Pregenerated sensors for FAM216B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045655Ensembl transcript IDs: ENSMUST00000066437.5, ENSMUST00000118785.3, ENSMUST00000173826.2
Found 80 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTTTCAGATGTGCAGTGGGCAGTGCTCACCCAGGGCTGGAGGTGCTaGCCCTTGTCCCTTCCTGCTGTTCTGCAGTTTTCTCTGGGAGAA | + |
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Preference number: 1 (lower is better) Translates to: FSDVQWAVLTQGWRC*PLSLPAVLQFSLGE Trigger: TTCTCCCAGAGAAAACTGCAGAACAGCAGGAAGGGACAAGGGGCAGCACCTCCAGCCCTGGGTGAGCACTGCCCACTGCACATCTGAAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066437.5 ENSMUST00000118785.3 |
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| 3UTR TCA 90 bp | TGCAGGGAGGCTCTGGATCCGACTCTAAACCCAGGTTTTGCTGGTTaGCCCTTCTTTGCATGGCTGAAGACTCTGGGGAGAATAGTCCTT | + |
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Preference number: 1 (lower is better) Translates to: CREALDPTLNPGFAG*PFFAWLKTLGRIVL Trigger: AAGGACTATTCTCCCCAGAGTCTTCAGCCATGCAAAGAAGGGTCAACCAGCAAAACCTGGGTTTAGAGTCGGATCCAGAGCCTCCCTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173826.2 |
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| 3UTR TCA 90 bp | ATGTTAATGGATGTAGAGAGAAGACAGCCATCACCAAGGAGGGTTTaGGGGATTTCGGTTCTTTCTGAATTTGGCTGGAAAGGGGTCTGG | + |
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Preference number: 1 (lower is better) Translates to: MLMDVERRQPSPRRV*GISVLSEFGWKGVW Trigger: CCAGACCCCTTTCCAGCCAAATTCAGAAAGAACCGAAATCCCTCAAACCCTCCTTGGTGATGGCTGTCTTCTCTCTACATCCATTAACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066437.5 |
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| 3UTR CAA 90 bp | GATGTGCAGTGGGCAGTGCTCACCCAGGGCTGGAGGTGCTGCCCCTaGTCCCTTCCTGCTGTTCTGCAGTTTTCTCTGGGAGAATGGAAC | + |
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Preference number: 2 (lower is better) Translates to: DVQWAVLTQGWRCCP*SLPAVLQFSLGEWN Trigger: GTTCCATTCTCCCAGAGAAAACTGCAGAACAGCAGGAAGGGACAAGGGGCAGCACCTCCAGCCCTGGGTGAGCACTGCCCACTGCACATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066437.5 ENSMUST00000118785.3 |
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| 3UTR-3UTR CCA 90 bp | TCTGTTCTGCTGAGAGTGTTTGTGACTGCTAGGGGCAGGTGTGTGCATGAATTAGTGCTCACCCAGGGCTaGAGGTGCTGCCCCTTGTCC | + |
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Preference number: 2 (lower is better) Translates to: SVLLRVFVTARGRCVHELVLTQG*RCCPLS Trigger: GGACAAGGGGCAGCACCTCCAGCCCTGGGTGAGCAC...TAATTCATGCACACACCTGCCCCTAGCAGTCACAAACACTCTCAGCAGAACAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066437.5 ENSMUST00000118785.3 |
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| 3UTR CAA 90 bp | AGCACAAGACAAGGCCTCCTGTTGAGTGATGTAACCCAGATGCTGTaGGTACCCAAGGCTGTGAATGTAGCGGGTCTGCAGGGCCTTCCA | + |
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Preference number: 2 (lower is better) Translates to: STRQGLLLSDVTQML*VPKAVNVAGLQGLP Trigger: TGGAAGGCCCTGCAGACCCGCTACATTCACAGCCTTGGGTACCAACAGCATCTGGGTTACATCACTCAACAGGAGGCCTTGTCTTGTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173826.2 |
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| 3UTR CAA 90 bp | GTGCAGGGAGGCTCTGGATCCGACTCTAAACCCAGGTTTTGCTGGTaGACCCTTCTTTGCATGGCTGAAGACTCTGGGGAGAATAGTCCT | + |
|
Preference number: 2 (lower is better) Translates to: VQGGSGSDSKPRFCW*TLLCMAEDSGENSP Trigger: AGGACTATTCTCCCCAGAGTCTTCAGCCATGCAAAGAAGGGTCAACCAGCAAAACCTGGGTTTAGAGTCGGATCCAGAGCCTCCCTGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173826.2 |
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| 3UTR-3UTR CCA 90 bp | TGCTCACCCAGGGCTGGAGGTGCTGCCCCTTGTCCCTTCCTGCTGTTCTGCAGTCCAACTTGTTCTTATTaGCAGCATTTATGTGGTGGA | + |
|
Preference number: 2 (lower is better) Translates to: CSPRAGGAAPCPFLLFCSPTCSY*QHLCGG Trigger: TCCACCACATAAATGCTGCCAATAAGAACAAGTTGG...ACTGCAGAACAGCAGGAAGGGACAAGGGGCAGCACCTCCAGCCCTGGGTGAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066437.5 ENSMUST00000118785.3 |
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| 3UTR-3UTR CCA 90 bp | TGCAGTGGGCAGTGCTCACCCAGGGCTGGAGGTGCTGCCCCTTGTCCCTTCCTGTTTTCTCTGGGAGAATaGAACTATAGAAGCTTTTAC | + |
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Preference number: 2 (lower is better) Translates to: CSGQCSPRAGGAAPCPFLFSLGE*NYRSFY Trigger: GTAAAAGCTTCTATAGTTCCATTCTCCCAGAGAAAA...CAGGAAGGGACAAGGGGCAGCACCTCCAGCCCTGGGTGAGCACTGCCCACTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000066437.5 ENSMUST00000118785.3 |
