Pregenerated sensors for FAM210A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038121Ensembl transcript IDs: ENSMUST00000042852.7, ENSMUST00000152193.2
Found 175 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CGAGCCCCAGAGCAGGAAGCCAGGACTCCAGTTCACAATGGAGAGTaGCTTGTGGGACTATCTTCTGCCCAGGTTCCCTGGCTGAGGACC | + |
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Preference number: 1 (lower is better) Translates to: RAPEQEARTPVHNGE*LVGLSSAQVPWLRT Trigger: GGTCCTCAGCCAGGGAACCTGGGCAGAAGATAGTCCCACAAGGCACTCTCCATTGTGAACTGGAGTCCTGGCTTCCTGCTCTGGGGCTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| 3UTR TCA 90 bp | GGCCACTTAAGGCAGGGGCAGCCCACCAGATCCTCAGTGTCCACATaGAGTGACAACTGCTGGCCAATGAGGGCCCATCATTCTTGCTCT | + |
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Preference number: 1 (lower is better) Translates to: GHLRQGQPTRSSVST*SDNCWPMRAHHSCS Trigger: AGAGCAAGAATGATGGGCCCTCATTGGCCAGCAGTTGTCACTTCATGTGGACACTGAGGATCTGGTGGGCTGCCCCTGCCTTAAGTGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| 3UTR GCA 90 bp | TGCACACGCACACACATGTGTGCCTGTGTCAGAGCTCACGTGTGGTaGGGGCAATCTGCTGGAGTCAGGTCTGTCTACCACATGAGTTCC | + |
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Preference number: 1 (lower is better) Translates to: CTRTHMCACVRAHVW*GQSAGVRSVYHMSS Trigger: GGAACTCATGTGGTAGACAGACCTGACTCCAGCAGATTGCCCGCACCACACGTGAGCTCTGACACAGGCACACATGTGTGTGCGTGTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| 3UTR CCA 90 bp | GTCTGCACACGCACACACATGTGTGCCTGTGTCAGAGCTCACGTGTaGTGCGGGCAATCTGCTGGAGTCAGGTCTGTCTACCACATGAGT | + |
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Preference number: 1 (lower is better) Translates to: VCTRTHMCACVRAHV*CGQSAGVRSVYHMS Trigger: ACTCATGTGGTAGACAGACCTGACTCCAGCAGATTGCCCGCACCACACGTGAGCTCTGACACAGGCACACATGTGTGTGCGTGTGCAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| 3UTR TCA 90 bp | CTTAAGGCAGGGGCAGCCCACCAGATCCTCAGTGTCCACATGAAGTaGCAACTGCTGGCCAATGAGGGCCCATCATTCTTGCTCTCCAAC | + |
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Preference number: 1 (lower is better) Translates to: LKAGAAHQILSVHMK*QLLANEGPSFLLSN Trigger: GTTGGAGAGCAAGAATGATGGGCCCTCATTGGCCAGCAGTTGTCACTTCATGTGGACACTGAGGATCTGGTGGGCTGCCCCTGCCTTAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| 3UTR GCA 90 bp | GCTTTAAAATATTGGTCTGAGTGTCTGCACACGCACACACATGTGTaGCTGTGTCAGAGCTCACGTGTGGTGCGGGCAATCTGCTGGAGT | + |
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Preference number: 1 (lower is better) Translates to: ALKYWSECLHTHTHV*LCQSSRVVRAICWS Trigger: ACTCCAGCAGATTGCCCGCACCACACGTGAGCTCTGACACAGGCACACATGTGTGTGCGTGTGCAGACACTCAGACCAATATTTTAAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| 3UTR CCA 90 bp | TCTCAGGTGGCTTCAAGTATGCTACTGACAGAGCTTCAGACACCATaGCCACTGTCTGGTATTACGCATGGGCAGGAAGAAGATGATGGC | + |
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Preference number: 1 (lower is better) Translates to: SQVASSMLLTELQTP*PLSGITHGQEEDDG Trigger: GCCATCATCTTCTTCCTGCCCATGCGTAATACCAGACAGTGGCCATGGTGTCTGAAGCTCTGTCAGTAGCATACTTGAAGCCACCTGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| 3UTR TCA 90 bp | CATGGGCCAATGGAGACCAAGCACAGTTACTATTTGAAGAATACGTaGCACCCTTCTCACTGCTTCTCCTGCCCCTGTTCTGCAAATTTC | + |
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Preference number: 1 (lower is better) Translates to: HGPMETKHSYYLKNT*HPSHCFSCPCSANF Trigger: GAAATTTGCAGAACAGGGGCAGGAGAAGCAGTGAGAAGGGTGTCACGTATTCTTCAAATAGTAACTGTGCTTGGTCTCCATTGGCCCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| 3UTR TCA 90 bp | GATGCTGCGGATCATTCCCTAATTACTGGCTTTAAAATATTGGTCTaGGTGTCTGCACACGCACACACATGTGTGCCTGTGTCAGAGCTC | + |
