RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAM214A (Mus musculus)

Ensembl gene IDs: ENSMUSG00000034858

Ensembl transcript IDs: ENSMUST00000081746.7, ENSMUST00000170846.8, ENSMUST00000214755.2, ENSMUST00000215370.2

Found 353 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGTTTAACAGGAACTGAGAACGTCCTCTGTCTCAGGAATGTCTGGTaGTTGGCTGGCATACCTCGTAGGTCATACACGACTACAAACATC +
Preference number: 1 (lower is better)
Translates to: CLTGTENVLCLRNVW*LAGIPRRSYTTTNI
Trigger: GATGTTTGTAGTCGTGTATGACCTACGAGGTATGCCAGCCAATCACCAGACATTCCTGAGACAGAGGACGTTCTCAGTTCCTGTTAAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214755.2
3UTR GCA 90 bp CACTCTGCTCCGCTGGCTCTCGTTCGATGTATTCCATTCTGTGAATaGTCATGTTCAGGCTTGGGTACTGAGCAAATACTTTTAAGTTGT +
Preference number: 1 (lower is better)
Translates to: HSAPLALVRCIPFCE*SCSGLGTEQILLSC
Trigger: ACAACTTAAAAGTATTTGCTCAGTACCCAAGCCTGAACATGAGCATTCACAGAATGGAATACATCGAACGAGAGCCAGCGGAGCAGAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
3UTR TCA 90 bp GTTCTCTTTGTTAATACTTCTCTTCATCTCTTGTTTAACAGGAACTaGGAACGTCCTCTGTCTCAGGAATGTCTGGTGATTGGCTGGCAT +
Preference number: 1 (lower is better)
Translates to: VLFVNTSLHLLFNRN*ERPLSQECLVIGWH
Trigger: ATGCCAGCCAATCACCAGACATTCCTGAGACAGAGGACGTTCTCAGTTCCTGTTAAACAAGAGATGAAGAGAAGTATTAACAAAGAGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214755.2
3UTR-3UTR GCA 90 bp CTCAGCGCTTGCCAGGAGGATGGGAGCAGCTTTGTCGGACCCCCTGGGGACAGAATTCCATTCTGTGAATaGTCATGTTCAGGCTTGGGT +
Preference number: 2 (lower is better)
Translates to: LSACQEDGSSFVGPPGDRIPFCE*SCSGLG
Trigger: ACCCAAGCCTGAACATGAGCATTCACAGAATGGAAT...TCTGTCCCCAGGGGGTCCGACAAAGCTGCTCCCATCCTCCTGGCAAGCGCTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000170846.8
ENSMUST00000215370.2
3UTR-3UTR GCA 90 bp TCAGCGCTTGCCAGGAGGATGGGAGCAGCTTTGTCGGACCCCCTGGGGACAGACTGGGGATTTTGCTATTaGAACTGTCCAATGAAGTGG +
Preference number: 2 (lower is better)
Translates to: SALARRMGAALSDPLGTDWGFCY*NCPMKW
Trigger: CCACTTCATTGGACAGTTGCAATAGCAAAATCCCCA...GTCTGTCCCCAGGGGGTCCGACAAAGCTGCTCCCATCCTCCTGGCAAGCGCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000170846.8
ENSMUST00000215370.2
3UTR-3UTR CCA 90 bp GTAGCTCAGCGCTTGCCAGGAGGATGGGAGCAGCTTTGTCGGACCCCCTGGGGAGCTCATGTTCAGGCTTaGGTACTGAGCAAATACTTT +
Preference number: 2 (lower is better)
Translates to: VAQRLPGGWEQLCRTPWGAHVQA*VLSKYF
Trigger: AAAGTATTTGCTCAGTACCCAAGCCTGAACATGAGC...TCCCCAGGGGGTCCGACAAAGCTGCTCCCATCCTCCTGGCAAGCGCTGAGCTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000170846.8
ENSMUST00000215370.2
3UTR-3UTR TCA 90 bp TCAGCGCTTGCCAGGAGGATGGGAGCAGCTTTGTCGGACCCCCTGGGGACAGACTTCAGGCTTGGGTACTaGGCAAATACTTTTAAGTTG +
Preference number: 2 (lower is better)
Translates to: SALARRMGAALSDPLGTDFRLGY*ANTFKL
Trigger: CAACTTAAAAGTATTTGCTCAGTACCCAAGCCTGAA...GTCTGTCCCCAGGGGGTCCGACAAAGCTGCTCCCATCCTCCTGGCAAGCGCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000170846.8
ENSMUST00000215370.2
3UTR-3UTR TCA 90 bp GTAGCTCAGCGCTTGCCAGGAGGATGGGAGCAGCTTTGTCGGACCCCCTGGGGATTCAGGCTTGGGTACTaGGCAAATACTTTTAAGTTG +
Preference number: 2 (lower is better)
Translates to: VAQRLPGGWEQLCRTPWGFRLGY*ANTFKL
Trigger: CAACTTAAAAGTATTTGCTCAGTACCCAAGCCTGAA...TCCCCAGGGGGTCCGACAAAGCTGCTCCCATCCTCCTGGCAAGCGCTGAGCTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000170846.8
ENSMUST00000215370.2
3UTR-3UTR CCA 90 bp ATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCCGCTGGCTCTCGTTCGAGCTCATGTTCAGGCTTaGGTACTGAGCAAATACTTT +
Preference number: 2 (lower is better)
Translates to: IWSRTTEEGHSAPLALVRAHVQA*VLSKYF
Trigger: AAAGTATTTGCTCAGTACCCAAGCCTGAACATGAGC...TCGAACGAGAGCCAGCGGAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
3UTR-3UTR GCA 90 bp TTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCCGCTGGCTCATTCCATTCTGTGAATaGTCATGTTCAGGCTTGGGT +
Preference number: 2 (lower is better)
Translates to: LIKSGPGQQRRATLLRWLIPFCE*SCSGLG
Trigger: ACCCAAGCCTGAACATGAGCATTCACAGAATGGAAT...GAGCCAGCGGAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
3UTR-3UTR GCA 90 bp CCGCTATCGACCTCCATGGACTTTCTAGAGAACAGGAGCCGGACATCTCTATGGATTCCATTCTGTGAATaGTCATGTTCAGGCTTGGGT +
Preference number: 2 (lower is better)
Translates to: PLSTSMDFLENRSRTSLWIPFCE*SCSGLG
Trigger: ACCCAAGCCTGAACATGAGCATTCACAGAATGGAAT...CCATAGAGATGTCCGGCTCCTGTTCTCTAGAAAGTCCATGGAGGTCGATAGCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214755.2
3UTR-3UTR CCA 90 bp TTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCCGCTGGCTCGCTCATGTTCAGGCTTaGGTACTGAGCAAATACTTT +
Preference number: 2 (lower is better)
Translates to: LIKSGPGQQRRATLLRWLAHVQA*VLSKYF
Trigger: AAAGTATTTGCTCAGTACCCAAGCCTGAACATGAGC...GAGCCAGCGGAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
3UTR-3UTR TCA 90 bp TTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCCGCTGGCTCTTCAGGCTTGGGTACTaGGCAAATACTTTTAAGTTG +
Preference number: 2 (lower is better)
Translates to: LIKSGPGQQRRATLLRWLFRLGY*ANTFKL
Trigger: CAACTTAAAAGTATTTGCTCAGTACCCAAGCCTGAA...GAGCCAGCGGAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
3UTR-3UTR GCA 90 bp AGGGGTCCTTTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCATTCCATTCTGTGAATaGTCATGTTCAGGCTTGGGT +
Preference number: 2 (lower is better)
Translates to: RGPLIKSGPGQQRRATLLIPFCE*SCSGLG
Trigger: ACCCAAGCCTGAACATGAGCATTCACAGAATGGAAT...GAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAAAGGACCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
3UTR-3UTR CCA 90 bp TGGTTTCAACAGTACAAAAAGGGCGACGACACGGGTGCTTCCAGTCCACTTAGGTCCTTTAATAAAATCTaGTCCAGGACAACAGAGGAG +
Preference number: 2 (lower is better)
Translates to: WFQQYKKGDDTGASSPLRSFNKI*SRTTEE
Trigger: CTCCTCTGTTGTCCTGGACCAGATTTTATTAAAGGA...CCTAAGTGGACTGGAAGCACCCGTGTCGTCGCCCTTTTTGTACTGTTGAAACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
3UTR-3UTR TCA 90 bp GGATTTGAGTTCATACGCAGCACCGCTATCGACCTCCATGGACTTTCTAGAGAATTCAGGCTTGGGTACTaGGCAAATACTTTTAAGTTG +
Preference number: 2 (lower is better)
Translates to: GFEFIRSTAIDLHGLSREFRLGY*ANTFKL
Trigger: CAACTTAAAAGTATTTGCTCAGTACCCAAGCCTGAA...TTCTCTAGAAAGTCCATGGAGGTCGATAGCGGTGCTGCGTATGAACTCAAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214755.2
3UTR CAA 90 bp GCTCTCGTTCGATGTATTCCATTCTGTGAATGCTCATGTTCAGGCTaGGGTACTGAGCAAATACTTTTAAGTTGTCCCCCTCATCAACAT +
Preference number: 2 (lower is better)
Translates to: ALVRCIPFCECSCSG*GTEQILLSCPPHQH
Trigger: ATGTTGATGAGGGGGACAACTTAAAAGTATTTGCTCAGTACCCAAGCCTGAACATGAGCATTCACAGAATGGAATACATCGAACGAGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000214755.2
3UTR CCA 72 bp GAGAATGGGCAGGTAGCTCAGCGCTTGCCAGGAGGATaGGAGCAGCTTTGTCGGACCCCCTGGGGACAGACC +
Preference number: 3 (lower is better)
Translates to: ENGQVAQRLPGG*EQLCRTPWGQT
Trigger: GGTCTGTCCCCAGGGGGTCCGACAAAGCTGCTCCCATCCTCCTGGCAAGCGCTGAGCTACCTGCCCATTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000170846.8
ENSMUST00000215370.2
3UTR-3UTR CAA 90 bp CTCAGCGCTTGCCAGGAGGATGGGAGCAGCTTTGTCGGACCCCCTGGGGACAGACTGGGGATTTTGCTATaGCAACTGTCCAATGAAGTG +
Preference number: 3 (lower is better)
Translates to: LSACQEDGSSFVGPPGDRLGILL*QLSNEV
Trigger: CACTTCATTGGACAGTTGCAATAGCAAAATCCCCAG...TCTGTCCCCAGGGGGTCCGACAAAGCTGCTCCCATCCTCCTGGCAAGCGCTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000170846.8
ENSMUST00000215370.2
3UTR CCA 72 bp GGTCCAGGACAACAGAGGAGGGCCACTCTGCTCCGCTaGCTCTCGTTCGATGTATTCCATTCTGTGAATGCT +
Preference number: 3 (lower is better)
Translates to: GPGQQRRATLLR*LSFDVFHSVNA
Trigger: AGCATTCACAGAATGGAATACATCGAACGAGAGCCAGCGGAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
3UTR CCA 72 bp TCACGGGTCTCACTTCAGGGGTCCTTTAATAAAATCTaGTCCAGGACAACAGAGGAGGGCCACTCTGCTCCG +
Preference number: 3 (lower is better)
Translates to: SRVSLQGSFNKI*SRTTEEGHSAP
Trigger: CGGAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAAAGGACCCCTGAAGTGAGACCCGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
3UTR TCA 72 bp GGAACTGAGAACGTCCTCTGTCTCAGGAATGTCTGGTaGTTGGCTGGCATACCTCGTAGGTCATACACGACT +
Preference number: 3 (lower is better)
Translates to: GTENVLCLRNVW*LAGIPRRSYTT
Trigger: AGTCGTGTATGACCTACGAGGTATGCCAGCCAATCACCAGACATTCCTGAGACAGAGGACGTTCTCAGTTCC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214755.2
3UTR-3UTR CAA 90 bp TTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCCGCTGGCTCCTGGGGATTTTGCTATaGCAACTGTCCAATGAAGTG +
Preference number: 3 (lower is better)
Translates to: LIKSGPGQQRRATLLRWLLGILL*QLSNEV
Trigger: CACTTCATTGGACAGTTGCAATAGCAAAATCCCCAG...GAGCCAGCGGAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
3UTR TCA 72 bp AAAACTGAGGGTTTGTTGGCGACTCAGTGTAGGATTTaGGTTCATACGCAGCACCGCTATCGACCTCCATGG +
Preference number: 3 (lower is better)
Translates to: KTEGLLATQCRI*VHTQHRYRPPW
Trigger: CCATGGAGGTCGATAGCGGTGCTGCGTATGAACTCAAATCCTACACTGAGTCGCCAACAAACCCTCAGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214755.2
3UTR-3UTR CAA 90 bp TTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCCGCTGGCTCTTCACCACAGTCTTATaGGGATTGAATAAGGTCAAG +
Preference number: 3 (lower is better)
Translates to: LIKSGPGQQRRATLLRWLFTTVL*GLNKVK
Trigger: CTTGACCTTATTCAATCCCAATAAGACTGTGGTGAA...GAGCCAGCGGAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214755.2
3UTR-3UTR CAA 90 bp GGATTTGAGTTCATACGCAGCACCGCTATCGACCTCCATGGACTTTCTAGAGAACTGGGGATTTTGCTATaGCAACTGTCCAATGAAGTG +
Preference number: 3 (lower is better)
Translates to: GFEFIRSTAIDLHGLSRELGILL*QLSNEV
Trigger: CACTTCATTGGACAGTTGCAATAGCAAAATCCCCAG...TTCTCTAGAAAGTCCATGGAGGTCGATAGCGGTGCTGCGTATGAACTCAAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214755.2
3UTR GCA 72 bp CCGCTGGCTCTCGTTCGATGTATTCCATTCTGTGAATaGTCATGTTCAGGCTTGGGTACTGAGCAAATACTT +
Preference number: 3 (lower is better)
Translates to: PLALVRCIPFCE*SCSGLGTEQIL
Trigger: AAGTATTTGCTCAGTACCCAAGCCTGAACATGAGCATTCACAGAATGGAATACATCGAACGAGAGCCAGCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
3UTR-3UTR CAA 90 bp TGGTTTCAACAGTACAAAAAGGGCGACGACACGGGTGCTTCCAGTCCACTTAGGACAGTCTTATTGGGATaGAATAAGGTCAAGGTTGTT +
Preference number: 3 (lower is better)
Translates to: WFQQYKKGDDTGASSPLRTVLLG*NKVKVV
Trigger: AACAACCTTGACCTTATTCAATCCCAATAAGACTGT...CCTAAGTGGACTGGAAGCACCCGTGTCGTCGCCCTTTTTGTACTGTTGAAACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000214755.2
3UTR CAA 72 bp GGTAGCTCAGCGCTTGCCAGGAGGATGGGAGCAGCTTaGTCGGACCCCCTGGGGACAGACCCTGGGCGAGTG +
Preference number: 4 (lower is better)
Translates to: GSSALARRMGAA*SDPLGTDPGRV
Trigger: CACTCGCCCAGGGTCTGTCCCCAGGGGGTCCGACAAAGCTGCTCCCATCCTCCTGGCAAGCGCTGAGCTACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000170846.8
ENSMUST00000215370.2
CDS-3UTR TCA 90 bp GTAGCTCAGCGCTTGCCAGGAGGATGGGAGCAGCTTTGTCGGACCCCCTGGGGACCCAGGACACTGGCTTaGGGTGCCCCCTGGTCAGAC +
Preference number: 4 (lower is better)
Translates to: VAQRLPGGWEQLCRTPWGPRTLA*GAPWSD
Trigger: GTCTGACCAGGGGGCACCTCAAGCCAGTGTCCTGGG...TCCCCAGGGGGTCCGACAAAGCTGCTCCCATCCTCCTGGCAAGCGCTGAGCTAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000170846.8
ENSMUST00000215370.2
CDS-3UTR TCA 90 bp CAGCGCTTGCCAGGAGGATGGGAGCAGCTTTGTCGGACCCCCTGGGGACAGACCCTCCCCCAGTGCCACTaGAGCCCAGGACACTGGCTT +
Preference number: 4 (lower is better)
Translates to: QRLPGGWEQLCRTPWGQTLPQCH*SPGHWL
Trigger: AAGCCAGTGTCCTGGGCTTCAGTGGCACTGGGGGAG...GGTCTGTCCCCAGGGGGTCCGACAAAGCTGCTCCCATCCTCCTGGCAAGCGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000170846.8
ENSMUST00000215370.2
CDS-3UTR TCA 90 bp CAGCGCTTGCCAGGAGGATGGGAGCAGCTTTGTCGGACCCCCTGGGGACAGACCGTGCAATCCTGGCTATaGCGTCCTGCCGCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: QRLPGGWEQLCRTPWGQTVQSWL*RPAAPG
Trigger: TCCAGGAGCGGCAGGACGTCATAGCCAGGATTGCAC...GGTCTGTCCCCAGGGGGTCCGACAAAGCTGCTCCCATCCTCCTGGCAAGCGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000170846.8
ENSMUST00000215370.2
CDS-3UTR GCA 90 bp CTCAGCGCTTGCCAGGAGGATGGGAGCAGCTTTGTCGGACCCCCTGGGGACAGACCTGGTCAGACTTGCTaGCTGTGCCTGGGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: LSACQEDGSSFVGPPGDRPGQTC*LCLGRA
Trigger: GGCTCTGCCCAGGCACAGGCAGCAAGTCTGACCAGG...TCTGTCCCCAGGGGGTCCGACAAAGCTGCTCCCATCCTCCTGGCAAGCGCTGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000170846.8
ENSMUST00000215370.2
CDS-3UTR TCA 90 bp CTCAGCGCTTGCCAGGAGGATGGGAGCAGCTTTGTCGGACCCCCTGGGGACAGACCAGGGCCATGGTGCTaGCAGGCTCTAAGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: LSACQEDGSSFVGPPGDRPGPWC*QALSSC
Trigger: ACAGGAGCTTAGAGCCTGTCAGCACCATGGCCCTGG...TCTGTCCCCAGGGGGTCCGACAAAGCTGCTCCCATCCTCCTGGCAAGCGCTGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000170846.8
ENSMUST00000215370.2
CDS-3UTR TCA 90 bp ATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCCGCTGGCTCTCGTTCGACCCAGGACACTGGCTTaGGGTGCCCCCTGGTCAGAC +
Preference number: 4 (lower is better)
Translates to: IWSRTTEEGHSAPLALVRPRTLA*GAPWSD
Trigger: GTCTGACCAGGGGGCACCTCAAGCCAGTGTCCTGGG...TCGAACGAGAGCCAGCGGAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR TCA 90 bp TCAGCGCTTGCCAGGAGGATGGGAGCAGCTTTGTCGGACCCCCTGGGGACAGACGTGCAATCCTGGCTATaGCGTCCTGCCGCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: SALARRMGAALSDPLGTDVQSWL*RPAAPG
Trigger: TCCAGGAGCGGCAGGACGTCATAGCCAGGATTGCAC...GTCTGTCCCCAGGGGGTCCGACAAAGCTGCTCCCATCCTCCTGGCAAGCGCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000170846.8
ENSMUST00000215370.2
CDS-3UTR GCA 90 bp TCAGCGCTTGCCAGGAGGATGGGAGCAGCTTTGTCGGACCCCCTGGGGACAGACCCTGGGAAGCGAGACTaGGCTGGAGGGCAGTGGAAA +
Preference number: 4 (lower is better)
Translates to: SALARRMGAALSDPLGTDPGKRD*AGGQWK
Trigger: TTTCCACTGCCCTCCAGCGCAGTCTCGCTTCCCAGG...GTCTGTCCCCAGGGGGTCCGACAAAGCTGCTCCCATCCTCCTGGCAAGCGCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000170846.8
ENSMUST00000215370.2
CDS-3UTR TCA 90 bp GTAGCTCAGCGCTTGCCAGGAGGATGGGAGCAGCTTTGTCGGACCCCCTGGGGATTGAGGAACTGGACTTaGGAGGAGAGGCAGCCCCGT +
Preference number: 4 (lower is better)
Translates to: VAQRLPGGWEQLCRTPWGLRNWT*EERQPR
Trigger: ACGGGGCTGCCTCTCCTCTCAAGTCCAGTTCCTCAA...TCCCCAGGGGGTCCGACAAAGCTGCTCCCATCCTCCTGGCAAGCGCTGAGCTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000170846.8
ENSMUST00000215370.2
CDS-3UTR GCA 90 bp GTAGCTCAGCGCTTGCCAGGAGGATGGGAGCAGCTTTGTCGGACCCCCTGGGGAGGGCCAGCTTGTCGCTaGATTCATGTCTGGCCGTTC +
Preference number: 4 (lower is better)
Translates to: VAQRLPGGWEQLCRTPWGGPACR*IHVWPF
Trigger: GAACGGCCAGACATGAATGCAGCGACAAGCTGGCCC...TCCCCAGGGGGTCCGACAAAGCTGCTCCCATCCTCCTGGCAAGCGCTGAGCTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000170846.8
ENSMUST00000215370.2
CDS-3UTR GCA 90 bp AGCTCAGCGCTTGCCAGGAGGATGGGAGCAGCTTTGTCGGACCCCCTGGGGACAGGGCCAGCTTGTCGCTaGATTCATGTCTGGCCGTTC +
Preference number: 4 (lower is better)
Translates to: SSALARRMGAALSDPLGTGPACR*IHVWPF
Trigger: GAACGGCCAGACATGAATGCAGCGACAAGCTGGCCC...TGTCCCCAGGGGGTCCGACAAAGCTGCTCCCATCCTCCTGGCAAGCGCTGAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000170846.8
ENSMUST00000215370.2
CDS-3UTR GCA 90 bp GTAGCTCAGCGCTTGCCAGGAGGATGGGAGCAGCTTTGTCGGACCCCCTGGGGACAGGGCACTCACGGGTaGCATGGTCCATGTGTGCTT +
Preference number: 4 (lower is better)
Translates to: VAQRLPGGWEQLCRTPWGQGTHG*HGPCVL
Trigger: AAGCACACATGGACCATGGCACCCGTGAGTGCCCTG...TCCCCAGGGGGTCCGACAAAGCTGCTCCCATCCTCCTGGCAAGCGCTGAGCTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000170846.8
ENSMUST00000215370.2
CDS-3UTR GCA 90 bp TCAGCGCTTGCCAGGAGGATGGGAGCAGCTTTGTCGGACCCCCTGGGGACAGACCAGGGCACTCACGGGTaGCATGGTCCATGTGTGCTT +
Preference number: 4 (lower is better)
Translates to: SALARRMGAALSDPLGTDQGTHG*HGPCVL
Trigger: AAGCACACATGGACCATGGCACCCGTGAGTGCCCTG...GTCTGTCCCCAGGGGGTCCGACAAAGCTGCTCCCATCCTCCTGGCAAGCGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000170846.8
ENSMUST00000215370.2
