Pregenerated sensors for FAM217A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021414Ensembl transcript IDs: ENSMUST00000021851.8, ENSMUST00000223834.2, ENSMUST00000225242.2
Found 128 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | AGTGAGGAAGGCCTTGACTGTATAAAGTCAGCAGTGACATTCATGAGTTCTACCTTTAGCTGGGTTTTGTaGAATAGATTCACTCACATT | + |
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Preference number: 2 (lower is better) Translates to: SEEGLDCIKSAVTFMSSTFSWVL*NRFTHI Trigger: AATGTGAGTGAATCTATTCCACAAAACCCAGCTAAA...GGTAGAACTCATGAATGTCACTGCTGACTTTATACAGTCAAGGCCTTCCTCACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021851.8 ENSMUST00000225242.2 |
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| 3UTR-3UTR CCA 90 bp | CTGTATAAAGTCAGCAGTGACATTCATGAGTTCTACCCATGTCTTATCAAGGTTTTTAGCTGGGTTTTGTaGAATAGATTCACTCACATT | + |
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Preference number: 2 (lower is better) Translates to: LYKVSSDIHEFYPCLIKVFSWVL*NRFTHI Trigger: AATGTGAGTGAATCTATTCCACAAAACCCAGCTAAA...AACCTTGATAAGACATGGGTAGAACTCATGAATGTCACTGCTGACTTTATACAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021851.8 ENSMUST00000225242.2 |
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| 3UTR-3UTR CAA 90 bp | AGTGAGGAAGGCCTTGACTGTATAAAGTCAGCAGTGACATTCATGAGTTCTACCTATTTTAGCTGGGTTTaGTGGAATAGATTCACTCAC | + |
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Preference number: 3 (lower is better) Translates to: SEEGLDCIKSAVTFMSSTYFSWV*WNRFTH Trigger: GTGAGTGAATCTATTCCACAAAACCCAGCTAAAATA...GGTAGAACTCATGAATGTCACTGCTGACTTTATACAGTCAAGGCCTTCCTCACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021851.8 ENSMUST00000225242.2 |
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| 3UTR-3UTR CAA 90 bp | TTCTACCCATGTCTTATCAAGGTTTTTGTTTCTAATACCTGTGTCTCAATGATGTATTTTAGCTGGGTTTaGTGGAATAGATTCACTCAC | + |
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Preference number: 3 (lower is better) Translates to: FYPCLIKVFVSNTCVSMMYFSWV*WNRFTH Trigger: GTGAGTGAATCTATTCCACAAAACCCAGCTAAAATA...CATCATTGAGACACAGGTATTAGAAACAAAAACCTTGATAAGACATGGGTAGAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021851.8 ENSMUST00000225242.2 |
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| CDS-3UTR TCA 90 bp | GAAGGCCTTGACTGTATAAAGTCAGCAGTGACATTCATGAGTTCTACCCATGTCCGGTGGGAGGCATCTTaGGACCACTCTAGCCATTGG | + |
|
Preference number: 4 (lower is better) Translates to: EGLDCIKSAVTFMSSTHVRWEAS*DHSSHW Trigger: CCAATGGCTAGAGTGGTCTCAAGATGCCTCCCACCG...GACATGGGTAGAACTCATGAATGTCACTGCTGACTTTATACAGTCAAGGCCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021851.8 ENSMUST00000225242.2 |
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| CDS-3UTR TCA 90 bp | GAAGGCCTTGACTGTATAAAGTCAGCAGTGACATTCATGAGTTCTACCCATGTCCTCCTGAGAGATGCTTaGCACATGCAGGCTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: EGLDCIKSAVTFMSSTHVLLRDA*HMQAAA Trigger: AGCAGCAGCCTGCATGTGTCAAGCATCTCTCAGGAG...GACATGGGTAGAACTCATGAATGTCACTGCTGACTTTATACAGTCAAGGCCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021851.8 ENSMUST00000225242.2 |
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| CDS-3UTR GCA 90 bp | GAGGAAGGCCTTGACTGTATAAAGTCAGCAGTGACATTCATGAGTTCTACCCATCATGCAGGCTGCTGCTaGAGCTCTCATTGCTTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: EEGLDCIKSAVTFMSSTHHAGCC*SSHCFF Trigger: GAAAAAGCAATGAGAGCTGCAGCAGCAGCCTGCATG...ATGGGTAGAACTCATGAATGTCACTGCTGACTTTATACAGTCAAGGCCTTCCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021851.8 ENSMUST00000225242.2 |
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| CDS-3UTR GCA 90 bp | GAGGAAGGCCTTGACTGTATAAAGTCAGCAGTGACATTCATGAGTTCTACCCATACACATGCAGGCTGCTaGTGCAGCTCTCATTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: EEGLDCIKSAVTFMSSTHTHAGC*CSSHCF Trigger: AAAGCAATGAGAGCTGCAGCAGCAGCCTGCATGTGT...ATGGGTAGAACTCATGAATGTCACTGCTGACTTTATACAGTCAAGGCCTTCCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021851.8 ENSMUST00000225242.2 |
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| CDS-3UTR CCA 90 bp | GAAGGCCTTGACTGTATAAAGTCAGCAGTGACATTCATGAGTTCTACCCATGTCAGTGCTTTGCAGCCTTaGCCTCTCTCTCTGTATGGT | + |
|
Preference number: 4 (lower is better) Translates to: EGLDCIKSAVTFMSSTHVSALQP*PLSLYG Trigger: ACCATACAGAGAGAGAGGCCAAGGCTGCAAAGCACT...GACATGGGTAGAACTCATGAATGTCACTGCTGACTTTATACAGTCAAGGCCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021851.8 ENSMUST00000225242.2 |
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| CDS-3UTR TCA 90 bp | CTGTATAAAGTCAGCAGTGACATTCATGAGTTCTACCCATGTCTTATCAAGGTTCTCCTGAGAGATGCTTaGCACATGCAGGCTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LYKVSSDIHEFYPCLIKVLLRDA*HMQAAA Trigger: AGCAGCAGCCTGCATGTGTCAAGCATCTCTCAGGAG...AACCTTGATAAGACATGGGTAGAACTCATGAATGTCACTGCTGACTTTATACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021851.8 ENSMUST00000225242.2 |
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| CDS-3UTR TCA 90 bp | GAGGAAGGCCTTGACTGTATAAAGTCAGCAGTGACATTCATGAGTTCTACCCATATAAGTGGTTTACAGTaGAGAGCCTGGGACTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: EEGLDCIKSAVTFMSSTHISGLQ*RAWDCW Trigger: CCAACAGTCCCAGGCTCTTCACTGTAAACCACTTAT...ATGGGTAGAACTCATGAATGTCACTGCTGACTTTATACAGTCAAGGCCTTCCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021851.8 |
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| CDS-3UTR TCA 90 bp | GAGGAAGGCCTTGACTGTATAAAGTCAGCAGTGACATTCATGAGTTCTACCCATCAGACCTGCTGGCATTaGCTGACCAGGATAAAGAAT | + |
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Preference number: 4 (lower is better) Translates to: EEGLDCIKSAVTFMSSTHQTCWH*LTRIKN Trigger: ATTCTTTATCCTGGTCAGTCAATGCCAGCAGGTCTG...ATGGGTAGAACTCATGAATGTCACTGCTGACTTTATACAGTCAAGGCCTTCCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021851.8 |
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| CDS-3UTR CCA 90 bp | CTGTGTCTCAATGATGAACCATATTTTAGCTGGGTTTTGTGGAATAGATTCACTTTGGCCTGCTTCCTCTaGGAAAGGTCTCTCCACGTG | + |
|
Preference number: 4 (lower is better) Translates to: LCLNDEPYFSWVLWNRFTLACFL*ERSLHV Trigger: CACGTGGAGAGACCTTTCCCAGAGGAAGCAGGCCAA...AGTGAATCTATTCCACAAAACCCAGCTAAAATATGGTTCATCATTGAGACACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021851.8 ENSMUST00000225242.2 |
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| CDS-3UTR TCA 90 bp | CTGTGTCTCAATGATGAACCATATTTTAGCTGGGTTTTGTGGAATAGATTCACTGTAGGTCCAGAGTGTTaGAAGGGGCAGGGAGAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LCLNDEPYFSWVLWNRFTVGPEC*KGQGES Trigger: ACTTTCTCCCTGCCCCTTTCAACACTCTGGACCTAC...AGTGAATCTATTCCACAAAACCCAGCTAAAATATGGTTCATCATTGAGACACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021851.8 ENSMUST00000225242.2 |