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Preference number: 1 (lower is better) Translates to: DAADHSLITGFKILV*VSAHAHTCVPVSEL Trigger: GAGCTCTGACACAGGCACACATGTGTGTGCGTGTGCAGACACTCAGACCAATATTTTAAAGCCAGTAATTAGGGAATGATCCGCAGCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| 3UTR TCA 90 bp | AATACCATACACATGGGCCAATGGAGACCAAGCACAGTTACTATTTaGAGAATACGTGACACCCTTCTCACTGCTTCTCCTGCCCCTGTT | + |
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Preference number: 1 (lower is better) Translates to: NTIHMGQWRPSTVTI*RIRDTLLTASPAPV Trigger: AACAGGGGCAGGAGAAGCAGTGAGAAGGGTGTCACGTATTCTTCAAATAGTAACTGTGCTTGGTCTCCATTGGCCCATGTGTATGGTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| 3UTR GCA 90 bp | CAAGGGTTAGACCTGAAGGAAAGACACACAAACAGAAAGACACTCTaGAGTCATCGGACTTGCTTGACAGTCGTTGAATTACAAGCAGTG | + |
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Preference number: 1 (lower is better) Translates to: QGLDLKERHTNRKTL*SHRTCLTVVELQAV Trigger: CACTGCTTGTAATTCAACGACTGTCAAGCAAGTCCGATGACTGCAGAGTGTCTTTCTGTTTGTGTGTCTTTCCTTCAGGTCTAACCCTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| 3UTR GCA 90 bp | AGCAGGCTCCAGTGTGCTGCCATGTTTATATTGTATTTGAAAGTGTaGCGTCTGTTTATAGCAGTTCACTCAGTGACCTCTACCTCAGAT | + |
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Preference number: 1 (lower is better) Translates to: SRLQCAAMFILYLKV*RLFIAVHSVTSTSD Trigger: ATCTGAGGTAGAGGTCACTGAGTGAACTGCTATAAACAGACGGCACACTTTCAAATACAATATAAACATGGCAGCACACTGGAGCCTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| 3UTR TCA 90 bp | CAATTAAATGGAAAAATAAGTCTCAGGTGGCTTCAAGTATGCTACTaGCAGAGCTTCAGACACCATGGCCACTGTCTGGTATTACGCATG | + |
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Preference number: 1 (lower is better) Translates to: QLNGKISLRWLQVCY*QSFRHHGHCLVLRM Trigger: CATGCGTAATACCAGACAGTGGCCATGGTGTCTGAAGCTCTGTCAGTAGCATACTTGAAGCCACCTGAGACTTATTTTTCCATTTAATTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| 3UTR TCA 90 bp | TGGTGGCTTCAAAGGGAACATGTGAACACACCAGCATTTAGAACCTaGCTATTTAATAAGCAGGCTCCAGTGTGCTGCCATGTTTATATT | + |
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Preference number: 1 (lower is better) Translates to: WWLQREHVNTPAFRT*LFNKQAPVCCHVYI Trigger: AATATAAACATGGCAGCACACTGGAGCCTGCTTATTAAATAGTCAGGTTCTAAATGCTGGTGTGTTCACATGTTCCCTTTGAAGCCACCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| 3UTR GCA 90 bp | AAGCAAATAAATACAGGGCCTCTCGTCACCAGTAAAACCACACTATaGTCTGAGAGAATTTCTCAATTCAGCAGTTCATTGGAGACACTG | + |
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Preference number: 1 (lower is better) Translates to: KQINTGPLVTSKTTL*SERISQFSSSLETL Trigger: CAGTGTCTCCAATGAACTGCTGAATTGAGAAATTCTCTCAGAGCATAGTGTGGTTTTACTGGTGACGAGAGGCCCTGTATTTATTTGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| 3UTR GCA 90 bp | AAGGAAAGACACACAAACAGAAAGACACTCTGCAGTCATCGGACTTaGTTGACAGTCGTTGAATTACAAGCAGTGAGCTTTTTGCTATAT | + |
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Preference number: 1 (lower is better) Translates to: KERHTNRKTLCSHRT*LTVVELQAVSFLLY Trigger: ATATAGCAAAAAGCTCACTGCTTGTAATTCAACGACTGTCAAGCAAGTCCGATGACTGCAGAGTGTCTTTCTGTTTGTGTGTCTTTCCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| 3UTR CCA 90 bp | AACGTAGCTCTTTCCTCTGTAAAGATGATGGAGGAGGATTTACAATaGAGAACTCGGGGGAATATACTGGAAGGCTTAGTTTTATTGTTC | + |
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Preference number: 1 (lower is better) Translates to: NVALSSVKMMEEDLQ*RTRGNILEGLVLLF Trigger: GAACAATAAAACTAAGCCTTCCAGTATATTCCCCCGAGTTCTCCATTGTAAATCCTCCTCCATCATCTTTACAGAGGAAAGAGCTACGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| 3UTR CCA 90 bp | AGTTTCCAATGGCTTCTGGTGTTCTTGCAATTGGCAGCAATTAAATaGAAAAATAAGTCTCAGGTGGCTTCAAGTATGCTACTGACAGAG | + |