CDS-3UTR CCA 90 bp TCAGCGCTTGCCAGGAGGATGGGAGCAGCTTTGTCGGACCCCCTGGGGACAGACCACTCACGGGTGCCATaGTCCATGTGTGCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: SALARRMGAALSDPLGTDHSRVP*SMCACC
Trigger: GCAGCAAGCACACATGGACCATGGCACCCGTGAGTG...GTCTGTCCCCAGGGGGTCCGACAAAGCTGCTCCCATCCTCCTGGCAAGCGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000170846.8
ENSMUST00000215370.2
CDS-3UTR TCA 90 bp ATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCCGCTGGCTCTCGTTCGAGGCTGCCGAGAGCTCTaGCAGCTGGAGACACTGGAA +
Preference number: 4 (lower is better)
Translates to: IWSRTTEEGHSAPLALVRGCREL*QLETLE
Trigger: TTCCAGTGTCTCCAGCTGTCAGAGCTCTCGGCAGCC...TCGAACGAGAGCCAGCGGAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR GCA 90 bp TCAGCGCTTGCCAGGAGGATGGGAGCAGCTTTGTCGGACCCCCTGGGGACAGACGGGATCATTCAGATCTaGCCCCTCTGTACTAGGCCC +
Preference number: 4 (lower is better)
Translates to: SALARRMGAALSDPLGTDGIIQI*PLCTRP
Trigger: GGGCCTAGTACAGAGGGGGCAGATCTGAATGATCCC...GTCTGTCCCCAGGGGGTCCGACAAAGCTGCTCCCATCCTCCTGGCAAGCGCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000170846.8
ENSMUST00000215370.2
CDS-3UTR CCA 90 bp CTCAGCGCTTGCCAGGAGGATGGGAGCAGCTTTGTCGGACCCCCTGGGGACAGACTTGCTGCCTGTGCCTaGGCAGAGCCTGACATTTCT +
Preference number: 4 (lower is better)
Translates to: LSACQEDGSSFVGPPGDRLAACA*AEPDIS
Trigger: AGAAATGTCAGGCTCTGCCCAGGCACAGGCAGCAAG...TCTGTCCCCAGGGGGTCCGACAAAGCTGCTCCCATCCTCCTGGCAAGCGCTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000170846.8
ENSMUST00000215370.2
CDS-3UTR TCA 90 bp CAGCGCTTGCCAGGAGGATGGGAGCAGCTTTGTCGGACCCCCTGGGGACAGACCCGTGGAATAGCACCATaGGAAACACTCAGCCAAGCA +
Preference number: 4 (lower is better)
Translates to: QRLPGGWEQLCRTPWGQTRGIAP*ETLSQA
Trigger: TGCTTGGCTGAGTGTTTCTCATGGTGCTATTCCACG...GGTCTGTCCCCAGGGGGTCCGACAAAGCTGCTCCCATCCTCCTGGCAAGCGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000170846.8
ENSMUST00000215370.2
CDS-3UTR TCA 90 bp CTCAGCGCTTGCCAGGAGGATGGGAGCAGCTTTGTCGGACCCCCTGGGGACAGATTCAAGGCCACATTGTaGGAGACATTGGGGACGGGA +
Preference number: 4 (lower is better)
Translates to: LSACQEDGSSFVGPPGDRFKATL*ETLGTG
Trigger: TCCCGTCCCCAATGTCTCTCACAATGTGGCCTTGAA...TCTGTCCCCAGGGGGTCCGACAAAGCTGCTCCCATCCTCCTGGCAAGCGCTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000170846.8
ENSMUST00000215370.2
CDS-3UTR TCA 90 bp AGCTCAGCGCTTGCCAGGAGGATGGGAGCAGCTTTGTCGGACCCCCTGGGGACATTCAAGGCCACATTGTaGGAGACATTGGGGACGGGA +
Preference number: 4 (lower is better)
Translates to: SSALARRMGAALSDPLGTFKATL*ETLGTG
Trigger: TCCCGTCCCCAATGTCTCTCACAATGTGGCCTTGAA...TGTCCCCAGGGGGTCCGACAAAGCTGCTCCCATCCTCCTGGCAAGCGCTGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000170846.8
ENSMUST00000215370.2
CDS-3UTR TCA 90 bp AGCTCAGCGCTTGCCAGGAGGATGGGAGCAGCTTTGTCGGACCCCCTGGGGACATGTCTGGGTAAGGACTaGACGCTGACTTTCAAGGCC +
Preference number: 4 (lower is better)
Translates to: SSALARRMGAALSDPLGTCLGKD*TLTFKA
Trigger: GGCCTTGAAAGTCAGCGTTCAGTCCTTACCCAGACA...TGTCCCCAGGGGGTCCGACAAAGCTGCTCCCATCCTCCTGGCAAGCGCTGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000170846.8
ENSMUST00000215370.2
CDS-3UTR TCA 90 bp ATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCCGCTGGCTCTCGTTCGATTGAGGAACTGGACTTaGGAGGAGAGGCAGCCCCGT +
Preference number: 4 (lower is better)
Translates to: IWSRTTEEGHSAPLALVRLRNWT*EERQPR
Trigger: ACGGGGCTGCCTCTCCTCTCAAGTCCAGTTCCTCAA...TCGAACGAGAGCCAGCGGAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR GCA 90 bp CTCAGCGCTTGCCAGGAGGATGGGAGCAGCTTTGTCGGACCCCCTGGGGACAGAGACAGCCAGCAGAAGTaGCTTCTCTTCGATGAAGCG +
Preference number: 4 (lower is better)
Translates to: LSACQEDGSSFVGPPGDRDSQQK*LLFDEA
Trigger: CGCTTCATCGAAGAGAAGGCACTTCTGCTGGCTGTC...TCTGTCCCCAGGGGGTCCGACAAAGCTGCTCCCATCCTCCTGGCAAGCGCTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000170846.8
ENSMUST00000215370.2
CDS-3UTR GCA 90 bp GTAGCTCAGCGCTTGCCAGGAGGATGGGAGCAGCTTTGTCGGACCCCCTGGGGAGACAGCCAGCAGAAGTaGCTTCTCTTCGATGAAGCG +
Preference number: 4 (lower is better)
Translates to: VAQRLPGGWEQLCRTPWGDSQQK*LLFDEA
Trigger: CGCTTCATCGAAGAGAAGGCACTTCTGCTGGCTGTC...TCCCCAGGGGGTCCGACAAAGCTGCTCCCATCCTCCTGGCAAGCGCTGAGCTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000170846.8
ENSMUST00000215370.2
CDS-3UTR GCA 90 bp TCAGCGCTTGCCAGGAGGATGGGAGCAGCTTTGTCGGACCCCCTGGGGACAGACATAGGCTCTGTGAGCTaGTGGGACAACGGTACTCCA +
Preference number: 4 (lower is better)
Translates to: SALARRMGAALSDPLGTDIGSVS*WDNGTP
Trigger: TGGAGTACCGTTGTCCCAGCAGCTCACAGAGCCTAT...GTCTGTCCCCAGGGGGTCCGACAAAGCTGCTCCCATCCTCCTGGCAAGCGCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000170846.8
ENSMUST00000215370.2
CDS-3UTR CCA 90 bp GTAGCTCAGCGCTTGCCAGGAGGATGGGAGCAGCTTTGTCGGACCCCCTGGGGAATTCTGTCGGGGAACTaGCTCCAAGATCCACCTCTC +
Preference number: 4 (lower is better)
Translates to: VAQRLPGGWEQLCRTPWGILSGN*LQDPPL
Trigger: GAGAGGTGGATCTTGGAGCCAGTTCCCCGACAGAAT...TCCCCAGGGGGTCCGACAAAGCTGCTCCCATCCTCCTGGCAAGCGCTGAGCTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000170846.8
ENSMUST00000215370.2
CDS-3UTR CCA 90 bp GTAGCTCAGCGCTTGCCAGGAGGATGGGAGCAGCTTTGTCGGACCCCCTGGGGAGAGAGCTCTGACAGCTaGAGACACTGGAATCGACCA +
Preference number: 4 (lower is better)
Translates to: VAQRLPGGWEQLCRTPWGESSDS*RHWNRP
Trigger: TGGTCGATTCCAGTGTCTCCAGCTGTCAGAGCTCTC...TCCCCAGGGGGTCCGACAAAGCTGCTCCCATCCTCCTGGCAAGCGCTGAGCTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000170846.8
ENSMUST00000215370.2
CDS-3UTR CCA 90 bp CTCAGCGCTTGCCAGGAGGATGGGAGCAGCTTTGTCGGACCCCCTGGGGACAGATGGGGAGCCAAACTCTaGACTCCCAAAGGAGACAGA +
Preference number: 4 (lower is better)
Translates to: LSACQEDGSSFVGPPGDRWGAKL*TPKGDR
Trigger: TCTGTCTCCTTTGGGAGTCCAGAGTTTGGCTCCCCA...TCTGTCCCCAGGGGGTCCGACAAAGCTGCTCCCATCCTCCTGGCAAGCGCTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000170846.8
ENSMUST00000215370.2
CDS-3UTR TCA 90 bp GTAGCTCAGCGCTTGCCAGGAGGATGGGAGCAGCTTTGTCGGACCCCCTGGGGACGTGGAATAGCACCATaGGAAACACTCAGCCAAGCA +
Preference number: 4 (lower is better)
Translates to: VAQRLPGGWEQLCRTPWGRGIAP*ETLSQA
Trigger: TGCTTGGCTGAGTGTTTCTCATGGTGCTATTCCACG...TCCCCAGGGGGTCCGACAAAGCTGCTCCCATCCTCCTGGCAAGCGCTGAGCTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000170846.8
ENSMUST00000215370.2
CDS-3UTR TCA 90 bp CTCAGCGCTTGCCAGGAGGATGGGAGCAGCTTTGTCGGACCCCCTGGGGACAGACTCAGTTGGAGTCTGTaGAAAACTCCACTGCAGGTC +
Preference number: 4 (lower is better)
Translates to: LSACQEDGSSFVGPPGDRLSWSL*KTPLQV
Trigger: GACCTGCAGTGGAGTTTTTCACAGACTCCAACTGAG...TCTGTCCCCAGGGGGTCCGACAAAGCTGCTCCCATCCTCCTGGCAAGCGCTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000170846.8
ENSMUST00000215370.2
CDS-3UTR TCA 90 bp TCAGCGCTTGCCAGGAGGATGGGAGCAGCTTTGTCGGACCCCCTGGGGACAGACACACCCACTTTCCTGTaGAACTGGGTGAAGCTTTGG +
Preference number: 4 (lower is better)
Translates to: SALARRMGAALSDPLGTDTPTFL*NWVKLW
Trigger: CCAAAGCTTCACCCAGTTTCACAGGAAAGTGGGTGT...GTCTGTCCCCAGGGGGTCCGACAAAGCTGCTCCCATCCTCCTGGCAAGCGCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000170846.8
ENSMUST00000215370.2
CDS-3UTR TCA 90 bp TCAGCGCTTGCCAGGAGGATGGGAGCAGCTTTGTCGGACCCCCTGGGGACAGACCGAGGGTACAGACTGTaGGAAGTGCAAGTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: SALARRMGAALSDPLGTDRGYRL*EVQVSP
Trigger: AGGAGAAACTTGCACTTCTCACAGTCTGTACCCTCG...GTCTGTCCCCAGGGGGTCCGACAAAGCTGCTCCCATCCTCCTGGCAAGCGCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000170846.8
ENSMUST00000215370.2
CDS-3UTR TCA 90 bp CGCAGCACCGCTATCGACCTCCATGGACTTTCTAGAGAACAGGAGCCGGACATCGTGCAATCCTGGCTATaGCGTCCTGCCGCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: RSTAIDLHGLSREQEPDIVQSWL*RPAAPG
Trigger: TCCAGGAGCGGCAGGACGTCATAGCCAGGATTGCAC...GATGTCCGGCTCCTGTTCTCTAGAAAGTCCATGGAGGTCGATAGCGGTGCTGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214755.2
CDS-3UTR GCA 90 bp CTCAGCGCTTGCCAGGAGGATGGGAGCAGCTTTGTCGGACCCCCTGGGGACAGAGGGACGGGAAACACATaGTCAGTTGGAGTCTGTGAA +
Preference number: 4 (lower is better)
Translates to: LSACQEDGSSFVGPPGDRGTGNT*SVGVCE
Trigger: TTCACAGACTCCAACTGAGCATGTGTTTCCCGTCCC...TCTGTCCCCAGGGGGTCCGACAAAGCTGCTCCCATCCTCCTGGCAAGCGCTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000170846.8
ENSMUST00000215370.2
CDS-3UTR CCA 90 bp CAGCGCTTGCCAGGAGGATGGGAGCAGCTTTGTCGGACCCCCTGGGGACAGACCCATTGTGAGAGACATTaGGGACGGGAAACACATGCT +
Preference number: 4 (lower is better)
Translates to: QRLPGGWEQLCRTPWGQTHCERH*GRETHA
Trigger: AGCATGTGTTTCCCGTCCCCAATGTCTCTCACAATG...GGTCTGTCCCCAGGGGGTCCGACAAAGCTGCTCCCATCCTCCTGGCAAGCGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000170846.8
ENSMUST00000215370.2
CDS-3UTR TCA 90 bp ATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCCGCTGGCTCTCGTTCGAGTGCCTTCTCTTCGATaGAGCGGTCACCATTCTGTC +
Preference number: 4 (lower is better)
Translates to: IWSRTTEEGHSAPLALVRVPSLR*SGHHSV
Trigger: GACAGAATGGTGACCGCTTCATCGAAGAGAAGGCAC...TCGAACGAGAGCCAGCGGAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR GCA 90 bp ATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCCGCTGGCTCTCGTTCGAATAGGCTCTGTGAGCTaGTGGGACAACGGTACTCCA +
Preference number: 4 (lower is better)
Translates to: IWSRTTEEGHSAPLALVRIGSVS*WDNGTP
Trigger: TGGAGTACCGTTGTCCCAGCAGCTCACAGAGCCTAT...TCGAACGAGAGCCAGCGGAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR CCA 90 bp ATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCCGCTGGCTCTCGTTCGAATTCTGTCGGGGAACTaGCTCCAAGATCCACCTCTC +
Preference number: 4 (lower is better)
Translates to: IWSRTTEEGHSAPLALVRILSGN*LQDPPL
Trigger: GAGAGGTGGATCTTGGAGCCAGTTCCCCGACAGAAT...TCGAACGAGAGCCAGCGGAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR CCA 90 bp GTAGCTCAGCGCTTGCCAGGAGGATGGGAGCAGCTTTGTCGGACCCCCTGGGGACATTGTGAGAGACATTaGGGACGGGAAACACATGCT +
Preference number: 4 (lower is better)
Translates to: VAQRLPGGWEQLCRTPWGHCERH*GRETHA
Trigger: AGCATGTGTTTCCCGTCCCCAATGTCTCTCACAATG...TCCCCAGGGGGTCCGACAAAGCTGCTCCCATCCTCCTGGCAAGCGCTGAGCTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000170846.8
ENSMUST00000215370.2
CDS-3UTR CCA 90 bp ATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCCGCTGGCTCTCGTTCGAGAGAGCTCTGACAGCTaGAGACACTGGAATCGACCA +
Preference number: 4 (lower is better)
Translates to: IWSRTTEEGHSAPLALVRESSDS*RHWNRP
Trigger: TGGTCGATTCCAGTGTCTCCAGCTGTCAGAGCTCTC...TCGAACGAGAGCCAGCGGAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
3UTR CAA 72 bp CTTAGAAGGAATGAGAATGGGCAGGTAGCTCAGCGCTaGCCAGGAGGATGGGAGCAGCTTTGTCGGACCCCC +
Preference number: 4 (lower is better)
Translates to: LRRNENGQVAQR*PGGWEQLCRTP
Trigger: GGGGGTCCGACAAAGCTGCTCCCATCCTCCTGGCAAGCGCTGAGCTACCTGCCCATTCTCATTCCTTCTAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000170846.8
ENSMUST00000215370.2
CDS-3UTR TCA 90 bp ATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCCGCTGGCTCTCGTTCGACTCAGTTGGAGTCTGTaGAAAACTCCACTGCAGGTC +
Preference number: 4 (lower is better)
Translates to: IWSRTTEEGHSAPLALVRLSWSL*KTPLQV
Trigger: GACCTGCAGTGGAGTTTTTCACAGACTCCAACTGAG...TCGAACGAGAGCCAGCGGAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR TCA 90 bp AGGGGTCCTTTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCCTCCCCCAGTGCCACTaGAGCCCAGGACACTGGCTT +
Preference number: 4 (lower is better)
Translates to: RGPLIKSGPGQQRRATLLLPQCH*SPGHWL
Trigger: AAGCCAGTGTCCTGGGCTTCAGTGGCACTGGGGGAG...GAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAAAGGACCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR TCA 90 bp CCGCTATCGACCTCCATGGACTTTCTAGAGAACAGGAGCCGGACATCTCTATGGGGCTGCCGAGAGCTCTaGCAGCTGGAGACACTGGAA +
Preference number: 4 (lower is better)
Translates to: PLSTSMDFLENRSRTSLWGCREL*QLETLE
Trigger: TTCCAGTGTCTCCAGCTGTCAGAGCTCTCGGCAGCC...CCATAGAGATGTCCGGCTCCTGTTCTCTAGAAAGTCCATGGAGGTCGATAGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214755.2
CDS-3UTR TCA 90 bp ATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCCGCTGGCTCTCGTTCGATCCTGTGAAACTGGGTaGAGCTTTGGGCTAAGTGAC +
Preference number: 4 (lower is better)
Translates to: IWSRTTEEGHSAPLALVRSCETG*SFGLSD
Trigger: GTCACTTAGCCCAAAGCTTCACCCAGTTTCACAGGA...TCGAACGAGAGCCAGCGGAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR TCA 90 bp CAGCGCTTGCCAGGAGGATGGGAGCAGCTTTGTCGGACCCCCTGGGGACAGACCTTTCCTCCAGACACTTaGATGTTTCAGTGTAGTCCT +
Preference number: 4 (lower is better)
Translates to: QRLPGGWEQLCRTPWGQTFPPDT*MFQCSP
Trigger: AGGACTACACTGAAACATTCAAGTGTCTGGAGGAAA...GGTCTGTCCCCAGGGGGTCCGACAAAGCTGCTCCCATCCTCCTGGCAAGCGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000170846.8
ENSMUST00000215370.2
CDS-3UTR TCA 90 bp TCAGCGCTTGCCAGGAGGATGGGAGCAGCTTTGTCGGACCCCCTGGGGACAGACGACTGTGTTTTTCTTTaGGGAACTGGACTTGAGAGG +
Preference number: 4 (lower is better)
Translates to: SALARRMGAALSDPLGTDDCVFL*GTGLER
Trigger: CCTCTCAAGTCCAGTTCCTCAAAGAAAAACACAGTC...GTCTGTCCCCAGGGGGTCCGACAAAGCTGCTCCCATCCTCCTGGCAAGCGCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000170846.8
ENSMUST00000215370.2
CDS-3UTR TCA 90 bp CTCAGCGCTTGCCAGGAGGATGGGAGCAGCTTTGTCGGACCCCCTGGGGACAGAGACTGTGTTTTTCTTTaGGGAACTGGACTTGAGAGG +
Preference number: 4 (lower is better)
Translates to: LSACQEDGSSFVGPPGDRDCVFL*GTGLER
Trigger: CCTCTCAAGTCCAGTTCCTCAAAGAAAAACACAGTC...TCTGTCCCCAGGGGGTCCGACAAAGCTGCTCCCATCCTCCTGGCAAGCGCTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000170846.8
ENSMUST00000215370.2
CDS-3UTR GCA 90 bp ATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCCGCTGGCTCTCGTTCGAGGGACGGGAAACACATaGTCAGTTGGAGTCTGTGAA +
Preference number: 4 (lower is better)
Translates to: IWSRTTEEGHSAPLALVRGTGNT*SVGVCE
Trigger: TTCACAGACTCCAACTGAGCATGTGTTTCCCGTCCC...TCGAACGAGAGCCAGCGGAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR GCA 90 bp TTTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCCGCTGGCTCCTGGTCAGACTTGCTaGCTGTGCCTGGGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: FNKIWSRTTEEGHSAPLAPGQTC*LCLGRA
Trigger: GGCTCTGCCCAGGCACAGGCAGCAAGTCTGACCAGG...AGCCAGCGGAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR CCA 90 bp CAGCGCTTGCCAGGAGGATGGGAGCAGCTTTGTCGGACCCCCTGGGGACAGACCAACTGTGCCGTGTGCTaGACGTTCTCTTTGTTAATA +
Preference number: 4 (lower is better)
Translates to: QRLPGGWEQLCRTPWGQTNCAVC*TFSLLI
Trigger: TATTAACAAAGAGAACGTCCAGCACACGGCACAGTT...GGTCTGTCCCCAGGGGGTCCGACAAAGCTGCTCCCATCCTCCTGGCAAGCGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000170846.8
ENSMUST00000215370.2
CDS-3UTR TCA 90 bp TGGTTTCAACAGTACAAAAAGGGCGACGACACGGGTGCTTCCAGTCCACTTAGGCCAGGGCCATGGTGCTaGCAGGCTCTAAGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: WFQQYKKGDDTGASSPLRPGPWC*QALSSC
Trigger: ACAGGAGCTTAGAGCCTGTCAGCACCATGGCCCTGG...CCTAAGTGGACTGGAAGCACCCGTGTCGTCGCCCTTTTTGTACTGTTGAAACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR TCA 90 bp GGATTTGAGTTCATACGCAGCACCGCTATCGACCTCCATGGACTTTCTAGAGAACCCAGGACACTGGCTTaGGGTGCCCCCTGGTCAGAC +
Preference number: 4 (lower is better)
Translates to: GFEFIRSTAIDLHGLSREPRTLA*GAPWSD
Trigger: GTCTGACCAGGGGGCACCTCAAGCCAGTGTCCTGGG...TTCTCTAGAAAGTCCATGGAGGTCGATAGCGGTGCTGCGTATGAACTCAAATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000214755.2
CDS-3UTR TCA 90 bp TTCAGGGGTCCTTTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCCCCCAGTGCCACTaGAGCCCAGGACACTGGCTT +
Preference number: 4 (lower is better)
Translates to: FRGPLIKSGPGQQRRATLLPQCH*SPGHWL
Trigger: AAGCCAGTGTCCTGGGCTTCAGTGGCACTGGGGGAG...CAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAAAGGACCCCTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR TCA 90 bp TGGTTTCAACAGTACAAAAAGGGCGACGACACGGGTGCTTCCAGTCCACTTAGGGGCTGCCGAGAGCTCTaGCAGCTGGAGACACTGGAA +
Preference number: 4 (lower is better)
Translates to: WFQQYKKGDDTGASSPLRGCREL*QLETLE
Trigger: TTCCAGTGTCTCCAGCTGTCAGAGCTCTCGGCAGCC...CCTAAGTGGACTGGAAGCACCCGTGTCGTCGCCCTTTTTGTACTGTTGAAACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR TCA 90 bp TTTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCCGCTGGCTGTGCAATCCTGGCTATaGCGTCCTGCCGCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: FNKIWSRTTEEGHSAPLAVQSWL*RPAAPG
