Pregenerated sensors for FAM210B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027495Ensembl transcript IDs: ENSMUST00000028995.5
Found 108 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGTGGACTGAACATGGCCGGGGGATCCGTGAGACGGAGAGGAAACTaGCACAGGATAGAGAATCGAGCACAGAGAGGACCAGGAGCCAAG | + |
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Preference number: 1 (lower is better) Translates to: GGLNMAGGSVRRRGN*HRIENRAQRGPGAK Trigger: CTTGGCTCCTGGTCCTCTCTGTGCTCGATTCTCTATCCTGTGCCAGTTTCCTCTCCGTCTCACGGATCCCCCGGCCATGTTCAGTCCACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
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| 3UTR CCA 90 bp | GCTGGTTATAAGGACAGGCAGCTGGGGGACGGGAAGCCTGTGAGTTaGGGGCAGTTTAGGGTAGGGAGGACAAGAAGGGCTAGGAACACT | + |
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Preference number: 1 (lower is better) Translates to: AGYKDRQLGDGKPVS*GQFRVGRTRRARNT Trigger: AGTGTTCCTAGCCCTTCTTGTCCTCCCTACCCTAAACTGCCCCCAACTCACAGGCTTCCCGTCCCCCAGCTGCCTGTCCTTATAACCAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
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| 3UTR GCA 90 bp | AAGCACAGAACACAGGCTCAGTGGAGAGGCCTCTTCCAGTCCACCTaGCACTGGCCTGGAGCATCTTGGCTCAGCTATGTGGATGTCCTT | + |
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Preference number: 1 (lower is better) Translates to: KHRTQAQWRGLFQST*HWPGASWLSYVDVL Trigger: AAGGACATCCACATAGCTGAGCCAAGATGCTCCAGGCCAGTGGCAGGTGGACTGGAAGAGGCCTCTCCACTGAGCCTGTGTTCTGTGCTT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
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| 3UTR CCA 90 bp | CCATCCCATCCAGCCTCGAAGTGGATGGGGCACATGACAAGTTCTTaGCCTGCTTTCCCCACAGCAAGTGCTGCGAATGTCAAGGGCTTG | + |
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Preference number: 1 (lower is better) Translates to: PSHPASKWMGHMTSS*PAFPTASAANVKGL Trigger: CAAGCCCTTGACATTCGCAGCACTTGCTGTGGGGAAAGCAGGCCAAGAACTTGTCATGTGCCCCATCCACTTCGAGGCTGGATGGGATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
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| 3UTR CCA 90 bp | AGAACACAGGCTCAGTGGAGAGGCCTCTTCCAGTCCACCTGCCACTaGCCTGGAGCATCTTGGCTCAGCTATGTGGATGTCCTTGGAATC | + |
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Preference number: 1 (lower is better) Translates to: RTQAQWRGLFQSTCH*PGASWLSYVDVLGI Trigger: GATTCCAAGGACATCCACATAGCTGAGCCAAGATGCTCCAGGCCAGTGGCAGGTGGACTGGAAGAGGCCTCTCCACTGAGCCTGTGTTCT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
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| 3UTR CCA 90 bp | ACAGGCTCAGTGGAGAGGCCTCTTCCAGTCCACCTGCCACTGGCCTaGAGCATCTTGGCTCAGCTATGTGGATGTCCTTGGAATCAGTTT | + |
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Preference number: 1 (lower is better) Translates to: TGSVERPLPVHLPLA*SILAQLCGCPWNQF Trigger: AAACTGATTCCAAGGACATCCACATAGCTGAGCCAAGATGCTCCAGGCCAGTGGCAGGTGGACTGGAAGAGGCCTCTCCACTGAGCCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
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| 3UTR GCA 90 bp | TCACATAGGCAGGAGCAGCTCTGTGCGCCTTGCTGGCTTATACGGTaGTTTAGTTGCTTCACCTCAACTCTTGCTGTGTTCTGGCTGCTG | + |
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Preference number: 1 (lower is better) Translates to: SHRQEQLCAPCWLIR*FSCFTSTLAVFWLL Trigger: CAGCAGCCAGAACACAGCAAGAGTTGAGGTGAAGCAACTAAAGCACCGTATAAGCCAGCAAGGCGCACAGAGCTGCTCCTGCCTATGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
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| 3UTR CCA 90 bp | CTTATACGGTGCTTTAGTTGCTTCACCTCAACTCTTGCTGTGTTCTaGCTGCTGGGTAGAGGCCTGAGAGCGGGGCTAGGTTTGGAAGAT | + |
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Preference number: 1 (lower is better) Translates to: LIRCFSCFTSTLAVF*LLGRGLRAGLGLED Trigger: ATCTTCCAAACCTAGCCCCGCTCTCAGGCCTCTACCCAGCAGCCAGAACACAGCAAGAGTTGAGGTGAAGCAACTAAAGCACCGTATAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
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| 3UTR GCA 90 bp | GATGGGGCACATGACAAGTTCTTGGCCTGCTTTCCCCACAGCAAGTaGTGCGAATGTCAAGGGCTTGATGGTAATGTGGATCGTGGTTAT | + |
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Preference number: 1 (lower is better) Translates to: DGAHDKFLACFPHSK*CECQGLDGNVDRGY Trigger: ATAACCACGATCCACATTACCATCAAGCCCTTGACATTCGCAGCACTTGCTGTGGGGAAAGCAGGCCAAGAACTTGTCATGTGCCCCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
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| 3UTR CCA 90 bp | TCCGCCTCCAGAGCAGCTGGCTTTACTGGCCTGTACCACCAGGCCTaGCTGTCAACTCATTTTGATGCCTTGGTGACATTTTTAAGTCAT | + |
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Preference number: 1 (lower is better) Translates to: SASRAAGFTGLYHQA*LSTHFDALVTFLSH Trigger: ATGACTTAAAAATGTCACCAAGGCATCAAAATGAGTTGACAGCCAGGCCTGGTGGTACAGGCCAGTAAAGCCAGCTGCTCTGGAGGCGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
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| 3UTR CCA 90 bp | CTTGAGCCCTGGAGCCAATTCTTGCTCTGTCTGCTCCTGACTTCGTaGAGGAGGAAGCCTCAGTTTGAGTCTCTGCTTGACTTTCTATTC | + |
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Preference number: 1 (lower is better) Translates to: LEPWSQFLLCLLLTS*RRKPQFESLLDFLF Trigger: GAATAGAAAGTCAAGCAGAGACTCAAACTGAGGCTTCCTCCTCCACGAAGTCAGGAGCAGACAGAGCAAGAATTGGCTCCAGGGCTCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
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| 3UTR GCA 90 bp | GGGGCACATGACAAGTTCTTGGCCTGCTTTCCCCACAGCAAGTGCTaGGAATGTCAAGGGCTTGATGGTAATGTGGATCGTGGTTATTTT | + |