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| CDS-3UTR GCA 90 bp | GAAGGCCTTGACTGTATAAAGTCAGCAGTGACATTCATGAGTTCTACCCATGTCTACTTTTGCCAGCACTaGTCAAGCTCCATTTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: EGLDCIKSAVTFMSSTHVYFCQH*SSSIWK Trigger: TTTCCAAATGGAGCTTGAGCAGTGCTGGCAAAAGTA...GACATGGGTAGAACTCATGAATGTCACTGCTGACTTTATACAGTCAAGGCCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021851.8 ENSMUST00000225242.2 |
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| CDS-3UTR CCA 90 bp | AAGGTTTTTGTTTCTAATACCTGTGTCTCAATGATGAACCATATTTTAGCTGGGTTGGCCTGCTTCCTCTaGGAAAGGTCTCTCCACGTG | + |
|
Preference number: 4 (lower is better) Translates to: KVFVSNTCVSMMNHILAGLACFL*ERSLHV Trigger: CACGTGGAGAGACCTTTCCCAGAGGAAGCAGGCCAA...CCCAGCTAAAATATGGTTCATCATTGAGACACAGGTATTAGAAACAAAAACCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021851.8 ENSMUST00000225242.2 |
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| CDS-3UTR CCA 90 bp | CTGTATAAAGTCAGCAGTGACATTCATGAGTTCTACCCATGTCTTATCAAGGTTAGTGCTTTGCAGCCTTaGCCTCTCTCTCTGTATGGT | + |
|
Preference number: 4 (lower is better) Translates to: LYKVSSDIHEFYPCLIKVSALQP*PLSLYG Trigger: ACCATACAGAGAGAGAGGCCAAGGCTGCAAAGCACT...AACCTTGATAAGACATGGGTAGAACTCATGAATGTCACTGCTGACTTTATACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021851.8 ENSMUST00000225242.2 |
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| CDS-3UTR CCA 90 bp | GAAGGCCTTGACTGTATAAAGTCAGCAGTGACATTCATGAGTTCTACCCATGTCGGAAACATTTTGTTCTaGCTTGCCAGAGCCAGAATT | + |
|
Preference number: 4 (lower is better) Translates to: EGLDCIKSAVTFMSSTHVGNILF*LARARI Trigger: AATTCTGGCTCTGGCAAGCCAGAACAAAATGTTTCC...GACATGGGTAGAACTCATGAATGTCACTGCTGACTTTATACAGTCAAGGCCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021851.8 ENSMUST00000225242.2 |
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| CDS-3UTR TCA 90 bp | GAGTTCTACCCATGTCTTATCAAGGTTTTTGTTTCTAATACCTGTGTCTCAATGGACTGTTGGCTGCATTaGAGCCAGTTTCCACTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: EFYPCLIKVFVSNTCVSMDCWLH*SQFPLK Trigger: CTTCAGTGGAAACTGGCTTCAATGCAGCCAACAGTC...CATTGAGACACAGGTATTAGAAACAAAAACCTTGATAAGACATGGGTAGAACTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021851.8 |
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| CDS-3UTR TCA 90 bp | CCATGTCTTATCAAGGTTTTTGTTTCTAATACCTGTGTCTCAATGATGAACCATGTAGGTCCAGAGTGTTaGAAGGGGCAGGGAGAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: PCLIKVFVSNTCVSMMNHVGPEC*KGQGES Trigger: ACTTTCTCCCTGCCCCTTTCAACACTCTGGACCTAC...ATGGTTCATCATTGAGACACAGGTATTAGAAACAAAAACCTTGATAAGACATGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021851.8 ENSMUST00000225242.2 |
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| CDS-3UTR TCA 90 bp | AAGGTTTTTGTTTCTAATACCTGTGTCTCAATGATGAACCATATTTTAGCTGGGTTTTTGGTCAGTGGGTaGGCACTTGCCCCTGGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: KVFVSNTCVSMMNHILAGFLVSG*ALAPGY Trigger: ATAGCCAGGGGCAAGTGCTCACCCACTGACCAAAAA...CCCAGCTAAAATATGGTTCATCATTGAGACACAGGTATTAGAAACAAAAACCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000021851.8 ENSMUST00000225242.2 |
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| CDS-3UTR GCA 90 bp | GAGTTCTACCCATGTCTTATCAAGGTTTTTGTTTCTAATACCTGTGTCTCAATGACACATGCAGGCTGCTaGTGCAGCTCTCATTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: EFYPCLIKVFVSNTCVSMTHAGC*CSSHCF Trigger: AAAGCAATGAGAGCTGCAGCAGCAGCCTGCATGTGT...CATTGAGACACAGGTATTAGAAACAAAAACCTTGATAAGACATGGGTAGAACTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021851.8 ENSMUST00000225242.2 |
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| CDS-3UTR GCA 90 bp | TGTATAAAGTCAGCAGTGACATTCATGAGTTCTACCCATGTCTTATCAAGGTTTGATTCTCCTGAGAGATaGTTGACACATGCAGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: CIKSAVTFMSSTHVLSRFDSPER*LTHAGC Trigger: GCAGCCTGCATGTGTCAAGCATCTCTCAGGAGAATC...AAACCTTGATAAGACATGGGTAGAACTCATGAATGTCACTGCTGACTTTATACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021851.8 ENSMUST00000225242.2 |
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| CDS-3UTR CCA 90 bp | GAAGGCCTTGACTGTATAAAGTCAGCAGTGACATTCATGAGTTCTACCCATGTCGGCAAGGGTTTAAACTaGAGTTCTTGGAGTTCTTTA | + |
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Preference number: 4 (lower is better) Translates to: EGLDCIKSAVTFMSSTHVGKGLN*SSWSSL Trigger: TAAAGAACTCCAAGAACTCCAGTTTAAACCCTTGCC...GACATGGGTAGAACTCATGAATGTCACTGCTGACTTTATACAGTCAAGGCCTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021851.8 ENSMUST00000225242.2 |
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| CDS-3UTR CCA 90 bp | CTGTATAAAGTCAGCAGTGACATTCATGAGTTCTACCCATGTCTTATCAAGGTTGACCACTCTAGCCATTaGTTGAGTTGCTTGGGTAGT | + |
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Preference number: 4 (lower is better) Translates to: LYKVSSDIHEFYPCLIKVDHSSH*LSCLGS Trigger: ACTACCCAAGCAACTCAACCAATGGCTAGAGTGGTC...AACCTTGATAAGACATGGGTAGAACTCATGAATGTCACTGCTGACTTTATACAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021851.8 ENSMUST00000225242.2 |
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| CDS-3UTR TCA 90 bp | GAAGGCCTTGACTGTATAAAGTCAGCAGTGACATTCATGAGTTCTACCCATGTCCCACTGAAGAGTTTTTaGATTCTCTTTTATCTACGG | + |
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Preference number: 4 (lower is better) Translates to: EGLDCIKSAVTFMSSTHVPLKSF*ILFYLR Trigger: CCGTAGATAAAAGAGAATTCAAAAACTCTTCAGTGG...GACATGGGTAGAACTCATGAATGTCACTGCTGACTTTATACAGTCAAGGCCTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021851.8 |
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| CDS-3UTR GCA 90 bp | CCATGTCTTATCAAGGTTTTTGTTTCTAATACCTGTGTCTCAATGATGAACCATCATGCAGGCTGCTGCTaGAGCTCTCATTGCTTTTTC | + |
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Preference number: 4 (lower is better) Translates to: PCLIKVFVSNTCVSMMNHHAGCC*SSHCFF Trigger: GAAAAAGCAATGAGAGCTGCAGCAGCAGCCTGCATG...ATGGTTCATCATTGAGACACAGGTATTAGAAACAAAAACCTTGATAAGACATGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000021851.8 ENSMUST00000225242.2 |
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| CDS-3UTR GCA 90 bp | CTGTGTCTCAATGATGAACCATATTTTAGCTGGGTTTTGTGGAATAGATTCACTTGGAGCTATAGAAAGTaGTTTGCAGCCTTGGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LCLNDEPYFSWVLWNRFTWSYRK*FAALAS Trigger: AGAGGCCAAGGCTGCAAAGCACTTTCTATAGCTCCA...AGTGAATCTATTCCACAAAACCCAGCTAAAATATGGTTCATCATTGAGACACAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021851.8 ENSMUST00000225242.2 |
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| CDS-3UTR TCA 90 bp | GAGTTCTACCCATGTCTTATCAAGGTTTTTGTTTCTAATACCTGTGTCTCAATGGACCAGGATAAAGAATaGCTTGCTTGCTATCTGCCA | + |
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Preference number: 4 (lower is better) Translates to: EFYPCLIKVFVSNTCVSMDQDKE*LACYLP Trigger: TGGCAGATAGCAAGCAAGTCATTCTTTATCCTGGTC...CATTGAGACACAGGTATTAGAAACAAAAACCTTGATAAGACATGGGTAGAACTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021851.8 |
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| CDS-3UTR TCA 90 bp | AAGGTTTTTGTTTCTAATACCTGTGTCTCAATGATGAACCATATTTTAGCTGGGAGTCACTCTCGTCTGTaGCATTTTCTTCCACACTGC | + |
