGGGCGGAAGGAGGGGGACACGTGAGAAGGGCCCGTGACTTTCCATaGCTATCTGCTACAGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VPPLKTATRAEGGGHVRRARDFP*LSATGW Trigger: CCAGCCTGTAGCAGATAGCCATGGAAAGTCACGGGC...CCTTCTCACGTGTCCCCCTCCTTCCGCCCGAGTTGCAGTTTTTAATGGAGGCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000067145.12 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| CDS-3UTR CCA 90 bp | GGGTCCCCCAACTCTCCCATGGCTGTTTTTAACTCTGTCTTGGGTAGGGAGGCTTCCCTCAGTTTTGGATaGCCTGGCCGTCCTGACACC | + |
|
Preference number: 4 (lower is better) Translates to: GSPNSPMAVFNSVLGREASLSFG*PGRPDT Trigger: GGTGTCAGGACGGCCAGGCCATCCAAAACTGAGGGA...AGCCTCCCTACCCAAGACAGAGTTAAAAACAGCCATGGGAGAGTTGGGGGACCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000067145.12 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| CDS-3UTR TCA 90 bp | GGTGAGTGGAAGTCATATCCACACATGAGAAGGCTAGGCATGGGCATGCTGTGGCCAAGTCAAAGAAGATaGGCAGCGTGCGGGTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GEWKSYPHMRRLGMGMLWPSQRR*AACGSA Trigger: GGCTGACCCGCACGCTGCTCATCTTCTTTGACTTGG...CCACAGCATGCCCATGCCTAGCCTTCTCATGTGTGGATATGACTTCCACTCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118121.2 |
||
| CDS-3UTR CCA 90 bp | CAGTCAGGGTCCCCCAACTCTCCCATGGCTGTTTTTAACTCTGTCTTGGGTAGGGTCCACGGTTGTCTGTaGCTCTGGGCTCTCTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: QSGSPNSPMAVFNSVLGRVHGCL*LWALFL Trigger: CAGGAAGAGAGCCCAGAGCCACAGACAACCGTGGAC...CCTACCCAAGACAGAGTTAAAAACAGCCATGGGAGAGTTGGGGGACCCTGACTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000067145.12 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| 3UTR CAA 72 bp | AGAGGAGGAGTCCCTGACAAAGCCTACTCAGTCATCTaGGTGCAAGCTGGGCGAGGGGTGAGTGGAAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RGGVPDKAYSVI*VQAGRGVSGSH Trigger: ATGACTTCCACTCACCCCTCGCCCAGCTTGCACCAAGATGACTGAGTAGGCTTTGTCAGGGACTCCTCCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118121.2 |
||
| CDS-3UTR GCA 90 bp | CTTCGTTTGCTGTCTGTGTTCTGTCGGCAGGAAAGCTTCAGACTCTTCTGTAATACAGAGCCACAGCCTTaGCGAGGGAGGCTGCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LRLLSVFCRQESFRLFCNTEPQP*RGRLLG Trigger: CCCCAGCAGCCTCCCTCGGCAAGGCTGTGGCTCTGT...ATTACAGAAGAGTCTGAAGCTTTCCTGCCGACAGAACACAGACAGCAAACGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067145.12 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| CDS-3UTR GCA 90 bp | ACTGAACGGCTGCAGCATACGCCAGACTTAATGCAAAAGAAACTGCAAGACAACACAGAGCCACAGCCTTaGCGAGGGAGGCTGCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: TERLQHTPDLMQKKLQDNTEPQP*RGRLLG Trigger: CCCCAGCAGCCTCCCTCGGCAAGGCTGTGGCTCTGT...GTTGTCTTGCAGTTTCTTTTGCATTAAGTCTGGCGTATGCTGCAGCCGTTCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067145.12 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| CDS-3UTR CCA 90 bp | GGGTCCCCCAACTCTCCCATGGCTGTTTTTAACTCTGTCTTGGGTAGGGAGGCTGCACAACTGATGGGCTaGGGTTCCTCTTCTGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: GSPNSPMAVFNSVLGREAAQLMG*GSSSDF Trigger: GAAGTCAGAAGAGGAACCCCAGCCCATCAGTTGTGC...AGCCTCCCTACCCAAGACAGAGTTAAAAACAGCCATGGGAGAGTTGGGGGACCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000067145.12 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| CDS-3UTR CCA 90 bp | AGTCAGGGTCCCCCAACTCTCCCATGGCTGTTTTTAACTCTGTCTTGGGTAGGGCATGATGCAGGAGGCTaGCCTTGCTCTGACCATGCT | + |
|