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| 3UTR-3UTR CCA 90 bp | TACAATGAGGGTCTTCAGAAGCTTTGGACAGATCTTATGACTTTGATGTTAATGGTGCTCACCCAGGGCTaGAGGTGCTGCCCCTTGTCC | + |
|
Preference number: 2 (lower is better) Translates to: YNEGLQKLWTDLMTLMLMVLTQG*RCCPLS Trigger: GGACAAGGGGCAGCACCTCCAGCCCTGGGTGAGCAC...CATTAACATCAAAGTCATAAGATCTGTCCAAAGCTTCTGAAGACCCTCATTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066437.5 |
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| 3UTR-3UTR TCA 90 bp | AGGGGCAGGTGTGTGCATGAATTATCTTACCCATGTCAAGGCCAATTGCAGCTGACAACACAAAGTGACTaGGTCAGGCTAGAACCAGAA | + |
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Preference number: 2 (lower is better) Translates to: RGRCVHELSYPCQGQLQLTTQSD*VRLEPE Trigger: TTCTGGTTCTAGCCTGACTCAGTCACTTTGTGTTGT...CAGCTGCAATTGGCCTTGACATGGGTAAGATAATTCATGCACACACCTGCCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066437.5 ENSMUST00000118785.3 |
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| 3UTR-3UTR GCA 90 bp | GCTATCTCATTATTTGCCCATTTGCATGGTCTTGTATATGGTCTTAACATCTTCCAGGGCTGGAGGTGCTaGCCCTTGTCCCTTCCTGCT | + |
|
Preference number: 2 (lower is better) Translates to: AISLFAHLHGLVYGLNIFQGWRC*PLSLPA Trigger: AGCAGGAAGGGACAAGGGGCAGCACCTCCAGCCCTG...GAAGATGTTAAGACCATATACAAGACCATGCAAATGGGCAAATAATGAGATAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066437.5 ENSMUST00000118785.3 |
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| 3UTR-3UTR TCA 90 bp | TCTGTTCTGCTGAGAGTGTTTGTGACTGCTAGGGGCAGGTGTGTGCATGAATTAACAACACAAAGTGACTaGGTCAGGCTAGAACCAGAA | + |
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Preference number: 2 (lower is better) Translates to: SVLLRVFVTARGRCVHELTTQSD*VRLEPE Trigger: TTCTGGTTCTAGCCTGACTCAGTCACTTTGTGTTGT...TAATTCATGCACACACCTGCCCCTAGCAGTCACAAACACTCTCAGCAGAACAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066437.5 ENSMUST00000118785.3 |
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| 3UTR-3UTR TCA 90 bp | ATTCTGTACCAGGAACTAATGCTCACTCAGCAGGGATCTAGGCCAATCAAATTACAATGCTGTGGTATTTaGAAGAGGCTCACCCAGCAG | + |
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Preference number: 2 (lower is better) Translates to: ILYQELMLTQQGSRPIKLQCCGI*KRLTQQ Trigger: CTGCTGGGTGAGCCTCTTTCAAATACCACAGCATTG...TAATTTGATTGGCCTAGATCCCTGCTGAGTGAGCATTAGTTCCTGGTACAGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066437.5 |
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| 3UTR-3UTR TCA 90 bp | ATTGTTATTCTGTACCAGGAACTAATGCTCACTCAGCAGGGATCTAGGCCAATCTCACCAAGGAGGGTTTaGGGGATTTCGGTTCTTTCT | + |
|
Preference number: 2 (lower is better) Translates to: IVILYQELMLTQQGSRPISPRRV*GISVLS Trigger: AGAAAGAACCGAAATCCCTCAAACCCTCCTTGGTGA...GATTGGCCTAGATCCCTGCTGAGTGAGCATTAGTTCCTGGTACAGAATAACAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066437.5 |
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| 3UTR-3UTR GCA 90 bp | AACCAAAGTAAATATTATTGCTTAGTTGGGCTGGGGATAGGAAGAGGCACATGCCCCCTTGTCCCTTCCTaGTGTTCTGCAGTTTTCTCT | + |
|
Preference number: 2 (lower is better) Translates to: NQSKYYCLVGLGIGRGTCPLVPS*CSAVFS Trigger: AGAGAAAACTGCAGAACAGCAGGAAGGGACAAGGGG...GCATGTGCCTCTTCCTATCCCCAGCCCAACTAAGCAATAATATTTACTTTGGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000066437.5 ENSMUST00000118785.3 |
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| 3UTR-3UTR GCA 90 bp | ACAATGCTGTGGTATTTGAAAGAGGCTCACCCAGCAGCTATCTCATTATTTGCCATGTATTTTCAGATGTaGAGTGGGCAGTGCTCACCC | + |
|
Preference number: 2 (lower is better) Translates to: TMLWYLKEAHPAAISLFAMYFQM*SGQCSP Trigger: GGGTGAGCACTGCCCACTGCACATCTGAAAATACAT...GGCAAATAATGAGATAGCTGCTGGGTGAGCCTCTTTCAAATACCACAGCATTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066437.5 ENSMUST00000118785.3 |
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| 3UTR-3UTR TCA 90 bp | ATTGTTATTCTGTACCAGGAACTAATGCTCACTCAGCAGGGATCTAGGCCAATCCAAGAGGCTTCTTCTTaGTTGAGTAAATGGCCCCTT | + |
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Preference number: 2 (lower is better) Translates to: IVILYQELMLTQQGSRPIQEASS*LSKWPL Trigger: AAGGGGCCATTTACTCAATCAAGAAGAAGCCTCTTG...GATTGGCCTAGATCCCTGCTGAGTGAGCATTAGTTCCTGGTACAGAATAACAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066437.5 |