Trigger: TCCAGGAGCGGCAGGACGTCATAGCCAGGATTGCAC...AGCCAGCGGAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR TCA 90 bp ATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCCGCTGGCTCTCGTTCGAATGAAAGGCTCTGGTTaGTGTCCCATCCAAGGAATG +
Preference number: 4 (lower is better)
Translates to: IWSRTTEEGHSAPLALVRMKGSG*CPIQGM
Trigger: CATTCCTTGGATGGGACATCAACCAGAGCCTTTCAT...TCGAACGAGAGCCAGCGGAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR GCA 90 bp TGGTTTCAACAGTACAAAAAGGGCGACGACACGGGTGCTTCCAGTCCACTTAGGCCTGGGAAGCGAGACTaGGCTGGAGGGCAGTGGAAA +
Preference number: 4 (lower is better)
Translates to: WFQQYKKGDDTGASSPLRPGKRD*AGGQWK
Trigger: TTTCCACTGCCCTCCAGCGCAGTCTCGCTTCCCAGG...CCTAAGTGGACTGGAAGCACCCGTGTCGTCGCCCTTTTTGTACTGTTGAAACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR GCA 90 bp CCGCTATCGACCTCCATGGACTTTCTAGAGAACAGGAGCCGGACATCTCTATGGGGGCCAGCTTGTCGCTaGATTCATGTCTGGCCGTTC +
Preference number: 4 (lower is better)
Translates to: PLSTSMDFLENRSRTSLWGPACR*IHVWPF
Trigger: GAACGGCCAGACATGAATGCAGCGACAAGCTGGCCC...CCATAGAGATGTCCGGCTCCTGTTCTCTAGAAAGTCCATGGAGGTCGATAGCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000214755.2
CDS-3UTR GCA 90 bp TTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCCGCTGGCTCCAGGGCACTCACGGGTaGCATGGTCCATGTGTGCTT +
Preference number: 4 (lower is better)
Translates to: LIKSGPGQQRRATLLRWLQGTHG*HGPCVL
Trigger: AAGCACACATGGACCATGGCACCCGTGAGTGCCCTG...GAGCCAGCGGAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR GCA 90 bp TTCAGGGGTCCTTTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCCTGGTCAGACTTGCTaGCTGTGCCTGGGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: FRGPLIKSGPGQQRRATLPGQTC*LCLGRA
Trigger: GGCTCTGCCCAGGCACAGGCAGCAAGTCTGACCAGG...CAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAAAGGACCCCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR GCA 90 bp TTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCCGCTGGCTCTTGTTCAGCAGCTCCTaGCTGGCTGTGGGGGTGATG +
Preference number: 4 (lower is better)
Translates to: LIKSGPGQQRRATLLRWLLFSSS*LAVGVM
Trigger: CATCACCCCCACAGCCAGGCAGGAGCTGCTGAACAA...GAGCCAGCGGAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR TCA 90 bp ATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCCGCTGGCTCTCGTTCGAAAAACACAAATGATCTaGCAGCCAGCAGAAGTGCCT +
Preference number: 4 (lower is better)
Translates to: IWSRTTEEGHSAPLALVRKTQMI*QPAEVP
Trigger: AGGCACTTCTGCTGGCTGTCAGATCATTTGTGTTTT...TCGAACGAGAGCCAGCGGAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR TCA 90 bp CAGCGCTTGCCAGGAGGATGGGAGCAGCTTTGTCGGACCCCCTGGGGACAGACCAGACCAATGTTAGTATaGATACTACAGGTCAAAACC +
Preference number: 4 (lower is better)
Translates to: QRLPGGWEQLCRTPWGQTRPMLV*ILQVKT
Trigger: GGTTTTGACCTGTAGTATTCATACTAACATTGGTCT...GGTCTGTCCCCAGGGGGTCCGACAAAGCTGCTCCCATCCTCCTGGCAAGCGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000170846.8
ENSMUST00000215370.2
CDS-3UTR TCA 90 bp TCAGCGCTTGCCAGGAGGATGGGAGCAGCTTTGTCGGACCCCCTGGGGACAGACCTAAGCTCCTGTTCTTaGATTCTCTTCTCATACAGA +
Preference number: 4 (lower is better)
Translates to: SALARRMGAALSDPLGTDLSSCS*ILFSYR
Trigger: TCTGTATGAGAAGAGAATTCAAGAACAGGAGCTTAG...GTCTGTCCCCAGGGGGTCCGACAAAGCTGCTCCCATCCTCCTGGCAAGCGCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000170846.8
ENSMUST00000215370.2
CDS-3UTR TCA 90 bp TTCAGGGGTCCTTTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCCAGGGCCATGGTGCTaGCAGGCTCTAAGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: FRGPLIKSGPGQQRRATLPGPWC*QALSSC
Trigger: ACAGGAGCTTAGAGCCTGTCAGCACCATGGCCCTGG...CAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAAAGGACCCCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR TCA 90 bp TTCAGGGGTCCTTTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGGGCTGCCGAGAGCTCTaGCAGCTGGAGACACTGGAA +
Preference number: 4 (lower is better)
Translates to: FRGPLIKSGPGQQRRATLGCREL*QLETLE
Trigger: TTCCAGTGTCTCCAGCTGTCAGAGCTCTCGGCAGCC...CAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAAAGGACCCCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR TCA 90 bp ATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCCGCTGGCTCTCGTTCGACCTCATTCTCTTCACTaGGGTCATTTTCTGTGCCAA +
Preference number: 4 (lower is better)
Translates to: IWSRTTEEGHSAPLALVRPHSLH*GHFLCQ
Trigger: TTGGCACAGAAAATGACCTCAGTGAAGAGAATGAGG...TCGAACGAGAGCCAGCGGAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR TCA 90 bp TTTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCCGCTGGCTTTGAGGAACTGGACTTaGGAGGAGAGGCAGCCCCGT +
Preference number: 4 (lower is better)
Translates to: FNKIWSRTTEEGHSAPLALRNWT*EERQPR
Trigger: ACGGGGCTGCCTCTCCTCTCAAGTCCAGTTCCTCAA...AGCCAGCGGAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR TCA 90 bp AGCTCAGCGCTTGCCAGGAGGATGGGAGCAGCTTTGTCGGACCCCCTGGGGACACAGTCTTATTGGGATTaGATAAGGTCACTTGTATCG +
Preference number: 4 (lower is better)
Translates to: SSALARRMGAALSDPLGTQSYWD*IRSLVS
Trigger: CGATACAAGTGACCTTATTCAATCCCAATAAGACTG...TGTCCCCAGGGGGTCCGACAAAGCTGCTCCCATCCTCCTGGCAAGCGCTGAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000170846.8
ENSMUST00000215370.2
CDS-3UTR GCA 90 bp TTCAGGGGTCCTTTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCCTGGGAAGCGAGACTaGGCTGGAGGGCAGTGGAAA +
Preference number: 4 (lower is better)
Translates to: FRGPLIKSGPGQQRRATLPGKRD*AGGQWK
Trigger: TTTCCACTGCCCTCCAGCGCAGTCTCGCTTCCCAGG...CAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAAAGGACCCCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR GCA 90 bp AGGGGTCCTTTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCTTGTTCAGCAGCTCCTaGCTGGCTGTGGGGGTGATG +
Preference number: 4 (lower is better)
Translates to: RGPLIKSGPGQQRRATLLLFSSS*LAVGVM
Trigger: CATCACCCCCACAGCCAGGCAGGAGCTGCTGAACAA...GAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAAAGGACCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR GCA 90 bp TTTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCCGCTGGCTTTGTTCAGCAGCTCCTaGCTGGCTGTGGGGGTGATG +
Preference number: 4 (lower is better)
Translates to: FNKIWSRTTEEGHSAPLALFSSS*LAVGVM
Trigger: CATCACCCCCACAGCCAGGCAGGAGCTGCTGAACAA...AGCCAGCGGAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR CCA 90 bp TTTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCCGCTGGCTCACTCACGGGTGCCATaGTCCATGTGTGCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: FNKIWSRTTEEGHSAPLAHSRVP*SMCACC
Trigger: GCAGCAAGCACACATGGACCATGGCACCCGTGAGTG...AGCCAGCGGAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR CCA 90 bp AGGGGTCCTTTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCCACTCACGGGTGCCATaGTCCATGTGTGCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: RGPLIKSGPGQQRRATLLHSRVP*SMCACC
Trigger: GCAGCAAGCACACATGGACCATGGCACCCGTGAGTG...GAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAAAGGACCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR CCA 90 bp TTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCCGCTGGCTCCTTGCTGCCTGTGCCTaGGCAGAGCCTGACATTTCT +
Preference number: 4 (lower is better)
Translates to: LIKSGPGQQRRATLLRWLLAACA*AEPDIS
Trigger: AGAAATGTCAGGCTCTGCCCAGGCACAGGCAGCAAG...GAGCCAGCGGAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR TCA 90 bp TTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCCGCTGGCTCTTCAAGGCCACATTGTaGGAGACATTGGGGACGGGA +
Preference number: 4 (lower is better)
Translates to: LIKSGPGQQRRATLLRWLFKATL*ETLGTG
Trigger: TCCCGTCCCCAATGTCTCTCACAATGTGGCCTTGAA...GAGCCAGCGGAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR TCA 90 bp CTCAGCGCTTGCCAGGAGGATGGGAGCAGCTTTGTCGGACCCCCTGGGGACAGAAGACCAATGTTAGTATaGATACTACAGGTCAAAACC +
Preference number: 4 (lower is better)
Translates to: LSACQEDGSSFVGPPGDRRPMLV*ILQVKT
Trigger: GGTTTTGACCTGTAGTATTCATACTAACATTGGTCT...TCTGTCCCCAGGGGGTCCGACAAAGCTGCTCCCATCCTCCTGGCAAGCGCTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000170846.8
ENSMUST00000215370.2
CDS-3UTR GCA 90 bp TTCAGGGGTCCTTTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGGGGCCAGCTTGTCGCTaGATTCATGTCTGGCCGTTC +
Preference number: 4 (lower is better)
Translates to: FRGPLIKSGPGQQRRATLGPACR*IHVWPF
Trigger: GAACGGCCAGACATGAATGCAGCGACAAGCTGGCCC...CAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAAAGGACCCCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR GCA 90 bp AGGGGTCCTTTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCGGGATCATTCAGATCTaGCCCCTCTGTACTAGGCCC +
Preference number: 4 (lower is better)
Translates to: RGPLIKSGPGQQRRATLLGIIQI*PLCTRP
Trigger: GGGCCTAGTACAGAGGGGGCAGATCTGAATGATCCC...GAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAAAGGACCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR GCA 90 bp TTTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCCGCTGGCTGGGATCATTCAGATCTaGCCCCTCTGTACTAGGCCC +
Preference number: 4 (lower is better)
Translates to: FNKIWSRTTEEGHSAPLAGIIQI*PLCTRP
Trigger: GGGCCTAGTACAGAGGGGGCAGATCTGAATGATCCC...AGCCAGCGGAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR GCA 90 bp CCGCTATCGACCTCCATGGACTTTCTAGAGAACAGGAGCCGGACATCTCTATGGGACAGCCAGCAGAAGTaGCTTCTCTTCGATGAAGCG +
Preference number: 4 (lower is better)
Translates to: PLSTSMDFLENRSRTSLWDSQQK*LLFDEA
Trigger: CGCTTCATCGAAGAGAAGGCACTTCTGCTGGCTGTC...CCATAGAGATGTCCGGCTCCTGTTCTCTAGAAAGTCCATGGAGGTCGATAGCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214755.2
CDS-3UTR GCA 90 bp TTCAGGGGTCCTTTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCAGGGCACTCACGGGTaGCATGGTCCATGTGTGCTT +
Preference number: 4 (lower is better)
Translates to: FRGPLIKSGPGQQRRATLQGTHG*HGPCVL
Trigger: AAGCACACATGGACCATGGCACCCGTGAGTGCCCTG...CAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAAAGGACCCCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR GCA 90 bp CCGGACATCTCTATGGAGGTAGATCTTTCCAGATTTAGAACTCTGGAACCTCAGCCTGGTCAGACTTGCTaGCTGTGCCTGGGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: PDISMEVDLSRFRTLEPQPGQTC*LCLGRA
Trigger: GGCTCTGCCCAGGCACAGGCAGCAAGTCTGACCAGG...CTGAGGTTCCAGAGTTCTAAATCTGGAAAGATCTACCTCCATAGAGATGTCCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214755.2
CDS-3UTR GCA 90 bp CTCAGCGCTTGCCAGGAGGATGGGAGCAGCTTTGTCGGACCCCCTGGGGACAGAAAAGGAGACAGAGAATaGTTCTTTATATCTCCTCAC +
Preference number: 4 (lower is better)
Translates to: LSACQEDGSSFVGPPGDRKGDRE*FFISPH
Trigger: GTGAGGAGATATAAAGAAGCATTCTCTGTCTCCTTT...TCTGTCCCCAGGGGGTCCGACAAAGCTGCTCCCATCCTCCTGGCAAGCGCTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000170846.8
ENSMUST00000215370.2
CDS-3UTR GCA 90 bp ATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCCGCTGGCTCTCGTTCGACAGAGACATTCTCTCTaGCCTTCTTCAACAAGGTTT +
Preference number: 4 (lower is better)
Translates to: IWSRTTEEGHSAPLALVRQRHSL*PSSTRF
Trigger: AAACCTTGTTGAAGAAGGGCAGAGAGAATGTCTCTG...TCGAACGAGAGCCAGCGGAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR CCA 90 bp CCGCTATCGACCTCCATGGACTTTCTAGAGAACAGGAGCCGGACATCTCTATGGATTCTGTCGGGGAACTaGCTCCAAGATCCACCTCTC +
Preference number: 4 (lower is better)
Translates to: PLSTSMDFLENRSRTSLWILSGN*LQDPPL
Trigger: GAGAGGTGGATCTTGGAGCCAGTTCCCCGACAGAAT...CCATAGAGATGTCCGGCTCCTGTTCTCTAGAAAGTCCATGGAGGTCGATAGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214755.2
CDS-3UTR CCA 90 bp TGGCGACTCAGTGTAGGATTTGAGTTCATACGCAGCACCGCTATCGACCTCCATCTTGCTGCCTGTGCCTaGGCAGAGCCTGACATTTCT +
Preference number: 4 (lower is better)
Translates to: WRLSVGFEFIRSTAIDLHLAACA*AEPDIS
Trigger: AGAAATGTCAGGCTCTGCCCAGGCACAGGCAGCAAG...ATGGAGGTCGATAGCGGTGCTGCGTATGAACTCAAATCCTACACTGAGTCGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214755.2
CDS-3UTR CCA 90 bp TTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCCGCTGGCTCGAGAGCTCTGACAGCTaGAGACACTGGAATCGACCA +
Preference number: 4 (lower is better)
Translates to: LIKSGPGQQRRATLLRWLESSDS*RHWNRP
Trigger: TGGTCGATTCCAGTGTCTCCAGCTGTCAGAGCTCTC...GAGCCAGCGGAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR TCA 90 bp TGGTTTCAACAGTACAAAAAGGGCGACGACACGGGTGCTTCCAGTCCACTTAGGGTGCCTTCTCTTCGATaGAGCGGTCACCATTCTGTC +
Preference number: 4 (lower is better)
Translates to: WFQQYKKGDDTGASSPLRVPSLR*SGHHSV
Trigger: GACAGAATGGTGACCGCTTCATCGAAGAGAAGGCAC...CCTAAGTGGACTGGAAGCACCCGTGTCGTCGCCCTTTTTGTACTGTTGAAACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR TCA 90 bp AGGGGTCCTTTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCGTGCCTTCTCTTCGATaGAGCGGTCACCATTCTGTC +
Preference number: 4 (lower is better)
Translates to: RGPLIKSGPGQQRRATLLVPSLR*SGHHSV
Trigger: GACAGAATGGTGACCGCTTCATCGAAGAGAAGGCAC...GAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAAAGGACCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR TCA 90 bp TTTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCCGCTGGCTTTCAAGGCCACATTGTaGGAGACATTGGGGACGGGA +
Preference number: 4 (lower is better)
Translates to: FNKIWSRTTEEGHSAPLAFKATL*ETLGTG
Trigger: TCCCGTCCCCAATGTCTCTCACAATGTGGCCTTGAA...AGCCAGCGGAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR TCA 90 bp AGGGGTCCTTTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCTGTCTGGGTAAGGACTaGACGCTGACTTTCAAGGCC +
Preference number: 4 (lower is better)
Translates to: RGPLIKSGPGQQRRATLLCLGKD*TLTFKA
Trigger: GGCCTTGAAAGTCAGCGTTCAGTCCTTACCCAGACA...GAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAAAGGACCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR TCA 90 bp GCATACCTCGTAGGTCATACACGACTACAAACATCTTCACCACAGTCTTATTGGCTCCCCCAGTGCCACTaGAGCCCAGGACACTGGCTT +
Preference number: 4 (lower is better)
Translates to: AYLVGHTRLQTSSPQSYWLPQCH*SPGHWL
Trigger: AAGCCAGTGTCCTGGGCTTCAGTGGCACTGGGGGAG...CCAATAAGACTGTGGTGAAGATGTTTGTAGTCGTGTATGACCTACGAGGTATGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000214755.2
CDS-3UTR TCA 90 bp ATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCCGCTGGCTCTCGTTCGACAGTCTTATTGGGATTaGATAAGGTCACTTGTATCG +
Preference number: 4 (lower is better)
Translates to: IWSRTTEEGHSAPLALVRQSYWD*IRSLVS
Trigger: CGATACAAGTGACCTTATTCAATCCCAATAAGACTG...TCGAACGAGAGCCAGCGGAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000215370.2
CDS-3UTR GCA 90 bp TTCAGGGGTCCTTTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCCAAGGCATCTTGTCTaGGGAGCCCTTTGTTCCCAC +
Preference number: 4 (lower is better)
Translates to: FRGPLIKSGPGQQRRATLPRHLV*GALCSH
Trigger: GTGGGAACAAAGGGCTCCGCAGACAAGATGCCTTGG...CAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAAAGGACCCCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081746.7
CDS-3UTR GCA 90 bp TGGTTTCAACAGTACAAAAAGGGCGACGACACGGGTGCTTCCAGTCCACTTAGGGCAGTGGAAACTCTCTaGACGGCCTTTCACAGAGCA +
Preference number: 4 (lower is better)
Translates to: WFQQYKKGDDTGASSPLRAVETL*TAFHRA
Trigger: TGCTCTGTGAAAGGCCGTGCAGAGAGTTTCCACTGC...CCTAAGTGGACTGGAAGCACCCGTGTCGTCGCCCTTTTTGTACTGTTGAAACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR GCA 90 bp TTTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCCGCTGGCTGACAGCCAGCAGAAGTaGCTTCTCTTCGATGAAGCG +
Preference number: 4 (lower is better)
Translates to: FNKIWSRTTEEGHSAPLADSQQK*LLFDEA
Trigger: CGCTTCATCGAAGAGAAGGCACTTCTGCTGGCTGTC...AGCCAGCGGAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR GCA 90 bp TGGTTTCAACAGTACAAAAAGGGCGACGACACGGGTGCTTCCAGTCCACTTAGGATAGGCTCTGTGAGCTaGTGGGACAACGGTACTCCA +
Preference number: 4 (lower is better)
Translates to: WFQQYKKGDDTGASSPLRIGSVS*WDNGTP
Trigger: TGGAGTACCGTTGTCCCAGCAGCTCACAGAGCCTAT...CCTAAGTGGACTGGAAGCACCCGTGTCGTCGCCCTTTTTGTACTGTTGAAACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR GCA 90 bp TTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCCGCTGGCTCACAGACTGTGAGAAGTaGAAGTTTCTCCTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LIKSGPGQQRRATLLRWLTDCEK*KFLLAW