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Preference number: 1 (lower is better) Translates to: SFQWLLVFLQLAAIK*KNKSQVASSMLLTE Trigger: CTCTGTCAGTAGCATACTTGAAGCCACCTGAGACTTATTTTTCCATTTAATTGCTGCCAATTGCAAGAACACCAGAAGCCATTGGAAACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| 3UTR TCA 90 bp | TTTTCAAAGCTCAATCCTGGAGACACAGGAGATATCAACTTGTTTTaGCTGGTTAGAATGAACAAAGGACACAGACGTCACAAAGGGAAA | + |
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Preference number: 1 (lower is better) Translates to: FSKLNPGDTGDINLF*LVRMNKGHRRHKGK Trigger: TTTCCCTTTGTGACGTCTGTGTCCTTTGTTCATTCTAACCAGTCAAAACAAGTTGATATCTCCTGTGTCTCCAGGATTGAGCTTTGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| 3UTR TCA 90 bp | ACCTGTTCAACAAACACTGCATCAGGTTTTGTGGACATATTTGTTTaGCAGTACTTTTTACTTTGGGCTAATGCATACCTGTCTGTTACT | + |
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Preference number: 1 (lower is better) Translates to: TCSTNTASGFVDIFV*QYFLLWANAYLSVT Trigger: AGTAACAGACAGGTATGCATTAGCCCAAAGTAAAAAGTACTGTCAAACAAATATGTCCACAAAACCTGATGCAGTGTTTGTTGAACAGGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| 3UTR GCA 90 bp | GCAAAAAGAACTCTGATTTCTAGGACATCAACTACTGCTTATTGCTaGATCTCATATAAATGCTGTATGCTGGGTTCATTTCCTCATTTT | + |
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Preference number: 1 (lower is better) Translates to: AKRTLISRTSTTAYC*ISYKCCMLGSFPHF Trigger: AAAATGAGGAAATGAACCCAGCATACAGCATTTATATGAGATGCAGCAATAAGCAGTAGTTGATGTCCTAGAAATCAGAGTTCTTTTTGC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| 3UTR CCA 90 bp | TTCTTCCAACCCAGAAAGACTTCAACCAAAGCATTTTTACTTCAATaGTGTTTCAATATAATGACTGAGTGCCTCAAGTGTGAAGTTATT | + |
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Preference number: 1 (lower is better) Translates to: FFQPRKTSTKAFLLQ*CFNIMTECLKCEVI Trigger: AATAACTTCACACTTGAGGCACTCAGTCATTATATTGAAACACCATTGAAGTAAAAATGCTTTGGTTGAAGTCTTTCTGGGTTGGAAGAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| 3UTR-3UTR GCA 90 bp | ATGGGCAGTGATTCTCCACTGTCATCCACCTGCATCTTTTGCCCCGGCGGCGATGCTCTCCCTCCCCTCTaGCACTGGTACTCAGCACTG | + |
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Preference number: 2 (lower is better) Translates to: MGSDSPLSSTCIFCPGGDALPPL*HWYSAL Trigger: CAGTGCTGAGTACCAGTGGCAGAGGGGAGGGAGAGC...ATCGCCGCCGGGGCAAAAGATGCAGGTGGATGACAGTGGAGAATCACTGCCCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| 3UTR CAA 90 bp | ACACAGCAAAGAGCAGCTCGGACCTTGGGCTCGGCAGGCTTTAGCTaGTTCAAGAGCTCACCTCAGATAACCAATGTCCCGGGCTGGAGG | + |
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Preference number: 2 (lower is better) Translates to: TQQRAARTLGSAGFS*FKSSPQITNVPGWR Trigger: CCTCCAGCCCGGGACATTGGTTATCTGAGGTGAGCTCTTGAACAAGCTAAAGCCTGCCGAGCCCAAGGTCCGAGCTGCTCTTTGCTGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| 3UTR-3UTR TCA 90 bp | AGCGTGCTAAGTAGGCCTGTCAACAAACGCTCCCTGATGGTGGAGGCTTTCAGCGGTCTTAGAAACCAATaGGCCACACGGTGCTCCTCC | + |
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Preference number: 2 (lower is better) Translates to: SVLSRPVNKRSLMVEAFSGLRNQ*ATRCSS Trigger: GGAGGAGCACCGTGTGGCTCATTGGTTTCTAAGACC...GCTGAAAGCCTCCACCATCAGGGAGCGTTTGTTGACAGGCCTACTTAGCACGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| 3UTR-3UTR TCA 90 bp | GCCACACATGGTCTTCTGGGTGCAGGACCTGTGGATGTTGTCGCTATACACAAGATGATGGCCTCGTCTTaGACCAAGGAGACACTGAGG | + |
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Preference number: 2 (lower is better) Translates to: ATHGLLGAGPVDVVAIHKMMASS*TKETLR Trigger: CCTCAGTGTCTCCTTGGTTCAAGACGAGGCCATCAT...CTTGTGTATAGCGACAACATCCACAGGTCCTGCACCCAGAAGACCATGTGTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| 3UTR-3UTR TCA 90 bp | GCCACACATGGTCTTCTGGGTGCAGGACCTGTGGATGTTGTCGCTATACACAAGATGTGGCATGGGCTCTaGCATTCTCCTGATGCTAAG | + |