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Preference number: 4 (lower is better) Translates to: KVFVSNTCVSMMNHILAGSHSRL*HFLPHC Trigger: GCAGTGTGGAAGAAAATGTCACAGACGAGAGTGACT...CCCAGCTAAAATATGGTTCATCATTGAGACACAGGTATTAGAAACAAAAACCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021851.8 ENSMUST00000225242.2 |
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| CDS-3UTR TCA 90 bp | CCATGTCTTATCAAGGTTTTTGTTTCTAATACCTGTGTCTCAATGATGAACCATAGTCACTCTCGTCTGTaGCATTTTCTTCCACACTGC | + |
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Preference number: 4 (lower is better) Translates to: PCLIKVFVSNTCVSMMNHSHSRL*HFLPHC Trigger: GCAGTGTGGAAGAAAATGTCACAGACGAGAGTGACT...ATGGTTCATCATTGAGACACAGGTATTAGAAACAAAAACCTTGATAAGACATGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021851.8 ENSMUST00000225242.2 |
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| CDS-3UTR TCA 90 bp | GAGTTCTACCCATGTCTTATCAAGGTTTTTGTTTCTAATACCTGTGTCTCAATGGGGTCGTTCTGCCATTaGAAACATGGAGCTATAGAA | + |
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Preference number: 4 (lower is better) Translates to: EFYPCLIKVFVSNTCVSMGSFCH*KHGAIE Trigger: TTCTATAGCTCCATGTTTTCAATGGCAGAACGACCC...CATTGAGACACAGGTATTAGAAACAAAAACCTTGATAAGACATGGGTAGAACTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021851.8 ENSMUST00000225242.2 |
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| CDS-3UTR GCA 90 bp | AAGGTTTTTGTTTCTAATACCTGTGTCTCAATGATGAACCATATTTTAGCTGGGTGGAGCTATAGAAAGTaGTTTGCAGCCTTGGCCTCT | + |
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Preference number: 4 (lower is better) Translates to: KVFVSNTCVSMMNHILAGWSYRK*FAALAS Trigger: AGAGGCCAAGGCTGCAAAGCACTTTCTATAGCTCCA...CCCAGCTAAAATATGGTTCATCATTGAGACACAGGTATTAGAAACAAAAACCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021851.8 ENSMUST00000225242.2 |
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| CDS-3UTR GCA 90 bp | CCATGTCTTATCAAGGTTTTTGTTTCTAATACCTGTGTCTCAATGATGAACCATCGCCTTGGCTTTCGTTaGGATAGCTTTAGAGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: PCLIKVFVSNTCVSMMNHRLGFR*DSFRGR Trigger: TCTTCCTCTAAAGCTATCGCAACGAAAGCCAAGGCG...ATGGTTCATCATTGAGACACAGGTATTAGAAACAAAAACCTTGATAAGACATGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021851.8 ENSMUST00000225242.2 |
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| CDS-3UTR GCA 90 bp | AAGGTTTTTGTTTCTAATACCTGTGTCTCAATGATGAACCATATTTTAGCTGGGCGCCTTGGCTTTCGTTaGGATAGCTTTAGAGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: KVFVSNTCVSMMNHILAGRLGFR*DSFRGR Trigger: TCTTCCTCTAAAGCTATCGCAACGAAAGCCAAGGCG...CCCAGCTAAAATATGGTTCATCATTGAGACACAGGTATTAGAAACAAAAACCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021851.8 ENSMUST00000225242.2 |
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| CDS-3UTR GCA 90 bp | CCATGTCTTATCAAGGTTTTTGTTTCTAATACCTGTGTCTCAATGATGAACCATAGTTCGACTTACTTTTaGCAGCACTGCTCAAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: PCLIKVFVSNTCVSMMNHSSTYF*QHCSSS Trigger: GGAGCTTGAGCAGTGCTGGCAAAAGTAAGTCGAACT...ATGGTTCATCATTGAGACACAGGTATTAGAAACAAAAACCTTGATAAGACATGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021851.8 ENSMUST00000225242.2 |
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| CDS-3UTR GCA 90 bp | AAGGTTTTTGTTTCTAATACCTGTGTCTCAATGATGAACCATATTTTAGCTGGGAGTTCGACTTACTTTTaGCAGCACTGCTCAAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: KVFVSNTCVSMMNHILAGSSTYF*QHCSSS Trigger: GGAGCTTGAGCAGTGCTGGCAAAAGTAAGTCGAACT...CCCAGCTAAAATATGGTTCATCATTGAGACACAGGTATTAGAAACAAAAACCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021851.8 ENSMUST00000225242.2 |
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| CDS-3UTR GCA 90 bp | GAGGAAGGCCTTGACTGTATAAAGTCAGCAGTGACATTCATGAGTTCTACCCATCTCTATTCAGTAGTATaGTTTTTCGGTGACATTTCT | + |
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Preference number: 4 (lower is better) Translates to: EEGLDCIKSAVTFMSSTHLYSVV*FFGDIS Trigger: AGAAATGTCACCGAAAAAGCATACTACTGAATAGAG...ATGGGTAGAACTCATGAATGTCACTGCTGACTTTATACAGTCAAGGCCTTCCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021851.8 ENSMUST00000225242.2 |
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| CDS-3UTR CCA 90 bp | CTGTATAAAGTCAGCAGTGACATTCATGAGTTCTACCCATGTCTTATCAAGGTTGGAAACATTTTGTTCTaGCTTGCCAGAGCCAGAATT | + |
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Preference number: 4 (lower is better) Translates to: LYKVSSDIHEFYPCLIKVGNILF*LARARI Trigger: AATTCTGGCTCTGGCAAGCCAGAACAAAATGTTTCC...AACCTTGATAAGACATGGGTAGAACTCATGAATGTCACTGCTGACTTTATACAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021851.8 ENSMUST00000225242.2 |
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| CDS-3UTR CCA 90 bp | AAGGTTTTTGTTTCTAATACCTGTGTCTCAATGATGAACCATATTTTAGCTGGGGACCACTCTAGCCATTaGTTGAGTTGCTTGGGTAGT | + |
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Preference number: 4 (lower is better) Translates to: KVFVSNTCVSMMNHILAGDHSSH*LSCLGS Trigger: ACTACCCAAGCAACTCAACCAATGGCTAGAGTGGTC...CCCAGCTAAAATATGGTTCATCATTGAGACACAGGTATTAGAAACAAAAACCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021851.8 ENSMUST00000225242.2 |
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| CDS-3UTR TCA 90 bp | CCATGTCTTATCAAGGTTTTTGTTTCTAATACCTGTGTCTCAATGATGAACCATGGGTCGTTCTGCCATTaGAAACATGGAGCTATAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PCLIKVFVSNTCVSMMNHGSFCH*KHGAIE Trigger: TTCTATAGCTCCATGTTTTCAATGGCAGAACGACCC...ATGGTTCATCATTGAGACACAGGTATTAGAAACAAAAACCTTGATAAGACATGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021851.8 ENSMUST00000225242.2 |
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| CDS-3UTR GCA 90 bp | TGTATAAAGTCAGCAGTGACATTCATGAGTTCTACCCATGTCTTATCAAGGTTTATCAAAGAGTTCTTCTaGATCCAGGTTCCACTGAGA | + |
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Preference number: 4 (lower is better) Translates to: CIKSAVTFMSSTHVLSRFIKEFF*IQVPLR Trigger: TCTCAGTGGAACCTGGATGCAGAAGAACTCTTTGAT...AAACCTTGATAAGACATGGGTAGAACTCATGAATGTCACTGCTGACTTTATACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021851.8 ENSMUST00000225242.2 |
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| CDS-3UTR GCA 90 bp | CTGTATAAAGTCAGCAGTGACATTCATGAGTTCTACCCATGTCTTATCAAGGTTCTCTGTATGGTCATATaGTGTAATCTTTCCAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LYKVSSDIHEFYPCLIKVLCMVI*CNLSSS Trigger: GGAACTGGAAAGATTACAGCATATGACCATACAGAG...AACCTTGATAAGACATGGGTAGAACTCATGAATGTCACTGCTGACTTTATACAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021851.8 ENSMUST00000225242.2 |
||
| CDS-3UTR GCA 90 bp | CTGTATAAAGTCAGCAGTGACATTCATGAGTTCTACCCATGTCTTATCAAGGTTCATTTTGTTCTGGCTTaGCAGAGCCAGAATTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LYKVSSDIHEFYPCLIKVHFVLA*QSQNCF Trigger: AAAACAATTCTGGCTCTGGCAAGCCAGAACAAAATG...AACCTTGATAAGACATGGGTAGAACTCATGAATGTCACTGCTGACTTTATACAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021851.8 ENSMUST00000225242.2 |
