Pregenerated sensors for FAM219A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028439Ensembl transcript IDs: ENSMUST00000108049.9, ENSMUST00000108050.2, ENSMUST00000108052.10
Found 222 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | ATGCTGGCATGTGGGGCGCCTGAAGGAGAGACACTCTGGCCGCACTaGCTCAGTGAGAGGAGGCTCGTGGGTCCGAGGCCCAGCAGCCTG | + |
Preference number: 1 (lower is better) Translates to: MLACGAPEGETLWPH*LSERRLVGPRPSSL Trigger: CAGGCTGCTGGGCCTCGGACCCACGAGCCTCCTCTCACTGAGCCAGTGCGGCCAGAGTGTCTCTCCTTCAGGCGCCCCACATGCCAGCAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR CCA 90 bp | AGGGTGGAAATGCTGGCATGTGGGGCGCCTGAAGGAGAGACACTCTaGCCGCACTGGCTCAGTGAGAGGAGGCTCGTGGGTCCGAGGCCC | + |
Preference number: 1 (lower is better) Translates to: RVEMLACGAPEGETL*PHWLSERRLVGPRP Trigger: GGGCCTCGGACCCACGAGCCTCCTCTCACTGAGCCAGTGCGGCCAGAGTGTCTCTCCTTCAGGCGCCCCACATGCCAGCATTTCCACCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR TCA 90 bp | ACTGGCTCAGTGAGAGGAGGCTCGTGGGTCCGAGGCCCAGCAGCCTaGGGCTCTCTCTGCTTGCACTTGTCTTCAGCCATGGGAGAGCCA | + |
Preference number: 1 (lower is better) Translates to: TGSVRGGSWVRGPAA*GSLCLHLSSAMGEP Trigger: TGGCTCTCCCATGGCTGAAGACAAGTGCAAGCAGAGAGAGCCTCAGGCTGCTGGGCCTCGGACCCACGAGCCTCCTCTCACTGAGCCAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR GCA 90 bp | GAGGCTCGTGGGTCCGAGGCCCAGCAGCCTGAGGCTCTCTCTGCTTaGACTTGTCTTCAGCCATGGGAGAGCCACCATCTCACTGAGCTA | + |
Preference number: 1 (lower is better) Translates to: EARGSEAQQPEALSA*TCLQPWESHHLTEL Trigger: TAGCTCAGTGAGATGGTGGCTCTCCCATGGCTGAAGACAAGTGCAAGCAGAGAGAGCCTCAGGCTGCTGGGCCTCGGACCCACGAGCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR GCA 90 bp | ATGCCGAGGCTGGGACCAGAACCCAGGTTCCAGATGGCCAGGCTGTaGTTTCAGTCCACTGCATTCTCATTCCCAAGCGGCCTCTCACTG | + |
Preference number: 1 (lower is better) Translates to: MPRLGPEPRFQMARL*FQSTAFSFPSGLSL Trigger: CAGTGAGAGGCCGCTTGGGAATGAGAATGCAGTGGACTGAAAGCACAGCCTGGCCATCTGGAACCTGGGTTCTGGTCCCAGCCTCGGCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR GCA 90 bp | GAAGCCCTAGAGAAGCCTGGGAATTGCTTAGGAGCTCAGGGAGAATaGCGAGGCTGGGACCAGAACCCAGGTTCCAGATGGCCAGGCTGT | + |
Preference number: 1 (lower is better) Translates to: EALEKPGNCLGAQGE*RGWDQNPGSRWPGC Trigger: ACAGCCTGGCCATCTGGAACCTGGGTTCTGGTCCCAGCCTCGGCATTCTCCCTGAGCTCCTAAGCAATTCCCAGGCTTCTCTAGGGCTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR CCA 90 bp | GCTCAGGGAGAATGCCGAGGCTGGGACCAGAACCCAGGTTCCAGATaGCCAGGCTGTGCTTTCAGTCCACTGCATTCTCATTCCCAAGCG | + |
Preference number: 1 (lower is better) Translates to: AQGECRGWDQNPGSR*PGCAFSPLHSHSQA Trigger: CGCTTGGGAATGAGAATGCAGTGGACTGAAAGCACAGCCTGGCCATCTGGAACCTGGGTTCTGGTCCCAGCCTCGGCATTCTCCCTGAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR CCA 90 bp | GCCCAGCAGCCTGAGGCTCTCTCTGCTTGCACTTGTCTTCAGCCATaGGAGAGCCACCATCTCACTGAGCTACAGCCTCAGCTTTCCTCC | + |
Preference number: 1 (lower is better) Translates to: AQQPEALSACTCLQP*ESHHLTELQPQLSS Trigger: GGAGGAAAGCTGAGGCTGTAGCTCAGTGAGATGGTGGCTCTCCCATGGCTGAAGACAAGTGCAAGCAGAGAGAGCCTCAGGCTGCTGGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR CCA 90 bp | GAGAAGCCTGGGAATTGCTTAGGAGCTCAGGGAGAATGCCGAGGCTaGGACCAGAACCCAGGTTCCAGATGGCCAGGCTGTGCTTTCAGT | + |
Preference number: 1 (lower is better) Translates to: EKPGNCLGAQGECRG*DQNPGSRWPGCAFS Trigger: ACTGAAAGCACAGCCTGGCCATCTGGAACCTGGGTTCTGGTCCCAGCCTCGGCATTCTCCCTGAGCTCCTAAGCAATTCCCAGGCTTCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR CCA 90 bp | CTAATGCCCTTGCCTGCTTCGGAACTAGTGCGCTCACAAGGGCACTaGCCCTTGGCTCTCAATCCCACAGGAAGTCAGAGGCAAAGGCAG | + |
Preference number: 1 (lower is better) Translates to: LMPLPASELVRSQGH*PLALNPTGSQRQRQ Trigger: CTGCCTTTGCCTCTGACTTCCTGTGGGATTGAGAGCCAAGGGCCAGTGCCCTTGTGAGCGCACTAGTTCCGAAGCAGGCAAGGGCATTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR TCA 90 bp | CTCTGCTTGCACTTGTCTTCAGCCATGGGAGAGCCACCATCTCACTaGGCTACAGCCTCAGCTTTCCTCCCTCAGACCAGACCAGCAGCA | + |
Preference number: 1 (lower is better) Translates to: LCLHLSSAMGEPPSH*ATASAFLPQTRPAA Trigger: TGCTGCTGGTCTGGTCTGAGGGAGGAAAGCTGAGGCTGTAGCTCAGTGAGATGGTGGCTCTCCCATGGCTGAAGACAAGTGCAAGCAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR TCA 90 bp | GACAGTATCCCTTTGGACAGCGCTGCCAGGCTTCCCATCTGGAGATaGGGGGAAAACACAAATAGGTATATGGGCTGGCACAGGGTTTGG | + |
Preference number: 1 (lower is better) Translates to: DSIPLDSAARLPIWR*GENTNRYMGWHRVW Trigger: CCAAACCCTGTGCCAGCCCATATACCTATTTGTGTTTTCCCCTCATCTCCAGATGGGAAGCCTGGCAGCGCTGTCCAAAGGGATACTGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR CCA 90 bp | GGGAGACAGTGGAAGGAGTTATCTAATGGAGAGACAGTATCCCTTTaGACAGCGCTGCCAGGCTTCCCATCTGGAGATGAGGGGAAAACA | + |
Preference number: 1 (lower is better) Translates to: GRQWKELSNGETVSL*TALPGFPSGDEGKT Trigger: TGTTTTCCCCTCATCTCCAGATGGGAAGCCTGGCAGCGCTGTCCAAAGGGATACTGTCTCTCCATTAGATAACTCCTTCCACTGTCTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR TCA 90 bp | TCTGTCGGTGATGTCAGCTACTCTTTATTTTCCAGTTGTGAGAACTaGAGCCCTAGAGAAGCCTGGGAATTGCTTAGGAGCTCAGGGAGA | + |
Preference number: 1 (lower is better) Translates to: SVGDVSYSLFSSCEN*SPREAWELLRSSGR Trigger: TCTCCCTGAGCTCCTAAGCAATTCCCAGGCTTCTCTAGGGCTTCAGTTCTCACAACTGGAAAATAAAGAGTAGCTGACATCACCGACAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR TCA 90 bp | AGACCACAGACACACAGATGTCATAGTCTTTTGCAGAAACTCCTGTaGAGAAATTCCTTCTGGTATGAAAAGACTCTGTCGGTGATGTCA | + |
Preference number: 1 (lower is better) Translates to: RPQTHRCHSLLQKLL*RNSFWYEKTLSVMS Trigger: TGACATCACCGACAGAGTCTTTTCATACCAGAAGGAATTTCTTCACAGGAGTTTCTGCAAAAGACTATGACATCTGTGTGTCTGTGGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR-3UTR TCA 90 bp | GAAGAAACCTGGCTGGGTAGCAGCCGCAGCCAAGGGTGGGGGAGTGTTAAGGCAGCCGCACTGGCTCAGTaGGAGGAGGCTCGTGGGTCC | + |
Preference number: 2 (lower is better) Translates to: EETWLGSSRSQGWGSVKAAALAQ*EEARGS Trigger: GGACCCACGAGCCTCCTCTCACTGAGCCAGTGCGGC...TGCCTTAACACTCCCCCACCCTTGGCTGCGGCTGCTACCCAGCCAGGTTTCTTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR-3UTR GCA 90 bp | GAAGAAACCTGGCTGGGTAGCAGCCGCAGCCAAGGGTGGGGGAGTGTTAAGGCAGGTAGGGGTCTCTCCTaGTGCATCCCACCGGGCCCA | + |
Preference number: 2 (lower is better) Translates to: EETWLGSSRSQGWGSVKAGRGLS*CIPPGP Trigger: TGGGCCCGGTGGGATGCAGCAGGAGAGACCCCTACC...TGCCTTAACACTCCCCCACCCTTGGCTGCGGCTGCTACCCAGCCAGGTTTCTTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR CAA 90 bp | CCCCTTCAACTTCCAGGCAGGGAAGGAGGGAACTGTGTGCTCTCCTaGGACTTGGAAGCTGCAGGCTGCCAGCTTCCTACCCCTACCCGC | + |
Preference number: 2 (lower is better) Translates to: PLQLPGREGGNCVLS*DLEAAGCQLPTPTR Trigger: GCGGGTAGGGGTAGGAAGCTGGCAGCCTGCAGCTTCCAAGTCCAAGGAGAGCACACAGTTCCCTCCTTCCCTGCCTGGAAGTTGAAGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR-3UTR GCA 90 bp | GAGCTACAGCCTCAGCTTTCCTCCCTCAGACCAGACCAGCAGCAGAAGCAACAGGGTAGGGGTCTCTCCTaGTGCATCCCACCGGGCCCA | + |
Preference number: 2 (lower is better) Translates to: ELQPQLSSLRPDQQQKQQGRGLS*CIPPGP Trigger: TGGGCCCGGTGGGATGCAGCAGGAGAGACCCCTACC...CTGTTGCTTCTGCTGCTGGTCTGGTCTGAGGGAGGAAAGCTGAGGCTGTAGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR-3UTR GCA 90 bp | GAAGAAACCTGGCTGGGTAGCAGCCGCAGCCAAGGGTGGGGGAGTGTTAAGGCACCTGGCCTTCAGTGCTaGCCCCCTGACTGCAGCTAT | + |
Preference number: 2 (lower is better) Translates to: EETWLGSSRSQGWGSVKAPGLQC*PPDCSY Trigger: ATAGCTGCAGTCAGGGGGGCAGCACTGAAGGCCAGG...TGCCTTAACACTCCCCCACCCTTGGCTGCGGCTGCTACCCAGCCAGGTTTCTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR-3UTR GCA 90 bp | CCTGGCTGGGTAGCAGCCGCAGCCAAGGGTGGGGGAGTGTTAAGGCAGTATCTAGGAGCTCAGGGAGAATaGCGAGGCTGGGACCAGAAC | + |
Preference number: 2 (lower is better) Translates to: PGWVAAAAKGGGVLRQYLGAQGE*RGWDQN Trigger: GTTCTGGTCCCAGCCTCGGCATTCTCCCTGAGCTCC...TAGATACTGCCTTAACACTCCCCCACCCTTGGCTGCGGCTGCTACCCAGCCAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR-3UTR CCA 90 bp | ACTGTGTGCTCTCCTTGGACTTGGAAGCTGCAGGCTGCCAGCTTCCTACCCCTACAGATGGGGCCACCATaGGCCTGTGGCCCCTGCAGA | + |
Preference number: 2 (lower is better) Translates to: TVCSPWTWKLQAASFLPLQMGPP*ACGPCR Trigger: TCTGCAGGGGCCACAGGCCCATGGTGGCCCCATCTG...TAGGGGTAGGAAGCTGGCAGCCTGCAGCTTCCAAGTCCAAGGAGAGCACACAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR-3UTR CCA 90 bp | GCACTGGCCCTTGGCTCTCAATCCCACAGGAAGTCAGAGGCAAAGGCAGCAGTCGGATGCGAACTGGGGTaGGAGAGGGGGCTCAGATGG | + |
Preference number: 2 (lower is better) Translates to: ALALGSQSHRKSEAKAAVGCELG*ERGLRW Trigger: CCATCTGAGCCCCCTCTCCCACCCCAGTTCGCATCC...GACTGCTGCCTTTGCCTCTGACTTCCTGTGGGATTGAGAGCCAAGGGCCAGTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR-3UTR CCA 90 bp | CCTGGCTGGGTAGCAGCCGCAGCCAAGGGTGGGGGAGTGTTAAGGCAGTATCTACGCTCACAAGGGCACTaGCCCTTGGCTCTCAATCCC | + |
Preference number: 2 (lower is better) Translates to: PGWVAAAAKGGGVLRQYLRSQGH*PLALNP Trigger: GGGATTGAGAGCCAAGGGCCAGTGCCCTTGTGAGCG...TAGATACTGCCTTAACACTCCCCCACCCTTGGCTGCGGCTGCTACCCAGCCAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR-3UTR TCA 90 bp | CGGCCTCTCACTGATTTCCCAGGCCACAGCCATTTCCTCATCTCGGACACCAATTGGGGAGAGGGGCTCTaGGGTGTGAGAACTGCCCCC | + |
Preference number: 2 (lower is better) Translates to: RPLTDFPGHSHFLISDTNWGEGL*GVRTAP Trigger: GGGGGCAGTTCTCACACCTCAGAGCCCCTCTCCCCA...ATTGGTGTCCGAGATGAGGAAATGGCTGTGGCCTGGGAAATCAGTGAGAGGCCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR-3UTR TCA 90 bp | TTGCTTAGGAGCTCAGGGAGAATGCCGAGGCTGGGACCAGAACCCAGGTTCCAGAGGGCGGTGTGGGGATaGGGCAGAGAGACAGATGCA | + |
Preference number: 2 (lower is better) Translates to: LLRSSGRMPRLGPEPRFQRAVWG*GRETDA Trigger: TGCATCTGTCTCTCTGCCTCATCCCCACACCGCCCT...CTGGAACCTGGGTTCTGGTCCCAGCCTCGGCATTCTCCCTGAGCTCCTAAGCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR-3UTR CCA 90 bp | CCAGATGGCCAGGCTGTGCTTTCAGTCCACTGCATTCTCATTCCCAAGCGGCCTACAGAAGACTGGGGGTaGCAGGGCGGTGTGGGGATG | + |
Preference number: 2 (lower is better) Translates to: PDGQAVLSVHCILIPKRPTEDWG*QGGVGM Trigger: CATCCCCACACCGCCCTGCCACCCCCAGTCTTCTGT...AGGCCGCTTGGGAATGAGAATGCAGTGGACTGAAAGCACAGCCTGGCCATCTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR-3UTR CCA 90 bp | CCTGGCTGGGTAGCAGCCGCAGCCAAGGGTGGGGGAGTGTTAAGGCAGTATCTAGAAGGAGAGACACTCTaGCCGCACTGGCTCAGTGAG | + |
Preference number: 2 (lower is better) Translates to: PGWVAAAAKGGGVLRQYLEGETL*PHWLSE Trigger: CTCACTGAGCCAGTGCGGCCAGAGTGTCTCTCCTTC...TAGATACTGCCTTAACACTCCCCCACCCTTGGCTGCGGCTGCTACCCAGCCAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR-3UTR CCA 90 bp | GAAGAAACCTGGCTGGGTAGCAGCCGCAGCCAAGGGTGGGGGAGTGTTAAGGCAGGCAGCTCCTGGTTGTaGTGTACAGAGAGGCGCTTC | + |