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Preference number: 2 (lower is better) Translates to: ATHGLLGAGPVDVVAIHKMWHGL*HSPDAK Trigger: CTTAGCATCAGGAGAATGTCAGAGCCCATGCCACAT...CTTGTGTATAGCGACAACATCCACAGGTCCTGCACCCAGAAGACCATGTGTGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| 3UTR CAA 90 bp | CTGTCTGGTATTACGCATGGGCAGGAAGAAGATGATGGCCTCGTCTaGAACCAAGGAGACACTGAGGACTTCTTGAGGCCAAACGCTCTA | + |
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Preference number: 2 (lower is better) Translates to: LSGITHGQEEDDGLV*NQGDTEDFLRPNAL Trigger: TAGAGCGTTTGGCCTCAAGAAGTCCTCAGTGTCTCCTTGGTTCAAGACGAGGCCATCATCTTCTTCCTGCCCATGCGTAATACCAGACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| 3UTR-3UTR GCA 90 bp | ATGGGCAGTGATTCTCCACTGTCATCCACCTGCATCTTTTGCCCCGGCGGCGATCAGCATTTCCTCATCTaGTTTAACTGGGTACACATG | + |
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Preference number: 2 (lower is better) Translates to: MGSDSPLSSTCIFCPGGDQHFLI*FNWVHM Trigger: CATGTGTACCCAGTTAAAGCAGATGAGGAAATGCTG...ATCGCCGCCGGGGCAAAAGATGCAGGTGGATGACAGTGGAGAATCACTGCCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| 3UTR-3UTR GCA 90 bp | GCCACACATGGTCTTCTGGGTGCAGGACCTGTGGATGTTGTCGCTATACACAAGTCTCACTGCTTCTCCTaGCCCTGTTCTGCAAATTTC | + |
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Preference number: 2 (lower is better) Translates to: ATHGLLGAGPVDVVAIHKSHCFS*PCSANF Trigger: GAAATTTGCAGAACAGGGGCAGGAGAAGCAGTGAGA...CTTGTGTATAGCGACAACATCCACAGGTCCTGCACCCAGAAGACCATGTGTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| 3UTR-3UTR CCA 90 bp | CCCTTCTCACTGCTTCTCCTGCCCCTGTTCTGCAAATTTCCAACTCCAAGACCCAAAGCAGGGACTGAATaGGATAGCAATGTGGCATGG | + |
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Preference number: 2 (lower is better) Translates to: PFSLLLLPLFCKFPTPRPKAGTE*DSNVAW Trigger: CCATGCCACATTGCTATCCCATTCAGTCCCTGCTTT...GGGTCTTGGAGTTGGAAATTTGCAGAACAGGGGCAGGAGAAGCAGTGAGAAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| 3UTR-3UTR CCA 90 bp | AAACAAAACCCAACCCAGGTTCTCAGTTGCTTCAGGAAAAGCAGGAGGATGCCACCACACATGGTCTTCTaGGTGCAGGACCTGTGGATG | + |
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Preference number: 2 (lower is better) Translates to: KQNPTQVLSCFRKSRRMPPHMVF*VQDLWM Trigger: CATCCACAGGTCCTGCACCCAGAAGACCATGTGTGG...TGGCATCCTCCTGCTTTTCCTGAAGCAACTGAGAACCTGGGTTGGGTTTTGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| 3UTR CAA 90 bp | TACCACCCTCGAGCATCCATCTCCTCCACATTCCGTTACAGACTTTaGCTCCTACCAAAATCAGCAGCGGTCTTGCAAAGCTTGATGCAG | + |
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Preference number: 2 (lower is better) Translates to: YHPRASISSTFRYRL*LLPKSAAVLQSLMQ Trigger: CTGCATCAAGCTTTGCAAGACCGCTGCTGATTTTGGTAGGAGCAAAAGTCTGTAACGGAATGTGGAGGAGATGGATGCTCGAGGGTGGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| 3UTR-3UTR TCA 90 bp | GATGATGGCCTCGTCTTGAACCAAGGAGACACTGAGGACTTCTTGAGGCCAAACGGCCAAAGTTCATGGTaGAAGAGGGATTCTGGGAAA | + |
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Preference number: 2 (lower is better) Translates to: DDGLVLNQGDTEDFLRPNGQSSW*KRDSGK Trigger: TTTCCCAGAATCCCTCTTTCACCATGAACTTTGGCC...GTTTGGCCTCAAGAAGTCCTCAGTGTCTCCTTGGTTCAAGACGAGGCCATCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| 3UTR-3UTR TCA 90 bp | GGACATGCTATTTGCCACAAAATCTTTGGCAATGGGGTTCTGAGGTGGCTTGGTCAGAGAAAACAGCAATaGTCCCCATGGCTCACTCCC | + |
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Preference number: 2 (lower is better) Translates to: GHAICHKIFGNGVLRWLGQRKQQ*SPWLTP Trigger: GGGAGTGAGCCATGGGGATCATTGCTGTTTTCTCTG...ACCAAGCCACCTCAGAACCCCATTGCCAAAGATTTTGTGGCAAATAGCATGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| 3UTR-3UTR CCA 90 bp | CTCACTGCTTCTCCTGCCCCTGTTCTGCAAATTTCCAACTCCAAGACCCACACAATGCCAACAACTGAATaGTGTGCAGGAAGGGCACTT | + |