Preference number: 4 (lower is better) Translates to: SQGPPTLPWLFLTLSWVGHDAGG*PCSDHA Trigger: AGCATGGTCAGAGCAAGGCCAGCCTCCTGCATCATG...CCCTACCCAAGACAGAGTTAAAAACAGCCATGGGAGAGTTGGGGGACCCTGACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000067145.12 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| CDS-3UTR TCA 90 bp | TTTGAAGCCACCATGATGCAGGAGGCTGGCCTTGCTCTGACCATGCTTCATTTCCAGTGGATCTCAATGTaGACCTGCAGGCGCACGTTG | + |
|
Preference number: 4 (lower is better) Translates to: FEATMMQEAGLALTMLHFQWISM*TCRRTL Trigger: CAACGTGCGCCTGCAGGTTCACATTGAGATCCACTG...GAAATGAAGCATGGTCAGAGCAAGGCCAGCCTCCTGCATCATGGTGGCTTCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119488.2 |
||
| CDS-3UTR CCA 90 bp | TACAGTCAGGGTCCCCCAACTCTCCCATGGCTGTTTTTAACTCTGTCTTGGGTAGTCCACGGTTGTCTGTaGCTCTGGGCTCTCTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: YSQGPPTLPWLFLTLSWVVHGCL*LWALFL Trigger: CAGGAAGAGAGCCCAGAGCCACAGACAACCGTGGAC...TACCCAAGACAGAGTTAAAAACAGCCATGGGAGAGTTGGGGGACCCTGACTGTA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000067145.12 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| CDS-3UTR TCA 90 bp | CTCCAAAGTGCCTCCATTAAAAACTGCAACTCGGGCGGAAGGAGGGGGACACGTCTGGGGTTCCTCTTCTaGCTTCTTTTCTTAAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LQSASIKNCNSGGRRGTRLGFLF*LLFLRP Trigger: TGGCCTTAAGAAAAGAAGTCAGAAGAGGAACCCCAG...ACGTGTCCCCCTCCTTCCGCCCGAGTTGCAGTTTTTAATGGAGGCACTTTGGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000067145.12 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| CDS-3UTR TCA 90 bp | GGGTCCCCCAACTCTCCCATGGCTGTTTTTAACTCTGTCTTGGGTAGGGAGGCTCTGGGGTTCCTCTTCTaGCTTCTTTTCTTAAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GSPNSPMAVFNSVLGREALGFLF*LLFLRP Trigger: TGGCCTTAAGAAAAGAAGTCAGAAGAGGAACCCCAG...AGCCTCCCTACCCAAGACAGAGTTAAAAACAGCCATGGGAGAGTTGGGGGACCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000067145.12 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| CDS-3UTR TCA 90 bp | TCATTGCTTCGTTTGCTGTCTGTGTTCTGTCGGCAGGAAAGCTTCAGACTCTTCAGATTGCAGAGCCAGTaGCCCCACGACTATCTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: SLLRLLSVFCRQESFRLFRLQSQ*PHDYLR Trigger: CCGCAGATAGTCGTGGGGTCACTGGCTCTGCAATCT...GAAGAGTCTGAAGCTTTCCTGCCGACAGAACACAGACAGCAAACGAAGCAATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067145.12 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| CDS-3UTR TCA 90 bp | ATATACAGTCAGGGTCCCCCAACTCTCCCATGGCTGTTTTTAACTCTGTCTTGGAGATTGCAGAGCCAGTaGCCCCACGACTATCTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: IYSQGPPTLPWLFLTLSWRLQSQ*PHDYLR Trigger: CCGCAGATAGTCGTGGGGTCACTGGCTCTGCAATCT...CCAAGACAGAGTTAAAAACAGCCATGGGAGAGTTGGGGGACCCTGACTGTATAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000067145.12 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| CDS-3UTR TCA 90 bp | ATGCTTCATTGCTTCGTTTGCTGTCTGTGTTCTGTCGGCAGGAAAGCTTCAGACAGATTGCAGAGCCAGTaGCCCCACGACTATCTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: MLHCFVCCLCSVGRKASDRLQSQ*PHDYLR Trigger: CCGCAGATAGTCGTGGGGTCACTGGCTCTGCAATCT...GTCTGAAGCTTTCCTGCCGACAGAACACAGACAGCAAACGAAGCAATGAAGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067145.12 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| CDS-3UTR TCA 90 bp | TCATTGCTTCGTTTGCTGTCTGTGTTCTGTCGGCAGGAAAGCTTCAGACTCTTCCCAAGTCAAAGAAGATaGGCAGCGTGCGGGTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SLLRLLSVFCRQESFRLFPSQRR*AACGSA Trigger: GGCTGACCCGCACGCTGCTCATCTTCTTTGACTTGG...GAAGAGTCTGAAGCTTTCCTGCCGACAGAACACAGACAGCAAACGAAGCAATGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101434.5 ENSMUST00000119488.2 |
