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Pregenerated sensors for FAM216A (Mus musculus)

Ensembl gene IDs: ENSMUSG00000029463

Ensembl transcript IDs: ENSMUST00000031419.6

Found 14 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS TCA 90 bp CTGCTCGCCAGTGCCCTTGGAATTCTGGGGATAAGAATGTCCAGCTaGTCCTTCACCGCCTTCCGTCCGGGCCAAGGCGGGCGGCCCCGC +
Preference number: 5 (lower is better)
Translates to: LLASALGILGIRMSS*SFTAFRPGQGGRPR
Trigger: GCGGGGCCGCCCGCCTTGGCCCGGACGGAAGGCGGTGAAGGATCAGCTGGACATTCTTATCCCCAGAATTCCAAGGGCACTGGCGAGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031419.6
CDS GCA 90 bp GGCTGGCGTGAGCTGGGCCTTGTTCTTGGATGGACATGGACTGCATaGACTTATTCAGCAGATCCTCCTCCTGTGTTTCTTCACTCGGGC +
Preference number: 5 (lower is better)
Translates to: GWRELGLVLGWTWTA*TYSADPPPVFLHSG
Trigger: GCCCGAGTGAAGAAACACAGGAGGAGGATCTGCTGAATAAGTGCATGCAGTCCATGTCCATCCAAGAACAAGGCCCAGCTCACGCCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031419.6
CDS GCA 90 bp CAGGGGTCGCCAAAGGGAATGTATGATCATTTCAGGTGCTCCAGCTaGAATGCTCAGAGAGTCCTCTCTCTCCAGATGGTGTCTCCATGC +
Preference number: 5 (lower is better)
Translates to: QGSPKGMYDHFRCSS*NAQRVLSLQMVSPC
Trigger: GCATGGAGACACCATCTGGAGAGAGAGGACTCTCTGAGCATTGCAGCTGGAGCACCTGAAATGATCATACATTCCCTTTGGCGACCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031419.6
CDS CCA 90 bp AGACCGTCAGGCTGGCGTGAGCTGGGCCTTGTTCTTGGATGGACATaGACTGCATGCACTTATTCAGCAGATCCTCCTCCTGTGTTTCTT +
Preference number: 5 (lower is better)
Translates to: RPSGWRELGLVLGWT*TACTYSADPPPVFL
Trigger: AAGAAACACAGGAGGAGGATCTGCTGAATAAGTGCATGCAGTCCATGTCCATCCAAGAACAAGGCCCAGCTCACGCCAGCCTGACGGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031419.6
CDS TCA 90 bp GCTGTTTCTGTGAGTAGCGAGAGCTCATATGGCCTCTGTGGTGAGTaGGCACACCTGTCTTCTGTGACCCGTGATGAAATATGTGCATGT +
Preference number: 5 (lower is better)
Translates to: AVSVSSESSYGLCGE*AHLSSVTRDEICAC
Trigger: ACATGCACATATTTCATCACGGGTCACAGAAGACAGGTGTGCTCACTCACCACAGAGGCCATATGAGCTCTCGCTACTCACAGAAACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031419.6
CDS TCA 90 bp TTATTCAGCAGATCCTCCTCCTGTGTTTCTTCACTCGGGCATGACTaGGAATCATTAGAAGGAACTGGTAACAAGAACAGTCTGCCTGGT +
Preference number: 5 (lower is better)
Translates to: LFSRSSSCVSSLGHD*ESLEGTGNKNSLPG
Trigger: ACCAGGCAGACTGTTCTTGTTACCAGTTCCTTCTAATGATTCTCAGTCATGCCCGAGTGAAGAAACACAGGAGGAGGATCTGCTGAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031419.6
CDS CAA 72 bp CTAGACCGTCAGGCTGGCGTGAGCTGGGCCTTGTTCTaGGATGGACATGGACTGCATGCACTTATTCAGCAG +
Preference number: 6 (lower is better)
Translates to: LDRQAGVSWALF*DGHGLHALIQQ
Trigger: CTGCTGAATAAGTGCATGCAGTCCATGTCCATCCAAGAACAAGGCCCAGCTCACGCCAGCCTGACGGTCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031419.6
CDS TCA 72 bp GTGTCTCCATGCAGTACAGGGGGAATGCTGTTTCTGTaGGTAGCGAGAGCTCATATGGCCTCTGTGGTGAGT +
Preference number: 6 (lower is better)
Translates to: VSPCSTGGMLFL*VARAHMASVVS
Trigger: ACTCACCACAGAGGCCATATGAGCTCTCGCTACTCACAGAAACAGCATTCCCCCTGTACTGCATGGAGACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000031419.6
CDS CAA 72 bp AGTTTGGCAATGTGTGCGTACACTCTGTGTCCCTCCTaGATTCTGTCTGCTTTATGCTGCTCGCCAGTGCCC +
Preference number: 6 (lower is better)
Translates to: SLAMCAYTLCPS*ILSALCCSPVP
Trigger: GGGCACTGGCGAGCAGCATAAAGCAGACAGAATCAAGGAGGGACACAGAGTGTACGCACACATTGCCAAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031419.6
CDS CAA 90 bp AACTCCTGCAGTTTGGCAATGTGTGCGTACACTCTGTGTCCCTCCTaGATTCTGTCTGCTTTATGCTGCTCGCCAGTGCCCTTGGAATTC +
Preference number: 6 (lower is better)
Translates to: NSCSLAMCAYTLCPS*ILSALCCSPVPLEF
Trigger: GAATTCCAAGGGCACTGGCGAGCAGCATAAAGCAGACAGAATCAAGGAGGGACACAGAGTGTACGCACACATTGCCAAACTGCAGGAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031419.6
CDS TCA 72 bp ATGGCCTCTGTGGTGAGTGAGCACACCTGTCTTCTGTaGCCCGTGATGAAATATGTGCATGTACTGCCTCTT +
Preference number: 6 (lower is better)
Translates to: MASVVSEHTCLL*PVMKYVHVLPL
Trigger: AAGAGGCAGTACATGCACATATTTCATCACGGGTCACAGAAGACAGGTGTGCTCACTCACCACAGAGGCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031419.6
CDS GCA 72 bp CCAAAGGGAATGTATGATCATTTCAGGTGCTCCAGCTaGAATGCTCAGAGAGTCCTCTCTCTCCAGATGGTG +
Preference number: 6 (lower is better)
Translates to: PKGMYDHFRCSS*NAQRVLSLQMV
Trigger: CACCATCTGGAGAGAGAGGACTCTCTGAGCATTGCAGCTGGAGCACCTGAAATGATCATACATTCCCTTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031419.6
CDS GCA 72 bp GAGCTGGGCCTTGTTCTTGGATGGACATGGACTGCATaGACTTATTCAGCAGATCCTCCTCCTGTGTTTCTT +
Preference number: 6 (lower is better)
Translates to: ELGLVLGWTWTA*TYSADPPPVFL
Trigger: AAGAAACACAGGAGGAGGATCTGCTGAATAAGTGCATGCAGTCCATGTCCATCCAAGAACAAGGCCCAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031419.6
CDS TCA 72 bp AGATCCTCCTCCTGTGTTTCTTCACTCGGGCATGACTaGGAATCATTAGAAGGAACTGGTAACAAGAACAGT +
Preference number: 6 (lower is better)
Translates to: RSSSCVSSLGHD*ESLEGTGNKNS
Trigger: ACTGTTCTTGTTACCAGTTCCTTCTAATGATTCTCAGTCATGCCCGAGTGAAGAAACACAGGAGGAGGATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031419.6