Preference number: 2 (lower is better) Translates to: EETWLGSSRSQGWGSVKAGSSWL*CTERRF Trigger: GAAGCGCCTCTCTGTACACCACAACCAGGAGCTGCC...TGCCTTAACACTCCCCCACCCTTGGCTGCGGCTGCTACCCAGCCAGGTTTCTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR-3UTR CCA 90 bp | GCACTGGCCCTTGGCTCTCAATCCCACAGGAAGTCAGAGGCAAAGGCAGCAGTCTGGAGGTGTGGGGAGTaGGCAGCTCCTGGTTGTGGT | + |
Preference number: 2 (lower is better) Translates to: ALALGSQSHRKSEAKAAVWRCGE*AAPGCG Trigger: ACCACAACCAGGAGCTGCCCACTCCCCACACCTCCA...GACTGCTGCCTTTGCCTCTGACTTCCTGTGGGATTGAGAGCCAAGGGCCAGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR-3UTR CCA 90 bp | CTTGGACTTGGAAGCTGCAGGCTGCCAGCTTCCTACCCCTACCCGCTATGTATAGAGAGGGGGCTCAGATaGGGCCACCATGGGCCTGTG | + |
Preference number: 2 (lower is better) Translates to: LGLGSCRLPASYPYPLCIERGLR*GHHGPV Trigger: CACAGGCCCATGGTGGCCCCATCTGAGCCCCCTCTC...TATACATAGCGGGTAGGGGTAGGAAGCTGGCAGCCTGCAGCTTCCAAGTCCAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR CAA 90 bp | CCCTTGCCTGCTTCGGAACTAGTGCGCTCACAAGGGCACTGGCCCTaGGCTCTCAATCCCACAGGAAGTCAGAGGCAAAGGCAGCAGTCT | + |
Preference number: 2 (lower is better) Translates to: PLPASELVRSQGHWP*ALNPTGSQRQRQQS Trigger: AGACTGCTGCCTTTGCCTCTGACTTCCTGTGGGATTGAGAGCCAAGGGCCAGTGCCCTTGTGAGCGCACTAGTTCCGAAGCAGGCAAGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR-3UTR TCA 90 bp | AGAGCCACCATCTCACTGAGCTACAGCCTCAGCTTTCCTCCCTCAGACCAGACCAGGGCGGTGTGGGGATaGGGCAGAGAGACAGATGCA | + |
Preference number: 2 (lower is better) Translates to: RATISLSYSLSFPPSDQTRAVWG*GRETDA Trigger: TGCATCTGTCTCTCTGCCTCATCCCCACACCGCCCT...GGTCTGGTCTGAGGGAGGAAAGCTGAGGCTGTAGCTCAGTGAGATGGTGGCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR-3UTR GCA 90 bp | CCAGATGGCCAGGCTGTGCTTTCAGTCCACTGCATTCTCATTCCCAAGCGGCCTCCTGGCCTTCAGTGCTaGCCCCCTGACTGCAGCTAT | + |
Preference number: 2 (lower is better) Translates to: PDGQAVLSVHCILIPKRPPGLQC*PPDCSY Trigger: ATAGCTGCAGTCAGGGGGGCAGCACTGAAGGCCAGG...AGGCCGCTTGGGAATGAGAATGCAGTGGACTGAAAGCACAGCCTGGCCATCTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR-3UTR GCA 90 bp | CCAGATGGCCAGGCTGTGCTTTCAGTCCACTGCATTCTCATTCCCAAGCGGCCTCCCTTTGGACAGCGCTaGCAGGCTTCCCATCTGGAG | + |
Preference number: 2 (lower is better) Translates to: PDGQAVLSVHCILIPKRPPFGQR*QASHLE Trigger: CTCCAGATGGGAAGCCTGGCAGCGCTGTCCAAAGGG...AGGCCGCTTGGGAATGAGAATGCAGTGGACTGAAAGCACAGCCTGGCCATCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR-3UTR GCA 90 bp | ACTGTGTGCTCTCCTTGGACTTGGAAGCTGCAGGCTGCCAGCTTCCTACCCCTACCCTTTGGACAGCGCTaGCAGGCTTCCCATCTGGAG | + |
Preference number: 2 (lower is better) Translates to: TVCSPWTWKLQAASFLPLPFGQR*QASHLE Trigger: CTCCAGATGGGAAGCCTGGCAGCGCTGTCCAAAGGG...TAGGGGTAGGAAGCTGGCAGCCTGCAGCTTCCAAGTCCAAGGAGAGCACACAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR-3UTR GCA 90 bp | GCACTGGCCCTTGGCTCTCAATCCCACAGGAAGTCAGAGGCAAAGGCAGCAGTCTGTGGCCCCTGCAGATaGTTTCTCTGGCTTGCCTCC | + |
Preference number: 2 (lower is better) Translates to: ALALGSQSHRKSEAKAAVCGPCR*FLWLAS Trigger: GGAGGCAAGCCAGAGAAAGCATCTGCAGGGGCCACA...GACTGCTGCCTTTGCCTCTGACTTCCTGTGGGATTGAGAGCCAAGGGCCAGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR-3UTR GCA 90 bp | CCTGGCTGGGTAGCAGCCGCAGCCAAGGGTGGGGGAGTGTTAAGGCAGTATCTACTTGGACTTGGAAGCTaGAGGCTGCCAGCTTCCTAC | + |
Preference number: 2 (lower is better) Translates to: PGWVAAAAKGGGVLRQYLLGLGS*RLPASY Trigger: GTAGGAAGCTGGCAGCCTGCAGCTTCCAAGTCCAAG...TAGATACTGCCTTAACACTCCCCCACCCTTGGCTGCGGCTGCTACCCAGCCAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR-3UTR CCA 90 bp | CTTGGACTTGGAAGCTGCAGGCTGCCAGCTTCCTACCCCTACCCGCTATGTATAACAGAAGACTGGGGGTaGCAGGGCGGTGTGGGGATG | + |
Preference number: 2 (lower is better) Translates to: LGLGSCRLPASYPYPLCITEDWG*QGGVGM Trigger: CATCCCCACACCGCCCTGCCACCCCCAGTCTTCTGT...TATACATAGCGGGTAGGGGTAGGAAGCTGGCAGCCTGCAGCTTCCAAGTCCAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR-3UTR CCA 90 bp | ACTGTGTGCTCTCCTTGGACTTGGAAGCTGCAGGCTGCCAGCTTCCTACCCCTACTAGGCCCCGGCACCTaGAGAGTGACATGTGAGGAG | + |
Preference number: 2 (lower is better) Translates to: TVCSPWTWKLQAASFLPLLGPGT*RVTCEE Trigger: CTCCTCACATGTCACTCTCCAGGTGCCGGGGCCTAG...TAGGGGTAGGAAGCTGGCAGCCTGCAGCTTCCAAGTCCAAGGAGAGCACACAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR-3UTR CCA 90 bp | GCACTGGCCCTTGGCTCTCAATCCCACAGGAAGTCAGAGGCAAAGGCAGCAGTCGGCAGCTCCTGGTTGTaGTGTACAGAGAGGCGCTTC | + |
Preference number: 2 (lower is better) Translates to: ALALGSQSHRKSEAKAAVGSSWL*CTERRF Trigger: GAAGCGCCTCTCTGTACACCACAACCAGGAGCTGCC...GACTGCTGCCTTTGCCTCTGACTTCCTGTGGGATTGAGAGCCAAGGGCCAGTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR-3UTR CCA 90 bp | CCTGGCTGGGTAGCAGCCGCAGCCAAGGGTGGGGGAGTGTTAAGGCAGTATCTAAAGGGCACTGGCCCTTaGCTCTCAATCCCACAGGAA | + |
Preference number: 2 (lower is better) Translates to: PGWVAAAAKGGGVLRQYLKGTGP*LSIPQE Trigger: TTCCTGTGGGATTGAGAGCCAAGGGCCAGTGCCCTT...TAGATACTGCCTTAACACTCCCCCACCCTTGGCTGCGGCTGCTACCCAGCCAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR-3UTR TCA 90 bp | AGAGCCACCATCTCACTGAGCTACAGCCTCAGCTTTCCTCCCTCAGACCAGACCAGGGGCTCTGAGGTGTaGGAACTGCCCCCATTGCTT | + |
Preference number: 2 (lower is better) Translates to: RATISLSYSLSFPPSDQTRGSEV*ELPPLL Trigger: AAGCAATGGGGGCAGTTCTCACACCTCAGAGCCCCT...GGTCTGGTCTGAGGGAGGAAAGCTGAGGCTGTAGCTCAGTGAGATGGTGGCTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
||
3UTR-3UTR TCA 90 bp | CTCACTGATTTCCCAGGCCACAGCCATTTCCTCATCTCGGACACCAATCTGGTTTGGGGAGAGGGGCTCTaGGGTGTGAGAACTGCCCCC | + |
Preference number: 2 (lower is better) Translates to: LTDFPGHSHFLISDTNLVWGEGL*GVRTAP Trigger: GGGGGCAGTTCTCACACCTCAGAGCCCCTCTCCCCA...AACCAGATTGGTGTCCGAGATGAGGAAATGGCTGTGGCCTGGGAAATCAGTGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR-3UTR TCA 90 bp | CTTGGACTTGGAAGCTGCAGGCTGCCAGCTTCCTACCCCTACCCGCTATGTATACAAGCGGCCTCTCACTaGTTTCCCAGGCCACAGCCA | + |
Preference number: 2 (lower is better) Translates to: LGLGSCRLPASYPYPLCIQAASH*FPRPQP Trigger: TGGCTGTGGCCTGGGAAATCAGTGAGAGGCCGCTTG...TATACATAGCGGGTAGGGGTAGGAAGCTGGCAGCCTGCAGCTTCCAAGTCCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
||
3UTR-3UTR TCA 90 bp | TCCTACCCCTACCCGCTATGTATATACCACCTAATGCCCTTGCCTGCTTCGGAACGAGGCCCAGCAGCCTaGGGCTCTCTCTGCTTGCAC | + |
Preference number: 2 (lower is better) Translates to: SYPYPLCIYHLMPLPASERGPAA*GSLCLH Trigger: GTGCAAGCAGAGAGAGCCTCAGGCTGCTGGGCCTCG...TTCCGAAGCAGGCAAGGGCATTAGGTGGTATATACATAGCGGGTAGGGGTAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
||
3UTR-3UTR GCA 90 bp | GTTGTGAGAACTGAAGCCCTAGAGAAGCCTGGGAATTGCTTAGGAGCTCAGGGAGGTAGGGGTCTCTCCTaGTGCATCCCACCGGGCCCA | + |
Preference number: 2 (lower is better) Translates to: VVRTEALEKPGNCLGAQGGRGLS*CIPPGP Trigger: TGGGCCCGGTGGGATGCAGCAGGAGAGACCCCTACC...TCCCTGAGCTCCTAAGCAATTCCCAGGCTTCTCTAGGGCTTCAGTTCTCACAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
||
3UTR-3UTR GCA 90 bp | CGGCCTCTCACTGATTTCCCAGGCCACAGCCATTTCCTCATCTCGGACACCAATCCCTTTGGACAGCGCTaGCAGGCTTCCCATCTGGAG | + |
Preference number: 2 (lower is better) Translates to: RPLTDFPGHSHFLISDTNPFGQR*QASHLE Trigger: CTCCAGATGGGAAGCCTGGCAGCGCTGTCCAAAGGG...ATTGGTGTCCGAGATGAGGAAATGGCTGTGGCCTGGGAAATCAGTGAGAGGCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
||
3UTR-3UTR GCA 90 bp | CTGCTTGCACTTGTCTTCAGCCATGGGAGAGCCACCATCTCACTGAGCTACAGCGGAGCTCAGGGAGAATaGCGAGGCTGGGACCAGAAC | + |
Preference number: 2 (lower is better) Translates to: LLALVFSHGRATISLSYSGAQGE*RGWDQN Trigger: GTTCTGGTCCCAGCCTCGGCATTCTCCCTGAGCTCC...GCTGTAGCTCAGTGAGATGGTGGCTCTCCCATGGCTGAAGACAAGTGCAAGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
||
3UTR-3UTR GCA 90 bp | CTCTCTCTGCTTGCACTTGTCTTCAGCCATGGGAGAGCCACCATCTCACTGAGCGGAGCTCAGGGAGAATaGCGAGGCTGGGACCAGAAC | + |
Preference number: 2 (lower is better) Translates to: LSLLALVFSHGRATISLSGAQGE*RGWDQN Trigger: GTTCTGGTCCCAGCCTCGGCATTCTCCCTGAGCTCC...GCTCAGTGAGATGGTGGCTCTCCCATGGCTGAAGACAAGTGCAAGCAGAGAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
||
3UTR-3UTR CCA 90 bp | ACTGTGTGCTCTCCTTGGACTTGGAAGCTGCAGGCTGCCAGCTTCCTACCCCTAAGGGTGAAATGGCAATaGGGCACAGGAGGCCAGCCT | + |
Preference number: 2 (lower is better) Translates to: TVCSPWTWKLQAASFLPLRVKWQ*GTGGQP Trigger: AGGCTGGCCTCCTGTGCCCCATTGCCATTTCACCCT...TAGGGGTAGGAAGCTGGCAGCCTGCAGCTTCCAAGTCCAAGGAGAGCACACAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
||
3UTR-3UTR TCA 90 bp | GCACTGGCCCTTGGCTCTCAATCCCACAGGAAGTCAGAGGCAAAGGCAGCAGTCCATAGGAGGAAGCAATaGCTGTTACGAGGTTGGCGG | + |
Preference number: 2 (lower is better) Translates to: ALALGSQSHRKSEAKAAVHRRKQ*LLRGWR Trigger: CCGCCAACCTCGTAACAGTCATTGCTTCCTCCTATG...GACTGCTGCCTTTGCCTCTGACTTCCTGTGGGATTGAGAGCCAAGGGCCAGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR-3UTR TCA 90 bp | CTTGGACTTGGAAGCTGCAGGCTGCCAGCTTCCTACCCCTACCCGCTATGTATAAGGGGCTCTGAGGTGTaGGAACTGCCCCCATTGCTT | + |
Preference number: 2 (lower is better) Translates to: LGLGSCRLPASYPYPLCIRGSEV*ELPPLL Trigger: AAGCAATGGGGGCAGTTCTCACACCTCAGAGCCCCT...TATACATAGCGGGTAGGGGTAGGAAGCTGGCAGCCTGCAGCTTCCAAGTCCAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
||
3UTR-3UTR TCA 90 bp | CCCTTGGCTCTCAATCCCACAGGAAGTCAGAGGCAAAGGCAGCAGTCTAAAGAGAGGGCGGTGTGGGGATaGGGCAGAGAGACAGATGCA | + |
Preference number: 2 (lower is better) Translates to: PLALNPTGSQRQRQQSKERAVWG*GRETDA Trigger: TGCATCTGTCTCTCTGCCTCATCCCCACACCGCCCT...CTCTTTAGACTGCTGCCTTTGCCTCTGACTTCCTGTGGGATTGAGAGCCAAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
||
3UTR-3UTR GCA 90 bp | CCTGGCTGGGTAGCAGCCGCAGCCAAGGGTGGGGGAGTGTTAAGGCAGTATCTAGCCAGCCTTATCTCTTaGTTCCAGCCTGGAACCAAT | + |
Preference number: 2 (lower is better) Translates to: PGWVAAAAKGGGVLRQYLASLIS*FQPGTN Trigger: ATTGGTTCCAGGCTGGAAGCAAGAGATAAGGCTGGC...TAGATACTGCCTTAACACTCCCCCACCCTTGGCTGCGGCTGCTACCCAGCCAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR-3UTR GCA 90 bp | GAAGAAACCTGGCTGGGTAGCAGCCGCAGCCAAGGGTGGGGGAGTGTTAAGGCAGAGAAGCCTGGGAATTaGTTAGGAGCTCAGGGAGAA | + |
Preference number: 2 (lower is better) Translates to: EETWLGSSRSQGWGSVKAEKPGN*LGAQGE Trigger: TTCTCCCTGAGCTCCTAAGCAATTCCCAGGCTTCTC...TGCCTTAACACTCCCCCACCCTTGGCTGCGGCTGCTACCCAGCCAGGTTTCTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR-3UTR GCA 90 bp | CTGTGGCCCCTGCAGATGCTTTCTCTGGCTTGCCTCCCTTGGCATTTTCTTATCTCCAGAGGGTGGAAATaGTGGCATGTGGGGCGCCTG | + |
Preference number: 2 (lower is better) Translates to: LWPLQMLSLACLPWHFLISRGWK*WHVGRL Trigger: CAGGCGCCCCACATGCCAGCATTTCCACCCTCTGGA...GATAAGAAAATGCCAAGGGAGGCAAGCCAGAGAAAGCATCTGCAGGGGCCACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR-3UTR GCA 90 bp | GAAGAAACCTGGCTGGGTAGCAGCCGCAGCCAAGGGTGGGGGAGTGTTAAGGCAAAGGAGGGAACTGTGTaGTCTCCTTGGACTTGGAAG | + |