||
| CDS-3UTR GCA 90 bp | GAAAATGCTTCATTGCTTCGTTTGCTGTCTGTGTTCTGTCGGCAGGAAAGCTTCACAGTTCTGACCAGGTaGCTAGCCCCTTGGGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ENASLLRLLSVFCRQESFTVLTR*LAPWGQ Trigger: CTGGCCCCAAGGGGCTAGGCACCTGGTCAGAACTGT...GAAGCTTTCCTGCCGACAGAACACAGACAGCAAACGAAGCAATGAAGCATTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000067145.12 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| CDS-3UTR GCA 90 bp | CACACCTCAGCTCGCCTTCTGGGAGAACTTTATAATAGGGGTAAGCATATGGCATCTTCCACCACCACCTaGAGGCGCACGTTGAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: HTSARLLGELYNRGKHMASSTTT*RRTLSI Trigger: GATGCTCAACGTGCGCCTGCAGGTGGTGGTGGAAGA...TGCCATATGCTTACCCCTATTATAAAGTTCTCCCAGAAGGCGAGCTGAGGTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101434.5 |
||
| CDS-3UTR CCA 90 bp | TGCTTCATTGCTTCGTTTGCTGTCTGTGTTCTGTCGGCAGGAAAGCTTCAGACTTCCCTCAGTTTTGGATaGCCTGGCCGTCCTGACACC | + |
|
Preference number: 4 (lower is better) Translates to: CFIASFAVCVLSAGKLQTSLSFG*PGRPDT Trigger: GGTGTCAGGACGGCCAGGCCATCCAAAACTGAGGGA...AGTCTGAAGCTTTCCTGCCGACAGAACACAGACAGCAAACGAAGCAATGAAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067145.12 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| CDS-3UTR CCA 90 bp | CATATACAGTCAGGGTCCCCCAACTCTCCCATGGCTGTTTTTAACTCTGTCTTGTCCCTCAGTTTTGGATaGCCTGGCCGTCCTGACACC | + |
|
Preference number: 4 (lower is better) Translates to: HIQSGSPNSPMAVFNSVLSLSFG*PGRPDT Trigger: GGTGTCAGGACGGCCAGGCCATCCAAAACTGAGGGA...CAAGACAGAGTTAAAAACAGCCATGGGAGAGTTGGGGGACCCTGACTGTATATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000067145.12 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| CDS-3UTR CCA 90 bp | AGTGCCTCCATTAAAAACTGCAACTCGGGCGGAAGGAGGGGGACACGTGAGAAGCCTCAGCTCGCCTTCTaGGAGAACTTTATAATAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SASIKNCNSGGRRGTREKPQLAF*ENFIIG Trigger: CCCTATTATAAAGTTCTCCCAGAAGGCGAGCTGAGG...CTTCTCACGTGTCCCCCTCCTTCCGCCCGAGTTGCAGTTTTTAATGGAGGCACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000067145.12 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| CDS-3UTR TCA 90 bp | GAAAATGCTTCATTGCTTCGTTTGCTGTCTGTGTTCTGTCGGCAGGAAAGCTTCCCAAGTCAAAGAAGATaGGCAGCGTGCGGGTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: ENASLLRLLSVFCRQESFPSQRR*AACGSA Trigger: GGCTGACCCGCACGCTGCTCATCTTCTTTGACTTGG...GAAGCTTTCCTGCCGACAGAACACAGACAGCAAACGAAGCAATGAAGCATTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101434.5 ENSMUST00000119488.2 |
||
| CDS-3UTR GCA 90 bp | TTAGGACACAATATAAATGACATATACAGTCAGGGTCCCCCAACTCTCCCATGGACAGTTCTGACCAGGTaGCTAGCCCCTTGGGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LGHNINDIYSQGPPTLPWTVLTR*LAPWGQ Trigger: CTGGCCCCAAGGGGCTAGGCACCTGGTCAGAACTGT...CCATGGGAGAGTTGGGGGACCCTGACTGTATATGTCATTTATATTGTGTCCTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000067145.12 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| CDS-3UTR CCA 90 bp | TCATTGCTTCGTTTGCTGTCTGTGTTCTGTCGGCAGGAAAGCTTCAGACTCTTCCATGATGCAGGAGGCTaGCCTTGCTCTGACCATGCT | + |
|