Trigger: CCAGGCCAGGAGAAACTTGCACTTCTCACAGTCTGT...GAGCCAGCGGAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR GCA 90 bp GTAGCTCAGCGCTTGCCAGGAGGATGGGAGCAGCTTTGTCGGACCCCCTGGGGATCAATACTGTTGCAATaGAAACACTGTTTCTCAGTT +
Preference number: 4 (lower is better)
Translates to: VAQRLPGGWEQLCRTPWGSILLQ*KHCFSV
Trigger: AACTGAGAAACAGTGTTTGCATTGCAACAGTATTGA...TCCCCAGGGGGTCCGACAAAGCTGCTCCCATCCTCCTGGCAAGCGCTGAGCTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000170846.8
ENSMUST00000215370.2
CDS-3UTR GCA 90 bp GTAGCTCAGCGCTTGCCAGGAGGATGGGAGCAGCTTTGTCGGACCCCCTGGGGAGTTTGTCAATACTGTTaGAATGCAAACACTGTTTCT +
Preference number: 4 (lower is better)
Translates to: VAQRLPGGWEQLCRTPWGVCQYC*NANTVS
Trigger: AGAAACAGTGTTTGCATTGCAACAGTATTGACAAAC...TCCCCAGGGGGTCCGACAAAGCTGCTCCCATCCTCCTGGCAAGCGCTGAGCTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000170846.8
ENSMUST00000215370.2
CDS-3UTR GCA 90 bp GTAGCTCAGCGCTTGCCAGGAGGATGGGAGCAGCTTTGTCGGACCCCCTGGGGACCGTACATGTATTTGTaGAAATCTGTTTGTCAATAC +
Preference number: 4 (lower is better)
Translates to: VAQRLPGGWEQLCRTPWGPYMYL*KSVCQY
Trigger: GTATTGACAAACAGATTTGCACAAATACATGTACGG...TCCCCAGGGGGTCCGACAAAGCTGCTCCCATCCTCCTGGCAAGCGCTGAGCTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000170846.8
ENSMUST00000215370.2
CDS-3UTR CCA 90 bp AGGGGTCCTTTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCATTCTGTCGGGGAACTaGCTCCAAGATCCACCTCTC +
Preference number: 4 (lower is better)
Translates to: RGPLIKSGPGQQRRATLLILSGN*LQDPPL
Trigger: GAGAGGTGGATCTTGGAGCCAGTTCCCCGACAGAAT...GAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAAAGGACCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR CCA 90 bp TGGCGACTCAGTGTAGGATTTGAGTTCATACGCAGCACCGCTATCGACCTCCATGAGAGCTCTGACAGCTaGAGACACTGGAATCGACCA +
Preference number: 4 (lower is better)
Translates to: WRLSVGFEFIRSTAIDLHESSDS*RHWNRP
Trigger: TGGTCGATTCCAGTGTCTCCAGCTGTCAGAGCTCTC...ATGGAGGTCGATAGCGGTGCTGCGTATGAACTCAAATCCTACACTGAGTCGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214755.2
CDS-3UTR CCA 90 bp TTTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCCGCTGGCTTGGGGAGCCAAACTCTaGACTCCCAAAGGAGACAGA +
Preference number: 4 (lower is better)
Translates to: FNKIWSRTTEEGHSAPLAWGAKL*TPKGDR
Trigger: TCTGTCTCCTTTGGGAGTCCAGAGTTTGGCTCCCCA...AGCCAGCGGAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR CCA 90 bp TGGTTTCAACAGTACAAAAAGGGCGACGACACGGGTGCTTCCAGTCCACTTAGGTGGGGAGCCAAACTCTaGACTCCCAAAGGAGACAGA +
Preference number: 4 (lower is better)
Translates to: WFQQYKKGDDTGASSPLRWGAKL*TPKGDR
Trigger: TCTGTCTCCTTTGGGAGTCCAGAGTTTGGCTCCCCA...CCTAAGTGGACTGGAAGCACCCGTGTCGTCGCCCTTTTTGTACTGTTGAAACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR CCA 90 bp TTTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCCGCTGGCTACGTCCTGCCGCTCCTaGAGTAAAGAGCCAATCAGT +
Preference number: 4 (lower is better)
Translates to: FNKIWSRTTEEGHSAPLATSCRS*SKEPIS
Trigger: ACTGATTGGCTCTTTACTCCAGGAGCGGCAGGACGT...AGCCAGCGGAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR CCA 90 bp TGGTTTCAACAGTACAAAAAGGGCGACGACACGGGTGCTTCCAGTCCACTTAGGACGTCCTGCCGCTCCTaGAGTAAAGAGCCAATCAGT +
Preference number: 4 (lower is better)
Translates to: WFQQYKKGDDTGASSPLRTSCRS*SKEPIS
Trigger: ACTGATTGGCTCTTTACTCCAGGAGCGGCAGGACGT...CCTAAGTGGACTGGAAGCACCCGTGTCGTCGCCCTTTTTGTACTGTTGAAACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR CCA 90 bp TGGCGACTCAGTGTAGGATTTGAGTTCATACGCAGCACCGCTATCGACCTCCATACGTCCTGCCGCTCCTaGAGTAAAGAGCCAATCAGT +
Preference number: 4 (lower is better)
Translates to: WRLSVGFEFIRSTAIDLHTSCRS*SKEPIS
Trigger: ACTGATTGGCTCTTTACTCCAGGAGCGGCAGGACGT...ATGGAGGTCGATAGCGGTGCTGCGTATGAACTCAAATCCTACACTGAGTCGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214755.2
CDS-3UTR CCA 90 bp CTCAGCGCTTGCCAGGAGGATGGGAGCAGCTTTGTCGGACCCCCTGGGGACAGAACGTCTTGGATCTTTTaGAGTCTTTACTTGAACAAT +
Preference number: 4 (lower is better)
Translates to: LSACQEDGSSFVGPPGDRTSWIF*SLYLNN
Trigger: ATTGTTCAAGTAAAGACTCCAAAAGATCCAAGACGT...TCTGTCCCCAGGGGGTCCGACAAAGCTGCTCCCATCCTCCTGGCAAGCGCTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000170846.8
ENSMUST00000215370.2
CDS-3UTR CCA 90 bp AGCTCAGCGCTTGCCAGGAGGATGGGAGCAGCTTTGTCGGACCCCCTGGGGACAACGTCTTGGATCTTTTaGAGTCTTTACTTGAACAAT +
Preference number: 4 (lower is better)
Translates to: SSALARRMGAALSDPLGTTSWIF*SLYLNN
Trigger: ATTGTTCAAGTAAAGACTCCAAAAGATCCAAGACGT...TGTCCCCAGGGGGTCCGACAAAGCTGCTCCCATCCTCCTGGCAAGCGCTGAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000170846.8
ENSMUST00000215370.2
CDS-3UTR CCA 90 bp TTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCCGCTGGCTCGAGGATGAAAGGCTCTaGTTGATGTCCCATCCAAGG +
Preference number: 4 (lower is better)
Translates to: LIKSGPGQQRRATLLRWLEDERL*LMSHPR
Trigger: CCTTGGATGGGACATCAACCAGAGCCTTTCATCCTC...GAGCCAGCGGAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR TCA 90 bp TTCAGGGGTCCTTTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGGTGCCTTCTCTTCGATaGAGCGGTCACCATTCTGTC +
Preference number: 4 (lower is better)
Translates to: FRGPLIKSGPGQQRRATLVPSLR*SGHHSV
Trigger: GACAGAATGGTGACCGCTTCATCGAAGAGAAGGCAC...CAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAAAGGACCCCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR TCA 90 bp AGGGGTCCTTTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCCGTGGAATAGCACCATaGGAAACACTCAGCCAAGCA +
Preference number: 4 (lower is better)
Translates to: RGPLIKSGPGQQRRATLLRGIAP*ETLSQA
Trigger: TGCTTGGCTGAGTGTTTCTCATGGTGCTATTCCACG...GAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAAAGGACCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR TCA 90 bp AGGGGTCCTTTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCCTCAGTTGGAGTCTGTaGAAAACTCCACTGCAGGTC +
Preference number: 4 (lower is better)
Translates to: RGPLIKSGPGQQRRATLLLSWSL*KTPLQV
Trigger: GACCTGCAGTGGAGTTTTTCACAGACTCCAACTGAG...GAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAAAGGACCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR TCA 90 bp TTCAGGGGTCCTTTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGTGTCTGGGTAAGGACTaGACGCTGACTTTCAAGGCC +
Preference number: 4 (lower is better)
Translates to: FRGPLIKSGPGQQRRATLCLGKD*TLTFKA
Trigger: GGCCTTGAAAGTCAGCGTTCAGTCCTTACCCAGACA...CAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAAAGGACCCCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR TCA 90 bp ATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCCGCTGGCTCTCGTTCGAAGACCAATGTTAGTATaGATACTACAGGTCAAAACC +
Preference number: 4 (lower is better)
Translates to: IWSRTTEEGHSAPLALVRRPMLV*ILQVKT
Trigger: GGTTTTGACCTGTAGTATTCATACTAACATTGGTCT...TCGAACGAGAGCCAGCGGAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR TCA 90 bp AGGGGTCCTTTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCTCCTGTGAAACTGGGTaGAGCTTTGGGCTAAGTGAC +
Preference number: 4 (lower is better)
Translates to: RGPLIKSGPGQQRRATLLSCETG*SFGLSD
Trigger: GTCACTTAGCCCAAAGCTTCACCCAGTTTCACAGGA...GAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAAAGGACCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR TCA 90 bp TGGTTTCAACAGTACAAAAAGGGCGACGACACGGGTGCTTCCAGTCCACTTAGGACACCCACTTTCCTGTaGAACTGGGTGAAGCTTTGG +
Preference number: 4 (lower is better)
Translates to: WFQQYKKGDDTGASSPLRTPTFL*NWVKLW
Trigger: CCAAAGCTTCACCCAGTTTCACAGGAAAGTGGGTGT...CCTAAGTGGACTGGAAGCACCCGTGTCGTCGCCCTTTTTGTACTGTTGAAACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR TCA 90 bp TTTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCCGCTGGCTCGAGGGTACAGACTGTaGGAAGTGCAAGTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: FNKIWSRTTEEGHSAPLARGYRL*EVQVSP
Trigger: AGGAGAAACTTGCACTTCTCACAGTCTGTACCCTCG...AGCCAGCGGAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR TCA 90 bp TGGCGACTCAGTGTAGGATTTGAGTTCATACGCAGCACCGCTATCGACCTCCATCGAGGGTACAGACTGTaGGAAGTGCAAGTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: WRLSVGFEFIRSTAIDLHRGYRL*EVQVSP
Trigger: AGGAGAAACTTGCACTTCTCACAGTCTGTACCCTCG...ATGGAGGTCGATAGCGGTGCTGCGTATGAACTCAAATCCTACACTGAGTCGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214755.2
CDS-3UTR TCA 90 bp ATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCCGCTGGCTCTCGTTCGATTCAAAGGCTTTTCTTaGGGGCTGTATTTGAAAGAT +
Preference number: 4 (lower is better)
Translates to: IWSRTTEEGHSAPLALVRFKGFS*GLYLKD
Trigger: ATCTTTCAAATACAGCCCTCAAGAAAAGCCTTTGAA...TCGAACGAGAGCCAGCGGAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR TCA 90 bp TTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCCGCTGGCTCATGAAAGGCTCTGGTTaGTGTCCCATCCAAGGAATG +
Preference number: 4 (lower is better)
Translates to: LIKSGPGQQRRATLLRWLMKGSG*CPIQGM
Trigger: CATTCCTTGGATGGGACATCAACCAGAGCCTTTCAT...GAGCCAGCGGAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR TCA 90 bp CAGGAGCCGGACATCTCTATGGAGGTAGATCTTTCCAGATTTAGAACTCTGGAATTGAGGAACTGGACTTaGGAGGAGAGGCAGCCCCGT +
Preference number: 4 (lower is better)
Translates to: QEPDISMEVDLSRFRTLELRNWT*EERQPR
Trigger: ACGGGGCTGCCTCTCCTCTCAAGTCCAGTTCCTCAA...TTCCAGAGTTCTAAATCTGGAAAGATCTACCTCCATAGAGATGTCCGGCTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214755.2
CDS-3UTR TCA 90 bp TTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCCGCTGGCTCCACTTGTATCGTTCCTaGAGGAGGTACTCGATAACC +
Preference number: 4 (lower is better)
Translates to: LIKSGPGQQRRATLLRWLHLYRS*RRYSIT
Trigger: GGTTATCGAGTACCTCCTTCAGGAACGATACAAGTG...GAGCCAGCGGAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR GCA 90 bp TTTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCCGCTGGCTGGGACGGGAAACACATaGTCAGTTGGAGTCTGTGAA +
Preference number: 4 (lower is better)
Translates to: FNKIWSRTTEEGHSAPLAGTGNT*SVGVCE
Trigger: TTCACAGACTCCAACTGAGCATGTGTTTCCCGTCCC...AGCCAGCGGAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR GCA 90 bp TTCAGGGGTCCTTTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGATAGGCTCTGTGAGCTaGTGGGACAACGGTACTCCA +
Preference number: 4 (lower is better)
Translates to: FRGPLIKSGPGQQRRATLIGSVS*WDNGTP
Trigger: TGGAGTACCGTTGTCCCAGCAGCTCACAGAGCCTAT...CAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAAAGGACCCCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR GCA 90 bp TTTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCCGCTGGCTACAGACTGTGAGAAGTaGAAGTTTCTCCTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: FNKIWSRTTEEGHSAPLATDCEK*KFLLAW
Trigger: CCAGGCCAGGAGAAACTTGCACTTCTCACAGTCTGT...AGCCAGCGGAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR CCA 90 bp TTCAGGGGTCCTTTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGTGGGGAGCCAAACTCTaGACTCCCAAAGGAGACAGA +
Preference number: 4 (lower is better)
Translates to: FRGPLIKSGPGQQRRATLWGAKL*TPKGDR
Trigger: TCTGTCTCCTTTGGGAGTCCAGAGTTTGGCTCCCCA...CAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAAAGGACCCCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR CCA 90 bp AGGGGTCCTTTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCGAGGATGAAAGGCTCTaGTTGATGTCCCATCCAAGG +
Preference number: 4 (lower is better)
Translates to: RGPLIKSGPGQQRRATLLEDERL*LMSHPR
Trigger: CCTTGGATGGGACATCAACCAGAGCCTTTCATCCTC...GAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAAAGGACCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR TCA 90 bp TTCAGGGGTCCTTTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGTCCTGTGAAACTGGGTaGAGCTTTGGGCTAAGTGAC +
Preference number: 4 (lower is better)
Translates to: FRGPLIKSGPGQQRRATLSCETG*SFGLSD
Trigger: GTCACTTAGCCCAAAGCTTCACCCAGTTTCACAGGA...CAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAAAGGACCCCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR TCA 90 bp CCGCTATCGACCTCCATGGACTTTCTAGAGAACAGGAGCCGGACATCTCTATGGCCTCATTCTCTTCACTaGGGTCATTTTCTGTGCCAA +
Preference number: 4 (lower is better)
Translates to: PLSTSMDFLENRSRTSLWPHSLH*GHFLCQ
Trigger: TTGGCACAGAAAATGACCTCAGTGAAGAGAATGAGG...CCATAGAGATGTCCGGCTCCTGTTCTCTAGAAAGTCCATGGAGGTCGATAGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214755.2
CDS-3UTR TCA 90 bp TGGTTTCAACAGTACAAAAAGGGCGACGACACGGGTGCTTCCAGTCCACTTAGGATGAAAGGCTCTGGTTaGTGTCCCATCCAAGGAATG +
Preference number: 4 (lower is better)
Translates to: WFQQYKKGDDTGASSPLRMKGSG*CPIQGM
Trigger: CATTCCTTGGATGGGACATCAACCAGAGCCTTTCAT...CCTAAGTGGACTGGAAGCACCCGTGTCGTCGCCCTTTTTGTACTGTTGAAACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR TCA 90 bp AGGGGTCCTTTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCCACTTGTATCGTTCCTaGAGGAGGTACTCGATAACC +
Preference number: 4 (lower is better)
Translates to: RGPLIKSGPGQQRRATLLHLYRS*RRYSIT
Trigger: GGTTATCGAGTACCTCCTTCAGGAACGATACAAGTG...GAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAAAGGACCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR GCA 90 bp ATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCCGCTGGCTCTCGTTCGAGTTTGTCAATACTGTTaGAATGCAAACACTGTTTCT +
Preference number: 4 (lower is better)
Translates to: IWSRTTEEGHSAPLALVRVCQYC*NANTVS
Trigger: AGAAACAGTGTTTGCATTGCAACAGTATTGACAAAC...TCGAACGAGAGCCAGCGGAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR GCA 90 bp AGGGGTCCTTTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCTCCCTTTTTGCCTCCTaGTCAGTTTTGAGTCGGTCT +
Preference number: 4 (lower is better)
Translates to: RGPLIKSGPGQQRRATLLSLFAS*SVLSRS
Trigger: AGACCGACTCAAAACTGAGCAGGAGGCAAAAAGGGA...GAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAAAGGACCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR GCA 90 bp TTTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCCGCTGGCTTCCCTTTTTGCCTCCTaGTCAGTTTTGAGTCGGTCT +
Preference number: 4 (lower is better)
Translates to: FNKIWSRTTEEGHSAPLASLFAS*SVLSRS
Trigger: AGACCGACTCAAAACTGAGCAGGAGGCAAAAAGGGA...AGCCAGCGGAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR CCA 90 bp TGGTTTCAACAGTACAAAAAGGGCGACGACACGGGTGCTTCCAGTCCACTTAGGCATTGTGAGAGACATTaGGGACGGGAAACACATGCT +
Preference number: 4 (lower is better)
Translates to: WFQQYKKGDDTGASSPLRHCERH*GRETHA
Trigger: AGCATGTGTTTCCCGTCCCCAATGTCTCTCACAATG...CCTAAGTGGACTGGAAGCACCCGTGTCGTCGCCCTTTTTGTACTGTTGAAACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR CCA 90 bp TGGCGACTCAGTGTAGGATTTGAGTTCATACGCAGCACCGCTATCGACCTCCATCATTGTGAGAGACATTaGGGACGGGAAACACATGCT +
Preference number: 4 (lower is better)
Translates to: WRLSVGFEFIRSTAIDLHHCERH*GRETHA
Trigger: AGCATGTGTTTCCCGTCCCCAATGTCTCTCACAATG...ATGGAGGTCGATAGCGGTGCTGCGTATGAACTCAAATCCTACACTGAGTCGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214755.2
CDS-3UTR CCA 90 bp GCATACCTCGTAGGTCATACACGACTACAAACATCTTCACCACAGTCTTATTGGCACTCACGGGTGCCATaGTCCATGTGTGCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: AYLVGHTRLQTSSPQSYWHSRVP*SMCACC
Trigger: GCAGCAAGCACACATGGACCATGGCACCCGTGAGTG...CCAATAAGACTGTGGTGAAGATGTTTGTAGTCGTGTATGACCTACGAGGTATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214755.2
CDS-3UTR CCA 90 bp ATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCCGCTGGCTCTCGTTCGAACGTCTTGGATCTTTTaGAGTCTTTACTTGAACAAT +
Preference number: 4 (lower is better)
Translates to: IWSRTTEEGHSAPLALVRTSWIF*SLYLNN
Trigger: ATTGTTCAAGTAAAGACTCCAAAAGATCCAAGACGT...TCGAACGAGAGCCAGCGGAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR TCA 90 bp GAGCCGGACATCTCTATGGAGGTAGATCTTTCCAGATTTAGAACTCTGGAACCTTGTCTGGGTAAGGACTaGACGCTGACTTTCAAGGCC +
Preference number: 4 (lower is better)
Translates to: EPDISMEVDLSRFRTLEPCLGKD*TLTFKA
Trigger: GGCCTTGAAAGTCAGCGTTCAGTCCTTACCCAGACA...AGGTTCCAGAGTTCTAAATCTGGAAAGATCTACCTCCATAGAGATGTCCGGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214755.2