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| 3UTR-3UTR GCA 90 bp | AACCAAAGTAAATATTATTGCTTAGTTGGGCTGGGGATAGGAAGAGGCACATGCATGTATTTTCAGATGTaGAGTGGGCAGTGCTCACCC | + |
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Preference number: 2 (lower is better) Translates to: NQSKYYCLVGLGIGRGTCMYFQM*SGQCSP Trigger: GGGTGAGCACTGCCCACTGCACATCTGAAAATACAT...GCATGTGCCTCTTCCTATCCCCAGCCCAACTAAGCAATAATATTTACTTTGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066437.5 ENSMUST00000118785.3 |
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| 3UTR-3UTR CCA 90 bp | AGGGGCAGGTGTGTGCATGAATTATCTTACCCATGTCAAGGCCAATTGCAGCTGTTCTGCAGTTTTCTCTaGGAGAATGGAACTATAGAA | + |
|
Preference number: 2 (lower is better) Translates to: RGRCVHELSYPCQGQLQLFCSFL*ENGTIE Trigger: TTCTATAGTTCCATTCTCCCAGAGAAAACTGCAGAA...CAGCTGCAATTGGCCTTGACATGGGTAAGATAATTCATGCACACACCTGCCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066437.5 ENSMUST00000118785.3 |
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| 3UTR-3UTR CCA 90 bp | TACAATGAGGGTCTTCAGAAGCTTTGGACAGATCTTATGACTTTGATGTTAATGTTTTCAGATGTGCAGTaGGCAGTGCTCACCCAGGGC | + |
|
Preference number: 2 (lower is better) Translates to: YNEGLQKLWTDLMTLMLMFSDVQ*AVLTQG Trigger: GCCCTGGGTGAGCACTGCCCACTGCACATCTGAAAA...CATTAACATCAAAGTCATAAGATCTGTCCAAAGCTTCTGAAGACCCTCATTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066437.5 |
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| 3UTR-3UTR TCA 90 bp | ATTGTTATTCTGTACCAGGAACTAATGCTCACTCAGCAGGGATCTAGGCCAATCCTCCCTAATCTGTATTaGCTGTGTGGGTTCATGTAT | + |
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Preference number: 2 (lower is better) Translates to: IVILYQELMLTQQGSRPILPNLY*LCGFMY Trigger: ATACATGAACCCACACAGTCAATACAGATTAGGGAG...GATTGGCCTAGATCCCTGCTGAGTGAGCATTAGTTCCTGGTACAGAATAACAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066437.5 |
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| 3UTR-3UTR CCA 90 bp | ATGGTCTTAACATCTTCAGAGATAAGACATGAGATCAATTCTTTGGGGCTATTTTTTTCAGATGTGCAGTaGGCAGTGCTCACCCAGGGC | + |
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Preference number: 2 (lower is better) Translates to: MVLTSSEIRHEINSLGLFFSDVQ*AVLTQG Trigger: GCCCTGGGTGAGCACTGCCCACTGCACATCTGAAAA...AAATAGCCCCAAAGAATTGATCTCATGTCTTATCTCTGAAGATGTTAAGACCAT 43% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000066437.5 ENSMUST00000118785.3 |
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| 3UTR-3UTR GCA 90 bp | CGTAAACTCTACAATGAGGGTCTTCAGAAGCTTTGGACAGATCTTATGACTTTGCTAGGGGCAGGTGTGTaGATGAATTATCTTACCCAT | + |
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Preference number: 2 (lower is better) Translates to: RKLYNEGLQKLWTDLMTLLGAGV*MNYLTH Trigger: ATGGGTAAGATAATTCATGCACACACCTGCCCCTAG...CAAAGTCATAAGATCTGTCCAAAGCTTCTGAAGACCCTCATTGTAGAGTTTACG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066437.5 |
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| 3UTR-3UTR CCA 90 bp | GCTAATACAATGCTGTGGTATTTGAAAGAGGCTCACCCAGCAGCTATCTCATTAATATTATTGCTTAGTTaGGCTGGGGATAGGAAGAGG | + |
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Preference number: 2 (lower is better) Translates to: ANTMLWYLKEAHPAAISLILLLS*AGDRKR Trigger: CCTCTTCCTATCCCCAGCCCAACTAAGCAATAATAT...TAATGAGATAGCTGCTGGGTGAGCCTCTTTCAAATACCACAGCATTGTATTAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066437.5 ENSMUST00000118785.3 |
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| 3UTR-3UTR GCA 90 bp | AACCAAAGTAAATATTATTGCTTAGTTGGGCTGGGGATAGGAAGAGGCACATGCAAGCACCCACTAAAATaGCAAGAATACACAGATGAG | + |
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Preference number: 2 (lower is better) Translates to: NQSKYYCLVGLGIGRGTCKHPLK*QEYTDE Trigger: CTCATCTGTGTATTCTTGGCATTTTAGTGGGTGCTT...GCATGTGCCTCTTCCTATCCCCAGCCCAACTAAGCAATAATATTTACTTTGGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066437.5 ENSMUST00000118785.3 |
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| 3UTR-3UTR GCA 90 bp | ATGGTCTTAACATCTTCAGAGATAAGACATGAGATCAATTCTTTGGGGCTATTTCCCCTTGTCCCTTCCTaGTGTTCTGCAGTTTTCTCT | + |
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Preference number: 2 (lower is better) Translates to: MVLTSSEIRHEINSLGLFPLVPS*CSAVFS Trigger: AGAGAAAACTGCAGAACAGCAGGAAGGGACAAGGGG...AAATAGCCCCAAAGAATTGATCTCATGTCTTATCTCTGAAGATGTTAAGACCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000066437.5 ENSMUST00000118785.3 |