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Preference number: 1 (lower is better) Translates to: GAHDKFLACFPHSKC*ECQGLDGNVDRGYF Trigger: AAAATAACCACGATCCACATTACCATCAAGCCCTTGACATTCGCAGCACTTGCTGTGGGGAAAGCAGGCCAAGAACTTGTCATGTGCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
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| 3UTR CCA 90 bp | TCCAGTCCACCTGCCACTGGCCTGGAGCATCTTGGCTCAGCTATGTaGATGTCCTTGGAATCAGTTTCGGTAATACATCCTGATTTGACA | + |
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Preference number: 1 (lower is better) Translates to: SSPPATGLEHLGSAM*MSLESVSVIHPDLT Trigger: TGTCAAATCAGGATGTATTACCGAAACTGATTCCAAGGACATCCACATAGCTGAGCCAAGATGCTCCAGGCCAGTGGCAGGTGGACTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
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| 3UTR TCA 90 bp | CTCAGCTATGTGGATGTCCTTGGAATCAGTTTCGGTAATACATCCTaGTTTGACATCAGAGGAAGCTTTTTGGCAGTGGGCTGTACTAAG | + |
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Preference number: 1 (lower is better) Translates to: LSYVDVLGISFGNTS*FDIRGSFLAVGCTK Trigger: CTTAGTACAGCCCACTGCCAAAAAGCTTCCTCTGATGTCAAATCAGGATGTATTACCGAAACTGATTCCAAGGACATCCACATAGCTGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
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| 3UTR TCA 90 bp | TGGCAGTATCTAAGGTTCCCCAGAATATGGGCATCAGGAGCCCATTaGCAACATCACAATTGGGCAGTGTTTCTGTATTTTACAAACCAT | + |
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Preference number: 1 (lower is better) Translates to: WQYLRFPRIWASGAH*QHHNWAVFLYFTNH Trigger: ATGGTTTGTAAAATACAGAAACACTGCCCAATTGTGATGTTGTCAATGGGCTCCTGATGCCCATATTCTGGGGAACCTTAGATACTGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
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| 3UTR CCA 90 bp | TCGGTAATACATCCTGATTTGACATCAGAGGAAGCTTTTTGGCAGTaGGCTGTACTAAGGAAAATAAGACAATCCCACTTCAGAGATCTC | + |
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Preference number: 1 (lower is better) Translates to: SVIHPDLTSEEAFWQ*AVLRKIRQSHFRDL Trigger: GAGATCTCTGAAGTGGGATTGTCTTATTTTCCTTAGTACAGCCCACTGCCAAAAAGCTTCCTCTGATGTCAAATCAGGATGTATTACCGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
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| 3UTR CCA 90 bp | TCAGTTTCGGTAATACATCCTGATTTGACATCAGAGGAAGCTTTTTaGCAGTGGGCTGTACTAAGGAAAATAAGACAATCCCACTTCAGA | + |
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Preference number: 1 (lower is better) Translates to: SVSVIHPDLTSEEAF*QWAVLRKIRQSHFR Trigger: TCTGAAGTGGGATTGTCTTATTTTCCTTAGTACAGCCCACTGCCAAAAAGCTTCCTCTGATGTCAAATCAGGATGTATTACCGAAACTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
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| 3UTR CAA 90 bp | ACGCCAGGCTGCCCAGAGGGCAGGCTTGAGCCCTGGAGCCAATTCTaGCTCTGTCTGCTCCTGACTTCGTGGAGGAGGAAGCCTCAGTTT | + |
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Preference number: 2 (lower is better) Translates to: TPGCPEGRLEPWSQF*LCLLLTSWRRKPQF Trigger: AAACTGAGGCTTCCTCCTCCACGAAGTCAGGAGCAGACAGAGCAAGAATTGGCTCCAGGGCTCAAGCCTGCCCTCTGGGCAGCCTGGCGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
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| 3UTR-3UTR CCA 90 bp | AATGGGAGAGCAGCGGGGGTGATGATCCAGAGCCTGAAGCACAGAACACAGGCTCAGTCCACCTGCCACTaGCCTGGAGCATCTTGGCTC | + |
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Preference number: 2 (lower is better) Translates to: NGRAAGVMIQSLKHRTQAQSTCH*PGASWL Trigger: GAGCCAAGATGCTCCAGGCCAGTGGCAGGTGGACTG...AGCCTGTGTTCTGTGCTTCAGGCTCTGGATCATCACCCCCGCTGCTCTCCCATT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
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| 3UTR-3UTR TCA 90 bp | AATGGGAGAGCAGCGGGGGTGATGATCCAGAGCCTGAAGCACAGAACACAGGCTAACCACTGGCACCCATaGGCTGGCAGGCTATGTTCT | + |
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Preference number: 2 (lower is better) Translates to: NGRAAGVMIQSLKHRTQANHWHP*AGRLCS Trigger: AGAACATAGCCTGCCAGCTCATGGGTGCCAGTGGTT...AGCCTGTGTTCTGTGCTTCAGGCTCTGGATCATCACCCCCGCTGCTCTCCCATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
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| 3UTR-3UTR TCA 90 bp | GGAAACTGGCACAGGATAGAGAATCGAGCACAGAGAGGACCAGGAGCCAAGAGGTGCTCTGTCTGCTCCTaGCTTCGTGGAGGAGGAAGC | + |
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Preference number: 2 (lower is better) Translates to: GNWHRIENRAQRGPGAKRCSVCS*LRGGGS Trigger: GCTTCCTCCTCCACGAAGTCAGGAGCAGACAGAGCA...CCTCTTGGCTCCTGGTCCTCTCTGTGCTCGATTCTCTATCCTGTGCCAGTTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
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| 3UTR-3UTR GCA 90 bp | GTGCGCCTTGCTGGCTTATACGGTGCTTTAGTTGCTTCACCTCAACTCTTGCTGTCTGCTGTCAGCTCCTaGCTCCAGGTGCCTGCCCTC | + |
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Preference number: 2 (lower is better) Translates to: VRLAGLYGALVASPQLLLSAVSS*LQVPAL Trigger: GAGGGCAGGCACCTGGAGGCAGGAGCTGACAGCAGA...CAGCAAGAGTTGAGGTGAAGCAACTAAAGCACCGTATAAGCCAGCAAGGCGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
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| 3UTR-3UTR TCA 90 bp | GGAAACTGGCACAGGATAGAGAATCGAGCACAGAGAGGACCAGGAGCCAAGAGGAGGGCGGGCAGGGTTTaGAAAGCCAGCAAATTAACC | + |
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Preference number: 2 (lower is better) Translates to: GNWHRIENRAQRGPGAKRRAGRV*KASKLT Trigger: GGTTAATTTGCTGGCTTTTCAAACCCTGCCCGCCCT...CCTCTTGGCTCCTGGTCCTCTCTGTGCTCGATTCTCTATCCTGTGCCAGTTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