||
| CDS-3UTR CCA 90 bp | CTGTATAAAGTCAGCAGTGACATTCATGAGTTCTACCCATGTCTTATCAAGGTTTCCAGCTTTCACATTTaGAGAAGGCAAATCTGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: LYKVSSDIHEFYPCLIKVSSFHI*RRQICV Trigger: TACACAGATTTGCCTTCTCCAAATGTGAAAGCTGGA...AACCTTGATAAGACATGGGTAGAACTCATGAATGTCACTGCTGACTTTATACAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021851.8 ENSMUST00000225242.2 |
||
| CDS-3UTR CCA 90 bp | CTGTATAAAGTCAGCAGTGACATTCATGAGTTCTACCCATGTCTTATCAAGGTTCACACTGCTTTGAAGTaGATGAACATTTTAGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LYKVSSDIHEFYPCLIKVHTALK*MNILAV Trigger: CACTGCTAAAATGTTCATCCACTTCAAAGCAGTGTG...AACCTTGATAAGACATGGGTAGAACTCATGAATGTCACTGCTGACTTTATACAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021851.8 ENSMUST00000225242.2 |
||
| CDS-3UTR GCA 90 bp | TTCTACCCATGTCTTATCAAGGTTTTTGTTTCTAATACCTGTGTCTCAATGATGATCAAAGAGTTCTTCTaGATCCAGGTTCCACTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: FYPCLIKVFVSNTCVSMMIKEFF*IQVPLR Trigger: TCTCAGTGGAACCTGGATGCAGAAGAACTCTTTGAT...CATCATTGAGACACAGGTATTAGAAACAAAAACCTTGATAAGACATGGGTAGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021851.8 ENSMUST00000225242.2 |
||
| CDS-3UTR GCA 90 bp | AAGGTTTTTGTTTCTAATACCTGTGTCTCAATGATGAACCATATTTTAGCTGGGTACTTTTGCCAGCACTaGTCAAGCTCCATTTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: KVFVSNTCVSMMNHILAGYFCQH*SSSIWK Trigger: TTTCCAAATGGAGCTTGAGCAGTGCTGGCAAAAGTA...CCCAGCTAAAATATGGTTCATCATTGAGACACAGGTATTAGAAACAAAAACCTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021851.8 ENSMUST00000225242.2 |
||
| CDS-3UTR CCA 90 bp | CTGTATAAAGTCAGCAGTGACATTCATGAGTTCTACCCATGTCTTATCAAGGTTATACTTGCTAATAAGTaGTTTACAGTGAAGAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LYKVSSDIHEFYPCLIKVILANK*FTVKSL Trigger: CAGGCTCTTCACTGTAAACCACTTATTAGCAAGTAT...AACCTTGATAAGACATGGGTAGAACTCATGAATGTCACTGCTGACTTTATACAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021851.8 |
||
| CDS-3UTR CCA 90 bp | GAGTTCTACCCATGTCTTATCAAGGTTTTTGTTTCTAATACCTGTGTCTCAATGTCCAGCTTTCACATTTaGAGAAGGCAAATCTGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: EFYPCLIKVFVSNTCVSMSSFHI*RRQICV Trigger: TACACAGATTTGCCTTCTCCAAATGTGAAAGCTGGA...CATTGAGACACAGGTATTAGAAACAAAAACCTTGATAAGACATGGGTAGAACTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021851.8 ENSMUST00000225242.2 |
||
| CDS-3UTR CCA 90 bp | TGTATAAAGTCAGCAGTGACATTCATGAGTTCTACCCATGTCTTATCAAGGTTTGGCAAGGGTTTAAACTaGAGTTCTTGGAGTTCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: CIKSAVTFMSSTHVLSRFGKGLN*SSWSSL Trigger: TAAAGAACTCCAAGAACTCCAGTTTAAACCCTTGCC...AAACCTTGATAAGACATGGGTAGAACTCATGAATGTCACTGCTGACTTTATACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021851.8 ENSMUST00000225242.2 |
||
| CDS-3UTR CCA 90 bp | TGTATAAAGTCAGCAGTGACATTCATGAGTTCTACCCATGTCTTATCAAGGTTTGGTGACATTTCTTTTTaGTCCTTGGCACTTTACCTT | + |
|
Preference number: 4 (lower is better) Translates to: CIKSAVTFMSSTHVLSRFGDISF*SLALYL Trigger: AAGGTAAAGTGCCAAGGACCAAAAAGAAATGTCACC...AAACCTTGATAAGACATGGGTAGAACTCATGAATGTCACTGCTGACTTTATACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021851.8 ENSMUST00000225242.2 |
||
| CDS-3UTR CCA 90 bp | CTGTGTCTCAATGATGAACCATATTTTAGCTGGGTTTTGTGGAATAGATTCACTGGTGACATTTCTTTTTaGTCCTTGGCACTTTACCTT | + |
|
Preference number: 4 (lower is better) Translates to: LCLNDEPYFSWVLWNRFTGDISF*SLALYL Trigger: AAGGTAAAGTGCCAAGGACCAAAAAGAAATGTCACC...AGTGAATCTATTCCACAAAACCCAGCTAAAATATGGTTCATCATTGAGACACAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021851.8 ENSMUST00000225242.2 |
||
| CDS-3UTR TCA 90 bp | GAGTTCTACCCATGTCTTATCAAGGTTTTTGTTTCTAATACCTGTGTCTCAATGAGTATGCTTTTTCGGTaGCATTTCTTTTTGGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: EFYPCLIKVFVSNTCVSMSMLFR*HFFLVL Trigger: AAGGACCAAAAAGAAATGTCACCGAAAAAGCATACT...CATTGAGACACAGGTATTAGAAACAAAAACCTTGATAAGACATGGGTAGAACTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000021851.8 ENSMUST00000225242.2 |
||
| CDS-3UTR GCA 90 bp | TTCTACCCATGTCTTATCAAGGTTTTTGTTTCTAATACCTGTGTCTCAATGATGCTCTGTATGGTCATATaGTGTAATCTTTCCAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FYPCLIKVFVSNTCVSMMLCMVI*CNLSSS Trigger: GGAACTGGAAAGATTACAGCATATGACCATACAGAG...CATCATTGAGACACAGGTATTAGAAACAAAAACCTTGATAAGACATGGGTAGAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021851.8 ENSMUST00000225242.2 |
||
| CDS-3UTR GCA 90 bp | CCATGTCTTATCAAGGTTTTTGTTTCTAATACCTGTGTCTCAATGATGAACCATCATTTTGTTCTGGCTTaGCAGAGCCAGAATTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: PCLIKVFVSNTCVSMMNHHFVLA*QSQNCF Trigger: AAAACAATTCTGGCTCTGGCAAGCCAGAACAAAATG...ATGGTTCATCATTGAGACACAGGTATTAGAAACAAAAACCTTGATAAGACATGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021851.8 ENSMUST00000225242.2 |
||
| CDS-3UTR CCA 90 bp | GAGTTCTACCCATGTCTTATCAAGGTTTTTGTTTCTAATACCTGTGTCTCAATGCTGCCATTGAAAACATaGAGCTATAGAAAGTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: EFYPCLIKVFVSNTCVSMLPLKT*SYRKCF Trigger: AAAGCACTTTCTATAGCTCCATGTTTTCAATGGCAG...CATTGAGACACAGGTATTAGAAACAAAAACCTTGATAAGACATGGGTAGAACTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021851.8 ENSMUST00000225242.2 |
||
| CDS-3UTR CCA 90 bp | TTCTACCCATGTCTTATCAAGGTTTTTGTTTCTAATACCTGTGTCTCAATGATGCACACTGCTTTGAAGTaGATGAACATTTTAGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: FYPCLIKVFVSNTCVSMMHTALK*MNILAV Trigger: CACTGCTAAAATGTTCATCCACTTCAAAGCAGTGTG...CATCATTGAGACACAGGTATTAGAAACAAAAACCTTGATAAGACATGGGTAGAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021851.8 ENSMUST00000225242.2 |
||
| CDS-3UTR TCA 90 bp | TTCTACCCATGTCTTATCAAGGTTTTTGTTTCTAATACCTGTGTCTCAATGATGAGTATGCTTTTTCGGTaGCATTTCTTTTTGGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: FYPCLIKVFVSNTCVSMMSMLFR*HFFLVL Trigger: AAGGACCAAAAAGAAATGTCACCGAAAAAGCATACT...CATCATTGAGACACAGGTATTAGAAACAAAAACCTTGATAAGACATGGGTAGAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000021851.8 ENSMUST00000225242.2 |
||
| CDS-3UTR GCA 90 bp | GAGTTCTACCCATGTCTTATCAAGGTTTTTGTTTCTAATACCTGTGTCTCAATGCTCTATTCAGTAGTATaGTTTTTCGGTGACATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: EFYPCLIKVFVSNTCVSMLYSVV*FFGDIS Trigger: AGAAATGTCACCGAAAAAGCATACTACTGAATAGAG...CATTGAGACACAGGTATTAGAAACAAAAACCTTGATAAGACATGGGTAGAACTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000021851.8 ENSMUST00000225242.2 |
||
| CDS-3UTR CCA 90 bp | TTCTACCCATGTCTTATCAAGGTTTTTGTTTCTAATACCTGTGTCTCAATGATGCTGCCATTGAAAACATaGAGCTATAGAAAGTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: FYPCLIKVFVSNTCVSMMLPLKT*SYRKCF Trigger: AAAGCACTTTCTATAGCTCCATGTTTTCAATGGCAG...CATCATTGAGACACAGGTATTAGAAACAAAAACCTTGATAAGACATGGGTAGAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021851.8 ENSMUST00000225242.2 |
||