Preference number: 2 (lower is better) Translates to: EETWLGSSRSQGWGSVKAKEGTV*SPWTWK Trigger: CTTCCAAGTCCAAGGAGAGCACACAGTTCCCTCCTT...TGCCTTAACACTCCCCCACCCTTGGCTGCGGCTGCTACCCAGCCAGGTTTCTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR-3UTR CCA 90 bp | GAAGAAACCTGGCTGGGTAGCAGCCGCAGCCAAGGGTGGGGGAGTGTTAAGGCATGCAGATGCTTTCTCTaGCTTGCCTCCCTTGGCATT | + |
Preference number: 2 (lower is better) Translates to: EETWLGSSRSQGWGSVKACRCFL*LASLGI Trigger: AATGCCAAGGGAGGCAAGCCAGAGAAAGCATCTGCA...TGCCTTAACACTCCCCCACCCTTGGCTGCGGCTGCTACCCAGCCAGGTTTCTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR-3UTR TCA 90 bp | CAGATGGCCAGGCTGTGCTTTCAGTCCACTGCATTCTCATTCCCAAGCGGCCTCCATAGGAGGAAGCAATaGCTGTTACGAGGTTGGCGG | + |
Preference number: 2 (lower is better) Translates to: QMARLCFQSTAFSFPSGLHRRKQ*LLRGWR Trigger: CCGCCAACCTCGTAACAGTCATTGCTTCCTCCTATG...GAGGCCGCTTGGGAATGAGAATGCAGTGGACTGAAAGCACAGCCTGGCCATCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR-3UTR TCA 90 bp | CTGTGGCCCCTGCAGATGCTTTCTCTGGCTTGCCTCCCTTGGCATTTTCTTATCAGGGGCTCTGAGGTGTaGGAACTGCCCCCATTGCTT | + |
Preference number: 2 (lower is better) Translates to: LWPLQMLSLACLPWHFLIRGSEV*ELPPLL Trigger: AAGCAATGGGGGCAGTTCTCACACCTCAGAGCCCCT...GATAAGAAAATGCCAAGGGAGGCAAGCCAGAGAAAGCATCTGCAGGGGCCACAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR-3UTR TCA 90 bp | AGAGCCACCATCTCACTGAGCTACAGCCTCAGCTTTCCTCCCTCAGACCAGACCCTGGCTCCTGGACTTTaGGCTAGGGTGAAATGGCAA | + |
Preference number: 2 (lower is better) Translates to: RATISLSYSLSFPPSDQTLAPGL*ARVKWQ Trigger: TTGCCATTTCACCCTAGCTCAAAGTCCAGGAGCCAG...GGTCTGGTCTGAGGGAGGAAAGCTGAGGCTGTAGCTCAGTGAGATGGTGGCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR-3UTR GCA 90 bp | GAAGAAACCTGGCTGGGTAGCAGCCGCAGCCAAGGGTGGGGGAGTGTTAAGGCAGAGAACTGCCCCCATTaGTTGGATCCTTTTCTTCTC | + |
Preference number: 2 (lower is better) Translates to: EETWLGSSRSQGWGSVKAENCPH*LDPFLL Trigger: GAGAAGAAAAGGATCCAAGCAATGGGGGCAGTTCTC...TGCCTTAACACTCCCCCACCCTTGGCTGCGGCTGCTACCCAGCCAGGTTTCTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR-3UTR GCA 90 bp | GAAGAAACCTGGCTGGGTAGCAGCCGCAGCCAAGGGTGGGGGAGTGTTAAGGCAACAGGCACACACACATaGACACACATGTGCATACCA | + |
Preference number: 2 (lower is better) Translates to: EETWLGSSRSQGWGSVKATGTHT*THMCIP Trigger: TGGTATGCACATGTGTGTGCATGTGTGTGTGCCTGT...TGCCTTAACACTCCCCCACCCTTGGCTGCGGCTGCTACCCAGCCAGGTTTCTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR-3UTR CCA 90 bp | GAGCTACAGCCTCAGCTTTCCTCCCTCAGACCAGACCAGCAGCAGAAGCAACAGCTTGAAGAGCCTTTCTaGAAGCCTGGCTCCTGGACT | + |
Preference number: 2 (lower is better) Translates to: ELQPQLSSLRPDQQQKQQLEEPF*KPGSWT Trigger: AGTCCAGGAGCCAGGCTTCCAGAAAGGCTCTTCAAG...CTGTTGCTTCTGCTGCTGGTCTGGTCTGAGGGAGGAAAGCTGAGGCTGTAGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR-3UTR CCA 90 bp | CTGTGGCCCCTGCAGATGCTTTCTCTGGCTTGCCTCCCTTGGCATTTTCTTATCGAAGGAGAGACACTCTaGCCGCACTGGCTCAGTGAG | + |
Preference number: 2 (lower is better) Translates to: LWPLQMLSLACLPWHFLIEGETL*PHWLSE Trigger: CTCACTGAGCCAGTGCGGCCAGAGTGTCTCTCCTTC...GATAAGAAAATGCCAAGGGAGGCAAGCCAGAGAAAGCATCTGCAGGGGCCACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR-3UTR TCA 90 bp | CGGCCTCTCACTGATTTCCCAGGCCACAGCCATTTCCTCATCTCGGACACCAATGTTTCTCCGGCTCCTTaGACACACAGAGGTACACGT | + |
Preference number: 2 (lower is better) Translates to: RPLTDFPGHSHFLISDTNVSPAP*THRGTR Trigger: ACGTGTACCTCTGTGTGTTCAAGGAGCCGGAGAAAC...ATTGGTGTCCGAGATGAGGAAATGGCTGTGGCCTGGGAAATCAGTGAGAGGCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR-3UTR TCA 90 bp | CTGCTTGCACTTGTCTTCAGCCATGGGAGAGCCACCATCTCACTGAGCTACAGCCTGGCTCCTGGACTTTaGGCTAGGGTGAAATGGCAA | + |
Preference number: 2 (lower is better) Translates to: LLALVFSHGRATISLSYSLAPGL*ARVKWQ Trigger: TTGCCATTTCACCCTAGCTCAAAGTCCAGGAGCCAG...GCTGTAGCTCAGTGAGATGGTGGCTCTCCCATGGCTGAAGACAAGTGCAAGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR-3UTR TCA 90 bp | CTTGGACTTGGAAGCTGCAGGCTGCCAGCTTCCTACCCCTACCCGCTATGTATATCCAGTTGTGAGAACTaGAGCCCTAGAGAAGCCTGG | + |
Preference number: 2 (lower is better) Translates to: LGLGSCRLPASYPYPLCISSCEN*SPREAW Trigger: CCAGGCTTCTCTAGGGCTTCAGTTCTCACAACTGGA...TATACATAGCGGGTAGGGGTAGGAAGCTGGCAGCCTGCAGCTTCCAAGTCCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR-3UTR TCA 90 bp | GCACTGGCCCTTGGCTCTCAATCCCACAGGAAGTCAGAGGCAAAGGCAGCAGTCAAGCAACAGCATACATaGCACCCAGTACAGCTACAC | + |
Preference number: 2 (lower is better) Translates to: ALALGSQSHRKSEAKAAVKQQHT*HPVQLH Trigger: GTGTAGCTGTACTGGGTGTCATGTATGCTGTTGCTT...GACTGCTGCCTTTGCCTCTGACTTCCTGTGGGATTGAGAGCCAAGGGCCAGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR-3UTR TCA 90 bp | CTGTGGCCCCTGCAGATGCTTTCTCTGGCTTGCCTCCCTTGGCATTTTCTTATCCTGGAGAGTGACATGTaGGGAGAATCCAGAGGGTGG | + |
Preference number: 2 (lower is better) Translates to: LWPLQMLSLACLPWHFLILESDM*GESRGW Trigger: CCACCCTCTGGATTCTCCTCACATGTCACTCTCCAG...GATAAGAAAATGCCAAGGGAGGCAAGCCAGAGAAAGCATCTGCAGGGGCCACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR-3UTR TCA 90 bp | TCCTACCCCTACCCGCTATGTATATACCACCTAATGCCCTTGCCTGCTTCGGAACCGGCACCTGGAGAGTaGCATGTGAGGAGAATCCAG | + |
Preference number: 2 (lower is better) Translates to: SYPYPLCIYHLMPLPASEPAPGE*HVRRIQ Trigger: CTGGATTCTCCTCACATGTCACTCTCCAGGTGCCGG...TTCCGAAGCAGGCAAGGGCATTAGGTGGTATATACATAGCGGGTAGGGGTAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR-3UTR GCA 90 bp | GAGCTACAGCCTCAGCTTTCCTCCCTCAGACCAGACCAGCAGCAGAAGCAACAGGAGAAGCCTGGGAATTaGTTAGGAGCTCAGGGAGAA | + |
Preference number: 2 (lower is better) Translates to: ELQPQLSSLRPDQQQKQQEKPGN*LGAQGE Trigger: TTCTCCCTGAGCTCCTAAGCAATTCCCAGGCTTCTC...CTGTTGCTTCTGCTGCTGGTCTGGTCTGAGGGAGGAAAGCTGAGGCTGTAGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR-3UTR GCA 90 bp | GAAGAAACCTGGCTGGGTAGCAGCCGCAGCCAAGGGTGGGGGAGTGTTAAGGCAATGCTTTCTCTGGCTTaGCTCCCTTGGCATTTTCTT | + |
Preference number: 2 (lower is better) Translates to: EETWLGSSRSQGWGSVKAMLSLA*LPWHFL Trigger: AAGAAAATGCCAAGGGAGGCAAGCCAGAGAAAGCAT...TGCCTTAACACTCCCCCACCCTTGGCTGCGGCTGCTACCCAGCCAGGTTTCTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR-3UTR CCA 90 bp | TGGCAATGGGGCACAGGAGGCCAGCCTTATCTCTTGCTTCCAGCCTGGAACCAAAATAGGTATATGGGCTaGCACAGGGTTTGGGGAGAG | + |
Preference number: 2 (lower is better) Translates to: WQWGTGGQPYLLLPAWNQNRYMG*HRVWGE Trigger: CTCTCCCCAAACCCTGTGCCAGCCCATATACCTATT...TTGGTTCCAGGCTGGAAGCAAGAGATAAGGCTGGCCTCCTGTGCCCCATTGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR-3UTR CCA 90 bp | CAGATGGCCAGGCTGTGCTTTCAGTCCACTGCATTCTCATTCCCAAGCGGCCTCAATAGGTATATGGGCTaGCACAGGGTTTGGGGAGAG | + |
Preference number: 2 (lower is better) Translates to: QMARLCFQSTAFSFPSGLNRYMG*HRVWGE Trigger: CTCTCCCCAAACCCTGTGCCAGCCCATATACCTATT...GAGGCCGCTTGGGAATGAGAATGCAGTGGACTGAAAGCACAGCCTGGCCATCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR-3UTR CCA 90 bp | CTGCTTGCACTTGTCTTCAGCCATGGGAGAGCCACCATCTCACTGAGCTACAGCCTTGAAGAGCCTTTCTaGAAGCCTGGCTCCTGGACT | + |
Preference number: 2 (lower is better) Translates to: LLALVFSHGRATISLSYSLEEPF*KPGSWT Trigger: AGTCCAGGAGCCAGGCTTCCAGAAAGGCTCTTCAAG...GCTGTAGCTCAGTGAGATGGTGGCTCTCCCATGGCTGAAGACAAGTGCAAGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR-3UTR TCA 90 bp | CCCTTGGCTCTCAATCCCACAGGAAGTCAGAGGCAAAGGCAGCAGTCTAAAGAGCATAGGAGGAAGCAATaGCTGTTACGAGGTTGGCGG | + |
Preference number: 2 (lower is better) Translates to: PLALNPTGSQRQRQQSKEHRRKQ*LLRGWR Trigger: CCGCCAACCTCGTAACAGTCATTGCTTCCTCCTATG...CTCTTTAGACTGCTGCCTTTGCCTCTGACTTCCTGTGGGATTGAGAGCCAAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR-3UTR TCA 90 bp | CTGTGGCCCCTGCAGATGCTTTCTCTGGCTTGCCTCCCTTGGCATTTTCTTATCGTTTCTCCGGCTCCTTaGACACACAGAGGTACACGT | + |
Preference number: 2 (lower is better) Translates to: LWPLQMLSLACLPWHFLIVSPAP*THRGTR Trigger: ACGTGTACCTCTGTGTGTTCAAGGAGCCGGAGAAAC...GATAAGAAAATGCCAAGGGAGGCAAGCCAGAGAAAGCATCTGCAGGGGCCACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR-3UTR TCA 90 bp | CAGATGGCCAGGCTGTGCTTTCAGTCCACTGCATTCTCATTCCCAAGCGGCCTCCTTCCCATCTGGAGATaGGGGGAAAACACAAATAGG | + |
Preference number: 2 (lower is better) Translates to: QMARLCFQSTAFSFPSGLLPIWR*GENTNR Trigger: CCTATTTGTGTTTTCCCCTCATCTCCAGATGGGAAG...GAGGCCGCTTGGGAATGAGAATGCAGTGGACTGAAAGCACAGCCTGGCCATCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR-3UTR CCA 90 bp | CTTGGACTTGGAAGCTGCAGGCTGCCAGCTTCCTACCCCTACCCGCTATGTATAAATAGGTATATGGGCTaGCACAGGGTTTGGGGAGAG | + |
Preference number: 2 (lower is better) Translates to: LGLGSCRLPASYPYPLCINRYMG*HRVWGE Trigger: CTCTCCCCAAACCCTGTGCCAGCCCATATACCTATT...TATACATAGCGGGTAGGGGTAGGAAGCTGGCAGCCTGCAGCTTCCAAGTCCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR-3UTR CCA 90 bp | ACTGTGTGCTCTCCTTGGACTTGGAAGCTGCAGGCTGCCAGCTTCCTACCCCTAACACAAATAGGTATATaGGCTGGCACAGGGTTTGGG | + |
Preference number: 2 (lower is better) Translates to: TVCSPWTWKLQAASFLPLTQIGI*AGTGFG Trigger: CCCAAACCCTGTGCCAGCCCATATACCTATTTGTGT...TAGGGGTAGGAAGCTGGCAGCCTGCAGCTTCCAAGTCCAAGGAGAGCACACAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR-3UTR CCA 90 bp | CTCTCTCTGCTTGCACTTGTCTTCAGCCATGGGAGAGCCACCATCTCACTGAGCTACCATCCCCAAACCTaGCTTCTCTCTAAGGCCCAT | + |
Preference number: 2 (lower is better) Translates to: LSLLALVFSHGRATISLSYHPQT*LLSKAH Trigger: ATGGGCCTTAGAGAGAAGCCAGGTTTGGGGATGGTA...GCTCAGTGAGATGGTGGCTCTCCCATGGCTGAAGACAAGTGCAAGCAGAGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
||
3UTR-3UTR TCA 90 bp | CTGCTTGCACTTGTCTTCAGCCATGGGAGAGCCACCATCTCACTGAGCTACAGCCTTCCCATCTGGAGATaGGGGGAAAACACAAATAGG | + |
Preference number: 2 (lower is better) Translates to: LLALVFSHGRATISLSYSLPIWR*GENTNR Trigger: CCTATTTGTGTTTTCCCCTCATCTCCAGATGGGAAG...GCTGTAGCTCAGTGAGATGGTGGCTCTCCCATGGCTGAAGACAAGTGCAAGCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
||
3UTR-3UTR TCA 90 bp | CTTGGACTTGGAAGCTGCAGGCTGCCAGCTTCCTACCCCTACCCGCTATGTATACTTCCCATCTGGAGATaGGGGGAAAACACAAATAGG | + |
Preference number: 2 (lower is better) Translates to: LGLGSCRLPASYPYPLCILPIWR*GENTNR Trigger: CCTATTTGTGTTTTCCCCTCATCTCCAGATGGGAAG...TATACATAGCGGGTAGGGGTAGGAAGCTGGCAGCCTGCAGCTTCCAAGTCCAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
||
3UTR-3UTR TCA 90 bp | TCCTACCCCTACCCGCTATGTATATACCACCTAATGCCCTTGCCTGCTTCGGAATCCAGTTGTGAGAACTaGAGCCCTAGAGAAGCCTGG | + |
Preference number: 2 (lower is better) Translates to: SYPYPLCIYHLMPLPASESSCEN*SPREAW Trigger: CCAGGCTTCTCTAGGGCTTCAGTTCTCACAACTGGA...TTCCGAAGCAGGCAAGGGCATTAGGTGGTATATACATAGCGGGTAGGGGTAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
||
3UTR-3UTR TCA 90 bp | CTTGGACTTGGAAGCTGCAGGCTGCCAGCTTCCTACCCCTACCCGCTATGTATAAAGCAACAGCATACATaGCACCCAGTACAGCTACAC | + |