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| 3UTR-3UTR GCA 90 bp | CACCCTTTAGTACAGTTCCTCATGGTGGCCCCCAACCAGAAGGTTATTTTCATTGCTCCTGCCTCCAGGTaGCTGCCCTCCCTGTGTTTG | + |
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Preference number: 2 (lower is better) Translates to: HPLVQFLMVAPNQKVIFIAPASR*LPSLCL Trigger: CAAACACAGGGAGGGCAGGCACCTGGAGGCAGGAGC...AATGAAAATAACCTTCTGGTTGGGGGCCACCATGAGGAACTGTACTAAAGGGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
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| 3UTR CAA 90 bp | GGAGGTTCTTATTATAGACATGAGAACAGCCAGAGGCATCTGAAGTaGAGAGAGAGAGAGGGGTGGACTGAACATGGCCGGGGGATCCGT | + |
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Preference number: 2 (lower is better) Translates to: GGSYYRHENSQRHLK*REREGWTEHGRGIR Trigger: ACGGATCCCCCGGCCATGTTCAGTCCACCCCTCTCTCTCTCTCAACTTCAGATGCCTCTGGCTGTTCTCATGTCTATAATAAGAACCTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
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| 3UTR-3UTR TCA 90 bp | AGCTCTATAAAATGCATTCTGCTAGTTAACAGTTCTCTCCTTTGTCTCCTGGCTGGGACGGGAAGCCTGTaGGTTGGGGGCAGTTTAGGG | + |
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Preference number: 2 (lower is better) Translates to: SSIKCILLVNSSLLCLLAGTGSL*VGGSLG Trigger: CCCTAAACTGCCCCCAACTCACAGGCTTCCCGTCCC...AGCCAGGAGACAAAGGAGAGAACTGTTAACTAGCAGAATGCATTTTATAGAGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
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| 3UTR CAA 90 bp | GATCTAGAGGAACAATTTGTAGGCAGTCTCTTTTTGTGCTGGGGATaGCATTTAGGCCGTCTGTGCCAGGTGAGTAATGACCTCAGCCCT | + |
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Preference number: 2 (lower is better) Translates to: DLEEQFVGSLFLCWG*HLGRLCQVSNDLSP Trigger: AGGGCTGAGGTCATTACTCACCTGGCACAGACGGCCTAAATGCAATCCCCAGCACAAAAAGAGACTGCCTACAAATTGTTCCTCTAGATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
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| 3UTR CAA 90 bp | AGCTCCTGCCTCCAGGTGCCTGCCCTCCCTGTGTTTGATGAAGTGTaGTATGGAACCGTGAGTTTGGTCATTTTGTTTCATCACAGCAAT | + |
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Preference number: 2 (lower is better) Translates to: SSCLQVPALPVFDEV*YGTVSLVILFHHSN Trigger: ATTGCTGTGATGAAACAAAATGACCAAACTCACGGTTCCATACAACACTTCATCAAACACAGGGAGGGCAGGCACCTGGAGGCAGGAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
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| 3UTR-3UTR TCA 90 bp | CTGCTAGTTAACAGTTCTCTCCTTTGTCTCCTGGCTGTCAATGTAATTTCAAAGGCCGTCTGTGCCAGGTaGGTAATGACCTCAGCCCTC | + |
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Preference number: 2 (lower is better) Translates to: LLVNSSLLCLLAVNVISKAVCAR*VMTSAL Trigger: GAGGGCTGAGGTCATTACTCACCTGGCACAGACGGC...CTTTGAAATTACATTGACAGCCAGGAGACAAAGGAGAGAACTGTTAACTAGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
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| 3UTR-3UTR GCA 90 bp | GTTTCGGTAATACATCCTGATTTGACATCAGAGGAAGCTTTTTGGCAGTGGGCTAATTTGAGATCCTCCTaGCTCCGCCTCCAGAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: VSVIHPDLTSEEAFWQWANLRSS*LRLQSS Trigger: GCTGCTCTGGAGGCGGAGGCAGGAGGATCTCAAATT...AGCCCACTGCCAAAAAGCTTCCTCTGATGTCAAATCAGGATGTATTACCGAAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
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| 3UTR-3UTR GCA 90 bp | CACCCTTTAGTACAGTTCCTCATGGTGGCCCCCAACCAGAAGGTTATTTTCATTTATAGACAGCACCTCTaGCCCGATGATCTAGAGGAA | + |
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Preference number: 2 (lower is better) Translates to: HPLVQFLMVAPNQKVIFIYRQHL*PDDLEE Trigger: TTCCTCTAGATCATCGGGGCAGAGGTGCTGTCTATA...AATGAAAATAACCTTCTGGTTGGGGGCCACCATGAGGAACTGTACTAAAGGGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
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| 3UTR-3UTR CCA 90 bp | TTGCGGGGAGGTTCTTATTATAGACATGAGAACAGCCAGAGGCATCTGAAGTTGCTGTACCACCAGGCCTaGCTGTCAACTCATTTTGAT | + |
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Preference number: 2 (lower is better) Translates to: LRGGSYYRHENSQRHLKLLYHQA*LSTHFD Trigger: ATCAAAATGAGTTGACAGCCAGGCCTGGTGGTACAG...CAACTTCAGATGCCTCTGGCTGTTCTCATGTCTATAATAAGAACCTCCCCGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
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| 3UTR-3UTR CCA 90 bp | CAATCCCACTTCAGAGATCTCACAATGGAGAATTTGTCTCACAAAAACTCCTTTGGGAAGCCTGTGAGTTaGGGGCAGTTTAGGGTAGGG | + |
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Preference number: 2 (lower is better) Translates to: QSHFRDLTMENLSHKNSFGKPVS*GQFRVG Trigger: CCCTACCCTAAACTGCCCCCAACTCACAGGCTTCCC...AAAGGAGTTTTTGTGAGACAAATTCTCCATTGTGAGATCTCTGAAGTGGGATTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
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| 3UTR-3UTR GCA 90 bp | GTTTCGGTAATACATCCTGATTTGACATCAGAGGAAGCTTTTTGGCAGTGGGCTACACAGCCCAAATCTTaGAGATCAGAAGAGACTGGC | + |
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Preference number: 2 (lower is better) Translates to: VSVIHPDLTSEEAFWQWATQPKS*RSEETG Trigger: GCCAGTCTCTTCTGATCTGCAAGATTTGGGCTGTGT...AGCCCACTGCCAAAAAGCTTCCTCTGATGTCAAATCAGGATGTATTACCGAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
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| 3UTR-3UTR GCA 90 bp | GTTTCGGTAATACATCCTGATTTGACATCAGAGGAAGCTTTTTGGCAGTGGGCTGAAAGAAAGCCACCTTaGACACAGCCCAAATCTTGC | + |
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Preference number: 2 (lower is better) Translates to: VSVIHPDLTSEEAFWQWAERKPP*TQPKSC Trigger: GCAAGATTTGGGCTGTGTGCAAGGTGGCTTTCTTTC...AGCCCACTGCCAAAAAGCTTCCTCTGATGTCAAATCAGGATGTATTACCGAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