| CDS GCA 90 bp | TCGTCGTCTTCCTGGTCTCCAGCCCAGGGCACGGGCTCCTCCTCTTaGTGGGCGAACAGCTCAGTGGGCTCTGGCTGGACCCCAGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SSSSWSPAQGTGSSS*WANSSVGSGWTPAF Trigger: GAAGGCTGGGGTCCAGCCAGAGCCCACTGAGCTGTTCGCCCAGCAAGAGGAGGAGCCCGTGCCCTGGGCTGGAGACCAGGAAGACGACGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223834.2 |
||
| CDS CCA 90 bp | TCGTCTTCCTGGTCTCCAGCCCAGGGCACGGGCTCCTCCTCTTGCTaGGCGAACAGCTCAGTGGGCTCTGGCTGGACCCCAGCCTTCGTT | + |
|
Preference number: 5 (lower is better) Translates to: SSSWSPAQGTGSSSC*ANSSVGSGWTPAFV Trigger: AACGAAGGCTGGGGTCCAGCCAGAGCCCACTGAGCTGTTCGCCCAGCAAGAGGAGGAGCCCGTGCCCTGGGCTGGAGACCAGGAAGACGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223834.2 |
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| CDS CCA 90 bp | TCGTCGTCCTCGTCGTTGTTGTTGTCGTCTTTGTCGTCGTCTTCCTaGTCTCCAGCCCAGGGCACGGGCTCCTCCTCTTGCTGGGCGAAC | + |
|
Preference number: 5 (lower is better) Translates to: SSSSSLLLSSLSSSS*SPAQGTGSSSCWAN Trigger: GTTCGCCCAGCAAGAGGAGGAGCCCGTGCCCTGGGCTGGAGACCAGGAAGACGACGACAAAGACGACAACAACAACGACGAGGACGACGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223834.2 |
||
| CDS TCA 90 bp | GGGTATAGGGGAAACTGGCATTGGGGACCTCGGTGGGAGGCATCTTaGGACCACTCTAGCCATTGGTTGAGTTGCTTGGGTAGTAGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: GYRGNWHWGPRWEAS*DHSSHWLSCLGSSS Trigger: ACTACTACTACCCAAGCAACTCAACCAATGGCTAGAGTGGTCTCAAGATGCCTCCCACCGAGGTCCCCAATGCCAGTTTCCCCTATACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021851.8 ENSMUST00000223834.2 ENSMUST00000225242.2 |
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| CDS GCA 90 bp | GGCTGCTGCTGCAGCTCTCATTGCTTTTTCTTCCCATTTTCTTGGTaGTGTTCTTCTGTTCCCTTAAGGTCTCATCCGCCTCGAAGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: GCCCSSHCFFFPFSW*CSSVPLRSHPPRSP Trigger: GGGACTTCGAGGCGGATGAGACCTTAAGGGAACAGAAGAACAGCACCAAGAAAATGGGAAGAAAAAGCAATGAGAGCTGCAGCAGCAGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223834.2 |
||
| CDS TCA 90 bp | AGCTTTCACATTTGGAGAAGGCAAATCTGTGTAGGTCCAGAGTGTTaGAAGGGGCAGGGAGAAAGTCGGCATATACAGGCACTTGGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: SFHIWRRQICVGPEC*KGQGESRHIQALGL Trigger: CAGGCCAAGTGCCTGTATATGCCGACTTTCTCCCTGCCCCTTTCAACACTCTGGACCTACACAGATTTGCCTTCTCCAAATGTGAAAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021851.8 ENSMUST00000223834.2 ENSMUST00000225242.2 |
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| CDS TCA 90 bp | GGCTTTCGTTGCGATAGCTTTAGAGGAAGAGGGTCGTTCTGCCATTaGAAACATGGAGCTATAGAAAGTGCTTTGCAGCCTTGGCCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: GFRCDSFRGRGSFCH*KHGAIESALQPWPL Trigger: GAGAGGCCAAGGCTGCAAAGCACTTTCTATAGCTCCATGTTTTCAATGGCAGAACGACCCTCTTCCTCTAAAGCTATCGCAACGAAAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021851.8 ENSMUST00000223834.2 ENSMUST00000225242.2 |
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| CDS GCA 90 bp | TCCACTGAGAGTGATTCTCCTGAGAGATGCTTGACACATGCAGGCTaGTGCTGCAGCTCTCATTGCTTTTTCTTCCCATTTTCTTGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: STESDSPERCLTHAG*CCSSHCFFFPFSWC Trigger: GCACCAAGAAAATGGGAAGAAAAAGCAATGAGAGCTGCAGCAGCAGCCTGCATGTGTCAAGCATCTCTCAGGAGAATCACTCTCAGTGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223834.2 |
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| CDS CCA 90 bp | TTCAGAACGCTTCTTTTGAGAAACTTAGAGATGATCTTCTCTCTCTaGACGTTGCTGAACACTCTGCCTTCTGGGAGCCAGCTGGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: FRTLLLRNLEMIFSL*TLLNTLPSGSQLAL Trigger: CAAGGCCAGCTGGCTCCCAGAAGGCAGAGTGTTCAGCAACGTCCAGAGAGAGAAGATCATCTCTAAGTTTCTCAAAAGAAGCGTTCTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223834.2 |
||
| CDS-3UTR CAA 90 bp | GAAGGCCTTGACTGTATAAAGTCAGCAGTGACATTCATGAGTTCTACCCATGTCGGCATATACAGGCACTaGGCCTGCTTCCTCTGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: EGLDCIKSAVTFMSSTHVGIYRH*ACFLWE Trigger: TTCCCAGAGGAAGCAGGCCAAGTGCCTGTATATGCC...GACATGGGTAGAACTCATGAATGTCACTGCTGACTTTATACAGTCAAGGCCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021851.8 ENSMUST00000225242.2 |
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| CDS TCA 90 bp | AAGAAAGTCTCCATCAGCATAAGGCCAGCACAGACCTGCTGGCATTaGCTGACCAGGATAAAGAATGACTTGCTTGCTATCTGCCAAACC | + |
|
Preference number: 5 (lower is better) Translates to: KKVSISIRPAQTCWH*LTRIKNDLLAICQT Trigger: GGTTTGGCAGATAGCAAGCAAGTCATTCTTTATCCTGGTCAGTCAATGCCAGCAGGTCTGTGCTGGCCTTATGCTGATGGAGACTTTCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021851.8 ENSMUST00000223834.2 |
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| CDS GCA 90 bp | GAGAGTGATTCTCCTGAGAGATGCTTGACACATGCAGGCTGCTGCTaGAGCTCTCATTGCTTTTTCTTCCCATTTTCTTGGTGCTGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: ESDSPERCLTHAGCC*SSHCFFFPFSWCCS Trigger: AGAACAGCACCAAGAAAATGGGAAGAAAAAGCAATGAGAGCTGCAGCAGCAGCCTGCATGTGTCAAGCATCTCTCAGGAGAATCACTCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223834.2 |
||
| CDS GCA 90 bp | ACTGAGAGTGATTCTCCTGAGAGATGCTTGACACATGCAGGCTGCTaGTGCAGCTCTCATTGCTTTTTCTTCCCATTTTCTTGGTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: TESDSPERCLTHAGC*CSSHCFFFPFSWCC Trigger: ACAGCACCAAGAAAATGGGAAGAAAAAGCAATGAGAGCTGCAGCAGCAGCCTGCATGTGTCAAGCATCTCTCAGGAGAATCACTCTCAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223834.2 |
||
| CDS-3UTR CAA 90 bp | GAGGAAGGCCTTGACTGTATAAAGTCAGCAGTGACATTCATGAGTTCTACCCATTGGCTCTTGTTAGTTTaGCCACCTGCTGCCCCATCA | + |
|
Preference number: 5 (lower is better) Translates to: EEGLDCIKSAVTFMSSTHWLLLV*PPAAPS Trigger: TGATGGGGCAGCAGGTGGCAAAACTAACAAGAGCCA...ATGGGTAGAACTCATGAATGTCACTGCTGACTTTATACAGTCAAGGCCTTCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021851.8 ENSMUST00000225242.2 |
||
| CDS-3UTR CAA 90 bp | GAGGAAGGCCTTGACTGTATAAAGTCAGCAGTGACATTCATGAGTTCTACCCATGTAGTAGTAGTAGGCTaGAGTGGGGGTTCCTGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: EEGLDCIKSAVTFMSSTHVVVVG*SGGSWQ Trigger: TTGCCAGGAACCCCCACTCAAGCCTACTACTACTAC...ATGGGTAGAACTCATGAATGTCACTGCTGACTTTATACAGTCAAGGCCTTCCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021851.8 ENSMUST00000225242.2 |
||
| CDS CCA 90 bp | ATGACTTGCTTGCTATCTGCCAAACCCGGAATACTTGCTAATAAGTaGTTTACAGTGAAGAGCCTGGGACTGTTGGCTGCATTGAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: MTCLLSAKPGILANK*FTVKSLGLLAALKP Trigger: TGGCTTCAATGCAGCCAACAGTCCCAGGCTCTTCACTGTAAACCACTTATTAGCAAGTATTCCGGGTTTGGCAGATAGCAAGCAAGTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021851.8 ENSMUST00000223834.2 |
||
| CDS-3UTR CAA 90 bp | GAAGGCCTTGACTGTATAAAGTCAGCAGTGACATTCATGAGTTCTACCCATGTCGGACTGTTGGCTGCATaGAAGCCAGTTTCCACTGAA | + |
|
Preference number: 5 (lower is better) Translates to: EGLDCIKSAVTFMSSTHVGLLAA*KPVSTE Trigger: TTCAGTGGAAACTGGCTTCAATGCAGCCAACAGTCC...GACATGGGTAGAACTCATGAATGTCACTGCTGACTTTATACAGTCAAGGCCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021851.8 |
||