CDS-3UTR TCA 90 bp TGGTTTCAACAGTACAAAAAGGGCGACGACACGGGTGCTTCCAGTCCACTTAGGCCTCATTCTCTTCACTaGGGTCATTTTCTGTGCCAA +
Preference number: 4 (lower is better)
Translates to: WFQQYKKGDDTGASSPLRPHSLH*GHFLCQ
Trigger: TTGGCACAGAAAATGACCTCAGTGAAGAGAATGAGG...CCTAAGTGGACTGGAAGCACCCGTGTCGTCGCCCTTTTTGTACTGTTGAAACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR TCA 90 bp TTCAGGGGTCCTTTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCACTTGTATCGTTCCTaGAGGAGGTACTCGATAACC +
Preference number: 4 (lower is better)
Translates to: FRGPLIKSGPGQQRRATLHLYRS*RRYSIT
Trigger: GGTTATCGAGTACCTCCTTCAGGAACGATACAAGTG...CAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAAAGGACCCCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR GCA 90 bp CGTGTGCTGGACGTTCTCTTTGTTAATACTTCTCTTCATCTCTTGTTTAACAGGCCTGGGAAGCGAGACTaGGCTGGAGGGCAGTGGAAA +
Preference number: 4 (lower is better)
Translates to: RVLDVLFVNTSLHLLFNRPGKRD*AGGQWK
Trigger: TTTCCACTGCCCTCCAGCGCAGTCTCGCTTCCCAGG...CCTGTTAAACAAGAGATGAAGAGAAGTATTAACAAAGAGAACGTCCAGCACACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214755.2
CDS-3UTR TCA 90 bp TCTGGTGATTGGCTGGCATACCTCGTAGGTCATACACGACTACAAACATCTTCACTCAGTTGGAGTCTGTaGAAAACTCCACTGCAGGTC +
Preference number: 4 (lower is better)
Translates to: SGDWLAYLVGHTRLQTSSLSWSL*KTPLQV
Trigger: GACCTGCAGTGGAGTTTTTCACAGACTCCAACTGAG...TGAAGATGTTTGTAGTCGTGTATGACCTACGAGGTATGCCAGCCAATCACCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214755.2
CDS-3UTR TCA 90 bp GAGCCGGACATCTCTATGGAGGTAGATCTTTCCAGATTTAGAACTCTGGAACCTTCCTGTGAAACTGGGTaGAGCTTTGGGCTAAGTGAC +
Preference number: 4 (lower is better)
Translates to: EPDISMEVDLSRFRTLEPSCETG*SFGLSD
Trigger: GTCACTTAGCCCAAAGCTTCACCCAGTTTCACAGGA...AGGTTCCAGAGTTCTAAATCTGGAAAGATCTACCTCCATAGAGATGTCCGGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214755.2
CDS-3UTR TCA 90 bp CAGGAGCCGGACATCTCTATGGAGGTAGATCTTTCCAGATTTAGAACTCTGGAAACACCCACTTTCCTGTaGAACTGGGTGAAGCTTTGG +
Preference number: 4 (lower is better)
Translates to: QEPDISMEVDLSRFRTLETPTFL*NWVKLW
Trigger: CCAAAGCTTCACCCAGTTTCACAGGAAAGTGGGTGT...TTCCAGAGTTCTAAATCTGGAAAGATCTACCTCCATAGAGATGTCCGGCTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214755.2
CDS-3UTR TCA 90 bp TTCAGGGGTCCTTTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCCTCATTCTCTTCACTaGGGTCATTTTCTGTGCCAA +
Preference number: 4 (lower is better)
Translates to: FRGPLIKSGPGQQRRATLPHSLH*GHFLCQ
Trigger: TTGGCACAGAAAATGACCTCAGTGAAGAGAATGAGG...CAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAAAGGACCCCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR TCA 90 bp TTTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCCGCTGGCTTTTCCTCCAGACACTTaGATGTTTCAGTGTAGTCCT +
Preference number: 4 (lower is better)
Translates to: FNKIWSRTTEEGHSAPLAFPPDT*MFQCSP
Trigger: AGGACTACACTGAAACATTCAAGTGTCTGGAGGAAA...AGCCAGCGGAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR TCA 90 bp TGGTTTCAACAGTACAAAAAGGGCGACGACACGGGTGCTTCCAGTCCACTTAGGTTTCCTCCAGACACTTaGATGTTTCAGTGTAGTCCT +
Preference number: 4 (lower is better)
Translates to: WFQQYKKGDDTGASSPLRFPPDT*MFQCSP
Trigger: AGGACTACACTGAAACATTCAAGTGTCTGGAGGAAA...CCTAAGTGGACTGGAAGCACCCGTGTCGTCGCCCTTTTTGTACTGTTGAAACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR TCA 90 bp TTCAGGGGTCCTTTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGGACTGTGTTTTTCTTTaGGGAACTGGACTTGAGAGG +
Preference number: 4 (lower is better)
Translates to: FRGPLIKSGPGQQRRATLDCVFL*GTGLER
Trigger: CCTCTCAAGTCCAGTTCCTCAAAGAAAAACACAGTC...CAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAAAGGACCCCTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR GCA 90 bp TTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCCGCTGGCTCGACCAAGAACTCCTCTaGGTCATATTCAAAATACTC +
Preference number: 4 (lower is better)
Translates to: LIKSGPGQQRRATLLRWLDQELL*VIFKIL
Trigger: GAGTATTTTGAATATGACGCAGAGGAGTTCTTGGTC...GAGCCAGCGGAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR GCA 90 bp GTTGTTGCAGCAGCAGTAGCAGGAGAAAGGGCTAAGTTCTATATGTGTGAGAGAACAGACTGTGAGAAGTaGAAGTTTCTCCTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: VVAAAVAGERAKFYMCERTDCEK*KFLLAW
Trigger: CCAGGCCAGGAGAAACTTGCACTTCTCACAGTCTGT...TCTCTCACACATATAGAACTTAGCCCTTTCTCCTGCTACTGCTGCTGCAACAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214755.2
CDS-3UTR GCA 90 bp TTTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCCGCTGGCTCAGAGACATTCTCTCTaGCCTTCTTCAACAAGGTTT +
Preference number: 4 (lower is better)
Translates to: FNKIWSRTTEEGHSAPLAQRHSL*PSSTRF
Trigger: AAACCTTGTTGAAGAAGGGCAGAGAGAATGTCTCTG...AGCCAGCGGAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR GCA 90 bp CGTGTGCTGGACGTTCTCTTTGTTAATACTTCTCTTCATCTCTTGTTTAACAGGTTGTTCAGCAGCTCCTaGCTGGCTGTGGGGGTGATG +
Preference number: 4 (lower is better)
Translates to: RVLDVLFVNTSLHLLFNRLFSSS*LAVGVM
Trigger: CATCACCCCCACAGCCAGGCAGGAGCTGCTGAACAA...CCTGTTAAACAAGAGATGAAGAGAAGTATTAACAAAGAGAACGTCCAGCACACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000214755.2
CDS-3UTR CCA 90 bp AGGGGTCCTTTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCAACTGTGCCGTGTGCTaGACGTTCTCTTTGTTAATA +
Preference number: 4 (lower is better)
Translates to: RGPLIKSGPGQQRRATLLNCAVC*TFSLLI
Trigger: TATTAACAAAGAGAACGTCCAGCACACGGCACAGTT...GAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAAAGGACCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000215370.2
CDS-3UTR CCA 90 bp AGGGGTCCTTTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCAAACTGAGGGTTTGTTaGCGACTCAGTGTAGGATTT +
Preference number: 4 (lower is better)
Translates to: RGPLIKSGPGQQRRATLLKLRVC*RLSVGF
Trigger: AAATCCTACACTGAGTCGCCAACAAACCCTCAGTTT...GAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAAAGGACCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000215370.2
CDS-3UTR CCA 90 bp TGGTTTCAACAGTACAAAAAGGGCGACGACACGGGTGCTTCCAGTCCACTTAGGAAACTGAGGGTTTGTTaGCGACTCAGTGTAGGATTT +
Preference number: 4 (lower is better)
Translates to: WFQQYKKGDDTGASSPLRKLRVC*RLSVGF
Trigger: AAATCCTACACTGAGTCGCCAACAAACCCTCAGTTT...CCTAAGTGGACTGGAAGCACCCGTGTCGTCGCCCTTTTTGTACTGTTGAAACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000215370.2
CDS-3UTR CCA 90 bp TTTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCCGCTGGCTAAACTGAGGGTTTGTTaGCGACTCAGTGTAGGATTT +
Preference number: 4 (lower is better)
Translates to: FNKIWSRTTEEGHSAPLAKLRVC*RLSVGF
Trigger: AAATCCTACACTGAGTCGCCAACAAACCCTCAGTTT...AGCCAGCGGAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000215370.2
CDS-3UTR TCA 90 bp GCATACCTCGTAGGTCATACACGACTACAAACATCTTCACCACAGTCTTATTGGCGTGGAATAGCACCATaGGAAACACTCAGCCAAGCA +
Preference number: 4 (lower is better)
Translates to: AYLVGHTRLQTSSPQSYWRGIAP*ETLSQA
Trigger: TGCTTGGCTGAGTGTTTCTCATGGTGCTATTCCACG...CCAATAAGACTGTGGTGAAGATGTTTGTAGTCGTGTATGACCTACGAGGTATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214755.2
CDS-3UTR TCA 90 bp TGGTTTCAACAGTACAAAAAGGGCGACGACACGGGTGCTTCCAGTCCACTTAGGCTAAGCTCCTGTTCTTaGATTCTCTTCTCATACAGA +
Preference number: 4 (lower is better)
Translates to: WFQQYKKGDDTGASSPLRLSSCS*ILFSYR
Trigger: TCTGTATGAGAAGAGAATTCAAGAACAGGAGCTTAG...CCTAAGTGGACTGGAAGCACCCGTGTCGTCGCCCTTTTTGTACTGTTGAAACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR TCA 90 bp TGGCGACTCAGTGTAGGATTTGAGTTCATACGCAGCACCGCTATCGACCTCCATCTAAGCTCCTGTTCTTaGATTCTCTTCTCATACAGA +
Preference number: 4 (lower is better)
Translates to: WRLSVGFEFIRSTAIDLHLSSCS*ILFSYR
Trigger: TCTGTATGAGAAGAGAATTCAAGAACAGGAGCTTAG...ATGGAGGTCGATAGCGGTGCTGCGTATGAACTCAAATCCTACACTGAGTCGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214755.2
CDS-3UTR TCA 90 bp TTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCCGCTGGCTCTTCAAAGGCTTTTCTTaGGGGCTGTATTTGAAAGAT +
Preference number: 4 (lower is better)
Translates to: LIKSGPGQQRRATLLRWLFKGFS*GLYLKD
Trigger: ATCTTTCAAATACAGCCCTCAAGAAAAGCCTTTGAA...GAGCCAGCGGAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR TCA 90 bp CCGGACATCTCTATGGAGGTAGATCTTTCCAGATTTAGAACTCTGGAACCTCAGCACTTGTATCGTTCCTaGAGGAGGTACTCGATAACC +
Preference number: 4 (lower is better)
Translates to: PDISMEVDLSRFRTLEPQHLYRS*RRYSIT
Trigger: GGTTATCGAGTACCTCCTTCAGGAACGATACAAGTG...CTGAGGTTCCAGAGTTCTAAATCTGGAAAGATCTACCTCCATAGAGATGTCCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214755.2
CDS-3UTR TCA 90 bp AGGGGTCCTTTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCCAGTCTTATTGGGATTaGATAAGGTCACTTGTATCG +
Preference number: 4 (lower is better)
Translates to: RGPLIKSGPGQQRRATLLQSYWD*IRSLVS
Trigger: CGATACAAGTGACCTTATTCAATCCCAATAAGACTG...GAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAAAGGACCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000215370.2
CDS-3UTR GCA 90 bp TGGCGACTCAGTGTAGGATTTGAGTTCATACGCAGCACCGCTATCGACCTCCATGACCAAGAACTCCTCTaGGTCATATTCAAAATACTC +
Preference number: 4 (lower is better)
Translates to: WRLSVGFEFIRSTAIDLHDQELL*VIFKIL
Trigger: GAGTATTTTGAATATGACGCAGAGGAGTTCTTGGTC...ATGGAGGTCGATAGCGGTGCTGCGTATGAACTCAAATCCTACACTGAGTCGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214755.2
CDS-3UTR GCA 90 bp TTCAGGGGTCCTTTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCAGAGACATTCTCTCTaGCCTTCTTCAACAAGGTTT +
Preference number: 4 (lower is better)
Translates to: FRGPLIKSGPGQQRRATLQRHSL*PSSTRF
Trigger: AAACCTTGTTGAAGAAGGGCAGAGAGAATGTCTCTG...CAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAAAGGACCCCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR TCA 90 bp TTTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCCGCTGGCTAGACCAATGTTAGTATaGATACTACAGGTCAAAACC +
Preference number: 4 (lower is better)
Translates to: FNKIWSRTTEEGHSAPLARPMLV*ILQVKT
Trigger: GGTTTTGACCTGTAGTATTCATACTAACATTGGTCT...AGCCAGCGGAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR TCA 90 bp TTCAGGGGTCCTTTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTAAGCTCCTGTTCTTaGATTCTCTTCTCATACAGA +
Preference number: 4 (lower is better)
Translates to: FRGPLIKSGPGQQRRATLLSSCS*ILFSYR
Trigger: TCTGTATGAGAAGAGAATTCAAGAACAGGAGCTTAG...CAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAAAGGACCCCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR TCA 90 bp CAGGAGCCGGACATCTCTATGGAGGTAGATCTTTCCAGATTTAGAACTCTGGAAGACTGTGTTTTTCTTTaGGGAACTGGACTTGAGAGG +
Preference number: 4 (lower is better)
Translates to: QEPDISMEVDLSRFRTLEDCVFL*GTGLER
Trigger: CCTCTCAAGTCCAGTTCCTCAAAGAAAAACACAGTC...TTCCAGAGTTCTAAATCTGGAAAGATCTACCTCCATAGAGATGTCCGGCTCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000214755.2
CDS-3UTR GCA 90 bp TTCAGGGGTCCTTTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGGACCAAGAACTCCTCTaGGTCATATTCAAAATACTC +
Preference number: 4 (lower is better)
Translates to: FRGPLIKSGPGQQRRATLDQELL*VIFKIL
Trigger: GAGTATTTTGAATATGACGCAGAGGAGTTCTTGGTC...CAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAAAGGACCCCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR GCA 90 bp AGGGGTCCTTTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCAAAGGAGACAGAGAATaGTTCTTTATATCTCCTCAC +
Preference number: 4 (lower is better)
Translates to: RGPLIKSGPGQQRRATLLKGDRE*FFISPH
Trigger: GTGAGGAGATATAAAGAAGCATTCTCTGTCTCCTTT...GAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAAAGGACCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR GCA 90 bp CCGCTATCGACCTCCATGGACTTTCTAGAGAACAGGAGCCGGACATCTCTATGGTCAATACTGTTGCAATaGAAACACTGTTTCTCAGTT +
Preference number: 4 (lower is better)
Translates to: PLSTSMDFLENRSRTSLWSILLQ*KHCFSV
Trigger: AACTGAGAAACAGTGTTTGCATTGCAACAGTATTGA...CCATAGAGATGTCCGGCTCCTGTTCTCTAGAAAGTCCATGGAGGTCGATAGCGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214755.2
CDS-3UTR GCA 90 bp TTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCCGCTGGCTCCCGTACATGTATTTGTaGAAATCTGTTTGTCAATAC +
Preference number: 4 (lower is better)
Translates to: LIKSGPGQQRRATLLRWLPYMYL*KSVCQY
Trigger: GTATTGACAAACAGATTTGCACAAATACATGTACGG...GAGCCAGCGGAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR CCA 90 bp TTTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCCGCTGGCTGTAAAGAATGTTTCGTaGAATAGCACCATGAGAAAC +
Preference number: 4 (lower is better)
Translates to: FNKIWSRTTEEGHSAPLAVKNVS*NSTMRN
Trigger: GTTTCTCATGGTGCTATTCCACGAAACATTCTTTAC...AGCCAGCGGAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR TCA 90 bp TTCAGGGGTCCTTTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGTTCAAAGGCTTTTCTTaGGGGCTGTATTTGAAAGAT +
Preference number: 4 (lower is better)
Translates to: FRGPLIKSGPGQQRRATLFKGFS*GLYLKD
Trigger: ATCTTTCAAATACAGCCCTCAAGAAAAGCCTTTGAA...CAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAAAGGACCCCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR GCA 90 bp GCCGTGTGCTGGACGTTCTCTTTGTTAATACTTCTCTTCATCTCTTGTTTAACAGGGACGGGAAACACATaGTCAGTTGGAGTCTGTGAA +
Preference number: 4 (lower is better)
Translates to: AVCWTFSLLILLFISCLTGTGNT*SVGVCE
Trigger: TTCACAGACTCCAACTGAGCATGTGTTTCCCGTCCC...TGTTAAACAAGAGATGAAGAGAAGTATTAACAAAGAGAACGTCCAGCACACGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214755.2
CDS-3UTR GCA 90 bp TTCAGGGGTCCTTTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGAAAGGAGACAGAGAATaGTTCTTTATATCTCCTCAC +
Preference number: 4 (lower is better)
Translates to: FRGPLIKSGPGQQRRATLKGDRE*FFISPH
Trigger: GTGAGGAGATATAAAGAAGCATTCTCTGTCTCCTTT...CAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAAAGGACCCCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR GCA 90 bp GAGCCGGACATCTCTATGGAGGTAGATCTTTCCAGATTTAGAACTCTGGAACCTCAGAGACATTCTCTCTaGCCTTCTTCAACAAGGTTT +
Preference number: 4 (lower is better)
Translates to: EPDISMEVDLSRFRTLEPQRHSL*PSSTRF
Trigger: AAACCTTGTTGAAGAAGGGCAGAGAGAATGTCTCTG...AGGTTCCAGAGTTCTAAATCTGGAAAGATCTACCTCCATAGAGATGTCCGGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214755.2
CDS-3UTR GCA 90 bp AGGGGTCCTTTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCGTTTGTCAATACTGTTaGAATGCAAACACTGTTTCT +
Preference number: 4 (lower is better)
Translates to: RGPLIKSGPGQQRRATLLVCQYC*NANTVS
Trigger: AGAAACAGTGTTTGCATTGCAACAGTATTGACAAAC...GAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAAAGGACCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR GCA 90 bp TGGTTTCAACAGTACAAAAAGGGCGACGACACGGGTGCTTCCAGTCCACTTAGGCCGTACATGTATTTGTaGAAATCTGTTTGTCAATAC +
Preference number: 4 (lower is better)
Translates to: WFQQYKKGDDTGASSPLRPYMYL*KSVCQY
Trigger: GTATTGACAAACAGATTTGCACAAATACATGTACGG...CCTAAGTGGACTGGAAGCACCCGTGTCGTCGCCCTTTTTGTACTGTTGAAACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR GCA 90 bp AGGGGTCCTTTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCCCGTACATGTATTTGTaGAAATCTGTTTGTCAATAC +
Preference number: 4 (lower is better)
Translates to: RGPLIKSGPGQQRRATLLPYMYL*KSVCQY
Trigger: GTATTGACAAACAGATTTGCACAAATACATGTACGG...GAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAAAGGACCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR CCA 90 bp GCCGTGTGCTGGACGTTCTCTTTGTTAATACTTCTCTTCATCTCTTGTTTAACAGAGGATGAAAGGCTCTaGTTGATGTCCCATCCAAGG +
Preference number: 4 (lower is better)
Translates to: AVCWTFSLLILLFISCLTEDERL*LMSHPR
Trigger: CCTTGGATGGGACATCAACCAGAGCCTTTCATCCTC...TGTTAAACAAGAGATGAAGAGAAGTATTAACAAAGAGAACGTCCAGCACACGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214755.2
CDS-3UTR GCA 90 bp GGATTTGAGTTCATACGCAGCACCGCTATCGACCTCCATGGACTTTCTAGAGAAAAAGGAGACAGAGAATaGTTCTTTATATCTCCTCAC +
Preference number: 4 (lower is better)
Translates to: GFEFIRSTAIDLHGLSREKGDRE*FFISPH
Trigger: GTGAGGAGATATAAAGAAGCATTCTCTGTCTCCTTT...TTCTCTAGAAAGTCCATGGAGGTCGATAGCGGTGCTGCGTATGAACTCAAATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000214755.2