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| 3UTR-3UTR CCA 90 bp | AGCTCTATAAAATGCATTCTGCTAGTTAACAGTTCTCTCCTTTGTCTCCTGGCTATGAAATCTCAGACTTaGAGCCCCATCCCATCCAGC | + |
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Preference number: 2 (lower is better) Translates to: SSIKCILLVNSSLLCLLAMKSQT*SPIPSS Trigger: GCTGGATGGGATGGGGCTCCAAGTCTGAGATTTCAT...AGCCAGGAGACAAAGGAGAGAACTGTTAACTAGCAGAATGCATTTTATAGAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
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| 3UTR CAA 90 bp | ATGGCAGTATCTAAGGTTCCCCAGAATATGGGCATCAGGAGCCCATaGACAACATCACAATTGGGCAGTGTTTCTGTATTTTACAAACCA | + |
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Preference number: 2 (lower is better) Translates to: MAVSKVPQNMGIRSP*TTSQLGSVSVFYKP Trigger: TGGTTTGTAAAATACAGAAACACTGCCCAATTGTGATGTTGTCAATGGGCTCCTGATGCCCATATTCTGGGGAACCTTAGATACTGCCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
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| 3UTR CAA 90 bp | CCTGCCCTCCCTGTGTTTGATGAAGTGTTGTATGGAACCGTGAGTTaGGTCATTTTGTTTCATCACAGCAATAGGACCCTAATTAAGACA | + |
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Preference number: 2 (lower is better) Translates to: PALPVFDEVLYGTVS*VILFHHSNRTLIKT Trigger: TGTCTTAATTAGGGTCCTATTGCTGTGATGAAACAAAATGACCAAACTCACGGTTCCATACAACACTTCATCAAACACAGGGAGGGCAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
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| 3UTR-3UTR TCA 90 bp | CTGCTAGTTAACAGTTCTCTCCTTTGTCTCCTGGCTGTCAATGTAATTTCAAAGGCCCTCTCTCACTGGTaGACAAGACACAGTCTTATA | + |
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Preference number: 2 (lower is better) Translates to: LLVNSSLLCLLAVNVISKALSHW*TRHSLI Trigger: TATAAGACTGTGTCTTGTTCACCAGTGAGAGAGGGC...CTTTGAAATTACATTGACAGCCAGGAGACAAAGGAGAGAACTGTTAACTAGCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
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| 3UTR-3UTR CCA 90 bp | TATGGAACCGTGAGTTTGGTCATTTTGTTTCATCACAGCAATAGGACCCTAATTCACATGACAAGTTCTTaGCCTGCTTTCCCCACAGCA | + |
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Preference number: 2 (lower is better) Translates to: YGTVSLVILFHHSNRTLIHMTSS*PAFPTA Trigger: TGCTGTGGGGAAAGCAGGCCAAGAACTTGTCATGTG...AATTAGGGTCCTATTGCTGTGATGAAACAAAATGACCAAACTCACGGTTCCATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
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| 3UTR CAA 90 bp | GTTCCCCAGAATATGGGCATCAGGAGCCCATTGACAACATCACAATaGGGCAGTGTTTCTGTATTTTACAAACCATATTGCCTAGTATCA | + |
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Preference number: 2 (lower is better) Translates to: VPQNMGIRSPLTTSQ*GSVSVFYKPYCLVS Trigger: TGATACTAGGCAATATGGTTTGTAAAATACAGAAACACTGCCCAATTGTGATGTTGTCAATGGGCTCCTGATGCCCATATTCTGGGGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
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| 3UTR-3UTR TCA 90 bp | TATGGAACCGTGAGTTTGGTCATTTTGTTTCATCACAGCAATAGGACCCTAATTTGCTTTTTAAGAATCTaGGCAAAGGTTAGCCCCCGG | + |
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Preference number: 2 (lower is better) Translates to: YGTVSLVILFHHSNRTLICFLRI*AKVSPR Trigger: CCGGGGGCTAACCTTTGCTCAGATTCTTAAAAAGCA...AATTAGGGTCCTATTGCTGTGATGAAACAAAATGACCAAACTCACGGTTCCATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
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| 3UTR-3UTR GCA 90 bp | CCATTGACAACATCACAATTGGGCAGTGTTTCTGTATTTTACAAACCATATTGCTTTCCCCACAGCAAGTaGTGCGAATGTCAAGGGCTT | + |
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Preference number: 2 (lower is better) Translates to: PLTTSQLGSVSVFYKPYCFPHSK*CECQGL Trigger: AAGCCCTTGACATTCGCAGCACTTGCTGTGGGGAAA...GCAATATGGTTTGTAAAATACAGAAACACTGCCCAATTGTGATGTTGTCAATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
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| 3UTR CAA 90 bp | GACAACATCACAATTGGGCAGTGTTTCTGTATTTTACAAACCATATaGCCTAGTATCAATGAAATCTCAGACTTGGAGCCCCATCCCATC | + |
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Preference number: 2 (lower is better) Translates to: DNITIGQCFCILQTI*PSINEISDLEPHPI Trigger: GATGGGATGGGGCTCCAAGTCTGAGATTTCATTGATACTAGGCAATATGGTTTGTAAAATACAGAAACACTGCCCAATTGTGATGTTGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
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| 3UTR CAA 90 bp | CCTGTGTTTGATGAAGTGTTGTATGGAACCGTGAGTTTGGTCATTTaGTTTCATCACAGCAATAGGACCCTAATTAAGACATCTCTTTTC | + |
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Preference number: 2 (lower is better) Translates to: PVFDEVLYGTVSLVI*FHHSNRTLIKTSLF Trigger: GAAAAGAGATGTCTTAATTAGGGTCCTATTGCTGTGATGAAACAAAATGACCAAACTCACGGTTCCATACAACACTTCATCAAACACAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
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| 3UTR-3UTR TCA 90 bp | CAATCCCACTTCAGAGATCTCACAATGGAGAATTTGTCTCACAAAAACTCCTTTGCTGTCAACTCATTTTaGTGCCTTGGTGACATTTTT | + |
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Preference number: 2 (lower is better) Translates to: QSHFRDLTMENLSHKNSFAVNSF*CLGDIF Trigger: AAAAATGTCACCAAGGCATCAAAATGAGTTGACAGC...AAAGGAGTTTTTGTGAGACAAATTCTCCATTGTGAGATCTCTGAAGTGGGATTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
||
| 3UTR-3UTR GCA 90 bp | CAATCCCACTTCAGAGATCTCACAATGGAGAATTTGTCTCACAAAAACTCCTTTCTGTCTGCTGAATATTaGATATTAAACCGCAGGCAA | + |
|
Preference number: 2 (lower is better) Translates to: QSHFRDLTMENLSHKNSFLSAEY*ILNRRQ Trigger: TTGCCTGCGGTTTAATATGCAATATTCAGCAGACAG...AAAGGAGTTTTTGTGAGACAAATTCTCCATTGTGAGATCTCTGAAGTGGGATTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