| CDS-3UTR CAA 90 bp | AGTGAGGAAGGCCTTGACTGTATAAAGTCAGCAGTGACATTCATGAGTTCTACCGCTATAGAAAGTGCTTaGCAGCCTTGGCCTCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SEEGLDCIKSAVTFMSSTAIESA*QPWPLS Trigger: AGAGAGAGGCCAAGGCTGCAAAGCACTTTCTATAGC...GGTAGAACTCATGAATGTCACTGCTGACTTTATACAGTCAAGGCCTTCCTCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021851.8 ENSMUST00000225242.2 |
||
| CDS-3UTR CAA 90 bp | GAAGGCCTTGACTGTATAAAGTCAGCAGTGACATTCATGAGTTCTACCCATGTCCCATTTGGAAACATTTaGTTCTGGCTTGCCAGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: EGLDCIKSAVTFMSSTHVPFGNI*FWLARA Trigger: GGCTCTGGCAAGCCAGAACAAAATGTTTCCAAATGG...GACATGGGTAGAACTCATGAATGTCACTGCTGACTTTATACAGTCAAGGCCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021851.8 ENSMUST00000225242.2 |
||
| CDS-3UTR CAA 90 bp | CTGTATAAAGTCAGCAGTGACATTCATGAGTTCTACCCATGTCTTATCAAGGTTTGGCTCTTGTTAGTTTaGCCACCTGCTGCCCCATCA | + |
|
Preference number: 5 (lower is better) Translates to: LYKVSSDIHEFYPCLIKVWLLLV*PPAAPS Trigger: TGATGGGGCAGCAGGTGGCAAAACTAACAAGAGCCA...AACCTTGATAAGACATGGGTAGAACTCATGAATGTCACTGCTGACTTTATACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021851.8 ENSMUST00000225242.2 |
||
| CDS-3UTR CAA 90 bp | AGTGAGGAAGGCCTTGACTGTATAAAGTCAGCAGTGACATTCATGAGTTCTACCTTTTCCAGATGGCTCTaGTTAGTTTTGCCACCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: SEEGLDCIKSAVTFMSSTFSRWL*LVLPPA Trigger: AGCAGGTGGCAAAACTAACAAGAGCCATCTGGAAAA...GGTAGAACTCATGAATGTCACTGCTGACTTTATACAGTCAAGGCCTTCCTCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021851.8 ENSMUST00000225242.2 |
||
| CDS-3UTR CAA 90 bp | CTGTATAAAGTCAGCAGTGACATTCATGAGTTCTACCCATGTCTTATCAAGGTTAAGTGCTTTGCAGCCTaGGCCTCTCTCTCTGTATGG | + |
|
Preference number: 5 (lower is better) Translates to: LYKVSSDIHEFYPCLIKVKCFAA*ASLSVW Trigger: CCATACAGAGAGAGAGGCCAAGGCTGCAAAGCACTT...AACCTTGATAAGACATGGGTAGAACTCATGAATGTCACTGCTGACTTTATACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021851.8 ENSMUST00000225242.2 |
||
| CDS-3UTR CAA 90 bp | CCATGTCTTATCAAGGTTTTTGTTTCTAATACCTGTGTCTCAATGATGAACCATGGCATATACAGGCACTaGGCCTGCTTCCTCTGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: PCLIKVFVSNTCVSMMNHGIYRH*ACFLWE Trigger: TTCCCAGAGGAAGCAGGCCAAGTGCCTGTATATGCC...ATGGTTCATCATTGAGACACAGGTATTAGAAACAAAAACCTTGATAAGACATGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021851.8 ENSMUST00000225242.2 |
||
| CDS-3UTR CAA 90 bp | CTGTGTCTCAATGATGAACCATATTTTAGCTGGGTTTTGTGGAATAGATTCACTAAGTGCTTTGCAGCCTaGGCCTCTCTCTCTGTATGG | + |
|
Preference number: 5 (lower is better) Translates to: LCLNDEPYFSWVLWNRFTKCFAA*ASLSVW Trigger: CCATACAGAGAGAGAGGCCAAGGCTGCAAAGCACTT...AGTGAATCTATTCCACAAAACCCAGCTAAAATATGGTTCATCATTGAGACACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021851.8 ENSMUST00000225242.2 |
||
| CDS-3UTR CAA 90 bp | TGTATAAAGTCAGCAGTGACATTCATGAGTTCTACCCATGTCTTATCAAGGTTTGTAGTAGTAGTAGGCTaGAGTGGGGGTTCCTGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: CIKSAVTFMSSTHVLSRFVVVVG*SGGSWQ Trigger: TTGCCAGGAACCCCCACTCAAGCCTACTACTACTAC...AAACCTTGATAAGACATGGGTAGAACTCATGAATGTCACTGCTGACTTTATACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021851.8 ENSMUST00000225242.2 |
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| CDS-3UTR CAA 90 bp | AGTGAGGAAGGCCTTGACTGTATAAAGTCAGCAGTGACATTCATGAGTTCTACCATTTCTTTTTGGTCCTaGGCACTTTACCTTCTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: SEEGLDCIKSAVTFMSSTISFWS*ALYLLP Trigger: GGGAAGAAGGTAAAGTGCCAAGGACCAAAAAGAAAT...GGTAGAACTCATGAATGTCACTGCTGACTTTATACAGTCAAGGCCTTCCTCACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021851.8 ENSMUST00000225242.2 |
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| CDS-3UTR CAA 90 bp | CTGTATAAAGTCAGCAGTGACATTCATGAGTTCTACCCATGTCTTATCAAGGTTCCATTTGGAAACATTTaGTTCTGGCTTGCCAGAGCC | + |
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Preference number: 5 (lower is better) Translates to: LYKVSSDIHEFYPCLIKVPFGNI*FWLARA Trigger: GGCTCTGGCAAGCCAGAACAAAATGTTTCCAAATGG...AACCTTGATAAGACATGGGTAGAACTCATGAATGTCACTGCTGACTTTATACAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021851.8 ENSMUST00000225242.2 |
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| CDS-3UTR CAA 90 bp | CCATGTCTTATCAAGGTTTTTGTTTCTAATACCTGTGTCTCAATGATGAACCATGCTATAGAAAGTGCTTaGCAGCCTTGGCCTCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: PCLIKVFVSNTCVSMMNHAIESA*QPWPLS Trigger: AGAGAGAGGCCAAGGCTGCAAAGCACTTTCTATAGC...ATGGTTCATCATTGAGACACAGGTATTAGAAACAAAAACCTTGATAAGACATGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021851.8 ENSMUST00000225242.2 |
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| CDS-3UTR CAA 90 bp | GAAGGCCTTGACTGTATAAAGTCAGCAGTGACATTCATGAGTTCTACCCATGTCTTTAAACTGGAGTTCTaGGAGTTCTTTAGGTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: EGLDCIKSAVTFMSSTHVFKLEF*EFFRSS Trigger: TGATGACCTAAAGAACTCCAAGAACTCCAGTTTAAA...GACATGGGTAGAACTCATGAATGTCACTGCTGACTTTATACAGTCAAGGCCTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021851.8 ENSMUST00000225242.2 |
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| CDS-3UTR CAA 90 bp | TGTATAAAGTCAGCAGTGACATTCATGAGTTCTACCCATGTCTTATCAAGGTTTCACTCTAGCCATTGGTaGAGTTGCTTGGGTAGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: CIKSAVTFMSSTHVLSRFHSSHW*SCLGSS Trigger: ACTACTACCCAAGCAACTCAACCAATGGCTAGAGTG...AAACCTTGATAAGACATGGGTAGAACTCATGAATGTCACTGCTGACTTTATACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021851.8 ENSMUST00000225242.2 |
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| CDS-3UTR CAA 90 bp | CTGTATAAAGTCAGCAGTGACATTCATGAGTTCTACCCATGTCTTATCAAGGTTAGGATAAAGAATGACTaGCTTGCTATCTGCCAAACC | + |
|
Preference number: 5 (lower is better) Translates to: LYKVSSDIHEFYPCLIKVRIKND*LAICQT Trigger: GGTTTGGCAGATAGCAAGCAAGTCATTCTTTATCCT...AACCTTGATAAGACATGGGTAGAACTCATGAATGTCACTGCTGACTTTATACAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021851.8 |
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| CDS-3UTR CAA 90 bp | CTGTATAAAGTCAGCAGTGACATTCATGAGTTCTACCCATGTCTTATCAAGGTTTTCCAGCTTTCACATTaGGAGAAGGCAAATCTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: LYKVSSDIHEFYPCLIKVFQLSH*EKANLC Trigger: ACACAGATTTGCCTTCTCCAAATGTGAAAGCTGGAA...AACCTTGATAAGACATGGGTAGAACTCATGAATGTCACTGCTGACTTTATACAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021851.8 ENSMUST00000225242.2 |
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| CDS-3UTR CAA 90 bp | TGTATAAAGTCAGCAGTGACATTCATGAGTTCTACCCATGTCTTATCAAGGTTTCTGCTCAAGCTCCATTaGGAAACATTTTGTTCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: CIKSAVTFMSSTHVLSRFLLKLH*ETFCSG Trigger: GCCAGAACAAAATGTTTCCAAATGGAGCTTGAGCAG...AAACCTTGATAAGACATGGGTAGAACTCATGAATGTCACTGCTGACTTTATACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021851.8 ENSMUST00000225242.2 |
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| CDS-3UTR CAA 90 bp | AAGGTTTTTGTTTCTAATACCTGTGTCTCAATGATGAACCATATTTTAGCTGGGCACTCTAGCCATTGGTaGAGTTGCTTGGGTAGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: KVFVSNTCVSMMNHILAGHSSHW*SCLGSS Trigger: ACTACTACCCAAGCAACTCAACCAATGGCTAGAGTG...CCCAGCTAAAATATGGTTCATCATTGAGACACAGGTATTAGAAACAAAAACCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021851.8 ENSMUST00000225242.2 |