Preference number: 4 (lower is better) Translates to: SLLRLLSVFCRQESFRLFHDAGG*PCSDHA Trigger: AGCATGGTCAGAGCAAGGCCAGCCTCCTGCATCATG...GAAGAGTCTGAAGCTTTCCTGCCGACAGAACACAGACAGCAAACGAAGCAATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067145.12 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| CDS-3UTR CCA 90 bp | GGAAAATGCTTCATTGCTTCGTTTGCTGTCTGTGTTCTGTCGGCAGGAAAGCTTGGTTGTCTGTGGCTCTaGGCTCTCTTCCTGGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: GKCFIASFAVCVLSAGKLGCLWL*ALFLAS Trigger: ACTGGCCAGGAAGAGAGCCCAGAGCCACAGACAACC...AAGCTTTCCTGCCGACAGAACACAGACAGCAAACGAAGCAATGAAGCATTTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067145.12 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| CDS-3UTR CCA 90 bp | ACTGAACGGCTGCAGCATACGCCAGACTTAATGCAAAAGAAACTGCAAGACAACGGTTGTCTGTGGCTCTaGGCTCTCTTCCTGGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: TERLQHTPDLMQKKLQDNGCLWL*ALFLAS Trigger: ACTGGCCAGGAAGAGAGCCCAGAGCCACAGACAACC...GTTGTCTTGCAGTTTCTTTTGCATTAAGTCTGGCGTATGCTGCAGCCGTTCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067145.12 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| CDS-3UTR CCA 90 bp | ACTGAACGGCTGCAGCATACGCCAGACTTAATGCAAAAGAAACTGCAAGACAACGTCCACGGTTGTCTGTaGCTCTGGGCTCTCTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: TERLQHTPDLMQKKLQDNVHGCL*LWALFL Trigger: CAGGAAGAGAGCCCAGAGCCACAGACAACCGTGGAC...GTTGTCTTGCAGTTTCTTTTGCATTAAGTCTGGCGTATGCTGCAGCCGTTCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067145.12 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| CDS-3UTR CCA 90 bp | CTTCGTTTGCTGTCTGTGTTCTGTCGGCAGGAAAGCTTCAGACTCTTCTGTAATTCCCTCAGTTTTGGATaGCCTGGCCGTCCTGACACC | + |
|
Preference number: 4 (lower is better) Translates to: LRLLSVFCRQESFRLFCNSLSFG*PGRPDT Trigger: GGTGTCAGGACGGCCAGGCCATCCAAAACTGAGGGA...ATTACAGAAGAGTCTGAAGCTTTCCTGCCGACAGAACACAGACAGCAAACGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067145.12 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| CDS-3UTR CCA 90 bp | GGGTCCCCCAACTCTCCCATGGCTGTTTTTAACTCTGTCTTGGGTAGGGAGGCTAGAGACTTGCTAATCTaGAAGATTGCAGAGCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: GSPNSPMAVFNSVLGREARDLLI*KIAEPV Trigger: CACTGGCTCTGCAATCTTCCAGATTAGCAAGTCTCT...AGCCTCCCTACCCAAGACAGAGTTAAAAACAGCCATGGGAGAGTTGGGGGACCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000067145.12 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| CDS-3UTR TCA 90 bp | ATAAAGGAAAATGCTTCATTGCTTCGTTTGCTGTCTGTGTTCTGTCGGCAGGAAATGGCCTGGCCGTCCTaGCACCCAGGACTCTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: IKENASLLRLLSVFCRQEMAWPS*HPGLSF Trigger: AAAGGAGAGTCCTGGGTGTCAGGACGGCCAGGCCAT...TTCCTGCCGACAGAACACAGACAGCAAACGAAGCAATGAAGCATTTTCCTTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067145.12 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| CDS-3UTR CCA 90 bp | GTCAGTACAGTGCAGAAATGGCAAGCAAGACTCTTCATGACTGAAGCAAGGCTTGCCCGTGACTTTCCATaGCTATCTGCTACAGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VSTVQKWQARLFMTEARLARDFP*LSATGW Trigger: CCAGCCTGTAGCAGATAGCCATGGAAAGTCACGGGC...AAGCCTTGCTTCAGTCATGAAGAGTCTTGCTTGCCATTTCTGCACTGTACTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067145.12 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| CDS-3UTR CCA 90 bp | GGAAAATGCTTCATTGCTTCGTTTGCTGTCTGTGTTCTGTCGGCAGGAAAGCTTCATGATGCAGGAGGCTaGCCTTGCTCTGACCATGCT | + |
|