||
| 3UTR CAA 90 bp | CATCACAGCAATAGGACCCTAATTAAGACATCTCTTTTCCCCAGCTaGTATTATTTCTTGGTTTCTTTACAGTTAGAACGAGCAATATTT | + |
|
Preference number: 2 (lower is better) Translates to: HHSNRTLIKTSLFPS*YYFLVSLQLERAIF Trigger: AAATATTGCTCGTTCTAACTGTAAAGAAACCAAGAAATAATACAAGCTGGGGAAAAGAGATGTCTTAATTAGGGTCCTATTGCTGTGATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
||
| 3UTR GCA 72 bp | ACACAGGCTCAGTGGAGAGGCCTCTTCCAGTCCACCTaGCACTGGCCTGGAGCATCTTGGCTCAGCTATGTG | + |
|
Preference number: 3 (lower is better) Translates to: TQAQWRGLFQST*HWPGASWLSYV Trigger: CACATAGCTGAGCCAAGATGCTCCAGGCCAGTGGCAGGTGGACTGGAAGAGGCCTCTCCACTGAGCCTGTGT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
||
| 3UTR CCA 72 bp | GTGGAGAGGCCTCTTCCAGTCCACCTGCCACTGGCCTaGAGCATCTTGGCTCAGCTATGTGGATGTCCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: VERPLPVHLPLA*SILAQLCGCPW Trigger: CCAAGGACATCCACATAGCTGAGCCAAGATGCTCCAGGCCAGTGGCAGGTGGACTGGAAGAGGCCTCTCCAC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
||
| 3UTR-3UTR CAA 90 bp | GGAAACTGGCACAGGATAGAGAATCGAGCACAGAGAGGACCAGGAGCCAAGAGGGCCCAGAGGGCAGGCTaGAGCCCTGGAGCCAATTCT | + |
|
Preference number: 3 (lower is better) Translates to: GNWHRIENRAQRGPGAKRAQRAG*SPGANS Trigger: AGAATTGGCTCCAGGGCTCAAGCCTGCCCTCTGGGC...CCTCTTGGCTCCTGGTCCTCTCTGTGCTCGATTCTCTATCCTGTGCCAGTTTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
||
| 3UTR GCA 72 bp | TCCCTCTACACCAGCGGTACCCAACCTTCCTCATGCTaGCACCCTTTAGTACAGTTCCTCATGGTGGCCCCC | + |
|
Preference number: 3 (lower is better) Translates to: SLYTSGTQPSSC*HPLVQFLMVAP Trigger: GGGGGCCACCATGAGGAACTGTACTAAAGGGTGGCAGCATGAGGAAGGTTGGGTACCGCTGGTGTAGAGGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
||
| 3UTR GCA 72 bp | ACCTCCCTCTACACCAGCGGTACCCAACCTTCCTCATaGTGCCACCCTTTAGTACAGTTCCTCATGGTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: TSLYTSGTQPSS*CHPLVQFLMVA Trigger: GGCCACCATGAGGAACTGTACTAAAGGGTGGCAGCATGAGGAAGGTTGGGTACCGCTGGTGTAGAGGGAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
||
| 3UTR CCA 72 bp | CTCAGACTTGGAGCCCCATCCCATCCAGCCTCGAAGTaGATGGGGCACATGACAAGTTCTTGGCCTGCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: LRLGAPSHPASK*MGHMTSSWPAF Trigger: GAAAGCAGGCCAAGAACTTGTCATGTGCCCCATCCACTTCGAGGCTGGATGGGATGGGGCTCCAAGTCTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
||
| 3UTR-3UTR CAA 90 bp | AATGGGAGAGCAGCGGGGGTGATGATCCAGAGCCTGAAGCACAGAACACAGGCTGGAGGAAGCCTCAGTTaGAGTCTCTGCTTGACTTTC | + |
|
Preference number: 3 (lower is better) Translates to: NGRAAGVMIQSLKHRTQAGGSLS*SLCLTF Trigger: GAAAGTCAAGCAGAGACTCAAACTGAGGCTTCCTCC...AGCCTGTGTTCTGTGCTTCAGGCTCTGGATCATCACCCCCGCTGCTCTCCCATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
||
| 3UTR TCA 72 bp | TTGAGCCCTGGAGCCAATTCTTGCTCTGTCTGCTCCTaGCTTCGTGGAGGAGGAAGCCTCAGTTTGAGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: LSPGANSCSVCS*LRGGGSLSLSL Trigger: GAGACTCAAACTGAGGCTTCCTCCTCCACGAAGTCAGGAGCAGACAGAGCAAGAATTGGCTCCAGGGCTCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
||
| 3UTR CCA 72 bp | CTCTTCCAGTCCACCTGCCACTGGCCTGGAGCATCTTaGCTCAGCTATGTGGATGTCCTTGGAATCAGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: LFQSTCHWPGAS*LSYVDVLGISF Trigger: GAAACTGATTCCAAGGACATCCACATAGCTGAGCCAAGATGCTCCAGGCCAGTGGCAGGTGGACTGGAAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
||
| 3UTR GCA 72 bp | CTCTGTGCGCCTTGCTGGCTTATACGGTGCTTTAGTTaGTTCACCTCAACTCTTGCTGTGTTCTGGCTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: LCAPCWLIRCFS*FTSTLAVFWLL Trigger: CAGCAGCCAGAACACAGCAAGAGTTGAGGTGAAGCAACTAAAGCACCGTATAAGCCAGCAAGGCGCACAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
||
| 3UTR GCA 72 bp | CAGGAGCAGCTCTGTGCGCCTTGCTGGCTTATACGGTaGTTTAGTTGCTTCACCTCAACTCTTGCTGTGTTC | + |
|
Preference number: 3 (lower is better) Translates to: QEQLCAPCWLIR*FSCFTSTLAVF Trigger: GAACACAGCAAGAGTTGAGGTGAAGCAACTAAAGCACCGTATAAGCCAGCAAGGCGCACAGAGCTGCTCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
||
| 3UTR-3UTR CAA 90 bp | TTGGTAGAGAGAGAACCAGTTTCACGGGTTCCCGAGGAATGCTGTCTTTATCTGGCACATGACAAGTTCTaGGCCTGCTTTCCCCACAGC | + |
|
Preference number: 3 (lower is better) Translates to: LVEREPVSRVPEECCLYLAHDKF*ACFPHS Trigger: GCTGTGGGGAAAGCAGGCCAAGAACTTGTCATGTGC...CAGATAAAGACAGCATTCCTCGGGAACCCGTGAAACTGGTTCTCTCTCTACCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
||
| 3UTR TCA 72 bp | GCTAGAGGTTTGACAAAGGAGTTGCAACTCACAAGTTaGGAACCACTGGCACCCATGAGCTGGCAGGCTATG | + |
|
Preference number: 3 (lower is better) Translates to: ARGLTKELQLTS*EPLAPMSWQAM Trigger: CATAGCCTGCCAGCTCATGGGTGCCAGTGGTTCTCAACTTGTGAGTTGCAACTCCTTTGTCAAACCTCTAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
||
| 3UTR CCA 72 bp | AGAGCAGCTGGCTTTACTGGCCTGTACCACCAGGCCTaGCTGTCAACTCATTTTGATGCCTTGGTGACATTT | + |
|
Preference number: 3 (lower is better) Translates to: RAAGFTGLYHQA*LSTHFDALVTF Trigger: AAATGTCACCAAGGCATCAAAATGAGTTGACAGCCAGGCCTGGTGGTACAGGCCAGTAAAGCCAGCTGCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
||
| 3UTR CCA 72 bp | CCTGCCACTGGCCTGGAGCATCTTGGCTCAGCTATGTaGATGTCCTTGGAATCAGTTTCGGTAATACATCCT | + |
|
Preference number: 3 (lower is better) Translates to: PATGLEHLGSAM*MSLESVSVIHP Trigger: AGGATGTATTACCGAAACTGATTCCAAGGACATCCACATAGCTGAGCCAAGATGCTCCAGGCCAGTGGCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
||
| 3UTR CCA 72 bp | AGATCACATAGGCAGGAGCAGCTCTGTGCGCCTTGCTaGCTTATACGGTGCTTTAGTTGCTTCACCTCAACT | + |
|