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Preference number: 2 (lower is better) Translates to: LTASPAPVLQISNSKTHTMPTTE*CAGRAL Trigger: AAGTGCCCTTCCTGCACACCATTCAGTTGTTGGCAT...TGTGTGGGTCTTGGAGTTGGAAATTTGCAGAACAGGGGCAGGAGAAGCAGTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| 3UTR CAA 90 bp | GGTTTTATAAATACTTCCCACACACAGCAAAGAGCAGCTCGGACCTaGGGCTCGGCAGGCTTTAGCTTGTTCAAGAGCTCACCTCAGATA | + |
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Preference number: 2 (lower is better) Translates to: GFINTSHTQQRAART*GSAGFSLFKSSPQI Trigger: TATCTGAGGTGAGCTCTTGAACAAGCTAAAGCCTGCCGAGCCCAAGGTCCGAGCTGCTCTTTGCTGTGTGTGGGAAGTATTTATAAAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| 3UTR CAA 90 bp | ACGCTCCCTGATGGTGGAGGCTTTCAGCTGTGCTGTGACCTACACTaGAGAGTATTGATATATGCTCCGGGTAATCGTACAGATTGCAGA | + |
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Preference number: 2 (lower is better) Translates to: TLPDGGGFQLCCDLH*RVLIYAPGNRTDCR Trigger: TCTGCAATCTGTACGATTACCCGGAGCATATATCAATACTCTCAAGTGTAGGTCACAGCACAGCTGAAAGCCTCCACCATCAGGGAGCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| 3UTR-3UTR TCA 90 bp | CTCACTGCTTCTCCTGCCCCTGTTCTGCAAATTTCCAACTCCAAGACCCACACACTAGGCAGAAGGTACTaGCTTAGGACAAGAAAGTTG | + |
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Preference number: 2 (lower is better) Translates to: LTASPAPVLQISNSKTHTLGRRY*LRTRKL Trigger: CAACTTTCTTGTCCTAAGTCAGTACCTTCTGCCTAG...TGTGTGGGTCTTGGAGTTGGAAATTTGCAGAACAGGGGCAGGAGAAGCAGTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| 3UTR-3UTR TCA 90 bp | AAACAAAACCCAACCCAGGTTCTCAGTTGCTTCAGGAAAAGCAGGAGGATGCCAACAGAAACAAGGAACTaGCCAGCTCTTTCCCCTGAG | + |
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Preference number: 2 (lower is better) Translates to: KQNPTQVLSCFRKSRRMPTETRN*PALSPE Trigger: CTCAGGGGAAAGAGCTGGTCAGTTCCTTGTTTCTGT...TGGCATCCTCCTGCTTTTCCTGAAGCAACTGAGAACCTGGGTTGGGTTTTGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| 3UTR-3UTR TCA 90 bp | AAACAAAACCCAACCCAGGTTCTCAGTTGCTTCAGGAAAAGCAGGAGGATGCCAGGAAAATCAACTCAGTaGGCCTCACTCAGCACTCAC | + |
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Preference number: 2 (lower is better) Translates to: KQNPTQVLSCFRKSRRMPGKSTQ*ASLSTH Trigger: GTGAGTGCTGAGTGAGGCTCACTGAGTTGATTTTCC...TGGCATCCTCCTGCTTTTCCTGAAGCAACTGAGAACCTGGGTTGGGTTTTGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| 3UTR-3UTR GCA 90 bp | AAACAAAACCCAACCCAGGTTCTCAGTTGCTTCAGGAAAAGCAGGAGGATGCCAGTGTCCGCACTAACCTaGCTCTGTTTCTCCAAGGAA | + |
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Preference number: 2 (lower is better) Translates to: KQNPTQVLSCFRKSRRMPVSALT*LCFSKE Trigger: TTCCTTGGAGAAACAGAGGCAGGTTAGTGCGGACAC...TGGCATCCTCCTGCTTTTCCTGAAGCAACTGAGAACCTGGGTTGGGTTTTGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| 3UTR-3UTR TCA 90 bp | TTCAGACAGCAGCTCACACTGGCCTTTGAAAACAGTAATTCATCTCTTGGTGGTAATGTACATGCTGACTaGGGTCCCAGGTCACAGAGC | + |
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Preference number: 2 (lower is better) Translates to: FRQQLTLAFENSNSSLGGNVHAD*GPRSQS Trigger: GCTCTGTGACCTGGGACCTCAGTCAGCATGTACATT...ACCACCAAGAGATGAATTACTGTTTTCAAAGGCCAGTGTGAGCTGCTGTCTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| 3UTR-3UTR GCA 90 bp | AATTTTCCAAAAATACCAGTTTCCAATGGCTTCTGGTGTTCTTGCAATTGGCAGCCTCTGGGAGTGGACTaGCCAGCACAGCCTTACTGC | + |