Preference number: 4 (lower is better) Translates to: GKCFIASFAVCVLSAGKLHDAGG*PCSDHA Trigger: AGCATGGTCAGAGCAAGGCCAGCCTCCTGCATCATG...AAGCTTTCCTGCCGACAGAACACAGACAGCAAACGAAGCAATGAAGCATTTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067145.12 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| CDS-3UTR CCA 90 bp | TTAGGACACAATATAAATGACATATACAGTCAGGGTCCCCCAACTCTCCCATGGGGTTGTCTGTGGCTCTaGGCTCTCTTCCTGGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LGHNINDIYSQGPPTLPWGCLWL*ALFLAS Trigger: ACTGGCCAGGAAGAGAGCCCAGAGCCACAGACAACC...CCATGGGAGAGTTGGGGGACCCTGACTGTATATGTCATTTATATTGTGTCCTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000067145.12 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| CDS-3UTR GCA 90 bp | TCATTGCTTCGTTTGCTGTCTGTGTTCTGTCGGCAGGAAAGCTTCAGACTCTTCCTTTCCATGGCTATCTaGTACAGGCTGGTCTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SLLRLLSVFCRQESFRLFLSMAI*YRLVCP Trigger: TGGACAGACCAGCCTGTAGCAGATAGCCATGGAAAG...GAAGAGTCTGAAGCTTTCCTGCCGACAGAACACAGACAGCAAACGAAGCAATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067145.12 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| CDS-3UTR GCA 90 bp | CTTCGTTTGCTGTCTGTGTTCTGTCGGCAGGAAAGCTTCAGACTCTTCTGTAATGCAGGAGGCTGGCCTTaGTCTGACCATGCTTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: LRLLSVFCRQESFRLFCNAGGWP*SDHASF Trigger: AAATGAAGCATGGTCAGAGCAAGGCCAGCCTCCTGC...ATTACAGAAGAGTCTGAAGCTTTCCTGCCGACAGAACACAGACAGCAAACGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067145.12 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
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| CDS-3UTR GCA 90 bp | CCGTTTATTGCTTATAAATACCATGAGCCTTCACCACTCTTGCAGGGAAGAAAGTCTTCCACCACCACCTaGAGGCGCACGTTGAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: PFIAYKYHEPSPLLQGRKSSTTT*RRTLSI Trigger: GATGCTCAACGTGCGCCTGCAGGTGGTGGTGGAAGA...CTTTCTTCCCTGCAAGAGTGGTGAAGGCTCATGGTATTTATAAGCAATAAACGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118121.2 |
||
| CDS-3UTR CCA 90 bp | ACTGAACGGCTGCAGCATACGCCAGACTTAATGCAAAAGAAACTGCAAGACAACGCACAACTGATGGGCTaGGGTTCCTCTTCTGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: TERLQHTPDLMQKKLQDNAQLMG*GSSSDF Trigger: GAAGTCAGAAGAGGAACCCCAGCCCATCAGTTGTGC...GTTGTCTTGCAGTTTCTTTTGCATTAAGTCTGGCGTATGCTGCAGCCGTTCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067145.12 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| 3UTR CAA 72 bp | CACAAGTCCTGGGCCGGTATAAAGGAAAATGCTTCATaGCTTCGTTTGCTGTCTGTGTTCTGTCGGCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: HKSWAGIKENAS*LRLLSVFCRQE Trigger: TTCCTGCCGACAGAACACAGACAGCAAACGAAGCAATGAAGCATTTTCCTTTATACCGGCCCAGGACTTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000067145.12 ENSMUST00000101434.5 ENSMUST00000119488.2 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| CDS-3UTR TCA 90 bp | ATATACAGTCAGGGTCCCCCAACTCTCCCATGGCTGTTTTTAACTCTGTCTTGGCTGGGGTTCCTCTTCTaGCTTCTTTTCTTAAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: IYSQGPPTLPWLFLTLSWLGFLF*LLFLRP Trigger: TGGCCTTAAGAAAAGAAGTCAGAAGAGGAACCCCAG...CCAAGACAGAGTTAAAAACAGCCATGGGAGAGTTGGGGGACCCTGACTGTATAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000067145.12 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| CDS-3UTR CCA 90 bp | GGCCGAGTCAGTACAGTGCAGAAATGGCAAGCAAGACTCTTCATGACTGAAGCAAGAGACTTGCTAATCTaGAAGATTGCAGAGCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: GRVSTVQKWQARLFMTEARDLLI*KIAEPV Trigger: CACTGGCTCTGCAATCTTCCAGATTAGCAAGTCTCT...TGCTTCAGTCATGAAGAGTCTTGCTTGCCATTTCTGCACTGTACTGACTCGGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067145.12 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| CDS-3UTR CCA 90 bp | ACTGAACGGCTGCAGCATACGCCAGACTTAATGCAAAAGAAACTGCAAGACAACCCTCAGCTCGCCTTCTaGGAGAACTTTATAATAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TERLQHTPDLMQKKLQDNPQLAF*ENFIIG Trigger: CCCTATTATAAAGTTCTCCCAGAAGGCGAGCTGAGG...GTTGTCTTGCAGTTTCTTTTGCATTAAGTCTGGCGTATGCTGCAGCCGTTCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067145.12 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| CDS-3UTR CCA 90 bp | ATGCTTCATTGCTTCGTTTGCTGTCTGTGTTCTGTCGGCAGGAAAGCTTCAGACAGAGACTTGCTAATCTaGAAGATTGCAGAGCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: MLHCFVCCLCSVGRKASDRDLLI*KIAEPV Trigger: CACTGGCTCTGCAATCTTCCAGATTAGCAAGTCTCT...GTCTGAAGCTTTCCTGCCGACAGAACACAGACAGCAAACGAAGCAATGAAGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067145.12 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| 3UTR CAA 72 bp | TGGGCCGGTATAAAGGAAAATGCTTCATTGCTTCGTTaGCTGTCTGTGTTCTGTCGGCAGGAAAGCTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: WAGIKENASLLR*LSVFCRQESFR Trigger: TCTGAAGCTTTCCTGCCGACAGAACACAGACAGCAAACGAAGCAATGAAGCATTTTCCTTTATACCGGCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000067145.12 ENSMUST00000101434.5 ENSMUST00000119488.2 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| CDS-3UTR TCA 90 bp | TTAGGACACAATATAAATGACATATACAGTCAGGGTCCCCCAACTCTCCCATGGCTGGGGTTCCTCTTCTaGCTTCTTTTCTTAAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LGHNINDIYSQGPPTLPWLGFLF*LLFLRP Trigger: TGGCCTTAAGAAAAGAAGTCAGAAGAGGAACCCCAG...CCATGGGAGAGTTGGGGGACCCTGACTGTATATGTCATTTATATTGTGTCCTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000067145.12 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| CDS-3UTR GCA 90 bp | ATAAAGGAAAATGCTTCATTGCTTCGTTTGCTGTCTGTGTTCTGTCGGCAGGAACTTTCCATGGCTATCTaGTACAGGCTGGTCTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: IKENASLLRLLSVFCRQELSMAI*YRLVCP Trigger: TGGACAGACCAGCCTGTAGCAGATAGCCATGGAAAG...TTCCTGCCGACAGAACACAGACAGCAAACGAAGCAATGAAGCATTTTCCTTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067145.12 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| CDS-3UTR CCA 90 bp | AGTACAGTGCAGAAATGGCAAGCAAGACTCTTCATGACTGAAGCAAGGCTTACACCTCAGCTCGCCTTCTaGGAGAACTTTATAATAGGG | + |
|
Preference number: 4 (lower is better) Translates to: STVQKWQARLFMTEARLTPQLAF*ENFIIG Trigger: CCCTATTATAAAGTTCTCCCAGAAGGCGAGCTGAGG...TGTAAGCCTTGCTTCAGTCATGAAGAGTCTTGCTTGCCATTTCTGCACTGTACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067145.12 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| CDS-3UTR CCA 90 bp | AAAATGCTTCATTGCTTCGTTTGCTGTCTGTGTTCTGTCGGCAGGAAAGCTTCACCTCAGCTCGCCTTCTaGGAGAACTTTATAATAGGG | + |
|