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| CDS-3UTR CAA 90 bp | CCATGTCTTATCAAGGTTTTTGTTTCTAATACCTGTGTCTCAATGATGAACCATTTTTCCAGATGGCTCTaGTTAGTTTTGCCACCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: PCLIKVFVSNTCVSMMNHFSRWL*LVLPPA Trigger: AGCAGGTGGCAAAACTAACAAGAGCCATCTGGAAAA...ATGGTTCATCATTGAGACACAGGTATTAGAAACAAAAACCTTGATAAGACATGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000021851.8 ENSMUST00000225242.2 |
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| CDS-3UTR CAA 90 bp | GAGTTCTACCCATGTCTTATCAAGGTTTTTGTTTCTAATACCTGTGTCTCAATGTTCCAGCTTTCACATTaGGAGAAGGCAAATCTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: EFYPCLIKVFVSNTCVSMFQLSH*EKANLC Trigger: ACACAGATTTGCCTTCTCCAAATGTGAAAGCTGGAA...CATTGAGACACAGGTATTAGAAACAAAAACCTTGATAAGACATGGGTAGAACTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021851.8 ENSMUST00000225242.2 |
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| CDS-3UTR CAA 90 bp | TTCTACCCATGTCTTATCAAGGTTTTTGTTTCTAATACCTGTGTCTCAATGATGCTGCTCAAGCTCCATTaGGAAACATTTTGTTCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: FYPCLIKVFVSNTCVSMMLLKLH*ETFCSG Trigger: GCCAGAACAAAATGTTTCCAAATGGAGCTTGAGCAG...CATCATTGAGACACAGGTATTAGAAACAAAAACCTTGATAAGACATGGGTAGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021851.8 ENSMUST00000225242.2 |
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| CDS-3UTR CAA 90 bp | CCATGTCTTATCAAGGTTTTTGTTTCTAATACCTGTGTCTCAATGATGAACCATATTTCTTTTTGGTCCTaGGCACTTTACCTTCTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: PCLIKVFVSNTCVSMMNHISFWS*ALYLLP Trigger: GGGAAGAAGGTAAAGTGCCAAGGACCAAAAAGAAAT...ATGGTTCATCATTGAGACACAGGTATTAGAAACAAAAACCTTGATAAGACATGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000021851.8 ENSMUST00000225242.2 |
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| CDS-3UTR CAA 90 bp | TGTATAAAGTCAGCAGTGACATTCATGAGTTCTACCCATGTCTTATCAAGGTTTAAAGAGTCACCATTGTaGTTTTCCATAGTTGAACAC | + |
|
Preference number: 5 (lower is better) Translates to: CIKSAVTFMSSTHVLSRFKESPL*FSIVEH Trigger: GTGTTCAACTATGGAAAACAACAATGGTGACTCTTT...AAACCTTGATAAGACATGGGTAGAACTCATGAATGTCACTGCTGACTTTATACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021851.8 |
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| CDS-3UTR CAA 90 bp | CTGTGTCTCAATGATGAACCATATTTTAGCTGGGTTTTGTGGAATAGATTCACTTTTAAACTGGAGTTCTaGGAGTTCTTTAGGTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: LCLNDEPYFSWVLWNRFTFKLEF*EFFRSS Trigger: TGATGACCTAAAGAACTCCAAGAACTCCAGTTTAAA...AGTGAATCTATTCCACAAAACCCAGCTAAAATATGGTTCATCATTGAGACACAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021851.8 ENSMUST00000225242.2 |
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| CDS GCA 72 bp | TCCTGGTCTCCAGCCCAGGGCACGGGCTCCTCCTCTTaGTGGGCGAACAGCTCAGTGGGCTCTGGCTGGACC | + |
|
Preference number: 6 (lower is better) Translates to: SWSPAQGTGSSS*WANSSVGSGWT Trigger: GGTCCAGCCAGAGCCCACTGAGCTGTTCGCCCAGCAAGAGGAGGAGCCCGTGCCCTGGGCTGGAGACCAGGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223834.2 |
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| CDS CCA 72 bp | TGGTCTCCAGCCCAGGGCACGGGCTCCTCCTCTTGCTaGGCGAACAGCTCAGTGGGCTCTGGCTGGACCCCA | + |
|
Preference number: 6 (lower is better) Translates to: WSPAQGTGSSSC*ANSSVGSGWTP Trigger: TGGGGTCCAGCCAGAGCCCACTGAGCTGTTCGCCCAGCAAGAGGAGGAGCCCGTGCCCTGGGCTGGAGACCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223834.2 |
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| CDS CAA 90 bp | GTCGTCGTCTTCCTGGTCTCCAGCCCAGGGCACGGGCTCCTCCTCTaGCTGGGCGAACAGCTCAGTGGGCTCTGGCTGGACCCCAGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: VVVFLVSSPGHGLLL*LGEQLSGLWLDPSL Trigger: AAGGCTGGGGTCCAGCCAGAGCCCACTGAGCTGTTCGCCCAGCAAGAGGAGGAGCCCGTGCCCTGGGCTGGAGACCAGGAAGACGACGAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223834.2 |
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| CDS CCA 72 bp | GTGGTGCTAGGACCGGTGGAGCTGGAGTCCTCTCTCTaGGAGTTGGGGCCCTCCCACCTCAGCTGCTGCGAG | + |
|
Preference number: 6 (lower is better) Translates to: VVLGPVELESSL*ELGPSHLSCCE Trigger: CTCGCAGCAGCTGAGGTGGGAGGGCCCCAACTCCCAGAGAGAGGACTCCAGCTCCACCGGTCCTAGCACCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223834.2 |
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| CDS TCA 72 bp | CCAGCTGGCCTTGTCGAATGCACAGCTGTGGCCTGCTaGCAGTGGAAGGTGCTCTGGAGACACAGGAGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: PAGLVECTAVAC*QWKVLWRHRSS Trigger: AGAGCTCCTGTGTCTCCAGAGCACCTTCCACTGTCAGCAGGCCACAGCTGTGCATTCGACAAGGCCAGCTGG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223834.2 |
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| CDS CCA 72 bp | TCTGGGAGCCAGCTGGCCTTGTCGAATGCACAGCTGTaGCCTGCTGACAGTGGAAGGTGCTCTGGAGACACA | + |
|
Preference number: 6 (lower is better) Translates to: SGSQLALSNAQL*PADSGRCSGDT Trigger: TGTGTCTCCAGAGCACCTTCCACTGTCAGCAGGCCACAGCTGTGCATTCGACAAGGCCAGCTGGCTCCCAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223834.2 |
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| CDS CCA 72 bp | TCGTCGTTGTTGTTGTCGTCTTTGTCGTCGTCTTCCTaGTCTCCAGCCCAGGGCACGGGCTCCTCCTCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: SSLLLSSLSSSS*SPAQGTGSSSC Trigger: GCAAGAGGAGGAGCCCGTGCCCTGGGCTGGAGACCAGGAAGACGACGACAAAGACGACAACAACAACGACGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223834.2 |
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| CDS GCA 72 bp | TCCTCTCTCTGGGAGTTGGGGCCCTCCCACCTCAGCTaGTGCGAGCCAAACACTCTTTTCAGAACGCTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: SSLWELGPSHLS*CEPNTLFRTLL Trigger: AAGAAGCGTTCTGAAAAGAGTGTTTGGCTCGCAGCAGCTGAGGTGGGAGGGCCCCAACTCCCAGAGAGAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223834.2 |
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| CDS CCA 72 bp | CTTCTCTCTCTGGACGTTGCTGAACACTCTGCCTTCTaGGAGCCAGCTGGCCTTGTCGAATGCACAGCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: LLSLDVAEHSAF*EPAGLVECTAV Trigger: CACAGCTGTGCATTCGACAAGGCCAGCTGGCTCCCAGAAGGCAGAGTGTTCAGCAACGTCCAGAGAGAGAAG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223834.2 |
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| CDS GCA 72 bp | TCGAATGCACAGCTGTGGCCTGCTGACAGTGGAAGGTaGTCTGGAGACACAGGAGCTCTCTGTGTTACTCTG | + |
|
Preference number: 6 (lower is better) Translates to: SNAQLWPADSGR*SGDTGALCVTL Trigger: CAGAGTAACACAGAGAGCTCCTGTGTCTCCAGAGCACCTTCCACTGTCAGCAGGCCACAGCTGTGCATTCGA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223834.2 |
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| CDS CAA 90 bp | ACGCCAGAGGTCTGGAGAGTCGATGTTTCAGGAATCTTTGGCGCCTaGGCTTTCGTTGCGATAGCTTTAGAGGAAGAGGGTCGTTCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: TPEVWRVDVSGIFGA*AFVAIALEEEGRSA Trigger: GGCAGAACGACCCTCTTCCTCTAAAGCTATCGCAACGAAAGCCAAGGCGCCAAAGATTCCTGAAACATCGACTCTCCAGACCTCTGGCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021851.8 ENSMUST00000223834.2 ENSMUST00000225242.2 |