CDS-3UTR GCA 90 bp TTCAGGGGTCCTTTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGTCAATACTGTTGCAATaGAAACACTGTTTCTCAGTT +
Preference number: 4 (lower is better)
Translates to: FRGPLIKSGPGQQRRATLSILLQ*KHCFSV
Trigger: AACTGAGAAACAGTGTTTGCATTGCAACAGTATTGA...CAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAAAGGACCCCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR GCA 90 bp TTCAGGGGTCCTTTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGGTTTGTCAATACTGTTaGAATGCAAACACTGTTTCT +
Preference number: 4 (lower is better)
Translates to: FRGPLIKSGPGQQRRATLVCQYC*NANTVS
Trigger: AGAAACAGTGTTTGCATTGCAACAGTATTGACAAAC...CAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAAAGGACCCCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR CCA 90 bp GTTGTTGCAGCAGCAGTAGCAGGAGAAAGGGCTAAGTTCTATATGTGTGAGAGAACGTCTTGGATCTTTTaGAGTCTTTACTTGAACAAT +
Preference number: 4 (lower is better)
Translates to: VVAAAVAGERAKFYMCERTSWIF*SLYLNN
Trigger: ATTGTTCAAGTAAAGACTCCAAAAGATCCAAGACGT...TCTCTCACACATATAGAACTTAGCCCTTTCTCCTGCTACTGCTGCTGCAACAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214755.2
3UTR CAA 72 bp AAACCTAACCTGGAGAGATATAAAAAGCATACATGCTaGCATAGTGCATTAATCTTAAAGAAGCCCAACATT +
Preference number: 4 (lower is better)
Translates to: KPNLERYKKHTC*HSALILKKPNI
Trigger: AATGTTGGGCTTCTTTAAGATTAATGCACTATGCAAGCATGTATGCTTTTTATATCTCTCCAGGTTAGGTTT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000170846.8
ENSMUST00000215370.2
CDS CCA 90 bp GCGACACTGGGCCAGCTTGTCGCTGCATTCATGTCTGGCCGTTCCTaGGAAGCGAGACTGCGCTGGAGGGCAGTGGAAACTCTCTGCACG +
Preference number: 5 (lower is better)
Translates to: ATLGQLVAAFMSGRS*EARLRWRAVETLCT
Trigger: CGTGCAGAGAGTTTCCACTGCCCTCCAGCGCAGTCTCGCTTCCCAGGAACGGCCAGACATGAATGCAGCGACAAGCTGGCCCAGTGTCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS CCA 90 bp GTCTGGCTTGGCGACACTGGGCCAGCTTGTCGCTGCATTCATGTCTaGCCGTTCCTGGGAAGCGAGACTGCGCTGGAGGGCAGTGGAAAC +
Preference number: 5 (lower is better)
Translates to: VWLGDTGPACRCIHV*PFLGSETALEGSGN
Trigger: GTTTCCACTGCCCTCCAGCGCAGTCTCGCTTCCCAGGAACGGCCAGACATGAATGCAGCGACAAGCTGGCCCAGTGTCGCCAAGCCAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR CAA 90 bp GTAGCTCAGCGCTTGCCAGGAGGATGGGAGCAGCTTTGTCGGACCCCCTGGGGAAGTAAGCCAGCAGCCTaGTTCAGCAGCTCCTGCCTG +
Preference number: 5 (lower is better)
Translates to: VAQRLPGGWEQLCRTPWGSKPAA*FSSSCL
Trigger: CAGGCAGGAGCTGCTGAACAAGGCTGCTGGCTTACT...TCCCCAGGGGGTCCGACAAAGCTGCTCCCATCCTCCTGGCAAGCGCTGAGCTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000170846.8
ENSMUST00000215370.2
CDS-3UTR CAA 90 bp CTCAGCGCTTGCCAGGAGGATGGGAGCAGCTTTGTCGGACCCCCTGGGGACAGAAGTAAGCCAGCAGCCTaGTTCAGCAGCTCCTGCCTG +
Preference number: 5 (lower is better)
Translates to: LSACQEDGSSFVGPPGDRSKPAA*FSSSCL
Trigger: CAGGCAGGAGCTGCTGAACAAGGCTGCTGGCTTACT...TCTGTCCCCAGGGGGTCCGACAAAGCTGCTCCCATCCTCCTGGCAAGCGCTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000170846.8
ENSMUST00000215370.2
CDS-3UTR CAA 90 bp AGCTCAGCGCTTGCCAGGAGGATGGGAGCAGCTTTGTCGGACCCCCTGGGGACATTTGAGGAACTGGACTaGAGAGGAGAGGCAGCCCCG +
Preference number: 5 (lower is better)
Translates to: SSALARRMGAALSDPLGTFEELD*RGEAAP
Trigger: CGGGGCTGCCTCTCCTCTCAAGTCCAGTTCCTCAAA...TGTCCCCAGGGGGTCCGACAAAGCTGCTCCCATCCTCCTGGCAAGCGCTGAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000170846.8
ENSMUST00000215370.2
CDS GCA 90 bp CGGGTGCCATGGTCCATGTGTGCTTGCTGCATAGGCTCTGTGAGCTaGTGGGACAACGGTACTCCACCTCACCAGGGCCATGGTGCTGAC +
Preference number: 5 (lower is better)
Translates to: RVPWSMCACCIGSVS*WDNGTPPHQGHGAD
Trigger: GTCAGCACCATGGCCCTGGTGAGGTGGAGTACCGTTGTCCCAGCAGCTCACAGAGCCTATGCAGCAAGCACACATGGACCATGGCACCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS GCA 90 bp CCACTTCTGACGTGCAGGGCACTCACGGGTGCCATGGTCCATGTGTaGTTGCTGCATAGGCTCTGTGAGCTGCTGGGACAACGGTACTCC +
Preference number: 5 (lower is better)
Translates to: PLLTCRALTGAMVHV*LLHRLCELLGQRYS
Trigger: GGAGTACCGTTGTCCCAGCAGCTCACAGAGCCTATGCAGCAAGCACACATGGACCATGGCACCCGTGAGTGCCCTGCACGTCAGAAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS CCA 90 bp GTGCCATGGTCCATGTGTGCTTGCTGCATAGGCTCTGTGAGCTGCTaGGACAACGGTACTCCACCTCACCAGGGCCATGGTGCTGACAGG +
Preference number: 5 (lower is better)
Translates to: VPWSMCACCIGSVSC*DNGTPPHQGHGADR
Trigger: CCTGTCAGCACCATGGCCCTGGTGAGGTGGAGTACCGTTGTCCCAGCAGCTCACAGAGCCTATGCAGCAAGCACACATGGACCATGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS CCA 90 bp GACACTGGCTTGAGGTGCCCCCTGGTCAGACTTGCTGCCTGTGCCTaGGCAGAGCCTGACATTTCTAATGGCTGCAGTGTACTCGGGAGG +
Preference number: 5 (lower is better)
Translates to: DTGLRCPLVRLAACA*AEPDISNGCSVLGR
Trigger: CCTCCCGAGTACACTGCAGCCATTAGAAATGTCAGGCTCTGCCCAGGCACAGGCAGCAAGTCTGACCAGGGGGCACCTCAAGCCAGTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR CAA 90 bp ATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCCGCTGGCTCTCGTTCGATTTGAGGAACTGGACTaGAGAGGAGAGGCAGCCCCG +
Preference number: 5 (lower is better)
Translates to: IWSRTTEEGHSAPLALVRFEELD*RGEAAP
Trigger: CGGGGCTGCCTCTCCTCTCAAGTCCAGTTCCTCAAA...TCGAACGAGAGCCAGCGGAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR CAA 90 bp TCAGCGCTTGCCAGGAGGATGGGAGCAGCTTTGTCGGACCCCCTGGGGACAGACCATGGCCGAGAGCTTTaGGAGGATAGGCTTCTCAGA +
Preference number: 5 (lower is better)
Translates to: SALARRMGAALSDPLGTDHGREL*EDRLLR
Trigger: TCTGAGAAGCCTATCCTCCAAAAGCTCTCGGCCATG...GTCTGTCCCCAGGGGGTCCGACAAAGCTGCTCCCATCCTCCTGGCAAGCGCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000170846.8
ENSMUST00000215370.2
CDS GCA 90 bp CGTTCCTGGGAAGCGAGACTGCGCTGGAGGGCAGTGGAAACTCTCTaGACGGCCTTTCACAGAGCACTCCGGGGTTCGTCCTTCAGTTAT +
Preference number: 5 (lower is better)
Translates to: RSWEARLRWRAVETL*TAFHRALRGSSFSY
Trigger: ATAACTGAAGGACGAACCCCGGAGTGCTCTGTGAAAGGCCGTGCAGAGAGTTTCCACTGCCCTCCAGCGCAGTCTCGCTTCCCAGGAACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS GCA 90 bp AGCTTGTCGCTGCATTCATGTCTGGCCGTTCCTGGGAAGCGAGACTaGGCTGGAGGGCAGTGGAAACTCTCTGCACGGCCTTTCACAGAG +
Preference number: 5 (lower is better)
Translates to: SLSLHSCLAVPGKRD*AGGQWKLSARPFTE
Trigger: CTCTGTGAAAGGCCGTGCAGAGAGTTTCCACTGCCCTCCAGCGCAGTCTCGCTTCCCAGGAACGGCCAGACATGAATGCAGCGACAAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS CCA 90 bp TGTTCTAGGTGCTGTGCAATCCTGGCTATGACGTCCTGCCGCTCCTaGAGTAAAGAGCCAATCAGTGGGTTCGCCTCCCCAGCAGGCTGG +
Preference number: 5 (lower is better)
Translates to: CSRCCAILAMTSCRS*SKEPISGFASPAGW
Trigger: CCAGCCTGCTGGGGAGGCGAACCCACTGATTGGCTCTTTACTCCAGGAGCGGCAGGACGTCATAGCCAGGATTGCACAGCACCTAGAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR CAA 90 bp AGCTCAGCGCTTGCCAGGAGGATGGGAGCAGCTTTGTCGGACCCCCTGGGGACACCCAAGCTGCTTTCTTaGCAGAGAGCTGTGTTAGAG +
Preference number: 5 (lower is better)
Translates to: SSALARRMGAALSDPLGTPKLLS*QRAVLE
Trigger: CTCTAACACAGCTCTCTGCAAAGAAAGCAGCTTGGG...TGTCCCCAGGGGGTCCGACAAAGCTGCTCCCATCCTCCTGGCAAGCGCTGAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000170846.8
ENSMUST00000215370.2
CDS-3UTR CAA 90 bp CAGCGCTTGCCAGGAGGATGGGAGCAGCTTTGTCGGACCCCCTGGGGACAGACCGATGAAAGGCTCTGGTaGATGTCCCATCCAAGGAAT +
Preference number: 5 (lower is better)
Translates to: QRLPGGWEQLCRTPWGQTDERLW*MSHPRN
Trigger: ATTCCTTGGATGGGACATCAACCAGAGCCTTTCATC...GGTCTGTCCCCAGGGGGTCCGACAAAGCTGCTCCCATCCTCCTGGCAAGCGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000170846.8
ENSMUST00000215370.2
CDS-3UTR CAA 90 bp AGCTCAGCGCTTGCCAGGAGGATGGGAGCAGCTTTGTCGGACCCCCTGGGGACAGTGAAAACTGAGGGTTaGTTGGCGACTCAGTGTAGG +
Preference number: 5 (lower is better)
Translates to: SSALARRMGAALSDPLGTVKTEG*LATQCR
Trigger: CCTACACTGAGTCGCCAACAAACCCTCAGTTTTCAC...TGTCCCCAGGGGGTCCGACAAAGCTGCTCCCATCCTCCTGGCAAGCGCTGAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000170846.8
ENSMUST00000215370.2
CDS-3UTR CAA 90 bp GTAGCTCAGCGCTTGCCAGGAGGATGGGAGCAGCTTTGTCGGACCCCCTGGGGAGTGAAAACTGAGGGTTaGTTGGCGACTCAGTGTAGG +
Preference number: 5 (lower is better)
Translates to: VAQRLPGGWEQLCRTPWGVKTEG*LATQCR
Trigger: CCTACACTGAGTCGCCAACAAACCCTCAGTTTTCAC...TCCCCAGGGGGTCCGACAAAGCTGCTCCCATCCTCCTGGCAAGCGCTGAGCTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000170846.8
ENSMUST00000215370.2
CDS GCA 90 bp AGACTTGCTGCCTGTGCCTGGGCAGAGCCTGACATTTCTAATGGCTaGAGTGTACTCGGGAGGCATGCCACTTCTGACGTGCAGGGCACT +
Preference number: 5 (lower is better)
Translates to: RLAACAWAEPDISNG*SVLGRHATSDVQGT
Trigger: AGTGCCCTGCACGTCAGAAGTGGCATGCCTCCCGAGTACACTGCAGCCATTAGAAATGTCAGGCTCTGCCCAGGCACAGGCAGCAAGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS GCA 90 bp GGGTCGATGTGTTCTAGGTGCTGTGCAATCCTGGCTATGACGTCCTaGCGCTCCTGGAGTAAAGAGCCAATCAGTGGGTTCGCCTCCCCA +
Preference number: 5 (lower is better)
Translates to: GSMCSRCCAILAMTS*RSWSKEPISGFASP
Trigger: TGGGGAGGCGAACCCACTGATTGGCTCTTTACTCCAGGAGCGGCAGGACGTCATAGCCAGGATTGCACAGCACCTAGAACACATCGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR CAA 90 bp TCAGCGCTTGCCAGGAGGATGGGAGCAGCTTTGTCGGACCCCCTGGGGACAGACGATGAAAGGCTCTGGTaGATGTCCCATCCAAGGAAT +
Preference number: 5 (lower is better)
Translates to: SALARRMGAALSDPLGTDDERLW*MSHPRN
Trigger: ATTCCTTGGATGGGACATCAACCAGAGCCTTTCATC...GTCTGTCCCCAGGGGGTCCGACAAAGCTGCTCCCATCCTCCTGGCAAGCGCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000170846.8
ENSMUST00000215370.2
CDS TCA 90 bp ATCAGTGGGTTCGCCTCCCCAGCAGGCTGGCGAGGGTACAGACTGTaGGAAGTGCAAGTTTCTCCTGGCCTGGTTTCTGACTTCTCTCTG +
Preference number: 5 (lower is better)
Translates to: ISGFASPAGWRGYRL*EVQVSPGLVSDFSL
Trigger: CAGAGAGAAGTCAGAAACCAGGCCAGGAGAAACTTGCACTTCTCACAGTCTGTACCCTCGCCAGCCTGCTGGGGAGGCGAACCCACTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS CCA 90 bp GGAAACACTGTAGAACGACACTTCCACTGGCAGAGTCAAGTGCGTTaGGCAGAAAGTCCCACTGGCTCCCACCTCGGCCGTAAAGCCATC +
Preference number: 5 (lower is better)
Translates to: GNTVERHFHWQSQVR*AESPTGSHLGRKAI
Trigger: GATGGCTTTACGGCCGAGGTGGGAGCCAGTGGGACTTTCTGCCCAACGCACTTGACTCTGCCAGTGGAAGTGTCGTTCTACAGTGTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR CAA 90 bp TCAGCGCTTGCCAGGAGGATGGGAGCAGCTTTGTCGGACCCCCTGGGGACAGACAAAACTGAGGGTTTGTaGGCGACTCAGTGTAGGATT +
Preference number: 5 (lower is better)
Translates to: SALARRMGAALSDPLGTDKTEGL*ATQCRI
Trigger: AATCCTACACTGAGTCGCCAACAAACCCTCAGTTTT...GTCTGTCCCCAGGGGGTCCGACAAAGCTGCTCCCATCCTCCTGGCAAGCGCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000170846.8
ENSMUST00000215370.2
CDS-3UTR CAA 90 bp GTAGCTCAGCGCTTGCCAGGAGGATGGGAGCAGCTTTGTCGGACCCCCTGGGGAAAAACTGAGGGTTTGTaGGCGACTCAGTGTAGGATT +
Preference number: 5 (lower is better)
Translates to: VAQRLPGGWEQLCRTPWGKTEGL*ATQCRI
Trigger: AATCCTACACTGAGTCGCCAACAAACCCTCAGTTTT...TCCCCAGGGGGTCCGACAAAGCTGCTCCCATCCTCCTGGCAAGCGCTGAGCTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000170846.8
ENSMUST00000215370.2
CDS-3UTR CAA 90 bp ATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCCGCTGGCTCTCGTTCGAGTGAAAACTGAGGGTTaGTTGGCGACTCAGTGTAGG +
Preference number: 5 (lower is better)
Translates to: IWSRTTEEGHSAPLALVRVKTEG*LATQCR
Trigger: CCTACACTGAGTCGCCAACAAACCCTCAGTTTTCAC...TCGAACGAGAGCCAGCGGAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000215370.2
CDS TCA 90 bp AGCTCTGACAGCTGGAGACACTGGAATCGACCACAGGCAGTGATTTaGACGTTCTCACTGACGCCTCCTGTGACCTCACTTCTCCCCCAG +
Preference number: 5 (lower is better)
Translates to: SSDSWRHWNRPQAVI*TFSLTPPVTSLLPQ
Trigger: CTGGGGGAGAAGTGAGGTCACAGGAGGCGTCAGTGAGAACGTTCAAATCACTGCCTGTGGTCGATTCCAGTGTCTCCAGCTGTCAGAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS TCA 90 bp GCGCTGTGCAGCCTCTCGCCTGCAGACAAACAGTGCTTTACGCTGTaGGGTTTTCCAGCACCTGAGTCCCTTTTTGCCTCCTGCTCAGTT +
Preference number: 5 (lower is better)
Translates to: ALCSLSPADKQCFTL*GFPAPESLFASCSV
Trigger: AACTGAGCAGGAGGCAAAAAGGGACTCAGGTGCTGGAAAACCTCACAGCGTAAAGCACTGTTTGTCTGCAGGCGAGAGGCTGCACAGCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS GCA 90 bp CGGGGAACTGGCTCCAAGATCCACCTCTCCAGTAACAGTGCGTCTTaGTTAATGGCGGGATCATTCAGATCTGCCCCCTCTGTACTAGGC +
Preference number: 5 (lower is better)
Translates to: RGTGSKIHLSSNSAS*LMAGSFRSAPSVLG
Trigger: GCCTAGTACAGAGGGGGCAGATCTGAATGATCCCGCCATTAAGCAAGACGCACTGTTACTGGAGAGGTGGATCTTGGAGCCAGTTCCCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR CAA 90 bp TTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCCGCTGGCTCCGACACTGGGCCAGCTaGTCGCTGCATTCATGTCTG +
Preference number: 5 (lower is better)
Translates to: LIKSGPGQQRRATLLRWLRHWAS*SLHSCL
Trigger: CAGACATGAATGCAGCGACAAGCTGGCCCAGTGTCG...GAGCCAGCGGAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR CAA 90 bp GTAGCTCAGCGCTTGCCAGGAGGATGGGAGCAGCTTTGTCGGACCCCCTGGGGATTAGAAGGAATGGAATaGGAGTCGTGCTTGCTGAAT +
Preference number: 5 (lower is better)
Translates to: VAQRLPGGWEQLCRTPWGLEGME*ESCLLN
Trigger: ATTCAGCAAGCACGACTCCAATTCCATTCCTTCTAA...TCCCCAGGGGGTCCGACAAAGCTGCTCCCATCCTCCTGGCAAGCGCTGAGCTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000170846.8
ENSMUST00000215370.2
CDS CCA 90 bp CGAGGGAGCATTATCATCGGAAACACTGTAGAACGACACTTCCACTaGCAGAGTCAAGTGCGTTGGGCAGAAAGTCCCACTGGCTCCCAC +
Preference number: 5 (lower is better)
Translates to: RGSIIIGNTVERHFH*QSQVRWAESPTGSH
Trigger: GTGGGAGCCAGTGGGACTTTCTGCCCAACGCACTTGACTCTGCCAGTGGAAGTGTCGTTCTACAGTGTTTCCGATGATAATGCTCCCTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR CAA 90 bp AGGGGTCCTTTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCCGACACTGGGCCAGCTaGTCGCTGCATTCATGTCTG +
Preference number: 5 (lower is better)
Translates to: RGPLIKSGPGQQRRATLLRHWAS*SLHSCL
Trigger: CAGACATGAATGCAGCGACAAGCTGGCCCAGTGTCG...GAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAAAGGACCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR CAA 90 bp TCAGCGCTTGCCAGGAGGATGGGAGCAGCTTTGTCGGACCCCCTGGGGACAGACTCTAAGCTCCTGTTCTaGAATTCTCTTCTCATACAG +
Preference number: 5 (lower is better)
Translates to: SALARRMGAALSDPLGTDSKLLF*NSLLIQ
Trigger: CTGTATGAGAAGAGAATTCAAGAACAGGAGCTTAGA...GTCTGTCCCCAGGGGGTCCGACAAAGCTGCTCCCATCCTCCTGGCAAGCGCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000170846.8
ENSMUST00000215370.2
CDS-3UTR CAA 90 bp TGGTTTCAACAGTACAAAAAGGGCGACGACACGGGTGCTTCCAGTCCACTTAGGAGTAAGCCAGCAGCCTaGTTCAGCAGCTCCTGCCTG +
Preference number: 5 (lower is better)
Translates to: WFQQYKKGDDTGASSPLRSKPAA*FSSSCL
Trigger: CAGGCAGGAGCTGCTGAACAAGGCTGCTGGCTTACT...CCTAAGTGGACTGGAAGCACCCGTGTCGTCGCCCTTTTTGTACTGTTGAAACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR CAA 90 bp GTAGCTCAGCGCTTGCCAGGAGGATGGGAGCAGCTTTGTCGGACCCCCTGGGGACACGTCTTGGATCTTTaGGAGTCTTTACTTGAACAA +
Preference number: 5 (lower is better)
Translates to: VAQRLPGGWEQLCRTPWGHVLDL*ESLLEQ
Trigger: TTGTTCAAGTAAAGACTCCAAAAGATCCAAGACGTG...TCCCCAGGGGGTCCGACAAAGCTGCTCCCATCCTCCTGGCAAGCGCTGAGCTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000170846.8
ENSMUST00000215370.2
CDS-3UTR CAA 90 bp CAGCGCTTGCCAGGAGGATGGGAGCAGCTTTGTCGGACCCCCTGGGGACAGACCACAGTCTTATTGGGATaGAATAAGGTCACTTGTATC +
Preference number: 5 (lower is better)
Translates to: QRLPGGWEQLCRTPWGQTTVLLG*NKVTCI
Trigger: GATACAAGTGACCTTATTCAATCCCAATAAGACTGT...GGTCTGTCCCCAGGGGGTCCGACAAAGCTGCTCCCATCCTCCTGGCAAGCGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000170846.8
ENSMUST00000215370.2
CDS TCA 90 bp GTAAGCCAGCAGCCTTGTTCAGCAGCTCCTGCCTGGCTGTGGGGGTaGTGCTATCAGGATGGTTCTGATGCTGAGTTCTTACTTCAGGTT +
Preference number: 5 (lower is better)
Translates to: VSQQPCSAAPAWLWG*CYQDGSDAEFLLQV
Trigger: AACCTGAAGTAAGAACTCAGCATCAGAACCATCCTGATAGCATCACCCCCACAGCCAGGCAGGAGCTGCTGAACAAGGCTGCTGGCTTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR CAA 90 bp AGCTCAGCGCTTGCCAGGAGGATGGGAGCAGCTTTGTCGGACCCCCTGGGGACAACAGTCTTATTGGGATaGAATAAGGTCACTTGTATC +
Preference number: 5 (lower is better)
Translates to: SSALARRMGAALSDPLGTTVLLG*NKVTCI
Trigger: GATACAAGTGACCTTATTCAATCCCAATAAGACTGT...TGTCCCCAGGGGGTCCGACAAAGCTGCTCCCATCCTCCTGGCAAGCGCTGAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000170846.8