Preference number: 4 (lower is better) Translates to: KMLHCFVCCLCSVGRKASPQLAF*ENFIIG Trigger: CCCTATTATAAAGTTCTCCCAGAAGGCGAGCTGAGG...TGAAGCTTTCCTGCCGACAGAACACAGACAGCAAACGAAGCAATGAAGCATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067145.12 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| CDS-3UTR CCA 90 bp | GAAAATGCTTCATTGCTTCGTTTGCTGTCTGTGTTCTGTCGGCAGGAAAGCTTCAGAGACTTGCTAATCTaGAAGATTGCAGAGCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: ENASLLRLLSVFCRQESFRDLLI*KIAEPV Trigger: CACTGGCTCTGCAATCTTCCAGATTAGCAAGTCTCT...GAAGCTTTCCTGCCGACAGAACACAGACAGCAAACGAAGCAATGAAGCATTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067145.12 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| 3UTR CAA 72 bp | GTGACCCCACGACTATCTGCGGACCATCTGAAGAACTaGAGAGTTTTCTCATCTTCTACTGTTTCCTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: VTPRLSADHLKN*RVFSSSTVSSE Trigger: TTCAGAGGAAACAGTAGAAGATGAGAAAACTCTCAAGTTCTTCAGATGGTCCGCAGATAGTCGTGGGGTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000101434.5 ENSMUST00000119488.2 |
||
| CDS-3UTR CAA 90 bp | CTACAGGCCTCCACTTCCATCAGATGGCCAGAGGTGAGCGGAGGCAGGCGGCATCCTCCTTGTGACTGTTaGGCCAGGCAGACACCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LQASTSIRWPEVSGGRRHPPCDC*ARQTPR Trigger: CCTGGGTGTCTGCCTGGCCAAACAGTCACAAGGAGG...ATGCCGCCTGCCTCCGCTCACCTCTGGCCATCTGATGGAAGTGGAGGCCTGTAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067145.12 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| CDS-3UTR CAA 90 bp | CTACAGGCCTCCACTTCCATCAGATGGCCAGAGGTGAGCGGAGGCAGGCGGCATCCTTGGGGCCAGCACTaGGTGGTTCACCTCTTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: LQASTSIRWPEVSGGRRHPWGQH*VVHLLG Trigger: TCCTAAGAGGTGAACCACCAAGTGCTGGCCCCAAGG...ATGCCGCCTGCCTCCGCTCACCTCTGGCCATCTGATGGAAGTGGAGGCCTGTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067145.12 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| CDS-3UTR CAA 90 bp | AGTGCCTCCATTAAAAACTGCAACTCGGGCGGAAGGAGGGGGACACGTGAGAAGCCTCCTTGTGACTGTTaGGCCAGGCAGACACCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SASIKNCNSGGRRGTREKPPCDC*ARQTPR Trigger: CCTGGGTGTCTGCCTGGCCAAACAGTCACAAGGAGG...CTTCTCACGTGTCCCCCTCCTTCCGCCCGAGTTGCAGTTTTTAATGGAGGCACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000067145.12 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| CDS-3UTR CAA 90 bp | CAGTCAGGGTCCCCCAACTCTCCCATGGCTGTTTTTAACTCTGTCTTGGGTAGGCCTTGGGGCCAGCACTaGGTGGTTCACCTCTTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: QSGSPNSPMAVFNSVLGRPWGQH*VVHLLG Trigger: TCCTAAGAGGTGAACCACCAAGTGCTGGCCCCAAGG...CCTACCCAAGACAGAGTTAAAAACAGCCATGGGAGAGTTGGGGGACCCTGACTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000067145.12 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
||
| CDS-3UTR CAA 90 bp | TTAGGACACAATATAAATGACATATACAGTCAGGGTCCCCCAACTCTCCCATGGGACAGAGCCACAGCCTaGCCGAGGGAGGCTGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: LGHNINDIYSQGPPTLPWDRATA*PREAAG Trigger: CCCAGCAGCCTCCCTCGGCAAGGCTGTGGCTCTGTC...CCATGGGAGAGTTGGGGGACCCTGACTGTATATGTCATTTATATTGTGTCCTAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000067145.12 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
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| CDS-3UTR CAA 90 bp | TCATTGCTTCGTTTGCTGTCTGTGTTCTGTCGGCAGGAAAGCTTCAGACTCTTCCCTCCTTGTGACTGTTaGGCCAGGCAGACACCCAGG | + |
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Preference number: 5 (lower is better) Translates to: SLLRLLSVFCRQESFRLFPPCDC*ARQTPR Trigger: CCTGGGTGTCTGCCTGGCCAAACAGTCACAAGGAGG...GAAGAGTCTGAAGCTTTCCTGCCGACAGAACACAGACAGCAAACGAAGCAATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067145.12 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