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| 3UTR-3UTR GCA 90 bp | CGGTTCTTTCTGAATTTGGCTGGAAAGGGGTCTGGTAATGTTGAAACATCTTCCGCTAGAACCAGAAACTaGAGAACCAAAGTAAATATT | + |
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Preference number: 2 (lower is better) Translates to: RFFLNLAGKGSGNVETSSARTRN*RTKVNI Trigger: AATATTTACTTTGGTTCTGCAGTTTCTGGTTCTAGC...GGAAGATGTTTCAACATTACCAGACCCCTTTCCAGCCAAATTCAGAAAGAACCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066437.5 |
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| 3UTR-3UTR CCA 90 bp | ACAATGCTGTGGTATTTGAAAGAGGCTCACCCAGCAGCTATCTCATTATTTGCCTCTGTATTGACTGTGTaGGTTCATGTATTTTCAGAT | + |
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Preference number: 2 (lower is better) Translates to: TMLWYLKEAHPAAISLFASVLTV*VHVFSD Trigger: ATCTGAAAATACATGAACCCACACAGTCAATACAGA...GGCAAATAATGAGATAGCTGCTGGGTGAGCCTCTTTCAAATACCACAGCATTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066437.5 ENSMUST00000118785.3 |
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| 3UTR CAA 90 bp | TATATGGTCTTAACATCTTCAGAGATAAGACATGAGATCAATTCTTaGGGGCTATTTTCTGTTCTGCTGAGAGTGTTTGTGACTGCTAGG | + |
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Preference number: 2 (lower is better) Translates to: YMVLTSSEIRHEINS*GLFSVLLRVFVTAR Trigger: CCTAGCAGTCACAAACACTCTCAGCAGAACAGAAAATAGCCCCAAAGAATTGATCTCATGTCTTATCTCTGAAGATGTTAAGACCATATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066437.5 ENSMUST00000118785.3 |
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| 3UTR CAA 90 bp | TATTTGAAAGAGGCTCACCCAGCAGCTATCTCATTATTTGCCCATTaGCATGGTCTTGTATATGGTCTTAACATCTTCAGAGATAAGACA | + |
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Preference number: 2 (lower is better) Translates to: YLKEAHPAAISLFAH*HGLVYGLNIFRDKT Trigger: TGTCTTATCTCTGAAGATGTTAAGACCATATACAAGACCATGCAAATGGGCAAATAATGAGATAGCTGCTGGGTGAGCCTCTTTCAAATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066437.5 ENSMUST00000118785.3 |
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| 3UTR-3UTR TCA 90 bp | TTGAAACATCTTCCTGTTCAGATGAACGTTCCATTTCTCTTGTCAACTAAGTTCCTCCCTAATCTGTATTaGCTGTGTGGGTTCATGTAT | + |
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Preference number: 2 (lower is better) Translates to: LKHLPVQMNVPFLLSTKFLPNLY*LCGFMY Trigger: ATACATGAACCCACACAGTCAATACAGATTAGGGAG...GAACTTAGTTGACAAGAGAAATGGAACGTTCATCTGAACAGGAAGATGTTTCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066437.5 ENSMUST00000118785.3 |
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| 3UTR-3UTR GCA 90 bp | ATTCTGTACCAGGAACTAATGCTCACTCAGCAGGGATCTAGGCCAATCAAATTACAAAGTAAATATTATTaGTTAGTTGGGCTGGGGATA | + |
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Preference number: 2 (lower is better) Translates to: ILYQELMLTQQGSRPIKLQSKYY*LVGLGI Trigger: TATCCCCAGCCCAACTAAGCAATAATATTTACTTTG...TAATTTGATTGGCCTAGATCCCTGCTGAGTGAGCATTAGTTCCTGGTACAGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066437.5 |
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| 3UTR-3UTR CCA 90 bp | CGTAAACTCTACAATGAGGGTCTTCAGAAGCTTTGGACAGATCTTATGACTTTGATGAGATCAATTCTTTaGGGCTATTTTCTGTTCTGC | + |
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Preference number: 2 (lower is better) Translates to: RKLYNEGLQKLWTDLMTLMRSIL*GYFLFC Trigger: GCAGAACAGAAAATAGCCCCAAAGAATTGATCTCAT...CAAAGTCATAAGATCTGTCCAAAGCTTCTGAAGACCCTCATTGTAGAGTTTACG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066437.5 |
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| 3UTR-3UTR TCA 90 bp | TTGAAACATCTTCCTGTTCAGATGAACGTTCCATTTCTCTTGTCAACTAAGTTCTTCAGAGATAAGACATaGGATCAATTCTTTGGGGCT | + |
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Preference number: 2 (lower is better) Translates to: LKHLPVQMNVPFLLSTKFFRDKT*DQFFGA Trigger: AGCCCCAAAGAATTGATCTCATGTCTTATCTCTGAA...GAACTTAGTTGACAAGAGAAATGGAACGTTCATCTGAACAGGAAGATGTTTCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066437.5 ENSMUST00000118785.3 |
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| 3UTR-3UTR CCA 90 bp | GCTATCTCATTATTTGCCCATTTGCATGGTCTTGTATATGGTCTTAACATCTTCCCAACTTGTTCTTATTaGCAGCATTTATGTGGTGGA | + |
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Preference number: 2 (lower is better) Translates to: AISLFAHLHGLVYGLNIFPTCSY*QHLCGG Trigger: TCCACCACATAAATGCTGCCAATAAGAACAAGTTGG...GAAGATGTTAAGACCATATACAAGACCATGCAAATGGGCAAATAATGAGATAGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066437.5 ENSMUST00000118785.3 |