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| CDS CAA 72 bp | TCCGGAGGTTCCACTGCCGCCTTCCAGCTTTCACATTaGGAGAAGGCAAATCTGTGTAGGTCCAGAGTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: SGGSTAAFQLSH*EKANLCRSRVL Trigger: CAACACTCTGGACCTACACAGATTTGCCTTCTCCAAATGTGAAAGCTGGAAGGCGGCAGTGGAACCTCCGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021851.8 ENSMUST00000223834.2 ENSMUST00000225242.2 |
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| CDS CAA 90 bp | ATGGAACTTTCCGGAGGTTCCACTGCCGCCTTCCAGCTTTCACATTaGGAGAAGGCAAATCTGTGTAGGTCCAGAGTGTTGAAAGGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: MELSGGSTAAFQLSH*EKANLCRSRVLKGA Trigger: TGCCCCTTTCAACACTCTGGACCTACACAGATTTGCCTTCTCCAAATGTGAAAGCTGGAAGGCGGCAGTGGAACCTCCGGAAAGTTCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021851.8 ENSMUST00000223834.2 ENSMUST00000225242.2 |
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| CDS CAA 72 bp | TTGAGAAACTTAGAGATGATCTTCTCTCTCTGGACGTaGCTGAACACTCTGCCTTCTGGGAGCCAGCTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: LRNLEMIFSLWT*LNTLPSGSQLA Trigger: GGCCAGCTGGCTCCCAGAAGGCAGAGTGTTCAGCAACGTCCAGAGAGAGAAGATCATCTCTAAGTTTCTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223834.2 |
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| CDS GCA 72 bp | TATCAGACGCTCAATGGAACTTTCCGGAGGTTCCACTaGCGCCTTCCAGCTTTCACATTTGGAGAAGGCAAA | + |
|
Preference number: 6 (lower is better) Translates to: YQTLNGTFRRFH*RLPAFTFGEGK Trigger: TTTGCCTTCTCCAAATGTGAAAGCTGGAAGGCGGCAGTGGAACCTCCGGAAAGTTCCATTGAGCGTCTGATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021851.8 ENSMUST00000223834.2 ENSMUST00000225242.2 |
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| CDS GCA 72 bp | CGATGTTTCAGGAATCTTTGGCGCCTTGGCTTTCGTTaGGATAGCTTTAGAGGAAGAGGGTCGTTCTGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: RCFRNLWRLGFR*DSFRGRGSFCH Trigger: ATGGCAGAACGACCCTCTTCCTCTAAAGCTATCGCAACGAAAGCCAAGGCGCCAAAGATTCCTGAAACATCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021851.8 ENSMUST00000223834.2 ENSMUST00000225242.2 |
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| CDS CAA 90 bp | ACGCTTCTTTTGAGAAACTTAGAGATGATCTTCTCTCTCTGGACGTaGCTGAACACTCTGCCTTCTGGGAGCCAGCTGGCCTTGTCGAAT | + |
|
Preference number: 6 (lower is better) Translates to: TLLLRNLEMIFSLWT*LNTLPSGSQLALSN Trigger: ATTCGACAAGGCCAGCTGGCTCCCAGAAGGCAGAGTGTTCAGCAACGTCCAGAGAGAGAAGATCATCTCTAAGTTTCTCAAAAGAAGCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223834.2 |
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| CDS CAA 90 bp | CACCTCAGCTGCTGCGAGCCAAACACTCTTTTCAGAACGCTTCTTTaGAGAAACTTAGAGATGATCTTCTCTCTCTGGACGTTGCTGAAC | + |
|
Preference number: 6 (lower is better) Translates to: HLSCCEPNTLFRTLL*RNLEMIFSLWTLLN Trigger: GTTCAGCAACGTCCAGAGAGAGAAGATCATCTCTAAGTTTCTCAAAAGAAGCGTTCTGAAAAGAGTGTTTGGCTCGCAGCAGCTGAGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223834.2 |
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| CDS TCA 72 bp | ACAGACCTGCTGGCATTGACTGACCAGGATAAAGAATaGCTTGCTTGCTATCTGCCAAACCCGGAATACTTG | + |
|
Preference number: 6 (lower is better) Translates to: TDLLALTDQDKE*LACYLPNPEYL Trigger: CAAGTATTCCGGGTTTGGCAGATAGCAAGCAAGTCATTCTTTATCCTGGTCAGTCAATGCCAGCAGGTCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021851.8 ENSMUST00000223834.2 |
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| CDS GCA 72 bp | AGTGATTCTCCTGAGAGATGCTTGACACATGCAGGCTaGTGCTGCAGCTCTCATTGCTTTTTCTTCCCATTT | + |
|
Preference number: 6 (lower is better) Translates to: SDSPERCLTHAG*CCSSHCFFFPF Trigger: AAATGGGAAGAAAAAGCAATGAGAGCTGCAGCAGCAGCCTGCATGTGTCAAGCATCTCTCAGGAGAATCACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223834.2 |
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| CDS CCA 72 bp | TTGCTATCTGCCAAACCCGGAATACTTGCTAATAAGTaGTTTACAGTGAAGAGCCTGGGACTGTTGGCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: LLSAKPGILANK*FTVKSLGLLAA Trigger: TGCAGCCAACAGTCCCAGGCTCTTCACTGTAAACCACTTATTAGCAAGTATTCCGGGTTTGGCAGATAGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021851.8 ENSMUST00000223834.2 |
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| CDS TCA 72 bp | TGCGATAGCTTTAGAGGAAGAGGGTCGTTCTGCCATTaGAAACATGGAGCTATAGAAAGTGCTTTGCAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: CDSFRGRGSFCH*KHGAIESALQP Trigger: AGGCTGCAAAGCACTTTCTATAGCTCCATGTTTTCAATGGCAGAACGACCCTCTTCCTCTAAAGCTATCGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021851.8 ENSMUST00000223834.2 ENSMUST00000225242.2 |
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| CDS CAA 72 bp | TGCTGCGAGCCAAACACTCTTTTCAGAACGCTTCTTTaGAGAAACTTAGAGATGATCTTCTCTCTCTGGACG | + |
|
Preference number: 6 (lower is better) Translates to: CCEPNTLFRTLL*RNLEMIFSLWT Trigger: CGTCCAGAGAGAGAAGATCATCTCTAAGTTTCTCAAAAGAAGCGTTCTGAAAAGAGTGTTTGGCTCGCAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223834.2 |
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| CDS CAA 90 bp | GAAGTGGATGAACATTTTAGCAGTGCTCTAGAGTTCGACTTACTTTaGCCAGCACTGCTCAAGCTCCATTTGGAAACATTTTGTTCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: EVDEHFSSALEFDLL*PALLKLHLETFCSG Trigger: GCCAGAACAAAATGTTTCCAAATGGAGCTTGAGCAGTGCTGGCAAAAGTAAGTCGAACTCTAGAGCACTGCTAAAATGTTCATCCACTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021851.8 ENSMUST00000223834.2 ENSMUST00000225242.2 |
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| CDS CAA 72 bp | TTGAAAACATGGAGCTATAGAAAGTGCTTTGCAGCCTaGGCCTCTCTCTCTGTATGGTCATATGCTGTAATC | + |
|
Preference number: 6 (lower is better) Translates to: LKTWSYRKCFAA*ASLSVWSYAVI Trigger: GATTACAGCATATGACCATACAGAGAGAGAGGCCAAGGCTGCAAAGCACTTTCTATAGCTCCATGTTTTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021851.8 ENSMUST00000223834.2 ENSMUST00000225242.2 |
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| CDS TCA 72 bp | TTTAAACTGGAGTTCTTGGAGTTCTTTAGGTCATCATaGGCCACAGCACACTGCTTTGAAGTGGATGAACAT | + |
|
Preference number: 6 (lower is better) Translates to: FKLEFLEFFRSS*ATAHCFEVDEH Trigger: ATGTTCATCCACTTCAAAGCAGTGTGCTGTGGCTCATGATGACCTAAAGAACTCCAAGAACTCCAGTTTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021851.8 ENSMUST00000223834.2 ENSMUST00000225242.2 |
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| CDS CAA 72 bp | GAACATTTTAGCAGTGCTCTAGAGTTCGACTTACTTTaGCCAGCACTGCTCAAGCTCCATTTGGAAACATTT | + |
|
Preference number: 6 (lower is better) Translates to: EHFSSALEFDLL*PALLKLHLETF Trigger: AAATGTTTCCAAATGGAGCTTGAGCAGTGCTGGCAAAAGTAAGTCGAACTCTAGAGCACTGCTAAAATGTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021851.8 ENSMUST00000223834.2 ENSMUST00000225242.2 |
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