Preference number: 2 (lower is better) Translates to: LGLGSCRLPASYPYPLCIKQQHT*HPVQLH Trigger: GTGTAGCTGTACTGGGTGTCATGTATGCTGTTGCTT...TATACATAGCGGGTAGGGGTAGGAAGCTGGCAGCCTGCAGCTTCCAAGTCCAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR-3UTR CCA 90 bp | CCACTTGGCTCACTGTATTTCCTTAAGCTTGCTCTTGAAGAGCCTTTCTGGAAGAGGGTGAAATGGCAATaGGGCACAGGAGGCCAGCCT | + |
Preference number: 2 (lower is better) Translates to: PLGSLYFLKLALEEPFWKRVKWQ*GTGGQP Trigger: AGGCTGGCCTCCTGTGCCCCATTGCCATTTCACCCT...CTTCCAGAAAGGCTCTTCAAGAGCAAGCTTAAGGAAATACAGTGAGCCAAGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR-3UTR GCA 90 bp | GTTGTGAGAACTGAAGCCCTAGAGAAGCCTGGGAATTGCTTAGGAGCTCAGGGAGAGAACTGCCCCCATTaGTTGGATCCTTTTCTTCTC | + |
Preference number: 2 (lower is better) Translates to: VVRTEALEKPGNCLGAQGENCPH*LDPFLL Trigger: GAGAAGAAAAGGATCCAAGCAATGGGGGCAGTTCTC...TCCCTGAGCTCCTAAGCAATTCCCAGGCTTCTCTAGGGCTTCAGTTCTCACAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR-3UTR GCA 90 bp | GTTGTGAGAACTGAAGCCCTAGAGAAGCCTGGGAATTGCTTAGGAGCTCAGGGAACAGGCACACACACATaGACACACATGTGCATACCA | + |
Preference number: 2 (lower is better) Translates to: VVRTEALEKPGNCLGAQGTGTHT*THMCIP Trigger: TGGTATGCACATGTGTGTGCATGTGTGTGTGCCTGT...TCCCTGAGCTCCTAAGCAATTCCCAGGCTTCTCTAGGGCTTCAGTTCTCACAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
||
3UTR-3UTR TCA 90 bp | CCACTTGGCTCACTGTATTTCCTTAAGCTTGCTCTTGAAGAGCCTTTCTGGAAGCTGGCTCCTGGACTTTaGGCTAGGGTGAAATGGCAA | + |
Preference number: 2 (lower is better) Translates to: PLGSLYFLKLALEEPFWKLAPGL*ARVKWQ Trigger: TTGCCATTTCACCCTAGCTCAAAGTCCAGGAGCCAG...CTTCCAGAAAGGCTCTTCAAGAGCAAGCTTAAGGAAATACAGTGAGCCAAGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR-3UTR GCA 90 bp | CCCTTGGCTCTCAATCCCACAGGAAGTCAGAGGCAAAGGCAGCAGTCTAAAGAGACATGCACACACATGTaGATACCATACCATACCATA | + |
Preference number: 2 (lower is better) Translates to: PLALNPTGSQRQRQQSKETCTHM*IPYHTI Trigger: TATGGTATGGTATGGTATGCACATGTGTGTGCATGT...CTCTTTAGACTGCTGCCTTTGCCTCTGACTTCCTGTGGGATTGAGAGCCAAGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
||
3UTR-3UTR CCA 90 bp | GTTGTGAGAACTGAAGCCCTAGAGAAGCCTGGGAATTGCTTAGGAGCTCAGGGAACTGCCCCCATTGCTTaGATCCTTTTCTTCTCAAAA | + |
Preference number: 2 (lower is better) Translates to: VVRTEALEKPGNCLGAQGTAPIA*ILFFSK Trigger: TTTTGAGAAGAAAAGGATCCAAGCAATGGGGGCAGT...TCCCTGAGCTCCTAAGCAATTCCCAGGCTTCTCTAGGGCTTCAGTTCTCACAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
||
3UTR-3UTR GCA 90 bp | CCACTTGGCTCACTGTATTTCCTTAAGCTTGCTCTTGAAGAGCCTTTCTGGAAGGAGAACTGCCCCCATTaGTTGGATCCTTTTCTTCTC | + |
Preference number: 2 (lower is better) Translates to: PLGSLYFLKLALEEPFWKENCPH*LDPFLL Trigger: GAGAAGAAAAGGATCCAAGCAATGGGGGCAGTTCTC...CTTCCAGAAAGGCTCTTCAAGAGCAAGCTTAAGGAAATACAGTGAGCCAAGTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
||
3UTR GCA 72 bp | GGACCAGTGGACCAGCAGGGTAGGGGTCTCTCCTGCTaGATCCCACCGGGCCCAGGTCAGCGCCCCGTGCAC | + |
Preference number: 3 (lower is better) Translates to: GPVDQQGRGLSC*IPPGPGQRPVH Trigger: GTGCACGGGGCGCTGACCTGGGCCCGGTGGGATGCAGCAGGAGAGACCCCTACCCTGCTGGTCCACTGGTCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR CCA 72 bp | ATGCTGGCATGTGGGGCGCCTGAAGGAGAGACACTCTaGCCGCACTGGCTCAGTGAGAGGAGGCTCGTGGGT | + |
Preference number: 3 (lower is better) Translates to: MLACGAPEGETL*PHWLSERRLVG Trigger: ACCCACGAGCCTCCTCTCACTGAGCCAGTGCGGCCAGAGTGTCTCTCCTTCAGGCGCCCCACATGCCAGCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR CCA 72 bp | CTAGGGGGAGGTAAGCTGGGCTGGAGGTGTGGGGAGTaGGCAGCTCCTGGTTGTGGTGTACAGAGAGGCGCT | + |
Preference number: 3 (lower is better) Translates to: LGGGKLGWRCGE*AAPGCGVQRGA Trigger: AGCGCCTCTCTGTACACCACAACCAGGAGCTGCCCACTCCCCACACCTCCAGCCCAGCTTACCTCCCCCTAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR CCA 72 bp | CCTCCTTCTCACACGCCCACTCTAGGCCCCGGCACCTaGAGAGTGACATGTGAGGAGAATCCAGAGGGTGGA | + |
Preference number: 3 (lower is better) Translates to: PPSHTPTLGPGT*RVTCEENPEGG Trigger: TCCACCCTCTGGATTCTCCTCACATGTCACTCTCCAGGTGCCGGGGCCTAGAGTGGGCGTGTGAGAAGGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR GCA 72 bp | CCCTTCAACTTCCAGGCAGGGAAGGAGGGAACTGTGTaGTCTCCTTGGACTTGGAAGCTGCAGGCTGCCAGC | + |
Preference number: 3 (lower is better) Translates to: PFNFQAGKEGTV*SPWTWKLQAAS Trigger: GCTGGCAGCCTGCAGCTTCCAAGTCCAAGGAGAGCACACAGTTCCCTCCTTCCCTGCCTGGAAGTTGAAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR CCA 72 bp | GGGAATTGCTTAGGAGCTCAGGGAGAATGCCGAGGCTaGGACCAGAACCCAGGTTCCAGATGGCCAGGCTGT | + |
Preference number: 3 (lower is better) Translates to: GNCLGAQGECRG*DQNPGSRWPGC Trigger: ACAGCCTGGCCATCTGGAACCTGGGTTCTGGTCCCAGCCTCGGCATTCTCCCTGAGCTCCTAAGCAATTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR CCA 72 bp | TTCCAGGCAGGGAAGGAGGGAACTGTGTGCTCTCCTTaGACTTGGAAGCTGCAGGCTGCCAGCTTCCTACCC | + |
Preference number: 3 (lower is better) Translates to: FQAGKEGTVCSP*TWKLQAASFLP Trigger: GGGTAGGAAGCTGGCAGCCTGCAGCTTCCAAGTCCAAGGAGAGCACACAGTTCCCTCCTTCCCTGCCTGGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR-3UTR CAA 90 bp | CCCTTGGCTCTCAATCCCACAGGAAGTCAGAGGCAAAGGCAGCAGTCTAAAGAGGTGGGCAGCTCCTGGTaGTGGTGTACAGAGAGGCGC | + |
Preference number: 3 (lower is better) Translates to: PLALNPTGSQRQRQQSKEVGSSW*WCTERR Trigger: GCGCCTCTCTGTACACCACAACCAGGAGCTGCCCAC...CTCTTTAGACTGCTGCCTTTGCCTCTGACTTCCTGTGGGATTGAGAGCCAAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR GCA 72 bp | CTGGGACCAGAACCCAGGTTCCAGATGGCCAGGCTGTaGTTTCAGTCCACTGCATTCTCATTCCCAAGCGGC | + |
Preference number: 3 (lower is better) Translates to: LGPEPRFQMARL*FQSTAFSFPSG Trigger: GCCGCTTGGGAATGAGAATGCAGTGGACTGAAAGCACAGCCTGGCCATCTGGAACCTGGGTTCTGGTCCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR CCA 72 bp | GGGCGGTGTGGGGATGAGGCAGAGAGACAGATGCACTaGTTAGAGACCGGTGAGAACAGGTCATACCATCCC | + |
Preference number: 3 (lower is better) Translates to: GRCGDEAERQMH*LETGENRSYHP Trigger: GGGATGGTATGACCTGTTCTCACCGGTCTCTAACCAGTGCATCTGTCTCTCTGCCTCATCCCCACACCGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR CCA 72 bp | TTGCCTGCTTCGGAACTAGTGCGCTCACAAGGGCACTaGCCCTTGGCTCTCAATCCCACAGGAAGTCAGAGG | + |
Preference number: 3 (lower is better) Translates to: LPASELVRSQGH*PLALNPTGSQR Trigger: CCTCTGACTTCCTGTGGGATTGAGAGCCAAGGGCCAGTGCCCTTGTGAGCGCACTAGTTCCGAAGCAGGCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR-3UTR CAA 90 bp | TGGCAATGGGGCACAGGAGGCCAGCCTTATCTCTTGCTTCCAGCCTGGAACCAAGGTTTCTCCGGCTCCTaGAACACACAGAGGTACACG | + |
Preference number: 3 (lower is better) Translates to: WQWGTGGQPYLLLPAWNQGFSGS*NTQRYT Trigger: CGTGTACCTCTGTGTGTTCAAGGAGCCGGAGAAACC...TTGGTTCCAGGCTGGAAGCAAGAGATAAGGCTGGCCTCCTGTGCCCCATTGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR-3UTR CAA 90 bp | CCAGATGGCCAGGCTGTGCTTTCAGTCCACTGCATTCTCATTCCCAAGCGGCCTGGCCAGCCTTATCTCTaGCTTCCAGCCTGGAACCAA | + |
Preference number: 3 (lower is better) Translates to: PDGQAVLSVHCILIPKRPGQPYL*LPAWNQ Trigger: TTGGTTCCAGGCTGGAAGCAAGAGATAAGGCTGGCC...AGGCCGCTTGGGAATGAGAATGCAGTGGACTGAAAGCACAGCCTGGCCATCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR-3UTR CAA 90 bp | CAGATGGCCAGGCTGTGCTTTCAGTCCACTGCATTCTCATTCCCAAGCGGCCTCGGCCAGCCTTATCTCTaGCTTCCAGCCTGGAACCAA | + |
Preference number: 3 (lower is better) Translates to: QMARLCFQSTAFSFPSGLGQPYL*LPAWNQ Trigger: TTGGTTCCAGGCTGGAAGCAAGAGATAAGGCTGGCC...GAGGCCGCTTGGGAATGAGAATGCAGTGGACTGAAAGCACAGCCTGGCCATCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR-3UTR CAA 90 bp | CTCTCTCTGCTTGCACTTGTCTTCAGCCATGGGAGAGCCACCATCTCACTGAGCGGTTTCTCCGGCTCCTaGAACACACAGAGGTACACG | + |
Preference number: 3 (lower is better) Translates to: LSLLALVFSHGRATISLSGFSGS*NTQRYT Trigger: CGTGTACCTCTGTGTGTTCAAGGAGCCGGAGAAACC...GCTCAGTGAGATGGTGGCTCTCCCATGGCTGAAGACAAGTGCAAGCAGAGAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR-3UTR CAA 90 bp | GAGCTACAGCCTCAGCTTTCCTCCCTCAGACCAGACCAGCAGCAGAAGCAACAGAGAGAAGCCTGGGAATaGCTTAGGAGCTCAGGGAGA | + |
Preference number: 3 (lower is better) Translates to: ELQPQLSSLRPDQQQKQQREAWE*LRSSGR Trigger: TCTCCCTGAGCTCCTAAGCAATTCCCAGGCTTCTCT...CTGTTGCTTCTGCTGCTGGTCTGGTCTGAGGGAGGAAAGCTGAGGCTGTAGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR TCA 72 bp | TTTCTGGAAGCCTGGCTCCTGGACTTTGAGCTAGGGTaGAATGGCAATGGGGCACAGGAGGCCAGCCTTATC | + |
Preference number: 3 (lower is better) Translates to: FLEAWLLDFELG*NGNGAQEASLI Trigger: GATAAGGCTGGCCTCCTGTGCCCCATTGCCATTTCACCCTAGCTCAAAGTCCAGGAGCCAGGCTTCCAGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR TCA 72 bp | CACTTGTCTTCAGCCATGGGAGAGCCACCATCTCACTaGGCTACAGCCTCAGCTTTCCTCCCTCAGACCAGA | + |
Preference number: 3 (lower is better) Translates to: HLSSAMGEPPSH*ATASAFLPQTR Trigger: TCTGGTCTGAGGGAGGAAAGCTGAGGCTGTAGCTCAGTGAGATGGTGGCTCTCCCATGGCTGAAGACAAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR GCA 72 bp | CTACCCGCTATGTATATACCACCTAATGCCCTTGCCTaGTTCGGAACTAGTGCGCTCACAAGGGCACTGGCC | + |
Preference number: 3 (lower is better) Translates to: LPAMYIPPNALA*FGTSALTRALA Trigger: GGCCAGTGCCCTTGTGAGCGCACTAGTTCCGAAGCAGGCAAGGGCATTAGGTGGTATATACATAGCGGGTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR TCA 72 bp | CTGGAGACAGACCCGGTTTTGGTTTCTCCGGCTCCTTaGACACACAGAGGTACACGTCCTACCATAGGAGGA | + |
Preference number: 3 (lower is better) Translates to: LETDPVLVSPAP*THRGTRPTIGG Trigger: TCCTCCTATGGTAGGACGTGTACCTCTGTGTGTTCAAGGAGCCGGAGAAACCAAAACCGGGTCTGTCTCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR GCA 72 bp | AATGGCAATGGGGCACAGGAGGCCAGCCTTATCTCTTaGTTCCAGCCTGGAACCAATAGACAGAAGACTGGG | + |
Preference number: 3 (lower is better) Translates to: NGNGAQEASLIS*FQPGTNRQKTG Trigger: CCCAGTCTTCTGTCTATTGGTTCCAGGCTGGAAGCAAGAGATAAGGCTGGCCTCCTGTGCCCCATTGCCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR GCA 72 bp | CAGGTTCCAGATGGCCAGGCTGTGCTTTCAGTCCACTaGATTCTCATTCCCAAGCGGCCTCTCACTGATTTC | + |
Preference number: 3 (lower is better) Translates to: QVPDGQAVLSVH*ILIPKRPLTDF Trigger: GAAATCAGTGAGAGGCCGCTTGGGAATGAGAATGCAGTGGACTGAAAGCACAGCCTGGCCATCTGGAACCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR GCA 72 bp | AACTGTGTGCTCTCCTTGGACTTGGAAGCTGCAGGCTaGCAGCTTCCTACCCCTACCCGCTATGTATATACC | + |
Preference number: 3 (lower is better) Translates to: NCVLSLDLEAAG*QLPTPTRYVYT Trigger: GGTATATACATAGCGGGTAGGGGTAGGAAGCTGGCAGCCTGCAGCTTCCAAGTCCAAGGAGAGCACACAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR-3UTR CAA 90 bp | AGAACAGGTCATACCATCCCCAAACCTGGCTTCTCTCTAAGGCCCATCTTACCTGGTTTCTCCGGCTCCTaGAACACACAGAGGTACACG | + |
Preference number: 3 (lower is better) Translates to: RTGHTIPKPGFSLRPILPGFSGS*NTQRYT Trigger: CGTGTACCTCTGTGTGTTCAAGGAGCCGGAGAAACC...AGGTAAGATGGGCCTTAGAGAGAAGCCAGGTTTGGGGATGGTATGACCTGTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR-3UTR CAA 90 bp | CGGCCTCTCACTGATTTCCCAGGCCACAGCCATTTCCTCATCTCGGACACCAATTCCTTAAGCTTGCTCTaGAAGAGCCTTTCTGGAAGC | + |