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Preference number: 2 (lower is better) Translates to: NFPKIPVSNGFWCSCNWQPLGVD*PAQPYC Trigger: GCAGTAAGGCTGTGCTGGGCAGTCCACTCCCAGAGG...CTGCCAATTGCAAGAACACCAGAAGCCATTGGAAACTGGTATTTTTGGAAAATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| 3UTR-3UTR GCA 90 bp | GCCACACATGGTCTTCTGGGTGCAGGACCTGTGGATGTTGTCGCTATACACAAGAAAATCTCCTCTATTTaGAAGGCACAGGAAAAGGTG | + |
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Preference number: 2 (lower is better) Translates to: ATHGLLGAGPVDVVAIHKKISSI*KAQEKV Trigger: CACCTTTTCCTGTGCCTTGCAAATAGAGGAGATTTT...CTTGTGTATAGCGACAACATCCACAGGTCCTGCACCCAGAAGACCATGTGTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| 3UTR-3UTR TCA 90 bp | GATGATGGCCTCGTCTTGAACCAAGGAGACACTGAGGACTTCTTGAGGCCAAACTTCAAAGGGAACATGTaGACACACCAGCATTTAGAA | + |
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Preference number: 2 (lower is better) Translates to: DDGLVLNQGDTEDFLRPNFKGNM*THQHLE Trigger: TTCTAAATGCTGGTGTGTTCACATGTTCCCTTTGAA...GTTTGGCCTCAAGAAGTCCTCAGTGTCTCCTTGGTTCAAGACGAGGCCATCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
||
| 3UTR-3UTR TCA 90 bp | GATGATGGCCTCGTCTTGAACCAAGGAGACACTGAGGACTTCTTGAGGCCAAACGCTATTATGAAATCCTaGAGACTTGCACATGGTTCA | + |
|
Preference number: 2 (lower is better) Translates to: DDGLVLNQGDTEDFLRPNAIMKS*RLAHGS Trigger: TGAACCATGTGCAAGTCTTCAGGATTTCATAATAGC...GTTTGGCCTCAAGAAGTCCTCAGTGTCTCCTTGGTTCAAGACGAGGCCATCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
||
| 3UTR-3UTR GCA 90 bp | AGCGTGCTAAGTAGGCCTGTCAACAAACGCTCCCTGATGGTGGAGGCTTTCAGCCATATAAATGCTGTATaGTGGGTTCATTTCCTCATT | + |
|
Preference number: 2 (lower is better) Translates to: SVLSRPVNKRSLMVEAFSHINAV*WVHFLI Trigger: AATGAGGAAATGAACCCAGCATACAGCATTTATATG...GCTGAAAGCCTCCACCATCAGGGAGCGTTTGTTGACAGGCCTACTTAGCACGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
||
| 3UTR-3UTR TCA 90 bp | GCAAATTTCCAACTCCAAGACCCACACATCCTCACCACACGCTCCTTTGCTAGTCCAGCATTTAGAACCTaGCTATTTAATAAGCAGGCT | + |
|
Preference number: 2 (lower is better) Translates to: ANFQLQDPHILTTRSFASPAFRT*LFNKQA Trigger: AGCCTGCTTATTAAATAGTCAGGTTCTAAATGCTGG...ACTAGCAAAGGAGCGTGTGGTGAGGATGTGTGGGTCTTGGAGTTGGAAATTTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
||
| 3UTR-3UTR TCA 90 bp | TTCAGACAGCAGCTCACACTGGCCTTTGAAAACAGTAATTCATCTCTTGGTGGTCTCAGCACTCACCTGTaGGAAGCTCAGAGTATAAGA | + |
|
Preference number: 2 (lower is better) Translates to: FRQQLTLAFENSNSSLGGLSTHL*EAQSIR Trigger: TCTTATACTCTGAGCTTCTCACAGGTGAGTGCTGAG...ACCACCAAGAGATGAATTACTGTTTTCAAAGGCCAGTGTGAGCTGCTGTCTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
||
| 3UTR-3UTR GCA 90 bp | GCAAATTTCCAACTCCAAGACCCACACATCCTCACCACACGCTCCTTTGCTAGTCAGGCTCCAGTGTGCTaGCATGTTTATATTGTATTT | + |
|
Preference number: 2 (lower is better) Translates to: ANFQLQDPHILTTRSFASQAPVC*HVYIVF Trigger: AAATACAATATAAACATGGCAGCACACTGGAGCCTG...ACTAGCAAAGGAGCGTGTGGTGAGGATGTGTGGGTCTTGGAGTTGGAAATTTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
||
| 3UTR-3UTR CCA 90 bp | TTCAGACAGCAGCTCACACTGGCCTTTGAAAACAGTAATTCATCTCTTGGTGGTGAAACAGAGCAAGACTaGACCTTTTGTCTCTCACCC | + |
|
Preference number: 2 (lower is better) Translates to: FRQQLTLAFENSNSSLGGETEQD*TFCLSP Trigger: GGGTGAGAGACAAAAGGTCCAGTCTTGCTCTGTTTC...ACCACCAAGAGATGAATTACTGTTTTCAAAGGCCAGTGTGAGCTGCTGTCTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
||
| 3UTR-3UTR CCA 90 bp | ACCACACTATGCTCTGAGAGAATTTCTCAATTCAGCAGTTCATTGGAGACACTGGAGCTTCAGACACCATaGCCACTGTCTGGTATTACG | + |
|
Preference number: 2 (lower is better) Translates to: TTLCSERISQFSSSLETLELQTP*PLSGIT Trigger: CGTAATACCAGACAGTGGCCATGGTGTCTGAAGCTC...CAGTGTCTCCAATGAACTGCTGAATTGAGAAATTCTCTCAGAGCATAGTGTGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
||