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| 3UTR-3UTR GCA 90 bp | ATGGTCTTAACATCTTCAGAGATAAGACATGAGATCAATTCTTTGGGGCTATTTAAGCACCCACTAAAATaGCAAGAATACACAGATGAG | + |
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Preference number: 2 (lower is better) Translates to: MVLTSSEIRHEINSLGLFKHPLK*QEYTDE Trigger: CTCATCTGTGTATTCTTGGCATTTTAGTGGGTGCTT...AAATAGCCCCAAAGAATTGATCTCATGTCTTATCTCTGAAGATGTTAAGACCAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066437.5 ENSMUST00000118785.3 |
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| 3UTR-3UTR GCA 90 bp | TTGAAACATCTTCCTGTTCAGATGAACGTTCCATTTCTCTTGTCAACTAAGTTCAGCTATCTCATTATTTaGCCATTTGCATGGTCTTGT | + |
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Preference number: 2 (lower is better) Translates to: LKHLPVQMNVPFLLSTKFSYLII*PFAWSC Trigger: ACAAGACCATGCAAATGGGCAAATAATGAGATAGCT...GAACTTAGTTGACAAGAGAAATGGAACGTTCATCTGAACAGGAAGATGTTTCAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066437.5 ENSMUST00000118785.3 |
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| 3UTR-3UTR CCA 90 bp | GCTATCTCATTATTTGCCCATTTGCATGGTCTTGTATATGGTCTTAACATCTTCATGAGATCAATTCTTTaGGGCTATTTTCTGTTCTGC | + |
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Preference number: 2 (lower is better) Translates to: AISLFAHLHGLVYGLNIFMRSIL*GYFLFC Trigger: GCAGAACAGAAAATAGCCCCAAAGAATTGATCTCAT...GAAGATGTTAAGACCATATACAAGACCATGCAAATGGGCAAATAATGAGATAGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066437.5 ENSMUST00000118785.3 |
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| 3UTR-3UTR CCA 90 bp | TTGAAACATCTTCCTGTTCAGATGAACGTTCCATTTCTCTTGTCAACTAAGTTCTTTTCTCTGGGAGAATaGAACTATAGAAGCTTTTAC | + |
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Preference number: 2 (lower is better) Translates to: LKHLPVQMNVPFLLSTKFFSLGE*NYRSFY Trigger: GTAAAAGCTTCTATAGTTCCATTCTCCCAGAGAAAA...GAACTTAGTTGACAAGAGAAATGGAACGTTCATCTGAACAGGAAGATGTTTCAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066437.5 ENSMUST00000118785.3 |
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| 3UTR-3UTR CCA 90 bp | TTGAAACATCTTCCTGTTCAGATGAACGTTCCATTTCTCTTGTCAACTAAGTTCTCTGTATTGACTGTGTaGGTTCATGTATTTTCAGAT | + |
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Preference number: 2 (lower is better) Translates to: LKHLPVQMNVPFLLSTKFSVLTV*VHVFSD Trigger: ATCTGAAAATACATGAACCCACACAGTCAATACAGA...GAACTTAGTTGACAAGAGAAATGGAACGTTCATCTGAACAGGAAGATGTTTCAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066437.5 ENSMUST00000118785.3 |
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| 3UTR CCA 72 bp | TTTTCAGATGTGCAGTGGGCAGTGCTCACCCAGGGCTaGAGGTGCTGCCCCTTGTCCCTTCCTGCTGTTCTG | + |
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Preference number: 3 (lower is better) Translates to: FSDVQWAVLTQG*RCCPLSLPAVL Trigger: CAGAACAGCAGGAAGGGACAAGGGGCAGCACCTCCAGCCCTGGGTGAGCACTGCCCACTGCACATCTGAAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066437.5 ENSMUST00000118785.3 |
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| 3UTR CCA 72 bp | GTCAAAGGTGAGTACTGCTTTCCCAAGACTTCCCAATaGACTGGTGGGACGCCGATGCCCCTTGCCCCACCC | + |
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Preference number: 3 (lower is better) Translates to: VKGEYCFPKTSQ*TGGTPMPLAPP Trigger: GGGTGGGGCAAGGGGCATCGGCGTCCCACCAGTCCATTGGGAAGTCTTGGGAAAGCAGTACTCACCTTTGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066437.5 |
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| 3UTR GCA 72 bp | TGTGGGTTCATGTATTTTCAGATGTGCAGTGGGCAGTaGTCACCCAGGGCTGGAGGTGCTGCCCCTTGTCCC | + |
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Preference number: 3 (lower is better) Translates to: CGFMYFQMCSGQ*SPRAGGAAPCP Trigger: GGGACAAGGGGCAGCACCTCCAGCCCTGGGTGAGCACTGCCCACTGCACATCTGAAAATACATGAACCCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066437.5 ENSMUST00000118785.3 |
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| 3UTR-3UTR CAA 90 bp | TGCAGTGGGCAGTGCTCACCCAGGGCTGGAGGTGCTGCCCCTTGTCCCTTCCTGTCCAACTTGTTCTTATaGGCAGCATTTATGTGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: CSGQCSPRAGGAAPCPFLSNLFL*AAFMWW Trigger: CCACCACATAAATGCTGCCAATAAGAACAAGTTGGA...CAGGAAGGGACAAGGGGCAGCACCTCCAGCCCTGGGTGAGCACTGCCCACTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066437.5 ENSMUST00000118785.3 |