Preference number: 3 (lower is better) Translates to: RSHRQEQLCAPC*LIRCFSCFTST Trigger: AGTTGAGGTGAAGCAACTAAAGCACCGTATAAGCCAGCAAGGCGCACAGAGCTGCTCCTGCCTATGTGATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
||
| 3UTR-3UTR CAA 90 bp | TTGGTAGAGAGAGAACCAGTTTCACGGGTTCCCGAGGAATGCTGTCTTTATCTGCAGGGCGGGCAGGGTTaGAAAAGCCAGCAAATTAAC | + |
|
Preference number: 3 (lower is better) Translates to: LVEREPVSRVPEECCLYLQGGQG*KSQQIN Trigger: GTTAATTTGCTGGCTTTTCAAACCCTGCCCGCCCTG...CAGATAAAGACAGCATTCCTCGGGAACCCGTGAAACTGGTTCTCTCTCTACCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
||
| 3UTR GCA 72 bp | CATGACAAGTTCTTGGCCTGCTTTCCCCACAGCAAGTaGTGCGAATGTCAAGGGCTTGATGGTAATGTGGAT | + |
|
Preference number: 3 (lower is better) Translates to: HDKFLACFPHSK*CECQGLDGNVD Trigger: ATCCACATTACCATCAAGCCCTTGACATTCGCAGCACTTGCTGTGGGGAAAGCAGGCCAAGAACTTGTCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
||
| 3UTR-3UTR CAA 90 bp | CCAGAATATGGGCATCAGGAGCCCATTGACAACATCACAATTGGGCAGTGTTTCAATGAAATCTCAGACTaGGAGCCCCATCCCATCCAG | + |
|
Preference number: 3 (lower is better) Translates to: PEYGHQEPIDNITIGQCFNEISD*EPHPIQ Trigger: CTGGATGGGATGGGGCTCCAAGTCTGAGATTTCATT...GAAACACTGCCCAATTGTGATGTTGTCAATGGGCTCCTGATGCCCATATTCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
||
| 3UTR CCA 72 bp | AAACCATATTGCCTAGTATCAATGAAATCTCAGACTTaGAGCCCCATCCCATCCAGCCTCGAAGTGGATGGG | + |
|
Preference number: 3 (lower is better) Translates to: KPYCLVSMKSQT*SPIPSSLEVDG Trigger: CCCATCCACTTCGAGGCTGGATGGGATGGGGCTCCAAGTCTGAGATTTCATTGATACTAGGCAATATGGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
||
| 3UTR-3UTR CAA 90 bp | CACCCTTTAGTACAGTTCCTCATGGTGGCCCCCAACCAGAAGGTTATTTTCATTCACACAGCCCAAATCTaGCAGATCAGAAGAGACTGG | + |
|
Preference number: 3 (lower is better) Translates to: HPLVQFLMVAPNQKVIFIHTAQI*QIRRDW Trigger: CCAGTCTCTTCTGATCTGCAAGATTTGGGCTGTGTG...AATGAAAATAACCTTCTGGTTGGGGGCCACCATGAGGAACTGTACTAAAGGGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
||
| 3UTR-3UTR CAA 90 bp | GTTTCGGTAATACATCCTGATTTGACATCAGAGGAAGCTTTTTGGCAGTGGGCTCTGCCCTCCCTGTGTTaGATGAAGTGTTGTATGGAA | + |
|
Preference number: 3 (lower is better) Translates to: VSVIHPDLTSEEAFWQWALPSLC*MKCCME Trigger: TTCCATACAACACTTCATCAAACACAGGGAGGGCAG...AGCCCACTGCCAAAAAGCTTCCTCTGATGTCAAATCAGGATGTATTACCGAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
||
| 3UTR-3UTR CAA 90 bp | TTGGTAGAGAGAGAACCAGTTTCACGGGTTCCCGAGGAATGCTGTCTTTATCTGAGTTTGAGTCTCTGCTaGACTTTCTATTCCAACCTC | + |
|
Preference number: 3 (lower is better) Translates to: LVEREPVSRVPEECCLYLSLSLC*TFYSNL Trigger: GAGGTTGGAATAGAAAGTCAAGCAGAGACTCAAACT...CAGATAAAGACAGCATTCCTCGGGAACCCGTGAAACTGGTTCTCTCTCTACCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
||
| 3UTR TCA 72 bp | GTGGATGTCCTTGGAATCAGTTTCGGTAATACATCCTaGTTTGACATCAGAGGAAGCTTTTTGGCAGTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: VDVLGISFGNTS*FDIRGSFLAVG Trigger: GCCCACTGCCAAAAAGCTTCCTCTGATGTCAAATCAGGATGTATTACCGAAACTGATTCCAAGGACATCCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
||
| 3UTR-3UTR CAA 90 bp | AGCTCTATAAAATGCATTCTGCTAGTTAACAGTTCTCTCCTTTGTCTCCTGGCTGGAAAGAAAGCCACCTaGCACACAGCCCAAATCTTG | + |
|
Preference number: 3 (lower is better) Translates to: SSIKCILLVNSSLLCLLAGKKAT*HTAQIL Trigger: CAAGATTTGGGCTGTGTGCAAGGTGGCTTTCTTTCC...AGCCAGGAGACAAAGGAGAGAACTGTTAACTAGCAGAATGCATTTTATAGAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
||
| 3UTR TCA 72 bp | CTAAGGTTCCCCAGAATATGGGCATCAGGAGCCCATTaGCAACATCACAATTGGGCAGTGTTTCTGTATTTT | + |
|
Preference number: 3 (lower is better) Translates to: LRFPRIWASGAH*QHHNWAVFLYF Trigger: AAAATACAGAAACACTGCCCAATTGTGATGTTGTCAATGGGCTCCTGATGCCCATATTCTGGGGAACCTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
||
| 3UTR-3UTR CAA 90 bp | CACCCTTTAGTACAGTTCCTCATGGTGGCCCCCAACCAGAAGGTTATTTTCATTGTGAGTTTGGTCATTTaGTTTCATCACAGCAATAGG | + |
|
Preference number: 3 (lower is better) Translates to: HPLVQFLMVAPNQKVIFIVSLVI*FHHSNR Trigger: CCTATTGCTGTGATGAAACAAAATGACCAAACTCAC...AATGAAAATAACCTTCTGGTTGGGGGCCACCATGAGGAACTGTACTAAAGGGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
||
| 3UTR TCA 72 bp | CCCTCCCTGTGTTTGATGAAGTGTTGTATGGAACCGTaGGTTTGGTCATTTTGTTTCATCACAGCAATAGGA | + |
|
Preference number: 3 (lower is better) Translates to: PSLCLMKCCMEP*VWSFCFITAIG Trigger: TCCTATTGCTGTGATGAAACAAAATGACCAAACTCACGGTTCCATACAACACTTCATCAAACACAGGGAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
||
| 3UTR CCA 72 bp | CGGGGGAGAACTATAGATGTATGGTTATACTTCGTATaGTTGCGGGGAGGTTCTTATTATAGACATGAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: RGRTIDVWLYFV*LRGGSYYRHEN Trigger: GTTCTCATGTCTATAATAAGAACCTCCCCGCAACCATACGAAGTATAACCATACATCTATAGTTCTCCCCCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
||
| 3UTR-3UTR CAA 90 bp | AGCTCTATAAAATGCATTCTGCTAGTTAACAGTTCTCTCCTTTGTCTCCTGGCTGGGATGGAGTTTGTTTaGGATATGACAGAACAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: SSIKCILLVNSSLLCLLAGMEFV*DMTEQN Trigger: GTTCTGTTCTGTCATATCCAAAACAAACTCCATCCC...AGCCAGGAGACAAAGGAGAGAACTGTTAACTAGCAGAATGCATTTTATAGAGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
||
| 3UTR CCA 72 bp | GTAATACATCCTGATTTGACATCAGAGGAAGCTTTTTaGCAGTGGGCTGTACTAAGGAAAATAAGACAATCC | + |
|
Preference number: 3 (lower is better) Translates to: VIHPDLTSEEAF*QWAVLRKIRQS Trigger: GGATTGTCTTATTTTCCTTAGTACAGCCCACTGCCAAAAAGCTTCCTCTGATGTCAAATCAGGATGTATTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
||