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| CDS-3UTR CAA 90 bp | GGCCGAGTCAGTACAGTGCAGAAATGGCAAGCAAGACTCTTCATGACTGAAGCACCTTGGGGCCAGCACTaGGTGGTTCACCTCTTAGGA | + |
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Preference number: 5 (lower is better) Translates to: GRVSTVQKWQARLFMTEAPWGQH*VVHLLG Trigger: TCCTAAGAGGTGAACCACCAAGTGCTGGCCCCAAGG...TGCTTCAGTCATGAAGAGTCTTGCTTGCCATTTCTGCACTGTACTGACTCGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067145.12 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
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| CDS-3UTR CAA 90 bp | CGTAGCCTACAGGCCTCCACTTCCATCAGATGGCCAGAGGTGAGCGGAGGCAGGGACCATCTGAAGAACTaGAGAGTTTTCTCATCTTCT | + |
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Preference number: 5 (lower is better) Translates to: RSLQASTSIRWPEVSGGRDHLKN*RVFSSS Trigger: AGAAGATGAGAAAACTCTCAAGTTCTTCAGATGGTC...CCTGCCTCCGCTCACCTCTGGCCATCTGATGGAAGTGGAGGCCTGTAGGCTACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067145.12 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
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| CDS-3UTR CAA 90 bp | ATAAAGGAAAATGCTTCATTGCTTCGTTTGCTGTCTGTGTTCTGTCGGCAGGAACCTCCTTGTGACTGTTaGGCCAGGCAGACACCCAGG | + |
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Preference number: 5 (lower is better) Translates to: IKENASLLRLLSVFCRQEPPCDC*ARQTPR Trigger: CCTGGGTGTCTGCCTGGCCAAACAGTCACAAGGAGG...TTCCTGCCGACAGAACACAGACAGCAAACGAAGCAATGAAGCATTTTCCTTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067145.12 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
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| CDS-3UTR CAA 90 bp | TTAGGACACAATATAAATGACATATACAGTCAGGGTCCCCCAACTCTCCCATGGCCTTGGGGCCAGCACTaGGTGGTTCACCTCTTAGGA | + |
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Preference number: 5 (lower is better) Translates to: LGHNINDIYSQGPPTLPWPWGQH*VVHLLG Trigger: TCCTAAGAGGTGAACCACCAAGTGCTGGCCCCAAGG...CCATGGGAGAGTTGGGGGACCCTGACTGTATATGTCATTTATATTGTGTCCTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000067145.12 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
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| CDS-3UTR CAA 90 bp | TGCTTCATTGCTTCGTTTGCTGTCTGTGTTCTGTCGGCAGGAAAGCTTCAGACTGACCATCTGAAGAACTaGAGAGTTTTCTCATCTTCT | + |
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Preference number: 5 (lower is better) Translates to: CFIASFAVCVLSAGKLQTDHLKN*RVFSSS Trigger: AGAAGATGAGAAAACTCTCAAGTTCTTCAGATGGTC...AGTCTGAAGCTTTCCTGCCGACAGAACACAGACAGCAAACGAAGCAATGAAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067145.12 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
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| CDS-3UTR CAA 90 bp | TTAGGACACAATATAAATGACATATACAGTCAGGGTCCCCCAACTCTCCCATGGGACCATCTGAAGAACTaGAGAGTTTTCTCATCTTCT | + |
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Preference number: 5 (lower is better) Translates to: LGHNINDIYSQGPPTLPWDHLKN*RVFSSS Trigger: AGAAGATGAGAAAACTCTCAAGTTCTTCAGATGGTC...CCATGGGAGAGTTGGGGGACCCTGACTGTATATGTCATTTATATTGTGTCCTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000067145.12 ENSMUST00000169329.8 ENSMUST00000196487.2 ENSMUST00000200267.2 |
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