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| 3UTR GCA 72 bp | CACCCAGGGCTGGAGGTGCTGCCCCTTGTCCCTTCCTaGTGTTCTGCAGTTTTCTCTGGGAGAATGGAACTA | + |
|
Preference number: 3 (lower is better) Translates to: HPGLEVLPLVPS*CSAVFSGRMEL Trigger: TAGTTCCATTCTCCCAGAGAAAACTGCAGAACAGCAGGAAGGGACAAGGGGCAGCACCTCCAGCCCTGGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066437.5 ENSMUST00000118785.3 |
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| 3UTR-3UTR CAA 90 bp | AGGGGCAGGTGTGTGCATGAATTATCTTACCCATGTCAAGGCCAATTGCAGCTGTGGAGGTGCTGCCCCTaGTCCCTTCCTGCTGTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: RGRCVHELSYPCQGQLQLWRCCP*SLPAVL Trigger: CAGAACAGCAGGAAGGGACAAGGGGCAGCACCTCCA...CAGCTGCAATTGGCCTTGACATGGGTAAGATAATTCATGCACACACCTGCCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066437.5 ENSMUST00000118785.3 |
||
| 3UTR GCA 72 bp | TATGCCTTGTCTAAGGTCTTGGTGCTCAGCATGCTGTaGAGGGAGGCTCTGGATCCGACTCTAAACCCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: YALSKVLVLSML*REALDPTLNPG Trigger: ACCTGGGTTTAGAGTCGGATCCAGAGCCTCCCTGCACAGCATGCTGAGCACCAAGACCTTAGACAAGGCATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173826.2 |
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| 3UTR-3UTR CAA 90 bp | TCTGTTCTGCTGAGAGTGTTTGTGACTGCTAGGGGCAGGTGTGTGCATGAATTATGGAGGTGCTGCCCCTaGTCCCTTCCTGCTGTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: SVLLRVFVTARGRCVHELWRCCP*SLPAVL Trigger: CAGAACAGCAGGAAGGGACAAGGGGCAGCACCTCCA...TAATTCATGCACACACCTGCCCCTAGCAGTCACAAACACTCTCAGCAGAACAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066437.5 ENSMUST00000118785.3 |
||
| 3UTR GCA 72 bp | GCTGGAGGTGCTGCCCCTTGTCCCTTCCTGCTGTTCTaGAGTTTTCTCTGGGAGAATGGAACTATAGAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: AGGAAPCPFLLF*SFLWENGTIEA Trigger: AGCTTCTATAGTTCCATTCTCCCAGAGAAAACTGCAGAACAGCAGGAAGGGACAAGGGGCAGCACCTCCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066437.5 ENSMUST00000118785.3 |
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| 3UTR GCA 72 bp | CAGGGAGGCTCTGGATCCGACTCTAAACCCAGGTTTTaGTGGTTGACCCTTCTTTGCATGGCTGAAGACTCT | + |
|
Preference number: 3 (lower is better) Translates to: QGGSGSDSKPRF*WLTLLCMAEDS Trigger: AGAGTCTTCAGCCATGCAAAGAAGGGTCAACCAGCAAAACCTGGGTTTAGAGTCGGATCCAGAGCCTCCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173826.2 |
||
| 3UTR GCA 72 bp | GACTCTAAACCCAGGTTTTGCTGGTTGACCCTTCTTTaGATGGCTGAAGACTCTGGGGAGAATAGTCCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: DSKPRFCWLTLL*MAEDSGENSPL Trigger: CAAAGGACTATTCTCCCCAGAGTCTTCAGCCATGCAAAGAAGGGTCAACCAGCAAAACCTGGGTTTAGAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173826.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTGTTCTGCTGAGAGTGTTTGTGACTGCTAGGGGCAGGTGTGTGCATGAATTATCCAACTTGTTCTTATaGGCAGCATTTATGTGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: SVLLRVFVTARGRCVHELSNLFL*AAFMWW Trigger: CCACCACATAAATGCTGCCAATAAGAACAAGTTGGA...TAATTCATGCACACACCTGCCCCTAGCAGTCACAAACACTCTCAGCAGAACAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066437.5 ENSMUST00000118785.3 |
||
| 3UTR TCA 72 bp | GATGTAGAGAGAAGACAGCCATCACCAAGGAGGGTTTaGGGGATTTCGGTTCTTTCTGAATTTGGCTGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: DVERRQPSPRRV*GISVLSEFGWK Trigger: TTTCCAGCCAAATTCAGAAAGAACCGAAATCCCTCAAACCCTCCTTGGTGATGGCTGTCTTCTCTCTACATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066437.5 |
||
| 3UTR TCA 72 bp | ATCACCAAGGAGGGTTTGAGGGATTTCGGTTCTTTCTaGATTTGGCTGGAAAGGGGTCTGGTAATGTTGAAA | + |
|
Preference number: 3 (lower is better) Translates to: ITKEGLRDFGSF*IWLERGLVMLK Trigger: TTTCAACATTACCAGACCCCTTTCCAGCCAAATTCAGAAAGAACCGAAATCCCTCAAACCCTCCTTGGTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066437.5 |
||
| 3UTR TCA 72 bp | ACAGGAGTTGCTGTTGTCAAGAGGCTTCTTCTTGATTaGGTAAATGGCCCCTTAGTCTCTCCTGTTAATGAT | + |
|
Preference number: 3 (lower is better) Translates to: TGVAVVKRLLLD*VNGPLVSPVND Trigger: ATCATTAACAGGAGAGACTAAGGGGCCATTTACTCAATCAAGAAGAAGCCTCTTGACAACAGCAACTCCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066437.5 |
||
| 3UTR GCA 72 bp | AGGCTCACCCAGCAGCTATCTCATTATTTGCCCATTTaGATGGTCTTGTATATGGTCTTAACATCTTCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: RLTQQLSHYLPI*MVLYMVLTSSE Trigger: CTCTGAAGATGTTAAGACCATATACAAGACCATGCAAATGGGCAAATAATGAGATAGCTGCTGGGTGAGCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066437.5 ENSMUST00000118785.3 |