Preference number: 3 (lower is better) Translates to: RPLTDFPGHSHFLISDTNSLSLL*KSLSGS Trigger: GCTTCCAGAAAGGCTCTTCAAGAGCAAGCTTAAGGA...ATTGGTGTCCGAGATGAGGAAATGGCTGTGGCCTGGGAAATCAGTGAGAGGCCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR-3UTR CAA 90 bp | GAAGAAACCTGGCTGGGTAGCAGCCGCAGCCAAGGGTGGGGGAGTGTTAAGGCATGTATTTCCTTAAGCTaGCTCTTGAAGAGCCTTTCT | + |
Preference number: 3 (lower is better) Translates to: EETWLGSSRSQGWGSVKACISLS*LLKSLS Trigger: AGAAAGGCTCTTCAAGAGCAAGCTTAAGGAAATACA...TGCCTTAACACTCCCCCACCCTTGGCTGCGGCTGCTACCCAGCCAGGTTTCTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR-3UTR CAA 90 bp | CCTGGCTGGGTAGCAGCCGCAGCCAAGGGTGGGGGAGTGTTAAGGCAGTATCTAATATCATACAGCCACTaGGCTCACTGTATTTCCTTA | + |
Preference number: 3 (lower is better) Translates to: PGWVAAAAKGGGVLRQYLISYSH*AHCISL Trigger: TAAGGAAATACAGTGAGCCAAGTGGCTGTATGATAT...TAGATACTGCCTTAACACTCCCCCACCCTTGGCTGCGGCTGCTACCCAGCCAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR-3UTR CAA 90 bp | TCCTACCCCTACCCGCTATGTATATACCACCTAATGCCCTTGCCTGCTTCGGAATCTCTCTGCTTGCACTaGTCTTCAGCCATGGGAGAG | + |
Preference number: 3 (lower is better) Translates to: SYPYPLCIYHLMPLPASESLCLH*SSAMGE Trigger: CTCTCCCATGGCTGAAGACAAGTGCAAGCAGAGAGA...TTCCGAAGCAGGCAAGGGCATTAGGTGGTATATACATAGCGGGTAGGGGTAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR-3UTR CAA 90 bp | CCCTTGGCTCTCAATCCCACAGGAAGTCAGAGGCAAAGGCAGCAGTCTAAAGAGGATGCTTTCTCTGGCTaGCCTCCCTTGGCATTTTCT | + |
Preference number: 3 (lower is better) Translates to: PLALNPTGSQRQRQQSKEDAFSG*PPLAFS Trigger: AGAAAATGCCAAGGGAGGCAAGCCAGAGAAAGCATC...CTCTTTAGACTGCTGCCTTTGCCTCTGACTTCCTGTGGGATTGAGAGCCAAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR-3UTR CAA 90 bp | CTGTGGCCCCTGCAGATGCTTTCTCTGGCTTGCCTCCCTTGGCATTTTCTTATCTCCTTAAGCTTGCTCTaGAAGAGCCTTTCTGGAAGC | + |
Preference number: 3 (lower is better) Translates to: LWPLQMLSLACLPWHFLISLSLL*KSLSGS Trigger: GCTTCCAGAAAGGCTCTTCAAGAGCAAGCTTAAGGA...GATAAGAAAATGCCAAGGGAGGCAAGCCAGAGAAAGCATCTGCAGGGGCCACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR TCA 72 bp | TCCCATGTCCGTGCACATACACCTCCAGGTACCTCGTaGGACCACAGACACACAGATGTCATAGTCTTTTGC | + |
Preference number: 3 (lower is better) Translates to: SHVRAHTPPGTS*DHRHTDVIVFC Trigger: GCAAAAGACTATGACATCTGTGTGTCTGTGGTCTCACGAGGTACCTGGAGGTGTATGTGCACGGACATGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR TCA 72 bp | CTCAGACCAGACCAGCAGCAGAAGCAACAGCATACATaGCACCCAGTACAGCTACACACACACCACTTTTCC | + |
Preference number: 3 (lower is better) Translates to: LRPDQQQKQQHT*HPVQLHTHHFS Trigger: GGAAAAGTGGTGTGTGTGTAGCTGTACTGGGTGTCATGTATGCTGTTGCTTCTGCTGCTGGTCTGGTCTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR CCA 72 bp | TGGAAGGAGTTATCTAATGGAGAGACAGTATCCCTTTaGACAGCGCTGCCAGGCTTCCCATCTGGAGATGAG | + |
Preference number: 3 (lower is better) Translates to: WKELSNGETVSL*TALPGFPSGDE Trigger: CTCATCTCCAGATGGGAAGCCTGGCAGCGCTGTCCAAAGGGATACTGTCTCTCCATTAGATAACTCCTTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR-3UTR CAA 90 bp | AGAGCCACCATCTCACTGAGCTACAGCCTCAGCTTTCCTCCCTCAGACCAGACCATATCATACAGCCACTaGGCTCACTGTATTTCCTTA | + |
Preference number: 3 (lower is better) Translates to: RATISLSYSLSFPPSDQTISYSH*AHCISL Trigger: TAAGGAAATACAGTGAGCCAAGTGGCTGTATGATAT...GGTCTGGTCTGAGGGAGGAAAGCTGAGGCTGTAGCTCAGTGAGATGGTGGCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR-3UTR CAA 90 bp | CTGTGGCCCCTGCAGATGCTTTCTCTGGCTTGCCTCCCTTGGCATTTTCTTATCTGTATTTCCTTAAGCTaGCTCTTGAAGAGCCTTTCT | + |
Preference number: 3 (lower is better) Translates to: LWPLQMLSLACLPWHFLICISLS*LLKSLS Trigger: AGAAAGGCTCTTCAAGAGCAAGCTTAAGGAAATACA...GATAAGAAAATGCCAAGGGAGGCAAGCCAGAGAAAGCATCTGCAGGGGCCACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR TCA 72 bp | GATGTCAGCTACTCTTTATTTTCCAGTTGTGAGAACTaGAGCCCTAGAGAAGCCTGGGAATTGCTTAGGAGC | + |
Preference number: 3 (lower is better) Translates to: DVSYSLFSSCEN*SPREAWELLRS Trigger: GCTCCTAAGCAATTCCCAGGCTTCTCTAGGGCTTCAGTTCTCACAACTGGAAAATAAAGAGTAGCTGACATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR TCA 72 bp | TTTGCAGAAACTCCTGTGAAGAAATTCCTTCTGGTATaGAAAGACTCTGTCGGTGATGTCAGCTACTCTTTA | + |
Preference number: 3 (lower is better) Translates to: FAETPVKKFLLV*KDSVGDVSYSL Trigger: TAAAGAGTAGCTGACATCACCGACAGAGTCTTTTCATACCAGAAGGAATTTCTTCACAGGAGTTTCTGCAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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CDS-3UTR GCA 90 bp | CAGATGGCCAGGCTGTGCTTTCAGTCCACTGCATTCTCATTCCCAAGCGGCCTCCGGGCCAGCTCCCGTTaGTTCTCCTCCCGGGCGTCA | + |
Preference number: 4 (lower is better) Translates to: QMARLCFQSTAFSFPSGLRASSR*FSSRAS Trigger: TGACGCCCGGGAGGAGAAGCAACGGGAGCTGGCCCG...GAGGCCGCTTGGGAATGAGAATGCAGTGGACTGAAAGCACAGCCTGGCCATCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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CDS-3UTR GCA 90 bp | ACTGTGTGCTCTCCTTGGACTTGGAAGCTGCAGGCTGCCAGCTTCCTACCCCTACGGGCCAGCTCCCGTTaGTTCTCCTCCCGGGCGTCA | + |
Preference number: 4 (lower is better) Translates to: TVCSPWTWKLQAASFLPLRASSR*FSSRAS Trigger: TGACGCCCGGGAGGAGAAGCAACGGGAGCTGGCCCG...TAGGGGTAGGAAGCTGGCAGCCTGCAGCTTCCAAGTCCAAGGAGAGCACACAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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CDS-3UTR CCA 90 bp | GACCAGTGGACCAGCAGGGTAGGGGTCTCTCCTGCTGCATCCCACCGGGCCCAGGTCAAGAGCTACCAGTaGCTTCTCATCAGGGCTCTG | + |
Preference number: 4 (lower is better) Translates to: DQWTSRVGVSPAASHRAQVKSYQ*LLIRAL Trigger: CAGAGCCCTGATGAGAAGCCACTGGTAGCTCTTGAC...CTGGGCCCGGTGGGATGCAGCAGGAGAGACCCCTACCCTGCTGGTCCACTGGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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CDS-3UTR TCA 90 bp | CCTGGCTGGGTAGCAGCCGCAGCCAAGGGTGGGGGAGTGTTAAGGCAGTATCTAGTGGAGGAAGTGGCCTaGCAACACATGCAGGTGGGG | + |
Preference number: 4 (lower is better) Translates to: PGWVAAAAKGGGVLRQYLVEEVA*QHMQVG Trigger: CCCCACCTGCATGTGTTGTCAGGCCACTTCCTCCAC...TAGATACTGCCTTAACACTCCCCCACCCTTGGCTGCGGCTGCTACCCAGCCAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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CDS-3UTR GCA 90 bp | GAGCTACAGCCTCAGCTTTCCTCCCTCAGACCAGACCAGCAGCAGAAGCAACAGGGCTGCATCTCCGAGTaGGCGGTGGGCACCTGGAAC | + |
Preference number: 4 (lower is better) Translates to: ELQPQLSSLRPDQQQKQQGCISE*AVGTWN Trigger: GTTCCAGGTGCCCACCGCGCACTCGGAGATGCAGCC...CTGTTGCTTCTGCTGCTGGTCTGGTCTGAGGGAGGAAAGCTGAGGCTGTAGCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108052.10 |
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CDS-3UTR GCA 90 bp | GAATCCAGAGGGTGGAAATGCTGGCATGTGGGGCGCCTGAAGGAGAGACACTCTGCTGGATCCAGCGGCTaGATCTCCGAGTGCGCGGTG | + |
Preference number: 4 (lower is better) Translates to: ESRGWKCWHVGRLKERHSAGSSG*ISECAV Trigger: CACCGCGCACTCGGAGATGCAGCCGCTGGATCCAGC...AGAGTGTCTCTCCTTCAGGCGCCCCACATGCCAGCATTTCCACCCTCTGGATTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108052.10 |
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CDS-3UTR TCA 90 bp | TTGCTTAGGAGCTCAGGGAGAATGCCGAGGCTGGGACCAGAACCCAGGTTCCAGGTCACAGTCTCGGTCTaGGATAGAGGCTGCGGCTGG | + |
Preference number: 4 (lower is better) Translates to: LLRSSGRMPRLGPEPRFQVTVSV*DRGCGW Trigger: CCAGCCGCAGCCTCTATCTCAGACCGAGACTGTGAC...CTGGAACCTGGGTTCTGGTCCCAGCCTCGGCATTCTCCCTGAGCTCCTAAGCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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CDS-3UTR GCA 90 bp | CCCTTGGCTCTCAATCCCACAGGAAGTCAGAGGCAAAGGCAGCAGTCTAAAGAGCGGGCCAGCTCCCGTTaGTTCTCCTCCCGGGCGTCA | + |
Preference number: 4 (lower is better) Translates to: PLALNPTGSQRQRQQSKERASSR*FSSRAS Trigger: TGACGCCCGGGAGGAGAAGCAACGGGAGCTGGCCCG...CTCTTTAGACTGCTGCCTTTGCCTCTGACTTCCTGTGGGATTGAGAGCCAAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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CDS-3UTR CCA 90 bp | CAGATGGCCAGGCTGTGCTTTCAGTCCACTGCATTCTCATTCCCAAGCGGCCTCGCTGCGGCTGGATCCTaGAACCGGTCGATCTCCTCC | + |
Preference number: 4 (lower is better) Translates to: QMARLCFQSTAFSFPSGLAAAGS*NRSISS Trigger: GGAGGAGATCGACCGGTTCCAGGATCCAGCCGCAGC...GAGGCCGCTTGGGAATGAGAATGCAGTGGACTGAAAGCACAGCCTGGCCATCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 |
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CDS-3UTR CCA 90 bp | AGAGCCACCATCTCACTGAGCTACAGCCTCAGCTTTCCTCCCTCAGACCAGACCGCTGCGGCTGGATCCTaGAACCGGTCGATCTCCTCC | + |
Preference number: 4 (lower is better) Translates to: RATISLSYSLSFPPSDQTAAAGS*NRSISS Trigger: GGAGGAGATCGACCGGTTCCAGGATCCAGCCGCAGC...GGTCTGGTCTGAGGGAGGAAAGCTGAGGCTGTAGCTCAGTGAGATGGTGGCTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 |
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3UTR CAA 72 bp | CTTCCAGGCAGGGAAGGAGGGAACTGTGTGCTCTCCTaGGACTTGGAAGCTGCAGGCTGCCAGCTTCCTACC | + |
Preference number: 4 (lower is better) Translates to: LPGREGGNCVLS*DLEAAGCQLPT Trigger: GGTAGGAAGCTGGCAGCCTGCAGCTTCCAAGTCCAAGGAGAGCACACAGTTCCCTCCTTCCCTGCCTGGAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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CDS-3UTR TCA 90 bp | ACTGTGTGCTCTCCTTGGACTTGGAAGCTGCAGGCTGCCAGCTTCCTACCCCTAGTCACAGTCTCGGTCTaGGATAGAGGCTGCGGCTGG | + |
Preference number: 4 (lower is better) Translates to: TVCSPWTWKLQAASFLPLVTVSV*DRGCGW Trigger: CCAGCCGCAGCCTCTATCTCAGACCGAGACTGTGAC...TAGGGGTAGGAAGCTGGCAGCCTGCAGCTTCCAAGTCCAAGGAGAGCACACAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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CDS-3UTR TCA 90 bp | AGAGCCACCATCTCACTGAGCTACAGCCTCAGCTTTCCTCCCTCAGACCAGACCTCTTGGGTTGCTGGTTaGCAGGGCTGCCCATGCTGC | + |
Preference number: 4 (lower is better) Translates to: RATISLSYSLSFPPSDQTSWVAG*QGCPCC Trigger: GCAGCATGGGCAGCCCTGTCAACCAGCAACCCAAGA...GGTCTGGTCTGAGGGAGGAAAGCTGAGGCTGTAGCTCAGTGAGATGGTGGCTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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CDS-3UTR TCA 90 bp | CAGATGGCCAGGCTGTGCTTTCAGTCCACTGCATTCTCATTCCCAAGCGGCCTCTCTTGGGTTGCTGGTTaGCAGGGCTGCCCATGCTGC | + |
Preference number: 4 (lower is better) Translates to: QMARLCFQSTAFSFPSGLSWVAG*QGCPCC Trigger: GCAGCATGGGCAGCCCTGTCAACCAGCAACCCAAGA...GAGGCCGCTTGGGAATGAGAATGCAGTGGACTGAAAGCACAGCCTGGCCATCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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CDS-3UTR GCA 90 bp | GAGCTACAGCCTCAGCTTTCCTCCCTCAGACCAGACCAGCAGCAGAAGCAACAGCAGGGCTGCCCATGCTaGCGTTCTTCAGGGAACCCT | + |