| 3UTR-3UTR CAA 90 bp | CTGCTAGTTAACAGTTCTCTCCTTTGTCTCCTGGCTGTCAATGTAATTTCAAAGTCTCTTTTCCCCAGCTaGTATTATTTCTTGGTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: LLVNSSLLCLLAVNVISKSLFPS*YYFLVS Trigger: AGAAACCAAGAAATAATACAAGCTGGGGAAAAGAGA...CTTTGAAATTACATTGACAGCCAGGAGACAAAGGAGAGAACTGTTAACTAGCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
||
| 3UTR TCA 72 bp | AACAAGACACAGTCTTATAAATTGTTAAGCGGACCCTaGACTATAAGTAGCTTAAGCAGGCTTGAATTTGAG | + |
|
Preference number: 3 (lower is better) Translates to: NKTQSYKLLSGP*TISSLSRLEFE Trigger: CTCAAATTCAAGCCTGCTTAAGCTACTTATAGTTCAGGGTCCGCTTAACAATTTATAAGACTGTGTCTTGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
||
| 3UTR TCA 72 bp | TGCTACTTCACAATTAATTTTGCTACTGTTTTGAGTTaGGCTAGAGGTTTGACAAAGGAGTTGCAACTCACA | + |
|
Preference number: 3 (lower is better) Translates to: CYFTINFATVLS*ARGLTKELQLT Trigger: TGTGAGTTGCAACTCCTTTGTCAAACCTCTAGCTCAACTCAAAACAGTAGCAAAATTAATTGTGAAGTAGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
||
| CDS-3UTR CCA 90 bp | AATCTCAGACTTGGAGCCCCATCCCATCCAGCCTCGAAGTGGATGGGGCACATGGTGGAGCACAGGAGGTaGCGGTTCCCAGGAGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: NLRLGAPSHPASKWMGHMVEHRR*RFPGAK Trigger: CTTGGCTCCTGGGAACCGCCACCTCCTGTGCTCCAC...CATGTGCCCCATCCACTTCGAGGCTGGATGGGATGGGGCTCCAAGTCTGAGATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
||
| CDS-3UTR TCA 90 bp | AATCTCAGACTTGGAGCCCCATCCCATCCAGCCTCGAAGTGGATGGGGCACATGTTTTCTCTGTGCCGGTaGCACTGCCTCCTGGCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: NLRLGAPSHPASKWMGHMFSLCR*HCLLAR Trigger: CCGAGCCAGGAGGCAGTGTCACCGGCACAGAGAAAA...CATGTGCCCCATCCACTTCGAGGCTGGATGGGATGGGGCTCCAAGTCTGAGATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
||
| 3UTR CAA 72 bp | TGGCTGCTGGGTAGAGGCCTGAGAGCGGGGCTAGGTTaGGAAGATCCGTGGCTGTGGGTAGGAGCAGTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: WLLGRGLRAGLG*EDPWLWVGAVL Trigger: TAAAACTGCTCCTACCCACAGCCACGGATCTTCCAAACCTAGCCCCGCTCTCAGGCCTCTACCCAGCAGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
||
| 3UTR CAA 72 bp | TCCAGCCTCGAAGTGGATGGGGCACATGACAAGTTCTaGGCCTGCTTTCCCCACAGCAAGTGCTGCGAATGT | + |
|
Preference number: 4 (lower is better) Translates to: SSLEVDGAHDKF*ACFPHSKCCEC Trigger: ACATTCGCAGCACTTGCTGTGGGGAAAGCAGGCCAAGAACTTGTCATGTGCCCCATCCACTTCGAGGCTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
||
| 3UTR CAA 72 bp | CTTCGTGGAGGAGGAAGCCTCAGTTTGAGTCTCTGCTaGACTTTCTATTCCAACCTCCCTCTACACCAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: LRGGGSLSLSLC*TFYSNLPLHQR Trigger: CCGCTGGTGTAGAGGGAGGTTGGAATAGAAAGTCAAGCAGAGACTCAAACTGAGGCTTCCTCCTCCACGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
||
| CDS-3UTR GCA 90 bp | AATCTCAGACTTGGAGCCCCATCCCATCCAGCCTCGAAGTGGATGGGGCACATGTTGCAGACATGTCTATaGCACTGGAAACAACTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: NLRLGAPSHPASKWMGHMLQTCL*HWKQLC Trigger: ACACAGTTGTTTCCAGTGGCATAGACATGTCTGCAA...CATGTGCCCCATCCACTTCGAGGCTGGATGGGATGGGGCTCCAAGTCTGAGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
||
| 3UTR CAA 72 bp | CAAACCATATTGCCTAGTATCAATGAAATCTCAGACTaGGAGCCCCATCCCATCCAGCCTCGAAGTGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: QTILPSINEISD*EPHPIQPRSGW Trigger: CCATCCACTTCGAGGCTGGATGGGATGGGGCTCCAAGTCTGAGATTTCATTGATACTAGGCAATATGGTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
||
| 3UTR CAA 72 bp | CTCCAGGTGCCTGCCCTCCCTGTGTTTGATGAAGTGTaGTATGGAACCGTGAGTTTGGTCATTTTGTTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LQVPALPVFDEV*YGTVSLVILFH Trigger: ATGAAACAAAATGACCAAACTCACGGTTCCATACAACACTTCATCAAACACAGGGAGGGCAGGCACCTGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
||
| 3UTR CAA 72 bp | GGCCTGGAGCATCTTGGCTCAGCTATGTGGATGTCCTaGGAATCAGTTTCGGTAATACATCCTGATTTGACA | + |
|
Preference number: 4 (lower is better) Translates to: GLEHLGSAMWMS*ESVSVIHPDLT Trigger: TGTCAAATCAGGATGTATTACCGAAACTGATTCCAAGGACATCCACATAGCTGAGCCAAGATGCTCCAGGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
||
| CDS-3UTR GCA 90 bp | TTGGTAGAGAGAGAACCAGTTTCACGGGTTCCCGAGGAATGCTGTCTTTATCTGAAGTTTAAGCAGGATTaGAGACATGTCTATGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: LVEREPVSRVPEECCLYLKFKQD*RHVYAT Trigger: AGTGGCATAGACATGTCTGCAATCCTGCTTAAACTT...CAGATAAAGACAGCATTCCTCGGGAACCCGTGAAACTGGTTCTCTCTCTACCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
||
| CDS-3UTR GCA 90 bp | CAATCCCACTTCAGAGATCTCACAATGGAGAATTTGTCTCACAAAAACTCCTTTCCACGAATGTGCTGGTaGCTGCTGCCATTTTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: QSHFRDLTMENLSHKNSFPRMCW*LLPFWT Trigger: AGTCCAAAATGGCAGCAGGCACCAGCACATTCGTGG...AAAGGAGTTTTTGTGAGACAAATTCTCCATTGTGAGATCTCTGAAGTGGGATTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
||
| CDS-3UTR CCA 90 bp | CAATCCCACTTCAGAGATCTCACAATGGAGAATTTGTCTCACAAAAACTCCTTTACGGCCCCGTACTCTTaGAAAACCTTCTTCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QSHFRDLTMENLSHKNSFTAPYS*KTFFSC Trigger: GCAGCTGAAGAAGGTTTTCCAAGAGTACGGGGCCGT...AAAGGAGTTTTTGTGAGACAAATTCTCCATTGTGAGATCTCTGAAGTGGGATTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
||
| 3UTR CAA 72 bp | TACCACCAGGCCTGGCTGTCAACTCATTTTGATGCCTaGGTGACATTTTTAAGTCATGTACATGAGGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: YHQAWLSTHFDA*VTFLSHVHEEQ Trigger: CTGTTCCTCATGTACATGACTTAAAAATGTCACCAAGGCATCAAAATGAGTTGACAGCCAGGCCTGGTGGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
||
| 3UTR CAA 72 bp | TCTAAGGTTCCCCAGAATATGGGCATCAGGAGCCCATaGACAACATCACAATTGGGCAGTGTTTCTGTATTT | + |
|
Preference number: 4 (lower is better) Translates to: SKVPQNMGIRSP*TTSQLGSVSVF Trigger: AAATACAGAAACACTGCCCAATTGTGATGTTGTCAATGGGCTCCTGATGCCCATATTCTGGGGAACCTTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