| 3UTR CAA 90 bp | ACATTCCGTTACAGACTTTTGCTCCTACCAAAATCAGCAGCGGTCTaGCAAAGCTTGATGCAGTTAAACAGTGAACCTGACTTGCTGATG | + |
|
Preference number: 2 (lower is better) Translates to: TFRYRLLLLPKSAAV*QSLMQLNSEPDLLM Trigger: CATCAGCAAGTCAGGTTCACTGTTTAACTGCATCAAGCTTTGCAAGACCGCTGCTGATTTTGGTAGGAGCAAAAGTCTGTAACGGAATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
||
| 3UTR-3UTR TCA 90 bp | GTGCAGATATGGCGAGAGCTAACCGATGTTTATATGAACATGCTGTTACCCTTCTCAAGGCCATTCAAGTaGATCCTCAGAATAAGCCAC | + |
|
Preference number: 2 (lower is better) Translates to: VQIWRELTDVYMNMLLPFSRPFK*ILRISH Trigger: GTGGCTTATTCTGAGGATTCACTTGAATGGCCTTGA...GAAGGGTAACAGCATGTTCATATAAACATCGGTTAGCTCTCGCCATATCTGCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
||
| 3UTR-3UTR GCA 90 bp | CACTGCATCAGGTTTTGTGGACATATTTGTTTGACAGTACTTTTTACTTTGGGCCTCCCTAAGGAGCCATaGTCTGAGACTGAGAGTCCT | + |
|
Preference number: 2 (lower is better) Translates to: HCIRFCGHICLTVLFTLGLPKEP*SETESP Trigger: AGGACTCTCAGTCTCAGAGCATGGCTCCTTAGGGAG...GCCCAAAGTAAAAAGTACTGTCAAACAAATATGTCCACAAAACCTGATGCAGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
||
| 3UTR-3UTR GCA 90 bp | AAACAAAACCCAACCCAGGTTCTCAGTTGCTTCAGGAAAAGCAGGAGGATGCCATGTAACCAACAAAGGTaGTCACCTGTTCAACAAACA | + |
|
Preference number: 2 (lower is better) Translates to: KQNPTQVLSCFRKSRRMPCNQQR*SPVQQT Trigger: TGTTTGTTGAACAGGTGAGCACCTTTGTTGGTTACA...TGGCATCCTCCTGCTTTTCCTGAAGCAACTGAGAACCTGGGTTGGGTTTTGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
||
| 3UTR-3UTR CCA 90 bp | GTGCAGATATGGCGAGAGCTAACCGATGTTTATATGAACATGCTGTTACCCTTCTTTATTGTTCCACTGTaGGAGGCAGCTAATCCCAAC | + |
|
Preference number: 2 (lower is better) Translates to: VQIWRELTDVYMNMLLPFFIVPL*EAANPN Trigger: GTTGGGATTAGCTGCCTCCCACAGTGGAACAATAAA...GAAGGGTAACAGCATGTTCATATAAACATCGGTTAGCTCTCGCCATATCTGCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
||
| 3UTR CAA 90 bp | TACAGACTTTTGCTCCTACCAAAATCAGCAGCGGTCTTGCAAAGCTaGATGCAGTTAAACAGTGAACCTGACTTGCTGATGTATGTGATG | + |
|
Preference number: 2 (lower is better) Translates to: YRLLLLPKSAAVLQS*MQLNSEPDLLMYVM Trigger: CATCACATACATCAGCAAGTCAGGTTCACTGTTTAACTGCATCAAGCTTTGCAAGACCGCTGCTGATTTTGGTAGGAGCAAAAGTCTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
||
| 3UTR-3UTR TCA 90 bp | CACTCACCTGTGAGAAGCTCAGAGTATAAGAGGAAAGTCTCTTTAAAAGGCCAATCATCAGGAAAGACATaGGGTCCAAACTTTCCTGTC | + |
|
Preference number: 2 (lower is better) Translates to: HSPVRSSEYKRKVSLKGQSSGKT*GPNFPV Trigger: GACAGGAAAGTTTGGACCTCATGTCTTTCCTGATGA...TTGGCCTTTTAAAGAGACTTTCCTCTTATACTCTGAGCTTCTCACAGGTGAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| 3UTR-3UTR GCA 90 bp | GGACATGCTATTTGCCACAAAATCTTTGGCAATGGGGTTCTGAGGTGGCTTGGTGATGCTGTTGTTTTGTaGAGCATCTTGAATGGAATT | + |
|
Preference number: 2 (lower is better) Translates to: GHAICHKIFGNGVLRWLGDAVVL*SILNGI Trigger: AATTCCATTCAAGATGCTGCACAAAACAACAGCATC...ACCAAGCCACCTCAGAACCCCATTGCCAAAGATTTTGTGGCAAATAGCATGTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
||
| 3UTR-3UTR TCA 90 bp | GTGCAGATATGGCGAGAGCTAACCGATGTTTATATGAACATGCTGTTACCCTTCAAGCACAGTCAAGACTaGGAAGGAATAGGCTTTAAA | + |
|
Preference number: 2 (lower is better) Translates to: VQIWRELTDVYMNMLLPFKHSQD*EGIGFK Trigger: TTTAAAGCCTATTCCTTCTCAGTCTTGACTGTGCTT...GAAGGGTAACAGCATGTTCATATAAACATCGGTTAGCTCTCGCCATATCTGCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
||
| 3UTR-3UTR GCA 90 bp | AAACAAAACCCAACCCAGGTTCTCAGTTGCTTCAGGAAAAGCAGGAGGATGCCATTAGGACAAGAAAGTTaGAGTCTCATGATTATTAGC | + |
|
Preference number: 2 (lower is better) Translates to: KQNPTQVLSCFRKSRRMPLGQES*SLMIIS Trigger: GCTAATAATCATGAGACTGCAACTTTCTTGTCCTAA...TGGCATCCTCCTGCTTTTCCTGAAGCAACTGAGAACCTGGGTTGGGTTTTGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| 3UTR-3UTR CCA 90 bp | TTCAGACAGCAGCTCACACTGGCCTTTGAAAACAGTAATTCATCTCTTGGTGGTTTCAAAGCTCAATCCTaGAGACACAGGAGATATCAA | + |