Preference number: 4 (lower is better) Translates to: ELQPQLSSLRPDQQQKQQQGCPC*RSSGNP Trigger: AGGGTTCCCTGAAGAACGGCAGCATGGGCAGCCCTG...CTGTTGCTTCTGCTGCTGGTCTGGTCTGAGGGAGGAAAGCTGAGGCTGTAGCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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CDS-3UTR CCA 90 bp | GACCAGTGGACCAGCAGGGTAGGGGTCTCTCCTGCTGCATCCCACCGGGCCCAGTGGATGTTCAAATCTTaGTTGATCTCGGCAGAGGAG | + |
Preference number: 4 (lower is better) Translates to: DQWTSRVGVSPAASHRAQWMFKS*LISAEE Trigger: CTCCTCTGCCGAGATCAACCAAGATTTGAACATCCA...CTGGGCCCGGTGGGATGCAGCAGGAGAGACCCCTACCCTGCTGGTCCACTGGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108050.2 |
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CDS-3UTR CCA 90 bp | TTGCTTAGGAGCTCAGGGAGAATGCCGAGGCTGGGACCAGAACCCAGGTTCCAGGAATGTGGCAGGCGGTaGAGGAAGTGGCCTGACAAC | + |
Preference number: 4 (lower is better) Translates to: LLRSSGRMPRLGPEPRFQECGRR*RKWPDN Trigger: GTTGTCAGGCCACTTCCTCCACCGCCTGCCACATTC...CTGGAACCTGGGTTCTGGTCCCAGCCTCGGCATTCTCCCTGAGCTCCTAAGCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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CDS-3UTR CCA 90 bp | CCCTTGGCTCTCAATCCCACAGGAAGTCAGAGGCAAAGGCAGCAGTCTAAAGAGTCTCCGAGTGCGCGGTaGGCACCTGGAACCGGTCGA | + |
Preference number: 4 (lower is better) Translates to: PLALNPTGSQRQRQQSKESPSAR*APGTGR Trigger: TCGACCGGTTCCAGGTGCCCACCGCGCACTCGGAGA...CTCTTTAGACTGCTGCCTTTGCCTCTGACTTCCTGTGGGATTGAGAGCCAAGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108052.10 |
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CDS-3UTR TCA 90 bp | CTGCTTGCACTTGTCTTCAGCCATGGGAGAGCCACCATCTCACTGAGCTACAGCGTGGAGGAAGTGGCCTaGCAACACATGCAGGTGGGG | + |
Preference number: 4 (lower is better) Translates to: LLALVFSHGRATISLSYSVEEVA*QHMQVG Trigger: CCCCACCTGCATGTGTTGTCAGGCCACTTCCTCCAC...GCTGTAGCTCAGTGAGATGGTGGCTCTCCCATGGCTGAAGACAAGTGCAAGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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CDS-3UTR GCA 90 bp | GAAGAAACCTGGCTGGGTAGCAGCCGCAGCCAAGGGTGGGGGAGTGTTAAGGCATTGTTCTTCTTGGGTTaGTGGTTGACAGGGCTGCCC | + |
Preference number: 4 (lower is better) Translates to: EETWLGSSRSQGWGSVKALFFLG*WLTGLP Trigger: GGGCAGCCCTGTCAACCAGCAACCCAAGAAGAACAA...TGCCTTAACACTCCCCCACCCTTGGCTGCGGCTGCTACCCAGCCAGGTTTCTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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CDS-3UTR GCA 90 bp | CCCGGGGCTGGAGACAGACCCGGTTTTGGTTTCTCCGGCTCCTTGAACACACAGTGGCCTGACAACACATaGAGGTGGGGTTCACAGACT | + |
Preference number: 4 (lower is better) Translates to: PGAGDRPGFGFSGSLNTQWPDNT*RWGSQT Trigger: AGTCTGTGAACCCCACCTGCATGTGTTGTCAGGCCA...CTGTGTGTTCAAGGAGCCGGAGAAACCAAAACCGGGTCTGTCTCCAGCCCCGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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CDS-3UTR CCA 90 bp | AGAGCCACCATCTCACTGAGCTACAGCCTCAGCTTTCCTCCCTCAGACCAGACCAGGCGGTGGAGGAAGTaGCCTGACAACACATGCAGG | + |
Preference number: 4 (lower is better) Translates to: RATISLSYSLSFPPSDQTRRWRK*PDNTCR Trigger: CCTGCATGTGTTGTCAGGCCACTTCCTCCACCGCCT...GGTCTGGTCTGAGGGAGGAAAGCTGAGGCTGTAGCTCAGTGAGATGGTGGCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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CDS-3UTR CCA 90 bp | GAATCCAGAGGGTGGAAATGCTGGCATGTGGGGCGCCTGAAGGAGAGACACTCTAGGCGGTGGAGGAAGTaGCCTGACAACACATGCAGG | + |
Preference number: 4 (lower is better) Translates to: ESRGWKCWHVGRLKERHSRRWRK*PDNTCR Trigger: CCTGCATGTGTTGTCAGGCCACTTCCTCCACCGCCT...AGAGTGTCTCTCCTTCAGGCGCCCCACATGCCAGCATTTCCACCCTCTGGATTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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CDS-3UTR CCA 90 bp | ACTGTGTGCTCTCCTTGGACTTGGAAGCTGCAGGCTGCCAGCTTCCTACCCCTAGAATGTGGCAGGCGGTaGAGGAAGTGGCCTGACAAC | + |
Preference number: 4 (lower is better) Translates to: TVCSPWTWKLQAASFLPLECGRR*RKWPDN Trigger: GTTGTCAGGCCACTTCCTCCACCGCCTGCCACATTC...TAGGGGTAGGAAGCTGGCAGCCTGCAGCTTCCAAGTCCAAGGAGAGCACACAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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CDS-3UTR TCA 90 bp | CTTGGACTTGGAAGCTGCAGGCTGCCAGCTTCCTACCCCTACCCGCTATGTATAGCCTCGTCCGGGCCATaGCGTTGTTCTTCTTGGGTT | + |
Preference number: 4 (lower is better) Translates to: LGLGSCRLPASYPYPLCIASSGP*RCSSWV Trigger: AACCCAAGAAGAACAACGTCATGGCCCGGACGAGGC...TATACATAGCGGGTAGGGGTAGGAAGCTGGCAGCCTGCAGCTTCCAAGTCCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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CDS-3UTR CCA 90 bp | TTGCTTAGGAGCTCAGGGAGAATGCCGAGGCTGGGACCAGAACCCAGGTTCCAGTTCTTCTTGGGTTGCTaGTTGACAGGGCTGCCCATG | + |
Preference number: 4 (lower is better) Translates to: LLRSSGRMPRLGPEPRFQFFLGC*LTGLPM Trigger: CATGGGCAGCCCTGTCAACCAGCAACCCAAGAAGAA...CTGGAACCTGGGTTCTGGTCCCAGCCTCGGCATTCTCCCTGAGCTCCTAAGCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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CDS-3UTR CCA 90 bp | CTCTCTCTGCTTGCACTTGTCTTCAGCCATGGGAGAGCCACCATCTCACTGAGCGAATGTGGCAGGCGGTaGAGGAAGTGGCCTGACAAC | + |
Preference number: 4 (lower is better) Translates to: LSLLALVFSHGRATISLSECGRR*RKWPDN Trigger: GTTGTCAGGCCACTTCCTCCACCGCCTGCCACATTC...GCTCAGTGAGATGGTGGCTCTCCCATGGCTGAAGACAAGTGCAAGCAGAGAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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CDS-3UTR TCA 90 bp | CTCACTGATTTCCCAGGCCACAGCCATTTCCTCATCTCGGACACCAATCTGGTTGTCACAGTCTCGGTCTaGGATAGAGGCTGCGGCTGG | + |
Preference number: 4 (lower is better) Translates to: LTDFPGHSHFLISDTNLVVTVSV*DRGCGW Trigger: CCAGCCGCAGCCTCTATCTCAGACCGAGACTGTGAC...AACCAGATTGGTGTCCGAGATGAGGAAATGGCTGTGGCCTGGGAAATCAGTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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CDS-3UTR TCA 90 bp | CCCTTGGCTCTCAATCCCACAGGAAGTCAGAGGCAAAGGCAGCAGTCTAAAGAGGCCTCGTCCGGGCCATaGCGTTGTTCTTCTTGGGTT | + |
Preference number: 4 (lower is better) Translates to: PLALNPTGSQRQRQQSKEASSGP*RCSSWV Trigger: AACCCAAGAAGAACAACGTCATGGCCCGGACGAGGC...CTCTTTAGACTGCTGCCTTTGCCTCTGACTTCCTGTGGGATTGAGAGCCAAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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CDS-3UTR GCA 90 bp | CAGATGGCCAGGCTGTGCTTTCAGTCCACTGCATTCTCATTCCCAAGCGGCCTCTTGTTCTTCTTGGGTTaGTGGTTGACAGGGCTGCCC | + |
Preference number: 4 (lower is better) Translates to: QMARLCFQSTAFSFPSGLLFFLG*WLTGLP Trigger: GGGCAGCCCTGTCAACCAGCAACCCAAGAAGAACAA...GAGGCCGCTTGGGAATGAGAATGCAGTGGACTGAAAGCACAGCCTGGCCATCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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CDS-3UTR GCA 90 bp | CCAGATGGCCAGGCTGTGCTTTCAGTCCACTGCATTCTCATTCCCAAGCGGCCTTGGCCTGACAACACATaGAGGTGGGGTTCACAGACT | + |
Preference number: 4 (lower is better) Translates to: PDGQAVLSVHCILIPKRPWPDNT*RWGSQT Trigger: AGTCTGTGAACCCCACCTGCATGTGTTGTCAGGCCA...AGGCCGCTTGGGAATGAGAATGCAGTGGACTGAAAGCACAGCCTGGCCATCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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CDS-3UTR CCA 90 bp | CAGATGGCCAGGCTGTGCTTTCAGTCCACTGCATTCTCATTCCCAAGCGGCCTCTTCTTCTTGGGTTGCTaGTTGACAGGGCTGCCCATG | + |
Preference number: 4 (lower is better) Translates to: QMARLCFQSTAFSFPSGLFFLGC*LTGLPM Trigger: CATGGGCAGCCCTGTCAACCAGCAACCCAAGAAGAA...GAGGCCGCTTGGGAATGAGAATGCAGTGGACTGAAAGCACAGCCTGGCCATCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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CDS-3UTR CCA 90 bp | GAATCCAGAGGGTGGAAATGCTGGCATGTGGGGCGCCTGAAGGAGAGACACTCTGTCAAGAGCTACCAGTaGCTTCTCATCAGGGCTCTG | + |
Preference number: 4 (lower is better) Translates to: ESRGWKCWHVGRLKERHSVKSYQ*LLIRAL Trigger: CAGAGCCCTGATGAGAAGCCACTGGTAGCTCTTGAC...AGAGTGTCTCTCCTTCAGGCGCCCCACATGCCAGCATTTCCACCCTCTGGATTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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CDS-3UTR CCA 90 bp | CTGTGGCCCCTGCAGATGCTTTCTCTGGCTTGCCTCCCTTGGCATTTTCTTATCAGGCGGTGGAGGAAGTaGCCTGACAACACATGCAGG | + |
Preference number: 4 (lower is better) Translates to: LWPLQMLSLACLPWHFLIRRWRK*PDNTCR Trigger: CCTGCATGTGTTGTCAGGCCACTTCCTCCACCGCCT...GATAAGAAAATGCCAAGGGAGGCAAGCCAGAGAAAGCATCTGCAGGGGCCACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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CDS-3UTR GCA 90 bp | AGAACAGGTCATACCATCCCCAAACCTGGCTTCTCTCTAAGGCCCATCTTACCTCAGGGCTGCCCATGCTaGCGTTCTTCAGGGAACCCT | + |
Preference number: 4 (lower is better) Translates to: RTGHTIPKPGFSLRPILPQGCPC*RSSGNP Trigger: AGGGTTCCCTGAAGAACGGCAGCATGGGCAGCCCTG...AGGTAAGATGGGCCTTAGAGAGAAGCCAGGTTTGGGGATGGTATGACCTGTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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CDS-3UTR GCA 90 bp | CGGCCTCTCACTGATTTCCCAGGCCACAGCCATTTCCTCATCTCGGACACCAATTTGTTCTTCTTGGGTTaGTGGTTGACAGGGCTGCCC | + |
Preference number: 4 (lower is better) Translates to: RPLTDFPGHSHFLISDTNLFFLG*WLTGLP Trigger: GGGCAGCCCTGTCAACCAGCAACCCAAGAAGAACAA...ATTGGTGTCCGAGATGAGGAAATGGCTGTGGCCTGGGAAATCAGTGAGAGGCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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CDS-3UTR GCA 90 bp | CTCTCTCTGCTTGCACTTGTCTTCAGCCATGGGAGAGCCACCATCTCACTGAGCTGGCCTGACAACACATaGAGGTGGGGTTCACAGACT | + |
Preference number: 4 (lower is better) Translates to: LSLLALVFSHGRATISLSWPDNT*RWGSQT Trigger: AGTCTGTGAACCCCACCTGCATGTGTTGTCAGGCCA...GCTCAGTGAGATGGTGGCTCTCCCATGGCTGAAGACAAGTGCAAGCAGAGAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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CDS-3UTR CCA 90 bp | CGGCCTCTCACTGATTTCCCAGGCCACAGCCATTTCCTCATCTCGGACACCAATTTCTTCTTGGGTTGCTaGTTGACAGGGCTGCCCATG | + |
Preference number: 4 (lower is better) Translates to: RPLTDFPGHSHFLISDTNFFLGC*LTGLPM Trigger: CATGGGCAGCCCTGTCAACCAGCAACCCAAGAAGAA...ATTGGTGTCCGAGATGAGGAAATGGCTGTGGCCTGGGAAATCAGTGAGAGGCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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CDS-3UTR CCA 90 bp | CCCGGGGCTGGAGACAGACCCGGTTTTGGTTTCTCCGGCTCCTTGAACACACAGTGGATGTTCAAATCTTaGTTGATCTGCTCGGCAGAG | + |
Preference number: 4 (lower is better) Translates to: PGAGDRPGFGFSGSLNTQWMFKS*LICSAE Trigger: CTCTGCCGAGCAGATCAACCAAGATTTGAACATCCA...CTGTGTGTTCAAGGAGCCGGAGAAACCAAAACCGGGTCTGTCTCCAGCCCCGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108049.9 ENSMUST00000108052.10 |
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CDS-3UTR CCA 90 bp | CCACTTGGCTCACTGTATTTCCTTAAGCTTGCTCTTGAAGAGCCTTTCTGGAAGTGCGCGGTGGGCACCTaGAACCGGTCGATCTCCTCC | + |