ENSMUST00000215370.2
CDS-3UTR CAA 90 bp TTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCCGCTGGCTCCCCAAGCTGCTTTCTTaGCAGAGAGCTGTGTTAGAG +
Preference number: 5 (lower is better)
Translates to: LIKSGPGQQRRATLLRWLPKLLS*QRAVLE
Trigger: CTCTAACACAGCTCTCTGCAAAGAAAGCAGCTTGGG...GAGCCAGCGGAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR CAA 90 bp TGGTTTCAACAGTACAAAAAGGGCGACGACACGGGTGCTTCCAGTCCACTTAGGCATGGCCGAGAGCTTTaGGAGGATAGGCTTCTCAGA +
Preference number: 5 (lower is better)
Translates to: WFQQYKKGDDTGASSPLRHGREL*EDRLLR
Trigger: TCTGAGAAGCCTATCCTCCAAAAGCTCTCGGCCATG...CCTAAGTGGACTGGAAGCACCCGTGTCGTCGCCCTTTTTGTACTGTTGAAACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR CAA 90 bp AGGGGTCCTTTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCCATGGCCGAGAGCTTTaGGAGGATAGGCTTCTCAGA +
Preference number: 5 (lower is better)
Translates to: RGPLIKSGPGQQRRATLLHGREL*EDRLLR
Trigger: TCTGAGAAGCCTATCCTCCAAAAGCTCTCGGCCATG...GAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAAAGGACCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS TCA 90 bp GTGAGAGACATTGGGGACGGGAAACACATGCTCAGTTGGAGTCTGTaGAAAACTCCACTGCAGGTCGACATCCGCAGCACTGATTCTGTA +
Preference number: 5 (lower is better)
Translates to: VRDIGDGKHMLSWSL*KTPLQVDIRSTDSV
Trigger: TACAGAATCAGTGCTGCGGATGTCGACCTGCAGTGGAGTTTTTCACAGACTCCAACTGAGCATGTGTTTCCCGTCCCCAATGTCTCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR CAA 90 bp CAGGAGCCGGACATCTCTATGGAGGTAGATCTTTCCAGATTTAGAACTCTGGAAAGTAAGCCAGCAGCCTaGTTCAGCAGCTCCTGCCTG +
Preference number: 5 (lower is better)
Translates to: QEPDISMEVDLSRFRTLESKPAA*FSSSCL
Trigger: CAGGCAGGAGCTGCTGAACAAGGCTGCTGGCTTACT...TTCCAGAGTTCTAAATCTGGAAAGATCTACCTCCATAGAGATGTCCGGCTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214755.2
CDS-3UTR CAA 90 bp TGGCGACTCAGTGTAGGATTTGAGTTCATACGCAGCACCGCTATCGACCTCCATCCCAAGCTGCTTTCTTaGCAGAGAGCTGTGTTAGAG +
Preference number: 5 (lower is better)
Translates to: WRLSVGFEFIRSTAIDLHPKLLS*QRAVLE
Trigger: CTCTAACACAGCTCTCTGCAAAGAAAGCAGCTTGGG...ATGGAGGTCGATAGCGGTGCTGCGTATGAACTCAAATCCTACACTGAGTCGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214755.2
CDS GCA 90 bp ATATTCAGGCATGGCCGAGAGCTTTTGGAGGATAGGCTTCTCAGATaGAGCAGCGACGCGTCTAGATCAAAGCAGCCTGACTGTGTTTTT +
Preference number: 5 (lower is better)
Translates to: IFRHGRELLEDRLLR*SSDASRSKQPDCVF
Trigger: AAAAACACAGTCAGGCTGCTTTGATCTAGACGCGTCGCTGCTGCATCTGAGAAGCCTATCCTCCAAAAGCTCTCGGCCATGCCTGAATAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR CAA 90 bp TTTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCCGCTGGCTGATGAAAGGCTCTGGTaGATGTCCCATCCAAGGAAT +
Preference number: 5 (lower is better)
Translates to: FNKIWSRTTEEGHSAPLADERLW*MSHPRN
Trigger: ATTCCTTGGATGGGACATCAACCAGAGCCTTTCATC...AGCCAGCGGAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR CAA 90 bp AGGGGTCCTTTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCGATGAAAGGCTCTGGTaGATGTCCCATCCAAGGAAT +
Preference number: 5 (lower is better)
Translates to: RGPLIKSGPGQQRRATLLDERLW*MSHPRN
Trigger: ATTCCTTGGATGGGACATCAACCAGAGCCTTTCATC...GAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAAAGGACCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR CAA 90 bp GCATACCTCGTAGGTCATACACGACTACAAACATCTTCACCACAGTCTTATTGGTTTGAGGAACTGGACTaGAGAGGAGAGGCAGCCCCG +
Preference number: 5 (lower is better)
Translates to: AYLVGHTRLQTSSPQSYWFEELD*RGEAAP
Trigger: CGGGGCTGCCTCTCCTCTCAAGTCCAGTTCCTCAAA...CCAATAAGACTGTGGTGAAGATGTTTGTAGTCGTGTATGACCTACGAGGTATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214755.2
CDS TCA 90 bp AGGTCAAAACCGGATAATGAGCTTGTCTGGGTAAGGACTGAACGCTaGCTTTCAAGGCCACATTGTGAGAGACATTGGGGACGGGAAACA +
Preference number: 5 (lower is better)
Translates to: RSKPDNELVWVRTER*LSRPHCERHWGRET
Trigger: TGTTTCCCGTCCCCAATGTCTCTCACAATGTGGCCTTGAAAGTCAGCGTTCAGTCCTTACCCAGACAAGCTCATTATCCGGTTTTGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR CAA 90 bp TTTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCCGCTGGCTGAAACACATGCTCAGTaGGAGTCTGTGAAAAACTCC +
Preference number: 5 (lower is better)
Translates to: FNKIWSRTTEEGHSAPLAETHAQ*ESVKNS
Trigger: GGAGTTTTTCACAGACTCCAACTGAGCATGTGTTTC...AGCCAGCGGAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR CAA 90 bp TGGTTTCAACAGTACAAAAAGGGCGACGACACGGGTGCTTCCAGTCCACTTAGGAAAACTGAGGGTTTGTaGGCGACTCAGTGTAGGATT +
Preference number: 5 (lower is better)
Translates to: WFQQYKKGDDTGASSPLRKTEGL*ATQCRI
Trigger: AATCCTACACTGAGTCGCCAACAAACCCTCAGTTTT...CCTAAGTGGACTGGAAGCACCCGTGTCGTCGCCCTTTTTGTACTGTTGAAACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000215370.2
CDS-3UTR CAA 90 bp CGTGTGCTGGACGTTCTCTTTGTTAATACTTCTCTTCATCTCTTGTTTAACAGGCGACACTGGGCCAGCTaGTCGCTGCATTCATGTCTG +
Preference number: 5 (lower is better)
Translates to: RVLDVLFVNTSLHLLFNRRHWAS*SLHSCL
Trigger: CAGACATGAATGCAGCGACAAGCTGGCCCAGTGTCG...CCTGTTAAACAAGAGATGAAGAGAAGTATTAACAAAGAGAACGTCCAGCACACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214755.2
CDS-3UTR CAA 90 bp TTCAGGGGTCCTTTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGGAAACACATGCTCAGTaGGAGTCTGTGAAAAACTCC +
Preference number: 5 (lower is better)
Translates to: FRGPLIKSGPGQQRRATLETHAQ*ESVKNS
Trigger: GGAGTTTTTCACAGACTCCAACTGAGCATGTGTTTC...CAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAAAGGACCCCTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR CAA 90 bp TTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCCGCTGGCTCTCTAAGCTCCTGTTCTaGAATTCTCTTCTCATACAG +
Preference number: 5 (lower is better)
Translates to: LIKSGPGQQRRATLLRWLSKLLF*NSLLIQ
Trigger: CTGTATGAGAAGAGAATTCAAGAACAGGAGCTTAGA...GAGCCAGCGGAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR CAA 90 bp TGGTTTCAACAGTACAAAAAGGGCGACGACACGGGTGCTTCCAGTCCACTTAGGTTAGAAGGAATGGAATaGGAGTCGTGCTTGCTGAAT +
Preference number: 5 (lower is better)
Translates to: WFQQYKKGDDTGASSPLRLEGME*ESCLLN
Trigger: ATTCAGCAAGCACGACTCCAATTCCATTCCTTCTAA...CCTAAGTGGACTGGAAGCACCCGTGTCGTCGCCCTTTTTGTACTGTTGAAACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR CAA 90 bp TTTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCCGCTGGCTTTAGAAGGAATGGAATaGGAGTCGTGCTTGCTGAAT +
Preference number: 5 (lower is better)
Translates to: FNKIWSRTTEEGHSAPLALEGME*ESCLLN
Trigger: ATTCAGCAAGCACGACTCCAATTCCATTCCTTCTAA...AGCCAGCGGAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR CAA 90 bp GCATACCTCGTAGGTCATACACGACTACAAACATCTTCACCACAGTCTTATTGGCATGGCCGAGAGCTTTaGGAGGATAGGCTTCTCAGA +
Preference number: 5 (lower is better)
Translates to: AYLVGHTRLQTSSPQSYWHGREL*EDRLLR
Trigger: TCTGAGAAGCCTATCCTCCAAAAGCTCTCGGCCATG...CCAATAAGACTGTGGTGAAGATGTTTGTAGTCGTGTATGACCTACGAGGTATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214755.2
CDS-3UTR CAA 90 bp TTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCCGCTGGCTCTTCACCACAGTCTTATaGGGATTGAATAAGGTCACT +
Preference number: 5 (lower is better)
Translates to: LIKSGPGQQRRATLLRWLFTTVL*GLNKVT
Trigger: AGTGACCTTATTCAATCCCAATAAGACTGTGGTGAA...GAGCCAGCGGAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000215370.2
CDS-3UTR CAA 90 bp TTTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCCGCTGGCTTCTAAGCTCCTGTTCTaGAATTCTCTTCTCATACAG +
Preference number: 5 (lower is better)
Translates to: FNKIWSRTTEEGHSAPLASKLLF*NSLLIQ
Trigger: CTGTATGAGAAGAGAATTCAAGAACAGGAGCTTAGA...AGCCAGCGGAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR CAA 90 bp TTCAGGGGTCCTTTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGTTAGAAGGAATGGAATaGGAGTCGTGCTTGCTGAAT +
Preference number: 5 (lower is better)
Translates to: FRGPLIKSGPGQQRRATLLEGME*ESCLLN
Trigger: ATTCAGCAAGCACGACTCCAATTCCATTCCTTCTAA...CAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAAAGGACCCCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR CAA 90 bp TTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCCGCTGGCTCTCTCCGTACATGTATTaGTGCAAATCTGTTTGTCAA +
Preference number: 5 (lower is better)
Translates to: LIKSGPGQQRRATLLRWLSPYMY*CKSVCQ
Trigger: TTGACAAACAGATTTGCACAAATACATGTACGGAGA...GAGCCAGCGGAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR CAA 90 bp TTTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGCTCCGCTGGCTCACGTCTTGGATCTTTaGGAGTCTTTACTTGAACAA +
Preference number: 5 (lower is better)
Translates to: FNKIWSRTTEEGHSAPLAHVLDL*ESLLEQ
Trigger: TTGTTCAAGTAAAGACTCCAAAAGATCCAAGACGTG...AGCCAGCGGAGCAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR CAA 90 bp TGGTTTCAACAGTACAAAAAGGGCGACGACACGGGTGCTTCCAGTCCACTTAGGCACGTCTTGGATCTTTaGGAGTCTTTACTTGAACAA +
Preference number: 5 (lower is better)
Translates to: WFQQYKKGDDTGASSPLRHVLDL*ESLLEQ
Trigger: TTGTTCAAGTAAAGACTCCAAAAGATCCAAGACGTG...CCTAAGTGGACTGGAAGCACCCGTGTCGTCGCCCTTTTTGTACTGTTGAAACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR CAA 90 bp TGGTTTCAACAGTACAAAAAGGGCGACGACACGGGTGCTTCCAGTCCACTTAGGTTCACCACAGTCTTATaGGGATTGAATAAGGTCACT +
Preference number: 5 (lower is better)
Translates to: WFQQYKKGDDTGASSPLRFTTVL*GLNKVT
Trigger: AGTGACCTTATTCAATCCCAATAAGACTGTGGTGAA...CCTAAGTGGACTGGAAGCACCCGTGTCGTCGCCCTTTTTGTACTGTTGAAACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000215370.2
CDS-3UTR CAA 90 bp CTCAGTGTAGGATTTGAGTTCATACGCAGCACCGCTATCGACCTCCATGGACTTCACGTCTTGGATCTTTaGGAGTCTTTACTTGAACAA +
Preference number: 5 (lower is better)
Translates to: LSVGFEFIRSTAIDLHGLHVLDL*ESLLEQ
Trigger: TTGTTCAAGTAAAGACTCCAAAAGATCCAAGACGTG...AAGTCCATGGAGGTCGATAGCGGTGCTGCGTATGAACTCAAATCCTACACTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214755.2
CDS-3UTR CAA 90 bp TGGTTTCAACAGTACAAAAAGGGCGACGACACGGGTGCTTCCAGTCCACTTAGGACAGTCTTATTGGGATaGAATAAGGTCACTTGTATC +
Preference number: 5 (lower is better)
Translates to: WFQQYKKGDDTGASSPLRTVLLG*NKVTCI
Trigger: GATACAAGTGACCTTATTCAATCCCAATAAGACTGT...CCTAAGTGGACTGGAAGCACCCGTGTCGTCGCCCTTTTTGTACTGTTGAAACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000215370.2
CDS-3UTR CAA 90 bp TTCAGGGGTCCTTTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGTTCACCACAGTCTTATaGGGATTGAATAAGGTCACT +
Preference number: 5 (lower is better)
Translates to: FRGPLIKSGPGQQRRATLFTTVL*GLNKVT
Trigger: AGTGACCTTATTCAATCCCAATAAGACTGTGGTGAA...CAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAAAGGACCCCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000215370.2
CDS-3UTR CAA 90 bp TTCAGGGGTCCTTTAATAAAATCTGGTCCAGGACAACAGAGGAGGGCCACTCTGTCTCCGTACATGTATTaGTGCAAATCTGTTTGTCAA +
Preference number: 5 (lower is better)
Translates to: FRGPLIKSGPGQQRRATLSPYMY*CKSVCQ
Trigger: TTGACAAACAGATTTGCACAAATACATGTACGGAGA...CAGAGTGGCCCTCCTCTGTTGTCCTGGACCAGATTTTATTAAAGGACCCCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS-3UTR CAA 90 bp CAGGAGCCGGACATCTCTATGGAGGTAGATCTTTCCAGATTTAGAACTCTGGAATCTAAGCTCCTGTTCTaGAATTCTCTTCTCATACAG +
Preference number: 5 (lower is better)
Translates to: QEPDISMEVDLSRFRTLESKLLF*NSLLIQ
Trigger: CTGTATGAGAAGAGAATTCAAGAACAGGAGCTTAGA...TTCCAGAGTTCTAAATCTGGAAAGATCTACCTCCATAGAGATGTCCGGCTCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214755.2
CDS-3UTR CAA 90 bp GTTGTTGCAGCAGCAGTAGCAGGAGAAAGGGCTAAGTTCTATATGTGTGAGAGATCTCCGTACATGTATTaGTGCAAATCTGTTTGTCAA +
Preference number: 5 (lower is better)
Translates to: VVAAAVAGERAKFYMCERSPYMY*CKSVCQ
Trigger: TTGACAAACAGATTTGCACAAATACATGTACGGAGA...TCTCTCACACATATAGAACTTAGCCCTTTCTCCTGCTACTGCTGCTGCAACAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214755.2
CDS TCA 90 bp AGAGACATTCTCTCTGCCCTTCTTCAACAAGGTTTTGTCATCAAATaGACTCCTGAACACTTTAGAAGGAATGGAATTGGAGTCGTGCTT +
Preference number: 5 (lower is better)
Translates to: RDILSALLQQGFVIK*TPEHFRRNGIGVVL
Trigger: AAGCACGACTCCAATTCCATTCCTTCTAAAGTGTTCAGGAGTTCATTTGATGACAAAACCTTGTTGAAGAAGGGCAGAGAGAATGTCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS GCA 90 bp TCATTCTCTTCACTGAGGTCATTTTCTGTGCCAACCCGAATGCTTTaGTCACACGTCTTGGATCTTTTGGAGTCTTTACTTGAACAATTA +
Preference number: 5 (lower is better)
Translates to: SFSSLRSFSVPTRML*SHVLDLLESLLEQL
Trigger: TAATTGTTCAAGTAAAGACTCCAAAAGATCCAAGACGTGTGAGCAAAGCATTCGGGTTGGCACAGAAAATGACCTCAGTGAAGAGAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS TCA 90 bp CCGAATGCTTTGCTCACACGTCTTGGATCTTTTGGAGTCTTTACTTaGACAATTAGTTTTGTTCTTGTTCAAACTGTCAGGCATTTCCAG +
Preference number: 5 (lower is better)
Translates to: PNALLTRLGSFGVFT*TISFVLVQTVRHFQ
Trigger: CTGGAAATGCCTGACAGTTTGAACAAGAACAAAACTAATTGTTCAAGTAAAGACTCCAAAAGATCCAAGACGTGTGAGCAAAGCATTCGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS GCA 90 bp TCCGTACATGTATTTGTGCAAATCTGTTTGTCAATACTGTTGCAATaGAAACACTGTTTCTCAGTTTCATGGCTCATTTCTTGCTCCTTA +
Preference number: 5 (lower is better)
Translates to: SVHVFVQICLSILLQ*KHCFSVSWLISCSL
Trigger: TAAGGAGCAAGAAATGAGCCATGAAACTGAGAAACAGTGTTTGCATTGCAACAGTATTGACAAACAGATTTGCACAAATACATGTACGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS GCA 90 bp CTGTTGCAATGCAAACACTGTTTCTCAGTTTCATGGCTCATTTCTTaGTCCTTAAGTTGTAATTTACAAGATGTACTTTCCAATCTGCTA +
Preference number: 5 (lower is better)
Translates to: LLQCKHCFSVSWLIS*SLSCNLQDVLSNLL
Trigger: TAGCAGATTGGAAAGTACATCTTGTAAATTACAACTTAAGGAGCAAGAAATGAGCCATGAAACTGAGAAACAGTGTTTGCATTGCAACAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS GCA 90 bp TTTTCTCCGTACATGTATTTGTGCAAATCTGTTTGTCAATACTGTTaGAATGCAAACACTGTTTCTCAGTTTCATGGCTCATTTCTTGCT +
Preference number: 5 (lower is better)
Translates to: FSPYMYLCKSVCQYC*NANTVSQFHGSFLA
Trigger: AGCAAGAAATGAGCCATGAAACTGAGAAACAGTGTTTGCATTGCAACAGTATTGACAAACAGATTTGCACAAATACATGTACGGAGAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS GCA 72 bp CCCAGTGCCACTGAAGCCCAGGACACTGGCTTGAGGTaGCCCCTGGTCAGACTTGCTGCCTGTGCCTGGGCA +
Preference number: 6 (lower is better)
Translates to: PSATEAQDTGLR*PLVRLAACAWA
Trigger: TGCCCAGGCACAGGCAGCAAGTCTGACCAGGGGGCACCTCAAGCCAGTGTCCTGGGCTTCAGTGGCACTGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS CCA 72 bp GGCGACACTGGGCCAGCTTGTCGCTGCATTCATGTCTaGCCGTTCCTGGGAAGCGAGACTGCGCTGGAGGGC +
Preference number: 6 (lower is better)
Translates to: GDTGPACRCIHV*PFLGSETALEG
Trigger: GCCCTCCAGCGCAGTCTCGCTTCCCAGGAACGGCCAGACATGAATGCAGCGACAAGCTGGCCCAGTGTCGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS TCA 72 bp ACGCCTCCTGTGACCTCACTTCTCCCCCAGTGCCACTaGAGCCCAGGACACTGGCTTGAGGTGCCCCCTGGT +
Preference number: 6 (lower is better)
Translates to: TPPVTSLLPQCH*SPGHWLEVPPG
Trigger: ACCAGGGGGCACCTCAAGCCAGTGTCCTGGGCTTCAGTGGCACTGGGGGAGAAGTGAGGTCACAGGAGGCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS GCA 72 bp GCTGCAGTGTACTCGGGAGGCATGCCACTTCTGACGTaGAGGGCACTCACGGGTGCCATGGTCCATGTGTGC +
Preference number: 6 (lower is better)
Translates to: AAVYSGGMPLLT*RALTGAMVHVC
Trigger: GCACACATGGACCATGGCACCCGTGAGTGCCCTGCACGTCAGAAGTGGCATGCCTCCCGAGTACACTGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS CCA 72 bp GGCCAGCTTGTCGCTGCATTCATGTCTGGCCGTTCCTaGGAAGCGAGACTGCGCTGGAGGGCAGTGGAAACT +
Preference number: 6 (lower is better)
Translates to: GQLVAAFMSGRS*EARLRWRAVET
Trigger: AGTTTCCACTGCCCTCCAGCGCAGTCTCGCTTCCCAGGAACGGCCAGACATGAATGCAGCGACAAGCTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS GCA 72 bp TTCGTCTGGCTTGGCGACACTGGGCCAGCTTGTCGCTaGATTCATGTCTGGCCGTTCCTGGGAAGCGAGACT +
Preference number: 6 (lower is better)
Translates to: FVWLGDTGPACR*IHVWPFLGSET
Trigger: AGTCTCGCTTCCCAGGAACGGCCAGACATGAATGCAGCGACAAGCTGGCCCAGTGTCGCCAAGCCAGACGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS GCA 72 bp GGGCACTCACGGGTGCCATGGTCCATGTGTGCTTGCTaGATAGGCTCTGTGAGCTGCTGGGACAACGGTACT +
Preference number: 6 (lower is better)
Translates to: GHSRVPWSMCAC*IGSVSCWDNGT