||
| 3UTR CCA 72 bp | GCTCAATCGCTTTCAGATCTTCCAACTTGTTCTTATTaGCAGCATTTATGTGGTGGAGGGATTATGTGTAGG | + |
|
Preference number: 3 (lower is better) Translates to: AQSLSDLPTCSY*QHLCGGGIMCR Trigger: CCTACACATAATCCCTCCACCACATAAATGCTGCCAATAAGAACAAGTTGGAAGATCTGAAAGCGATTGAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066437.5 ENSMUST00000118785.3 |
||
| 3UTR-3UTR CAA 90 bp | CGGTTCTTTCTGAATTTGGCTGGAAAGGGGTCTGGTAATGTTGAAACATCTTCCCATGAGATCAATTCTTaGGGGCTATTTTCTGTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: RFFLNLAGKGSGNVETSSHEINS*GLFSVL Trigger: CAGAACAGAAAATAGCCCCAAAGAATTGATCTCATG...GGAAGATGTTTCAACATTACCAGACCCCTTTCCAGCCAAATTCAGAAAGAACCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000066437.5 |
||
| 3UTR TCA 72 bp | TCCCAACTGATTTCTTCATGTGGTGACCGACAGACATaGCTGGCTGATAGGAATGACATGTTTTTAAAAGAC | + |
|
Preference number: 3 (lower is better) Translates to: SQLISSCGDRQT*LADRNDMFLKD Trigger: GTCTTTTAAAAACATGTCATTCCTATCAGCCAGTCATGTCTGTCGGTCACCACATGAAGAAATCAGTTGGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066437.5 ENSMUST00000118785.3 |
||
| 3UTR CCA 72 bp | TCCCTTCCTGCTGTTCTGCAGTTTTCTCTGGGAGAATaGAACTATAGAAGCTTTTACACTGAAAGCTTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: SLPAVLQFSLGE*NYRSFYTESFE Trigger: TTCAAAGCTTTCAGTGTAAAAGCTTCTATAGTTCCATTCTCCCAGAGAAAACTGCAGAACAGCAGGAAGGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066437.5 ENSMUST00000118785.3 |
||
| 3UTR CCA 72 bp | AGAAAGTCACTACTGAACATAGCTAATACAATGCTGTaGTATTTGAAAGAGGCTCACCCAGCAGCTATCTCA | + |
|
Preference number: 3 (lower is better) Translates to: RKSLLNIANTML*YLKEAHPAAIS Trigger: TGAGATAGCTGCTGGGTGAGCCTCTTTCAAATACCACAGCATTGTATTAGCTATGTTCAGTAGTGACTTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066437.5 ENSMUST00000118785.3 |
||
| CDS-3UTR GCA 90 bp | TGCAGTGGGCAGTGCTCACCCAGGGCTGGAGGTGCTGCCCCTTGTCCCTTCCTGTGGTTGACCCTTCTTTaGATGGCTGAAGACTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: CSGQCSPRAGGAAPCPFLWLTLL*MAEDSG Trigger: CCCAGAGTCTTCAGCCATGCAAAGAAGGGTCAACCA...CAGGAAGGGACAAGGGGCAGCACCTCCAGCCCTGGGTGAGCACTGCCCACTGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066437.5 ENSMUST00000118785.3 |
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| CDS-3UTR CCA 90 bp | TGCTCACCCAGGGCTGGAGGTGCTGCCCCTTGTCCCTTCCTGCTGTTCTGCAGTCCTTGTCTAAGGTCTTaGTGCTCAGCATGCTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: CSPRAGGAAPCPFLLFCSPCLRS*CSACCA Trigger: TGCACAGCATGCTGAGCACCAAGACCTTAGACAAGG...ACTGCAGAACAGCAGGAAGGGACAAGGGGCAGCACCTCCAGCCCTGGGTGAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066437.5 ENSMUST00000118785.3 |
||
| 3UTR CAA 72 bp | CAAGGCCTCCTGTTGAGTGATGTAACCCAGATGCTGTaGGTACCCAAGGCTGTGAATGTAGCGGGTCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QGLLLSDVTQML*VPKAVNVAGLQ Trigger: CTGCAGACCCGCTACATTCACAGCCTTGGGTACCAACAGCATCTGGGTTACATCACTCAACAGGAGGCCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173826.2 |
||
| CDS-3UTR GCA 90 bp | TTGCTTAGTTGGGCTGGGGATAGGAAGAGGCACATGCCACTTATCACTAACATTGTGCTCAGCATGCTGTaGAGGGAGGCTCTGGATCCG | + |
|
Preference number: 4 (lower is better) Translates to: LLSWAGDRKRHMPLITNIVLSML*REALDP Trigger: CGGATCCAGAGCCTCCCTGCACAGCATGCTGAGCAC...AATGTTAGTGATAAGTGGCATGTGCCTCTTCCTATCCCCAGCCCAACTAAGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066437.5 ENSMUST00000118785.3 |
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| CDS-3UTR GCA 90 bp | AGGGGCAGGTGTGTGCATGAATTATCTTACCCATGTCAAGGCCAATTGCAGCTGTGGTTGACCCTTCTTTaGATGGCTGAAGACTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RGRCVHELSYPCQGQLQLWLTLL*MAEDSG Trigger: CCCAGAGTCTTCAGCCATGCAAAGAAGGGTCAACCA...CAGCTGCAATTGGCCTTGACATGGGTAAGATAATTCATGCACACACCTGCCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066437.5 ENSMUST00000118785.3 |
||
| 3UTR CAA 72 bp | ATGTCTAAGCACAGCAGCACAAGACAAGGCCTCCTGTaGAGTGATGTAACCCAGATGCTGTTGGTACCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: MSKHSSTRQGLL*SDVTQMLLVPK Trigger: CTTGGGTACCAACAGCATCTGGGTTACATCACTCAACAGGAGGCCTTGTCTTGTGCTGCTGTGCTTAGACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173826.2 |
||