Preference number: 4 (lower is better) Translates to: PLGSLYFLKLALEEPFWKCAVGT*NRSISS Trigger: GGAGGAGATCGACCGGTTCCAGGTGCCCACCGCGCA...CTTCCAGAAAGGCTCTTCAAGAGCAAGCTTAAGGAAATACAGTGAGCCAAGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108052.10 |
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CDS-3UTR TCA 90 bp | GAGCTACAGCCTCAGCTTTCCTCCCTCAGACCAGACCAGCAGCAGAAGCAACAGTGTTCAAATCTTGGTTaGTCTGCTCGGCAGAGGAGT | + |
Preference number: 4 (lower is better) Translates to: ELQPQLSSLRPDQQQKQQCSNLG*SARQRS Trigger: ACTCCTCTGCCGAGCAGATCAACCAAGATTTGAACA...CTGTTGCTTCTGCTGCTGGTCTGGTCTGAGGGAGGAAAGCTGAGGCTGTAGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108049.9 ENSMUST00000108052.10 |
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CDS-3UTR CCA 90 bp | CTCACTGATTTCCCAGGCCACAGCCATTTCCTCATCTCGGACACCAATCTGGTTGTCAAGAGCTACCAGTaGCTTCTCATCAGGGCTCTG | + |
Preference number: 4 (lower is better) Translates to: LTDFPGHSHFLISDTNLVVKSYQ*LLIRAL Trigger: CAGAGCCCTGATGAGAAGCCACTGGTAGCTCTTGAC...AACCAGATTGGTGTCCGAGATGAGGAAATGGCTGTGGCCTGGGAAATCAGTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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CDS-3UTR TCA 90 bp | CCACTTGGCTCACTGTATTTCCTTAAGCTTGCTCTTGAAGAGCCTTTCTGGAAGGCCTCGTCCGGGCCATaGCGTTGTTCTTCTTGGGTT | + |
Preference number: 4 (lower is better) Translates to: PLGSLYFLKLALEEPFWKASSGP*RCSSWV Trigger: AACCCAAGAAGAACAACGTCATGGCCCGGACGAGGC...CTTCCAGAAAGGCTCTTCAAGAGCAAGCTTAAGGAAATACAGTGAGCCAAGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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CDS-3UTR CCA 90 bp | CCAGATGGCCAGGCTGTGCTTTCAGTCCACTGCATTCTCATTCCCAAGCGGCCTCCATCTTTCAGCAGCTaGATGTTCAAATCTTGGTTG | + |
Preference number: 4 (lower is better) Translates to: PDGQAVLSVHCILIPKRPPSFSS*MFKSWL Trigger: CAACCAAGATTTGAACATCCAGCTGCTGAAAGATGG...AGGCCGCTTGGGAATGAGAATGCAGTGGACTGAAAGCACAGCCTGGCCATCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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CDS-3UTR CCA 90 bp | GAGCTACAGCCTCAGCTTTCCTCCCTCAGACCAGACCAGCAGCAGAAGCAACAGCCATCTTTCAGCAGCTaGATGTTCAAATCTTGGTTG | + |
Preference number: 4 (lower is better) Translates to: ELQPQLSSLRPDQQQKQQPSFSS*MFKSWL Trigger: CAACCAAGATTTGAACATCCAGCTGCTGAAAGATGG...CTGTTGCTTCTGCTGCTGGTCTGGTCTGAGGGAGGAAAGCTGAGGCTGTAGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR CAA 72 bp | CATGGGCCTGTGGCCCCTGCAGATGCTTTCTCTGGCTaGCCTCCCTTGGCATTTTCTTATCTAATTAGGATC | + |
Preference number: 4 (lower is better) Translates to: HGPVAPADAFSG*PPLAFSYLIRI Trigger: GATCCTAATTAGATAAGAAAATGCCAAGGGAGGCAAGCCAGAGAAAGCATCTGCAGGGGCCACAGGCCCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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CDS-3UTR TCA 90 bp | TCCTACCCCTACCCGCTATGTATATACCACCTAATGCCCTTGCCTGCTTCGGAATGTTCAAATCTTGGTTaGTCTGCTCGGCAGAGGAGT | + |
Preference number: 4 (lower is better) Translates to: SYPYPLCIYHLMPLPASECSNLG*SARQRS Trigger: ACTCCTCTGCCGAGCAGATCAACCAAGATTTGAACA...TTCCGAAGCAGGCAAGGGCATTAGGTGGTATATACATAGCGGGTAGGGGTAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108049.9 ENSMUST00000108052.10 |
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CDS-3UTR CCA 90 bp | CCCTTGGCTCTCAATCCCACAGGAAGTCAGAGGCAAAGGCAGCAGTCTAAAGAGTGGATGTTCAAATCTTaGTTGATCTGCTCGGCAGAG | + |
Preference number: 4 (lower is better) Translates to: PLALNPTGSQRQRQQSKEWMFKS*LICSAE Trigger: CTCTGCCGAGCAGATCAACCAAGATTTGAACATCCA...CTCTTTAGACTGCTGCCTTTGCCTCTGACTTCCTGTGGGATTGAGAGCCAAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108049.9 ENSMUST00000108052.10 |
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3UTR CAA 72 bp | AGCCACTTGGCTCACTGTATTTCCTTAAGCTTGCTCTaGAAGAGCCTTTCTGGAAGCCTGGCTCCTGGACTT | + |
Preference number: 4 (lower is better) Translates to: SHLAHCISLSLL*KSLSGSLAPGL Trigger: AAGTCCAGGAGCCAGGCTTCCAGAAAGGCTCTTCAAGAGCAAGCTTAAGGAAATACAGTGAGCCAAGTGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR CAA 72 bp | TCATACAGCCACTTGGCTCACTGTATTTCCTTAAGCTaGCTCTTGAAGAGCCTTTCTGGAAGCCTGGCTCCT | + |
Preference number: 4 (lower is better) Translates to: SYSHLAHCISLS*LLKSLSGSLAP Trigger: AGGAGCCAGGCTTCCAGAAAGGCTCTTCAAGAGCAAGCTTAAGGAAATACAGTGAGCCAAGTGGCTGTATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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CDS-3UTR CCA 90 bp | CTCACTGATTTCCCAGGCCACAGCCATTTCCTCATCTCGGACACCAATCTGGTTCCATCTTTCAGCAGCTaGATGTTCAAATCTTGGTTG | + |
Preference number: 4 (lower is better) Translates to: LTDFPGHSHFLISDTNLVPSFSS*MFKSWL Trigger: CAACCAAGATTTGAACATCCAGCTGCTGAAAGATGG...AACCAGATTGGTGTCCGAGATGAGGAAATGGCTGTGGCCTGGGAAATCAGTGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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3UTR CAA 72 bp | CATACCATACCATACCATACCATATCATACAGCCACTaGGCTCACTGTATTTCCTTAAGCTTGCTCTTGAAG | + |
Preference number: 4 (lower is better) Translates to: HTIPYHTISYSH*AHCISLSLLLK Trigger: CTTCAAGAGCAAGCTTAAGGAAATACAGTGAGCCAAGTGGCTGTATGATATGGTATGGTATGGTATGGTATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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CDS-3UTR CAA 90 bp | GAAGAAACCTGGCTGGGTAGCAGCCGCAGCCAAGGGTGGGGGAGTGTTAAGGCACCGGGCCAGCTCCCGTaGCTTCTCCTCCCGGGCGTC | + |
Preference number: 5 (lower is better) Translates to: EETWLGSSRSQGWGSVKAPGQLP*LLLPGV Trigger: GACGCCCGGGAGGAGAAGCAACGGGAGCTGGCCCGG...TGCCTTAACACTCCCCCACCCTTGGCTGCGGCTGCTACCCAGCCAGGTTTCTTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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CDS TCA 90 bp | GGCCAGCTCCCGTTGCTTCTCCTCCCGGGCGTCACAGTCTCGGTCTaGGATAGAGGCTGCGGCTGGATCCAGCGGCTGCATCTCCGAGTG | + |
Preference number: 5 (lower is better) Translates to: GQLPLLLLPGVTVSV*DRGCGWIQRLHLRV Trigger: CACTCGGAGATGCAGCCGCTGGATCCAGCCGCAGCCTCTATCTCAGACCGAGACTGTGACGCCCGGGAGGAGAAGCAACGGGAGCTGGCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108052.10 |
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CDS TCA 90 bp | GGCCAGCTCCCGTTGCTTCTCCTCCCGGGCGTCACAGTCTCGGTCTaGGATAGAGGCTGCGGCTGGATCCTGGAACCGGTCGATCTCCTC | + |
Preference number: 5 (lower is better) Translates to: GQLPLLLLPGVTVSV*DRGCGWILEPVDLL Trigger: GAGGAGATCGACCGGTTCCAGGATCCAGCCGCAGCCTCTATCTCAGACCGAGACTGTGACGCCCGGGAGGAGAAGCAACGGGAGCTGGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 |
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CDS GCA 90 bp | TCACAGTCTCGGTCTGAGATAGAGGCTGCGGCTGGATCCAGCGGCTaGATCTCCGAGTGCGCGGTGGGCACCTGGAACCGGTCGATCTCC | + |
Preference number: 5 (lower is better) Translates to: SQSRSEIEAAAGSSG*ISECAVGTWNRSIS Trigger: GGAGATCGACCGGTTCCAGGTGCCCACCGCGCACTCGGAGATGCAGCCGCTGGATCCAGCCGCAGCCTCTATCTCAGACCGAGACTGTGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108052.10 |
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CDS-3UTR CAA 90 bp | GAGCTACAGCCTCAGCTTTCCTCCCTCAGACCAGACCAGCAGCAGAAGCAACAGCCGGGCCAGCTCCCGTaGCTTCTCCTCCCGGGCGTC | + |
Preference number: 5 (lower is better) Translates to: ELQPQLSSLRPDQQQKQQPGQLP*LLLPGV Trigger: GACGCCCGGGAGGAGAAGCAACGGGAGCTGGCCCGG...CTGTTGCTTCTGCTGCTGGTCTGGTCTGAGGGAGGAAAGCTGAGGCTGTAGCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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CDS-3UTR CAA 90 bp | GACCAGTGGACCAGCAGGGTAGGGGTCTCTCCTGCTGCATCCCACCGGGCCCAGGTTGTTCTTCTTGGGTaGCTGGTTGACAGGGCTGCC | + |
Preference number: 5 (lower is better) Translates to: DQWTSRVGVSPAASHRAQVVLLG*LVDRAA Trigger: GGCAGCCCTGTCAACCAGCAACCCAAGAAGAACAAC...CTGGGCCCGGTGGGATGCAGCAGGAGAGACCCCTACCCTGCTGGTCCACTGGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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CDS GCA 90 bp | GGGACGACCAGCCTCGTCCGGGCCATGACGTTGTTCTTCTTGGGTTaGTGGTTGACAGGGCTGCCCATGCTGCCGTTCTTCAGGGAACCC | + |
Preference number: 5 (lower is better) Translates to: GTTSLVRAMTLFFLG*WLTGLPMLPFFREP Trigger: GGGTTCCCTGAAGAACGGCAGCATGGGCAGCCCTGTCAACCAGCAACCCAAGAAGAACAACGTCATGGCCCGGACGAGGCTGGTCGTCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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CDS CCA 90 bp | ACGACCAGCCTCGTCCGGGCCATGACGTTGTTCTTCTTGGGTTGCTaGTTGACAGGGCTGCCCATGCTGCCGTTCTTCAGGGAACCCTTC | + |
Preference number: 5 (lower is better) Translates to: TTSLVRAMTLFFLGC*LTGLPMLPFFREPF Trigger: GAAGGGTTCCCTGAAGAACGGCAGCATGGGCAGCCCTGTCAACCAGCAACCCAAGAAGAACAACGTCATGGCCCGGACGAGGCTGGTCGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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CDS-3UTR CAA 90 bp | GAAGAAACCTGGCTGGGTAGCAGCCGCAGCCAAGGGTGGGGGAGTGTTAAGGCATTCTTGGGTTGCTGGTaGACAGGGCTGCCCATGCTG | + |
Preference number: 5 (lower is better) Translates to: EETWLGSSRSQGWGSVKAFLGCW*TGLPML Trigger: CAGCATGGGCAGCCCTGTCAACCAGCAACCCAAGAA...TGCCTTAACACTCCCCCACCCTTGGCTGCGGCTGCTACCCAGCCAGGTTTCTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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CDS-3UTR CAA 90 bp | GACCAGTGGACCAGCAGGGTAGGGGTCTCTCCTGCTGCATCCCACCGGGCCCAGCTGGATGTTCAAATCTaGGTTGATCTCGGCAGAGGA | + |
Preference number: 5 (lower is better) Translates to: DQWTSRVGVSPAASHRAQLDVQI*VDLGRG Trigger: TCCTCTGCCGAGATCAACCAAGATTTGAACATCCAG...CTGGGCCCGGTGGGATGCAGCAGGAGAGACCCCTACCCTGCTGGTCCACTGGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108050.2 |
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CDS-3UTR CAA 90 bp | CCACTTGGCTCACTGTATTTCCTTAAGCTTGCTCTTGAAGAGCCTTTCTGGAAGCCGGGCCAGCTCCCGTaGCTTCTCCTCCCGGGCGTC | + |
Preference number: 5 (lower is better) Translates to: PLGSLYFLKLALEEPFWKPGQLP*LLLPGV Trigger: GACGCCCGGGAGGAGAAGCAACGGGAGCTGGCCCGG...CTTCCAGAAAGGCTCTTCAAGAGCAAGCTTAAGGAAATACAGTGAGCCAAGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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CDS-3UTR CAA 90 bp | ACTGTGTGCTCTCCTTGGACTTGGAAGCTGCAGGCTGCCAGCTTCCTACCCCTATTCTTGGGTTGCTGGTaGACAGGGCTGCCCATGCTG | + |
Preference number: 5 (lower is better) Translates to: TVCSPWTWKLQAASFLPLFLGCW*TGLPML Trigger: CAGCATGGGCAGCCCTGTCAACCAGCAACCCAAGAA...TAGGGGTAGGAAGCTGGCAGCCTGCAGCTTCCAAGTCCAAGGAGAGCACACAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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CDS-3UTR CAA 90 bp | CTCTCTCTGCTTGCACTTGTCTTCAGCCATGGGAGAGCCACCATCTCACTGAGCGTCCGGGCCATGACGTaGTTCTTCTTGGGTTGCTGG | + |
Preference number: 5 (lower is better) Translates to: LSLLALVFSHGRATISLSVRAMT*FFLGCW Trigger: CCAGCAACCCAAGAAGAACAACGTCATGGCCCGGAC...GCTCAGTGAGATGGTGGCTCTCCCATGGCTGAAGACAAGTGCAAGCAGAGAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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CDS-3UTR CAA 90 bp | CCTGGCTGGGTAGCAGCCGCAGCCAAGGGTGGGGGAGTGTTAAGGCAGTATCTAATGTTCAAATCTTGGTaGATCTGCTCGGCAGAGGAG | + |