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| CDS-3UTR GCA 90 bp | AGCTCTATAAAATGCATTCTGCTAGTTAACAGTTCTCTCCTTTGTCTCCTGGCTTCAGCTGCTGTGTTCTaGTTAGCTTTTTCTCTGTGC | + |
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Preference number: 4 (lower is better) Translates to: SSIKCILLVNSSLLCLLASAAVF*LAFSLC Trigger: GCACAGAGAAAAAGCTAAGCAGAACACAGCAGCTGA...AGCCAGGAGACAAAGGAGAGAACTGTTAACTAGCAGAATGCATTTTATAGAGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
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| CDS-3UTR CCA 90 bp | TATGGAACCGTGAGTTTGGTCATTTTGTTTCATCACAGCAATAGGACCCTAATTTCAAGGCTTGGTGGCTaGAGGTTTAAAGAGTCCAAC | + |
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Preference number: 4 (lower is better) Translates to: YGTVSLVILFHHSNRTLISRLGG*RFKESN Trigger: GTTGGACTCTTTAAACCTCCAGCCACCAAGCCTTGA...AATTAGGGTCCTATTGCTGTGATGAAACAAAATGACCAAACTCACGGTTCCATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
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| 3UTR CAA 72 bp | CCTGTGTTTGATGAAGTGTTGTATGGAACCGTGAGTTaGGTCATTTTGTTTCATCACAGCAATAGGACCCTA | + |
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Preference number: 4 (lower is better) Translates to: PVFDEVLYGTVS*VILFHHSNRTL Trigger: TAGGGTCCTATTGCTGTGATGAAACAAAATGACCAAACTCACGGTTCCATACAACACTTCATCAAACACAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
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| 3UTR CAA 72 bp | GGGAGAACTATAGATGTATGGTTATACTTCGTATGGTaGCGGGGAGGTTCTTATTATAGACATGAGAACAGC | + |
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Preference number: 4 (lower is better) Translates to: GRTIDVWLYFVW*RGGSYYRHENS Trigger: GCTGTTCTCATGTCTATAATAAGAACCTCCCCGCAACCATACGAAGTATAACCATACATCTATAGTTCTCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
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| 3UTR CAA 72 bp | ACAATTGGGCAGTGTTTCTGTATTTTACAAACCATATaGCCTAGTATCAATGAAATCTCAGACTTGGAGCCC | + |
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Preference number: 4 (lower is better) Translates to: TIGQCFCILQTI*PSINEISDLEP Trigger: GGGCTCCAAGTCTGAGATTTCATTGATACTAGGCAATATGGTTTGTAAAATACAGAAACACTGCCCAATTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
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| CDS CCA 90 bp | GTGCCGGTGACACTGCCTCCTGGCTCGGGGGTCCTGTTGGGCTCCTaGCGGCTGAGACAGTCCCCGCGGGCCGTGCGCAGCAGTCGGGCG | + |
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Preference number: 5 (lower is better) Translates to: VPVTLPPGSGVLLGS*RLRQSPRAVRSSRA Trigger: CGCCCGACTGCTGCGCACGGCCCGCGGGGACTGTCTCAGCCGCCAGGAGCCCAACAGGACCCCCGAGCCAGGAGGCAGTGTCACCGGCAC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
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| CDS CCA 90 bp | CCGGATGGGACAAGGCTAAGGCCCAGAGCGGTGGAGCACAGGAGGTaGCGGTTCCCAGGAGCCAAGGGGCCAGGGGCCGCAGCCGGGTGC | + |
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Preference number: 5 (lower is better) Translates to: PDGTRLRPRAVEHRR*RFPGAKGPGAAAGC Trigger: GCACCCGGCTGCGGCCCCTGGCCCCTTGGCTCCTGGGAACCGCCACCTCCTGTGCTCCACCGCTCTGGGCCTTAGCCTTGTCCCATCCGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
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| CDS CCA 90 bp | CAGTCCCCGCGGGCCGTGCGCAGCAGTCGGGCGTCCGGAACCGGATaGGACAAGGCTAAGGCCCAGAGCGGTGGAGCACAGGAGGTGGCG | + |
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Preference number: 5 (lower is better) Translates to: QSPRAVRSSRASGTG*DKAKAQSGGAQEVA Trigger: CGCCACCTCCTGTGCTCCACCGCTCTGGGCCTTAGCCTTGTCCCATCCGGTTCCGGACGCCCGACTGCTGCGCACGGCCCGCGGGGACTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
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| CDS-3UTR CAA 90 bp | CCAGAATATGGGCATCAGGAGCCCATTGACAACATCACAATTGGGCAGTGTTTCGGCTCGGGGGTCCTGTaGGGCTCCTGGCGGCTGAGA | + |
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Preference number: 5 (lower is better) Translates to: PEYGHQEPIDNITIGQCFGSGVL*GSWRLR Trigger: TCTCAGCCGCCAGGAGCCCAACAGGACCCCCGAGCC...GAAACACTGCCCAATTGTGATGTTGTCAATGGGCTCCTGATGCCCATATTCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
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| CDS-3UTR CAA 90 bp | GTGCGCCTTGCTGGCTTATACGGTGCTTTAGTTGCTTCACCTCAACTCTTGCTGCACGGCCCCGTACTCTaGGAAAACCTTCTTCAGCTG | + |
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Preference number: 5 (lower is better) Translates to: VRLAGLYGALVASPQLLLHGPVL*ENLLQL Trigger: CAGCTGAAGAAGGTTTTCCAAGAGTACGGGGCCGTG...CAGCAAGAGTTGAGGTGAAGCAACTAAAGCACCGTATAAGCCAGCAAGGCGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
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| CDS CCA 72 bp | ACACTGCCTCCTGGCTCGGGGGTCCTGTTGGGCTCCTaGCGGCTGAGACAGTCCCCGCGGGCCGTGCGCAGC | + |
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Preference number: 6 (lower is better) Translates to: TLPPGSGVLLGS*RLRQSPRAVRS Trigger: GCTGCGCACGGCCCGCGGGGACTGTCTCAGCCGCCAGGAGCCCAACAGGACCCCCGAGCCAGGAGGCAGTGT 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
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| CDS CCA 72 bp | ACAAGGCTAAGGCCCAGAGCGGTGGAGCACAGGAGGTaGCGGTTCCCAGGAGCCAAGGGGCCAGGGGCCGCA | + |
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Preference number: 6 (lower is better) Translates to: TRLRPRAVEHRR*RFPGAKGPGAA Trigger: TGCGGCCCCTGGCCCCTTGGCTCCTGGGAACCGCCACCTCCTGTGCTCCACCGCTCTGGGCCTTAGCCTTGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028995.5 |
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