| CDS-3UTR GCA 90 bp | GCTAGGGGCAGGTGTGTGCATGAATTATCTTACCCATGTCAAGGCCAATTGCAGTCTAAACCCAGGTTTTaGTGGTTGACCCTTCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: ARGRCVHELSYPCQGQLQSKPRF*WLTLLC Trigger: GCAAAGAAGGGTCAACCAGCAAAACCTGGGTTTAGA...CTGCAATTGGCCTTGACATGGGTAAGATAATTCATGCACACACCTGCCCCTAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066437.5 ENSMUST00000118785.3 |
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| CDS-3UTR GCA 90 bp | TCTGTTCTGCTGAGAGTGTTTGTGACTGCTAGGGGCAGGTGTGTGCATGAATTATCTAAACCCAGGTTTTaGTGGTTGACCCTTCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SVLLRVFVTARGRCVHELSKPRF*WLTLLC Trigger: GCAAAGAAGGGTCAACCAGCAAAACCTGGGTTTAGA...TAATTCATGCACACACCTGCCCCTAGCAGTCACAAACACTCTCAGCAGAACAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066437.5 ENSMUST00000118785.3 |
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| CDS-3UTR CCA 90 bp | AACCAAAGTAAATATTATTGCTTAGTTGGGCTGGGGATAGGAAGAGGCACATGCCCTTGTCTAAGGTCTTaGTGCTCAGCATGCTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: NQSKYYCLVGLGIGRGTCPCLRS*CSACCA Trigger: TGCACAGCATGCTGAGCACCAAGACCTTAGACAAGG...GCATGTGCCTCTTCCTATCCCCAGCCCAACTAAGCAATAATATTTACTTTGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066437.5 ENSMUST00000118785.3 |
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| 3UTR CAA 72 bp | TGTGTGCATGAATTATCTTACCCATGTCAAGGCCAATaGCAGCTGTATAGAGTCATCCTGGCAGTAATAGGC | + |
|
Preference number: 4 (lower is better) Translates to: CVHELSYPCQGQ*QLYRVILAVIG Trigger: GCCTATTACTGCCAGGATGACTCTATACAGCTGCAATTGGCCTTGACATGGGTAAGATAATTCATGCACACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066437.5 ENSMUST00000118785.3 |
||
| 3UTR CAA 72 bp | CAAGGAGGGTTTGAGGGATTTCGGTTCTTTCTGAATTaGGCTGGAAAGGGGTCTGGTAATGTTGAAACATCT | + |
|
Preference number: 4 (lower is better) Translates to: QGGFEGFRFFLN*AGKGSGNVETS Trigger: AGATGTTTCAACATTACCAGACCCCTTTCCAGCCAAATTCAGAAAGAACCGAAATCCCTCAAACCCTCCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066437.5 |
||
| 3UTR CAA 72 bp | GAGGCTCACCCAGCAGCTATCTCATTATTTGCCCATTaGCATGGTCTTGTATATGGTCTTAACATCTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: EAHPAAISLFAH*HGLVYGLNIFR Trigger: TCTGAAGATGTTAAGACCATATACAAGACCATGCAAATGGGCAAATAATGAGATAGCTGCTGGGTGAGCCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066437.5 ENSMUST00000118785.3 |
||
| CDS-3UTR TCA 90 bp | GCTAATACAATGCTGTGGTATTTGAAAGAGGCTCACCCAGCAGCTATCTCATTAAGTCATAAATCCTCATaGTGCTGTACAAGTAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: ANTMLWYLKEAHPAAISLSHKSS*CCTSST Trigger: GGTGCTACTTGTACAGCATCATGAGGATTTATGACT...TAATGAGATAGCTGCTGGGTGAGCCTCTTTCAAATACCACAGCATTGTATTAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066437.5 |
||
| 3UTR CAA 72 bp | CTTATTCACTGCTCAATCGCTTTCAGATCTTCCAACTaGTTCTTATTGGCAGCATTTATGTGGTGGAGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LIHCSIAFRSSN*FLLAAFMWWRD Trigger: ATCCCTCCACCACATAAATGCTGCCAATAAGAACAAGTTGGAAGATCTGAAAGCGATTGAGCAGTGAATAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066437.5 ENSMUST00000118785.3 |
||
| 3UTR CAA 72 bp | GAGGGTCTTCAGAAGCTTTGGACAGATCTTATGACTTaGATGTTAATGGATGTAGAGAGAAGACAGCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: EGLQKLWTDLMT*MLMDVERRQPS Trigger: TGATGGCTGTCTTCTCTCTACATCCATTAACATCAAAGTCATAAGATCTGTCCAAAGCTTCTGAAGACCCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066437.5 |
||
| 3UTR CAA 72 bp | TTAACATCTTCAGAGATAAGACATGAGATCAATTCTTaGGGGCTATTTTCTGTTCTGCTGAGAGTGTTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LTSSEIRHEINS*GLFSVLLRVFV Trigger: CACAAACACTCTCAGCAGAACAGAAAATAGCCCCAAAGAATTGATCTCATGTCTTATCTCTGAAGATGTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066437.5 ENSMUST00000118785.3 |
||
| CDS-3UTR CAA 90 bp | GTGGCTGAGGCTCGCATGGTTGAATGTCTAAGCACAGCAGCACAAGACAAGGCCACCTTCAGTAATGAATaGTCAGCAGCCGCTGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: VAEARMVECLSTAAQDKATFSNE*SAAAAG Trigger: CCCAGCAGCGGCTGCTGACAATTCATTACTGAAGGT...GGCCTTGTCTTGTGCTGCTGTGCTTAGACATTCAACCATGCGAGCCTCAGCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173826.2 |
||
| CDS-3UTR CAA 90 bp | ATTGTTATTCTGTACCAGGAACTAATGCTCACTCAGCAGGGATCTAGGCCAATCTCCTTCAGTAATGAATaGTCAGCAGCCGCTGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: IVILYQELMLTQQGSRPISFSNE*SAAAAG Trigger: CCCAGCAGCGGCTGCTGACAATTCATTACTGAAGGA...GATTGGCCTAGATCCCTGCTGAGTGAGCATTAGTTCCTGGTACAGAATAACAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066437.5 |
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