Preference number: 5 (lower is better) Translates to: PGWVAAAAKGGGVLRQYLMFKSW*ICSAEE Trigger: CTCCTCTGCCGAGCAGATCAACCAAGATTTGAACAT...TAGATACTGCCTTAACACTCCCCCACCCTTGGCTGCGGCTGCTACCCAGCCAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108049.9 ENSMUST00000108052.10 |
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CDS-3UTR CAA 90 bp | CCTGGCTGGGTAGCAGCCGCAGCCAAGGGTGGGGGAGTGTTAAGGCAGTATCTACTGGATGTTCAAATCTaGGTTGATCTGCTCGGCAGA | + |
Preference number: 5 (lower is better) Translates to: PGWVAAAAKGGGVLRQYLLDVQI*VDLLGR Trigger: TCTGCCGAGCAGATCAACCAAGATTTGAACATCCAG...TAGATACTGCCTTAACACTCCCCCACCCTTGGCTGCGGCTGCTACCCAGCCAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108049.9 ENSMUST00000108052.10 |
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CDS-3UTR CAA 90 bp | CCCTTGGCTCTCAATCCCACAGGAAGTCAGAGGCAAAGGCAGCAGTCTAAAGAGGTTGTTCTTCTTGGGTaGCTGGTTGACAGGGCTGCC | + |
Preference number: 5 (lower is better) Translates to: PLALNPTGSQRQRQQSKEVVLLG*LVDRAA Trigger: GGCAGCCCTGTCAACCAGCAACCCAAGAAGAACAAC...CTCTTTAGACTGCTGCCTTTGCCTCTGACTTCCTGTGGGATTGAGAGCCAAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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CDS-3UTR CAA 90 bp | CTCACTGATTTCCCAGGCCACAGCCATTTCCTCATCTCGGACACCAATCTGGTTGTTGTTCTTCTTGGGTaGCTGGTTGACAGGGCTGCC | + |
Preference number: 5 (lower is better) Translates to: LTDFPGHSHFLISDTNLVVVLLG*LVDRAA Trigger: GGCAGCCCTGTCAACCAGCAACCCAAGAAGAACAAC...AACCAGATTGGTGTCCGAGATGAGGAAATGGCTGTGGCCTGGGAAATCAGTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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CDS-3UTR CAA 90 bp | CTCTCTCTGCTTGCACTTGTCTTCAGCCATGGGAGAGCCACCATCTCACTGAGCATGACGTTGTTCTTCTaGGGTTGCTGGTTGACAGGG | + |
Preference number: 5 (lower is better) Translates to: LSLLALVFSHGRATISLSMTLFF*GCWLTG Trigger: CCCTGTCAACCAGCAACCCAAGAAGAACAACGTCAT...GCTCAGTGAGATGGTGGCTCTCCCATGGCTGAAGACAAGTGCAAGCAGAGAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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CDS-3UTR CAA 90 bp | CCAGATGGCCAGGCTGTGCTTTCAGTCCACTGCATTCTCATTCCCAAGCGGCCTCTGGATGTTCAAATCTaGGTTGATCTGCTCGGCAGA | + |
Preference number: 5 (lower is better) Translates to: PDGQAVLSVHCILIPKRPLDVQI*VDLLGR Trigger: TCTGCCGAGCAGATCAACCAAGATTTGAACATCCAG...AGGCCGCTTGGGAATGAGAATGCAGTGGACTGAAAGCACAGCCTGGCCATCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108049.9 ENSMUST00000108052.10 |
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CDS CCA 90 bp | GGACATGTCAAAGTCATCGTCGCTGTCTGTGTCAAGAGCTACCAGTaGCTTCTCATCAGGGCTCTGGTCCAGCGAGGAGTAGCCTTTATT | + |
Preference number: 5 (lower is better) Translates to: GHVKVIVAVCVKSYQ*LLIRALVQRGVAFI Trigger: AATAAAGGCTACTCCTCGCTGGACCAGAGCCCTGATGAGAAGCCACTGGTAGCTCTTGACACAGACAGCGACGATGACTTTGACATGTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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CDS-3UTR CAA 90 bp | CTGTGGCCCCTGCAGATGCTTTCTCTGGCTTGCCTCCCTTGGCATTTTCTTATCATGACGTTGTTCTTCTaGGGTTGCTGGTTGACAGGG | + |
Preference number: 5 (lower is better) Translates to: LWPLQMLSLACLPWHFLIMTLFF*GCWLTG Trigger: CCCTGTCAACCAGCAACCCAAGAAGAACAACGTCAT...GATAAGAAAATGCCAAGGGAGGCAAGCCAGAGAAAGCATCTGCAGGGGCCACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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CDS-3UTR CAA 90 bp | TCCTACCCCTACCCGCTATGTATATACCACCTAATGCCCTTGCCTGCTTCGGAAATGACGTTGTTCTTCTaGGGTTGCTGGTTGACAGGG | + |
Preference number: 5 (lower is better) Translates to: SYPYPLCIYHLMPLPASEMTLFF*GCWLTG Trigger: CCCTGTCAACCAGCAACCCAAGAAGAACAACGTCAT...TTCCGAAGCAGGCAAGGGCATTAGGTGGTATATACATAGCGGGTAGGGGTAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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CDS-3UTR CAA 90 bp | CCACTTGGCTCACTGTATTTCCTTAAGCTTGCTCTTGAAGAGCCTTTCTGGAAGGTCCGGGCCATGACGTaGTTCTTCTTGGGTTGCTGG | + |
Preference number: 5 (lower is better) Translates to: PLGSLYFLKLALEEPFWKVRAMT*FFLGCW Trigger: CCAGCAACCCAAGAAGAACAACGTCATGGCCCGGAC...CTTCCAGAAAGGCTCTTCAAGAGCAAGCTTAAGGAAATACAGTGAGCCAAGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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CDS-3UTR CAA 90 bp | CCCTTGGCTCTCAATCCCACAGGAAGTCAGAGGCAAAGGCAGCAGTCTAAAGAGATGTTCAAATCTTGGTaGATCTGCTCGGCAGAGGAG | + |
Preference number: 5 (lower is better) Translates to: PLALNPTGSQRQRQQSKEMFKSW*ICSAEE Trigger: CTCCTCTGCCGAGCAGATCAACCAAGATTTGAACAT...CTCTTTAGACTGCTGCCTTTGCCTCTGACTTCCTGTGGGATTGAGAGCCAAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108049.9 ENSMUST00000108052.10 |
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CDS GCA 72 bp | GAGGCTGCGGCTGGATCCAGCGGCTGCATCTCCGAGTaGGCGGTGGGCACCTGGAACCGGTCGATCTCCTCC | + |
Preference number: 6 (lower is better) Translates to: EAAAGSSGCISE*AVGTWNRSISS Trigger: GGAGGAGATCGACCGGTTCCAGGTGCCCACCGCGCACTCGGAGATGCAGCCGCTGGATCCAGCCGCAGCCTC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108052.10 |
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CDS GCA 72 bp | CGGTCTGAGATAGAGGCTGCGGCTGGATCCAGCGGCTaGATCTCCGAGTGCGCGGTGGGCACCTGGAACCGG | + |
Preference number: 6 (lower is better) Translates to: RSEIEAAAGSSG*ISECAVGTWNR Trigger: CCGGTTCCAGGTGCCCACCGCGCACTCGGAGATGCAGCCGCTGGATCCAGCCGCAGCCTCTATCTCAGACCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108052.10 |
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CDS TCA 72 bp | CCGTTGCTTCTCCTCCCGGGCGTCACAGTCTCGGTCTaGGATAGAGGCTGCGGCTGGATCCTGGAACCGGTC | + |
Preference number: 6 (lower is better) Translates to: PLLLLPGVTVSV*DRGCGWILEPV Trigger: GACCGGTTCCAGGATCCAGCCGCAGCCTCTATCTCAGACCGAGACTGTGACGCCCGGGAGGAGAAGCAACGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 |
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CDS TCA 72 bp | CCGTTGCTTCTCCTCCCGGGCGTCACAGTCTCGGTCTaGGATAGAGGCTGCGGCTGGATCCAGCGGCTGCAT | + |
Preference number: 6 (lower is better) Translates to: PLLLLPGVTVSV*DRGCGWIQRLH Trigger: ATGCAGCCGCTGGATCCAGCCGCAGCCTCTATCTCAGACCGAGACTGTGACGCCCGGGAGGAGAAGCAACGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108052.10 |
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CDS CAA 72 bp | ACGACCAGCCTCGTCCGGGCCATGACGTTGTTCTTCTaGGGTTGCTGGTTGACAGGGCTGCCCATGCTGCCG | + |
Preference number: 6 (lower is better) Translates to: TTSLVRAMTLFF*GCWLTGLPMLP Trigger: CGGCAGCATGGGCAGCCCTGTCAACCAGCAACCCAAGAAGAACAACGTCATGGCCCGGACGAGGCTGGTCGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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CDS CAA 90 bp | ACCAGCCTCGTCCGGGCCATGACGTTGTTCTTCTTGGGTTGCTGGTaGACAGGGCTGCCCATGCTGCCGTTCTTCAGGGAACCCTTCCGG | + |
Preference number: 6 (lower is better) Translates to: TSLVRAMTLFFLGCW*TGLPMLPFFREPFR Trigger: CCGGAAGGGTTCCCTGAAGAACGGCAGCATGGGCAGCCCTGTCAACCAGCAACCCAAGAAGAACAACGTCATGGCCCGGACGAGGCTGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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CDS CAA 90 bp | AGGGACGACCAGCCTCGTCCGGGCCATGACGTTGTTCTTCTTGGGTaGCTGGTTGACAGGGCTGCCCATGCTGCCGTTCTTCAGGGAACC | + |
Preference number: 6 (lower is better) Translates to: RDDQPRPGHDVVLLG*LVDRAAHAAVLQGT Trigger: GGTTCCCTGAAGAACGGCAGCATGGGCAGCCCTGTCAACCAGCAACCCAAGAAGAACAACGTCATGGCCCGGACGAGGCTGGTCGTCCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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CDS GCA 72 bp | AGCCTCGTCCGGGCCATGACGTTGTTCTTCTTGGGTTaGTGGTTGACAGGGCTGCCCATGCTGCCGTTCTTC | + |
Preference number: 6 (lower is better) Translates to: SLVRAMTLFFLG*WLTGLPMLPFF Trigger: GAAGAACGGCAGCATGGGCAGCCCTGTCAACCAGCAACCCAAGAAGAACAACGTCATGGCCCGGACGAGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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CDS CCA 72 bp | CTCGTCCGGGCCATGACGTTGTTCTTCTTGGGTTGCTaGTTGACAGGGCTGCCCATGCTGCCGTTCTTCAGG | + |
Preference number: 6 (lower is better) Translates to: LVRAMTLFFLGC*LTGLPMLPFFR Trigger: CCTGAAGAACGGCAGCATGGGCAGCCCTGTCAACCAGCAACCCAAGAAGAACAACGTCATGGCCCGGACGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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CDS CAA 90 bp | TTATTAGGGACGACCAGCCTCGTCCGGGCCATGACGTTGTTCTTCTaGGGTTGCTGGTTGACAGGGCTGCCCATGCTGCCGTTCTTCAGG | + |
Preference number: 6 (lower is better) Translates to: LLGTTSLVRAMTLFF*GCWLTGLPMLPFFR Trigger: CCTGAAGAACGGCAGCATGGGCAGCCCTGTCAACCAGCAACCCAAGAAGAACAACGTCATGGCCCGGACGAGGCTGGTCGTCCCTAATAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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CDS CAA 72 bp | GTCCGGGCCATGACGTTGTTCTTCTTGGGTTGCTGGTaGACAGGGCTGCCCATGCTGCCGTTCTTCAGGGAA | + |
Preference number: 6 (lower is better) Translates to: VRAMTLFFLGCW*TGLPMLPFFRE Trigger: TTCCCTGAAGAACGGCAGCATGGGCAGCCCTGTCAACCAGCAACCCAAGAAGAACAACGTCATGGCCCGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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CDS CAA 72 bp | TTATTAGGGACGACCAGCCTCGTCCGGGCCATGACGTaGTTCTTCTTGGGTTGCTGGTTGACAGGGCTGCCC | + |
Preference number: 6 (lower is better) Translates to: LLGTTSLVRAMT*FFLGCWLTGLP Trigger: GGGCAGCCCTGTCAACCAGCAACCCAAGAAGAACAACGTCATGGCCCGGACGAGGCTGGTCGTCCCTAATAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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CDS CCA 72 bp | AAAGTCATCGTCGCTGTCTGTGTCAAGAGCTACCAGTaGCTTCTCATCAGGGCTCTGGTCCAGCGAGGAGTA | + |
Preference number: 6 (lower is better) Translates to: KVIVAVCVKSYQ*LLIRALVQRGV Trigger: TACTCCTCGCTGGACCAGAGCCCTGATGAGAAGCCACTGGTAGCTCTTGACACAGACAGCGACGATGACTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108049.9 ENSMUST00000108050.2 ENSMUST00000108052.10 |
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CDS CAA 72 bp | CCGGTAGCCATCTTTCAGCAGCTGGATGTTCAAATCTaGGTTGATCTGCTCGGCAGAGGAGTAGCCAGAGGA | + |
Preference number: 6 (lower is better) Translates to: PVAIFQQLDVQI*VDLLGRGVARG Trigger: TCCTCTGGCTACTCCTCTGCCGAGCAGATCAACCAAGATTTGAACATCCAGCTGCTGAAAGATGGCTACCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108049.9 ENSMUST00000108052.10 |
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CDS CAA 72 bp | CCGGTAGCCATCTTTCAGCAGCTGGATGTTCAAATCTaGGTTGATCTCGGCAGAGGAGTAGCCAGAGGAAGA | + |
Preference number: 6 (lower is better) Translates to: PVAIFQQLDVQI*VDLGRGVARGR Trigger: TCTTCCTCTGGCTACTCCTCTGCCGAGATCAACCAAGATTTGAACATCCAGCTGCTGAAAGATGGCTACCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108050.2 |