Trigger: AGTACCGTTGTCCCAGCAGCTCACAGAGCCTATGCAGCAAGCACACATGGACCATGGCACCCGTGAGTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS GCA 72 bp ACGTGCAGGGCACTCACGGGTGCCATGGTCCATGTGTaGTTGCTGCATAGGCTCTGTGAGCTGCTGGGACAA +
Preference number: 6 (lower is better)
Translates to: TCRALTGAMVHV*LLHRLCELLGQ
Trigger: TTGTCCCAGCAGCTCACAGAGCCTATGCAGCAAGCACACATGGACCATGGCACCCGTGAGTGCCCTGCACGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS CCA 72 bp TTCATGTCTGGCCGTTCCTGGGAAGCGAGACTGCGCTaGAGGGCAGTGGAAACTCTCTGCACGGCCTTTCAC +
Preference number: 6 (lower is better)
Translates to: FMSGRSWEARLR*RAVETLCTAFH
Trigger: GTGAAAGGCCGTGCAGAGAGTTTCCACTGCCCTCCAGCGCAGTCTCGCTTCCCAGGAACGGCCAGACATGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS TCA 72 bp TTCGCCTCCCCAGCAGGCTGGCGAGGGTACAGACTGTaGGAAGTGCAAGTTTCTCCTGGCCTGGTTTCTGAC +
Preference number: 6 (lower is better)
Translates to: FASPAGWRGYRL*EVQVSPGLVSD
Trigger: GTCAGAAACCAGGCCAGGAGAAACTTGCACTTCTCACAGTCTGTACCCTCGCCAGCCTGCTGGGGAGGCGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS GCA 72 bp TGGTCCATGTGTGCTTGCTGCATAGGCTCTGTGAGCTaGTGGGACAACGGTACTCCACCTCACCAGGGCCAT +
Preference number: 6 (lower is better)
Translates to: WSMCACCIGSVS*WDNGTPPHQGH
Trigger: ATGGCCCTGGTGAGGTGGAGTACCGTTGTCCCAGCAGCTCACAGAGCCTATGCAGCAAGCACACATGGACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS GCA 72 bp GCCTGTGCCTGGGCAGAGCCTGACATTTCTAATGGCTaGAGTGTACTCGGGAGGCATGCCACTTCTGACGTG +
Preference number: 6 (lower is better)
Translates to: ACAWAEPDISNG*SVLGRHATSDV
Trigger: CACGTCAGAAGTGGCATGCCTCCCGAGTACACTGCAGCCATTAGAAATGTCAGGCTCTGCCCAGGCACAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS CCA 72 bp TCCATGTGTGCTTGCTGCATAGGCTCTGTGAGCTGCTaGGACAACGGTACTCCACCTCACCAGGGCCATGGT +
Preference number: 6 (lower is better)
Translates to: SMCACCIGSVSC*DNGTPPHQGHG
Trigger: ACCATGGCCCTGGTGAGGTGGAGTACCGTTGTCCCAGCAGCTCACAGAGCCTATGCAGCAAGCACACATGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS CCA 72 bp TGCTGTGCAATCCTGGCTATGACGTCCTGCCGCTCCTaGAGTAAAGAGCCAATCAGTGGGTTCGCCTCCCCA +
Preference number: 6 (lower is better)
Translates to: CCAILAMTSCRS*SKEPISGFASP
Trigger: TGGGGAGGCGAACCCACTGATTGGCTCTTTACTCCAGGAGCGGCAGGACGTCATAGCCAGGATTGCACAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS TCA 72 bp AAAGGGTTAGGTTCCCCTACTGGCTGCCGAGAGCTCTaGCAGCTGGAGACACTGGAATCGACCACAGGCAGT +
Preference number: 6 (lower is better)
Translates to: KGLGSPTGCREL*QLETLESTTGS
Trigger: ACTGCCTGTGGTCGATTCCAGTGTCTCCAGCTGTCAGAGCTCTCGGCAGCCAGTAGGGGAACCTAACCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS CAA 72 bp GGGTCCTCGTCAATATTCAGGCATGGCCGAGAGCTTTaGGAGGATAGGCTTCTCAGATGCAGCAGCGACGCG +
Preference number: 6 (lower is better)
Translates to: GSSSIFRHGREL*EDRLLRCSSDA
Trigger: CGCGTCGCTGCTGCATCTGAGAAGCCTATCCTCCAAAAGCTCTCGGCCATGCCTGAATATTGACGAGGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS GCA 72 bp CAGTGCGTCTTGCTTAATGGCGGGATCATTCAGATCTaGCCCCTCTGTACTAGGCCCCTCGTCACTGTAGCA +
Preference number: 6 (lower is better)
Translates to: QCVLLNGGIIQI*PLCTRPLVTVA
Trigger: TGCTACAGTGACGAGGGGCCTAGTACAGAGGGGGCAGATCTGAATGATCCCGCCATTAAGCAAGACGCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS GCA 72 bp GAAGTTAGTAAGCCAGCAGCCTTGTTCAGCAGCTCCTaGCTGGCTGTGGGGGTGATGCTATCAGGATGGTTC +
Preference number: 6 (lower is better)
Translates to: EVSKPAALFSSS*LAVGVMLSGWF
Trigger: GAACCATCCTGATAGCATCACCCCCACAGCCAGGCAGGAGCTGCTGAACAAGGCTGCTGGCTTACTAACTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS TCA 72 bp CAGCCTTGTTCAGCAGCTCCTGCCTGGCTGTGGGGGTaGTGCTATCAGGATGGTTCTGATGCTGAGTTCTTA +
Preference number: 6 (lower is better)
Translates to: QPCSAAPAWLWG*CYQDGSDAEFL
Trigger: TAAGAACTCAGCATCAGAACCATCCTGATAGCATCACCCCCACAGCCAGGCAGGAGCTGCTGAACAAGGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS GCA 72 bp GGCTCCAAGATCCACCTCTCCAGTAACAGTGCGTCTTaGTTAATGGCGGGATCATTCAGATCTGCCCCCTCT +
Preference number: 6 (lower is better)
Translates to: GSKIHLSSNSAS*LMAGSFRSAPS
Trigger: AGAGGGGGCAGATCTGAATGATCCCGCCATTAAGCAAGACGCACTGTTACTGGAGAGGTGGATCTTGGAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS GCA 72 bp TGTTCTAGGTGCTGTGCAATCCTGGCTATGACGTCCTaGCGCTCCTGGAGTAAAGAGCCAATCAGTGGGTTC +
Preference number: 6 (lower is better)
Translates to: CSRCCAILAMTS*RSWSKEPISGF
Trigger: GAACCCACTGATTGGCTCTTTACTCCAGGAGCGGCAGGACGTCATAGCCAGGATTGCACAGCACCTAGAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS GCA 72 bp TTTAGAAGGAATGGAATTGGAGTCGTGCTTGCTGAATaGAGGCCGGGGAATGTGAGCTGCGGGGTCGATGTG +
Preference number: 6 (lower is better)
Translates to: FRRNGIGVVLAE*RPGNVSCGVDV
Trigger: CACATCGACCCCGCAGCTCACATTCCCCGGCCTGCATTCAGCAAGCACGACTCCAATTCCATTCCTTCTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS GCA 72 bp AGTCCTCAACATGTCTGCGCTGTGCAGCCTCTCGCCTaGAGACAAACAGTGCTTTACGCTGTGAGGTTTTCC +
Preference number: 6 (lower is better)
Translates to: SPQHVCAVQPLA*RQTVLYAVRFS
Trigger: GGAAAACCTCACAGCGTAAAGCACTGTTTGTCTGCAGGCGAGAGGCTGCACAGCGCAGACATGTTGAGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS CAA 72 bp CAGCTGGAGACACTGGAATCGACCACAGGCAGTGATTaGAACGTTCTCACTGACGCCTCCTGTGACCTCACT +
Preference number: 6 (lower is better)
Translates to: QLETLESTTGSD*NVLTDASCDLT
Trigger: AGTGAGGTCACAGGAGGCGTCAGTGAGAACGTTCAAATCACTGCCTGTGGTCGATTCCAGTGTCTCCAGCTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS CAA 90 bp AGGCCACATTGTGAGAGACATTGGGGACGGGAAACACATGCTCAGTaGGAGTCTGTGAAAAACTCCACTGCAGGTCGACATCCGCAGCAC +
Preference number: 6 (lower is better)
Translates to: RPHCERHWGRETHAQ*ESVKNSTAGRHPQH
Trigger: GTGCTGCGGATGTCGACCTGCAGTGGAGTTTTTCACAGACTCCAACTGAGCATGTGTTTCCCGTCCCCAATGTCTCTCACAATGTGGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS TCA 72 bp ATTGGGGACGGGAAACACATGCTCAGTTGGAGTCTGTaGAAAACTCCACTGCAGGTCGACATCCGCAGCACT +
Preference number: 6 (lower is better)
Translates to: IGDGKHMLSWSL*KTPLQVDIRST
Trigger: AGTGCTGCGGATGTCGACCTGCAGTGGAGTTTTTCACAGACTCCAACTGAGCATGTGTTTCCCGTCCCCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS TCA 72 bp AGCTGGAGACACTGGAATCGACCACAGGCAGTGATTTaGACGTTCTCACTGACGCCTCCTGTGACCTCACTT +
Preference number: 6 (lower is better)
Translates to: SWRHWNRPQAVI*TFSLTPPVTSL
Trigger: AAGTGAGGTCACAGGAGGCGTCAGTGAGAACGTTCAAATCACTGCCTGTGGTCGATTCCAGTGTCTCCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS TCA 72 bp TATCTCCTCACACACCCACTTTCCTGTGAAACTGGGTaGAGCTTTGGGCTAAGTGACGTGGACTCCTGGGTG +
Preference number: 6 (lower is better)
Translates to: YLLTHPLSCETG*SFGLSDVDSWV
Trigger: CACCCAGGAGTCCACGTCACTTAGCCCAAAGCTTCACCCAGTTTCACAGGAAAGTGGGTGTGTGAGGAGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS TCA 72 bp GTCCCTTTTTGCCTCCTGCTCAGTTTTGAGTCGGTCTaGTACAGTGCTTCCGGGACCCTCATTCTCTTCACT +
Preference number: 6 (lower is better)
Translates to: VPFCLLLSFESV*YSASGTLILFT
Trigger: AGTGAAGAGAATGAGGGTCCCGGAAGCACTGTATCAGACCGACTCAAAACTGAGCAGGAGGCAAAAAGGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS GCA 72 bp GAATGTTTCAGTGTAGTCCTCAACATGTCTGCGCTGTaGAGCCTCTCGCCTGCAGACAAACAGTGCTTTACG +
Preference number: 6 (lower is better)
Translates to: ECFSVVLNMSAL*SLSPADKQCFT
Trigger: CGTAAAGCACTGTTTGTCTGCAGGCGAGAGGCTGCACAGCGCAGACATGTTGAGGACTACACTGAAACATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS TCA 72 bp CCGGATAATGAGCTTGTCTGGGTAAGGACTGAACGCTaGCTTTCAAGGCCACATTGTGAGAGACATTGGGGA +
Preference number: 6 (lower is better)
Translates to: PDNELVWVRTER*LSRPHCERHWG
Trigger: TCCCCAATGTCTCTCACAATGTGGCCTTGAAAGTCAGCGTTCAGTCCTTACCCAGACAAGCTCATTATCCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS CAA 72 bp TGTGAGAGACATTGGGGACGGGAAACACATGCTCAGTaGGAGTCTGTGAAAAACTCCACTGCAGGTCGACAT +
Preference number: 6 (lower is better)
Translates to: CERHWGRETHAQ*ESVKNSTAGRH
Trigger: ATGTCGACCTGCAGTGGAGTTTTTCACAGACTCCAACTGAGCATGTGTTTCCCGTCCCCAATGTCTCTCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS TCA 72 bp CCATCACCTCTGTCTCCCAATAAGGACACTTCTGTATaGGACACAGAGACAGAGACATTCTCTCTGCCCTTC +
Preference number: 6 (lower is better)
Translates to: PSPLSPNKDTSV*DTETETFSLPF
Trigger: GAAGGGCAGAGAGAATGTCTCTGTCTCTGTGTCTCATACAGAAGTGTCCTTATTGGGAGACAGAGGTGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS GCA 72 bp GGAGCCAAACTCTGGACTCCCAAAGGAGACAGAGAATaGTTCTTTATATCTCCTCACACACCCACTTTCCTG +
Preference number: 6 (lower is better)
Translates to: GAKLWTPKGDRE*FFISPHTPTFL
Trigger: CAGGAAAGTGGGTGTGTGAGGAGATATAAAGAAGCATTCTCTGTCTCCTTTGGGAGTCCAGAGTTTGGCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS CCA 72 bp AGAGGAGAGGCAGCCCCGTCTGAGGATGAAAGGCTCTaGTTGATGTCCCATCCAAGGAATGAAAATTATGTT +
Preference number: 6 (lower is better)
Translates to: RGEAAPSEDERL*LMSHPRNENYV
Trigger: AACATAATTTTCATTCCTTGGATGGGACATCAACCAGAGCCTTTCATCCTCAGACGGGGCTGCCTCTCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS CCA 72 bp GACATCCGCAGCACTGATTCTGTAAAGAATGTTTCGTaGAATAGCACCATGAGAAACACTCAGCCAAGCACT +
Preference number: 6 (lower is better)
Translates to: DIRSTDSVKNVS*NSTMRNTQPST
Trigger: AGTGCTTGGCTGAGTGTTTCTCATGGTGCTATTCCACGAAACATTCTTTACAGAATCAGTGCTGCGGATGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS CAA 72 bp AGGGCCATGGTGCTGACAGGCTCTAAGCTCCTGTTCTaGAATTCTCTTCTCATACAGACCAATGTTAGTATG +
Preference number: 6 (lower is better)
Translates to: RAMVLTGSKLLF*NSLLIQTNVSM
Trigger: CATACTAACATTGGTCTGTATGAGAAGAGAATTCAAGAACAGGAGCTTAGAGCCTGTCAGCACCATGGCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS TCA 72 bp GGAGATGACGGAGAGATCCTGGACTATGCTCGTCGTTaGTTTTCTCCGTACATGTATTTGTGCAAATCTGTT +
Preference number: 6 (lower is better)
Translates to: GDDGEILDYARR*FSPYMYLCKSV
Trigger: AACAGATTTGCACAAATACATGTACGGAGAAAATCAACGACGAGCATAGTCCAGGATCTCTCCGTCATCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS GCA 72 bp TCACTGAGGTCATTTTCTGTGCCAACCCGAATGCTTTaGTCACACGTCTTGGATCTTTTGGAGTCTTTACTT +
Preference number: 6 (lower is better)
Translates to: SLRSFSVPTRML*SHVLDLLESLL
Trigger: AAGTAAAGACTCCAAAAGATCCAAGACGTGTGAGCAAAGCATTCGGGTTGGCACAGAAAATGACCTCAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS CAA 72 bp CTTTCCAATCTGCTAACCAAACCCAAGCTGCTTTCTTaGCAGAGAGCTGTGTTAGAGGAAGTTAGTAAGCCA +
Preference number: 6 (lower is better)
Translates to: LSNLLTKPKLLS*QRAVLEEVSKP
Trigger: TGGCTTACTAACTTCCTCTAACACAGCTCTCTGCAAAGAAAGCAGCTTGGGTTTGGTTAGCAGATTGGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS CAA 72 bp TTCACTGAGGTCATTTTCTGTGCCAACCCGAATGCTTaGCTCACACGTCTTGGATCTTTTGGAGTCTTTACT +
Preference number: 6 (lower is better)
Translates to: FTEVIFCANPNA*LTRLGSFGVFT
Trigger: AGTAAAGACTCCAAAAGATCCAAGACGTGTGAGCAAAGCATTCGGGTTGGCACAGAAAATGACCTCAGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS CAA 90 bp CAGGCATTTCCAGCAGAGTCACTTTTAGTTTTGAGTCAATACCTTTaGAATCATCACACTGGAGATGACGGAGAGATCCTGGACTATGCT +
Preference number: 6 (lower is better)
Translates to: QAFPAESLLVLSQYL*NHHTGDDGEILDYA
Trigger: AGCATAGTCCAGGATCTCTCCGTCATCTCCAGTGTGATGATTCAAAAGGTATTGACTCAAAACTAAAAGTGACTCTGCTGGAAATGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS TCA 72 bp TTTGAGTCAATACCTTTTGAATCATCACACTGGAGATaGCGGAGAGATCCTGGACTATGCTCGTCGTTGATT +
Preference number: 6 (lower is better)
Translates to: FESIPFESSHWR*RRDPGLCSSLI
Trigger: AATCAACGACGAGCATAGTCCAGGATCTCTCCGTCATCTCCAGTGTGATGATTCAAAAGGTATTGACTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS CAA 72 bp CCAGCAGAGTCACTTTTAGTTTTGAGTCAATACCTTTaGAATCATCACACTGGAGATGACGGAGAGATCCTG +
Preference number: 6 (lower is better)
Translates to: PAESLLVLSQYL*NHHTGDDGEIL
Trigger: CAGGATCTCTCCGTCATCTCCAGTGTGATGATTCAAAAGGTATTGACTCAAAACTAAAAGTGACTCTGCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS GCA 72 bp CTTCTGTATGAGACACAGAGACAGAGACATTCTCTCTaGCCTTCTTCAACAAGGTTTTGTCATCAAATGAAC +
Preference number: 6 (lower is better)
Translates to: LLYETQRQRHSL*PSSTRFCHQMN
Trigger: GTTCATTTGATGACAAAACCTTGTTGAAGAAGGGCAGAGAGAATGTCTCTGTCTCTGTGTCTCATACAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS CAA 90 bp TCTTGTTCAAACTGTCAGGCATTTCCAGCAGAGTCACTTTTAGTTTaGAGTCAATACCTTTTGAATCATCACACTGGAGATGACGGAGAG +
Preference number: 6 (lower is better)
Translates to: SCSNCQAFPAESLLV*SQYLLNHHTGDDGE
Trigger: CTCTCCGTCATCTCCAGTGTGATGATTCAAAAGGTATTGACTCAAAACTAAAAGTGACTCTGCTGGAAATGCCTGACAGTTTGAACAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS CAA 72 bp CCAACCCGAATGCTTTGCTCACACGTCTTGGATCTTTaGGAGTCTTTACTTGAACAATTAGTTTTGTTCTTG +
Preference number: 6 (lower is better)
Translates to: PTRMLCSHVLDL*ESLLEQLVLFL
Trigger: CAAGAACAAAACTAATTGTTCAAGTAAAGACTCCAAAAGATCCAAGACGTGTGAGCAAAGCATTCGGGTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS CAA 72 bp TTTTCTGTGCCAACCCGAATGCTTTGCTCACACGTCTaGGATCTTTTGGAGTCTTTACTTGAACAATTAGTT +
Preference number: 6 (lower is better)
Translates to: FSVPTRMLCSHV*DLLESLLEQLV
Trigger: AACTAATTGTTCAAGTAAAGACTCCAAAAGATCCAAGACGTGTGAGCAAAGCATTCGGGTTGGCACAGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS CAA 90 bp TTTTCTGTGCCAACCCGAATGCTTTGCTCACACGTCTTGGATCTTTaGGAGTCTTTACTTGAACAATTAGTTTTGTTCTTGTTCAAACTG +
Preference number: 6 (lower is better)
Translates to: FSVPTRMLCSHVLDL*ESLLEQLVLFLFKL
Trigger: CAGTTTGAACAAGAACAAAACTAATTGTTCAAGTAAAGACTCCAAAAGATCCAAGACGTGTGAGCAAAGCATTCGGGTTGGCACAGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS CAA 90 bp TCACACGTCTTGGATCTTTTGGAGTCTTTACTTGAACAATTAGTTTaGTTCTTGTTCAAACTGTCAGGCATTTCCAGCAGAGTCACTTTT +
Preference number: 6 (lower is better)
Translates to: SHVLDLLESLLEQLV*FLFKLSGISSRVTF
Trigger: AAAAGTGACTCTGCTGGAAATGCCTGACAGTTTGAACAAGAACAAAACTAATTGTTCAAGTAAAGACTCCAAAAGATCCAAGACGTGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS TCA 72 bp TTGCTCACACGTCTTGGATCTTTTGGAGTCTTTACTTaGACAATTAGTTTTGTTCTTGTTCAAACTGTCAGG +
Preference number: 6 (lower is better)
Translates to: LLTRLGSFGVFT*TISFVLVQTVR
Trigger: CCTGACAGTTTGAACAAGAACAAAACTAATTGTTCAAGTAAAGACTCCAAAAGATCCAAGACGTGTGAGCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS CAA 72 bp GTACATGTATTTGTGCAAATCTGTTTGTCAATACTGTaGCAATGCAAACACTGTTTCTCAGTTTCATGGCTC +
Preference number: 6 (lower is better)
Translates to: VHVFVQICLSIL*QCKHCFSVSWL
Trigger: GAGCCATGAAACTGAGAAACAGTGTTTGCATTGCAACAGTATTGACAAACAGATTTGCACAAATACATGTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS CAA 72 bp CTTTTGGAGTCTTTACTTGAACAATTAGTTTTGTTCTaGTTCAAACTGTCAGGCATTTCCAGCAGAGTCACT +
Preference number: 6 (lower is better)
Translates to: LLESLLEQLVLF*FKLSGISSRVT
Trigger: AGTGACTCTGCTGGAAATGCCTGACAGTTTGAACAAGAACAAAACTAATTGTTCAAGTAAAGACTCCAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS CAA 90 bp ATTTTCTCCGTACATGTATTTGTGCAAATCTGTTTGTCAATACTGTaGCAATGCAAACACTGTTTCTCAGTTTCATGGCTCATTTCTTGC +
Preference number: 6 (lower is better)
Translates to: IFSVHVFVQICLSIL*QCKHCFSVSWLISC
Trigger: GCAAGAAATGAGCCATGAAACTGAGAAACAGTGTTTGCATTGCAACAGTATTGACAAACAGATTTGCACAAATACATGTACGGAGAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS GCA 72 bp TACATGTATTTGTGCAAATCTGTTTGTCAATACTGTTaGAATGCAAACACTGTTTCTCAGTTTCATGGCTCA +
Preference number: 6 (lower is better)
Translates to: YMYLCKSVCQYC*NANTVSQFHGS
Trigger: TGAGCCATGAAACTGAGAAACAGTGTTTGCATTGCAACAGTATTGACAAACAGATTTGCACAAATACATGTA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS CAA 72 bp TTGGATCTTTTGGAGTCTTTACTTGAACAATTAGTTTaGTTCTTGTTCAAACTGTCAGGCATTTCCAGCAGA +
Preference number: 6 (lower is better)
Translates to: LDLLESLLEQLV*FLFKLSGISSR
Trigger: TCTGCTGGAAATGCCTGACAGTTTGAACAAGAACAAAACTAATTGTTCAAGTAAAGACTCCAAAAGATCCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2
CDS CAA 72 bp TTGATTTTCTCCGTACATGTATTTGTGCAAATCTGTTaGTCAATACTGTTGCAATGCAAACACTGTTTCTCA +
Preference number: 6 (lower is better)
Translates to: LIFSVHVFVQIC*SILLQCKHCFS
Trigger: TGAGAAACAGTGTTTGCATTGCAACAGTATTGACAAACAGATTTGCACAAATACATGTACGGAGAAAATCAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000081746.7
ENSMUST00000170846.8
ENSMUST00000214755.2
ENSMUST00000215370.2