|
Preference number: 2 (lower is better) Translates to: FRQQLTLAFENSNSSLGGFKAQS*RHRRYQ Trigger: TTGATATCTCCTGTGTCTCCAGGATTGAGCTTTGAA...ACCACCAAGAGATGAATTACTGTTTTCAAAGGCCAGTGTGAGCTGCTGTCTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
||
| 3UTR-3UTR CCA 90 bp | ACCACACTATGCTCTGAGAGAATTTCTCAATTCAGCAGTTCATTGGAGACACTGAAACAAAAAGGAAGTTaGGTTTCAGCTGGAAGCCTC | + |
|
Preference number: 2 (lower is better) Translates to: TTLCSERISQFSSSLETLKQKGS*VSAGSL Trigger: GAGGCTTCCAGCTGAAACCCAACTTCCTTTTTGTTT...CAGTGTCTCCAATGAACTGCTGAATTGAGAAATTCTCTCAGAGCATAGTGTGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| 3UTR-3UTR GCA 90 bp | AGCATCCATCTCCTCCACATTCCGTTACAGACTTTTGCTCCTACCAAAATCAGCTCAACTACTGCTTATTaGTGCATCTCATATAAATGC | + |
|
Preference number: 2 (lower is better) Translates to: SIHLLHIPLQTFAPTKISSTTAY*CISYKC Trigger: GCATTTATATGAGATGCAGCAATAAGCAGTAGTTGA...GCTGATTTTGGTAGGAGCAAAAGTCTGTAACGGAATGTGGAGGAGATGGATGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| 3UTR-3UTR GCA 90 bp | AGCTCACACTGGCCTTTGAAAACAGTAATTCATCTCTTGGTGGTAACAGTTGCAGGCTTCTGGTGTTCTTaGAATTGGCAGCAATTAAAT | + |
|
Preference number: 2 (lower is better) Translates to: SSHWPLKTVIHLLVVTVAGFWCS*NWQQLN Trigger: ATTTAATTGCTGCCAATTGCAAGAACACCAGAAGCC...TGCAACTGTTACCACCAAGAGATGAATTACTGTTTTCAAAGGCCAGTGTGAGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| 3UTR-3UTR CCA 90 bp | AGCATCCATCTCCTCCACATTCCGTTACAGACTTTTGCTCCTACCAAAATCAGCATAAATGCTGTATGCTaGGTTCATTTCCTCATTTTG | + |
|
Preference number: 2 (lower is better) Translates to: SIHLLHIPLQTFAPTKISINAVC*VHFLIL Trigger: CAAAATGAGGAAATGAACCCAGCATACAGCATTTAT...GCTGATTTTGGTAGGAGCAAAAGTCTGTAACGGAATGTGGAGGAGATGGATGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| 3UTR-3UTR CCA 90 bp | GTGCAGATATGGCGAGAGCTAACCGATGTTTATATGAACATGCTGTTACCCTTCAATTTGCTTTATTTTTaGTCGTATGCAGACCCGGTT | + |
|
Preference number: 2 (lower is better) Translates to: VQIWRELTDVYMNMLLPFNLLYF*SYADPV Trigger: AACCGGGTCTGCATACGACCAAAAATAAAGCAAATT...GAAGGGTAACAGCATGTTCATATAAACATCGGTTAGCTCTCGCCATATCTGCAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| 3UTR-3UTR CCA 90 bp | ACCACACTATGCTCTGAGAGAATTTCTCAATTCAGCAGTTCATTGGAGACACTGGGTTCTGAGGTGGCTTaGTTTTATAAATACTTCCCA | + |
|
Preference number: 2 (lower is better) Translates to: TTLCSERISQFSSSLETLGSEVA*FYKYFP Trigger: TGGGAAGTATTTATAAAACCAAGCCACCTCAGAACC...CAGTGTCTCCAATGAACTGCTGAATTGAGAAATTCTCTCAGAGCATAGTGTGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| 3UTR CAA 90 bp | TGCTCACCTGTTCAACAAACACTGCATCAGGTTTTGTGGACATATTaGTTTGACAGTACTTTTTACTTTGGGCTAATGCATACCTGTCTG | + |
|
Preference number: 2 (lower is better) Translates to: CSPVQQTLHQVLWTY*FDSTFYFGLMHTCL Trigger: CAGACAGGTATGCATTAGCCCAAAGTAAAAAGTACTGTCAAACAAATATGTCCACAAAACCTGATGCAGTGTTTGTTGAACAGGTGAGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| 3UTR-3UTR TCA 90 bp | CACTGCATCAGGTTTTGTGGACATATTTGTTTGACAGTACTTTTTACTTTGGGCTTGCTTGACAGTCGTTaGATTACAAGCAGTGAGCTT | + |
|
Preference number: 2 (lower is better) Translates to: HCIRFCGHICLTVLFTLGLLDSR*ITSSEL Trigger: AAGCTCACTGCTTGTAATTCAACGACTGTCAAGCAA...GCCCAAAGTAAAAAGTACTGTCAAACAAATATGTCCACAAAACCTGATGCAGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| 3UTR-3UTR TCA 90 bp | ACCACACTATGCTCTGAGAGAATTTCTCAATTCAGCAGTTCATTGGAGACACTGAGGCCAAACGCTCTATaGTATGTGAGATATTTAATG | + |
|
Preference number: 2 (lower is better) Translates to: TTLCSERISQFSSSLETLRPNAL*YVRYLM Trigger: CATTAAATATCTCACATATCATAGAGCGTTTGGCCT...CAGTGTCTCCAATGAACTGCTGAATTGAGAAATTCTCTCAGAGCATAGTGTGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| 3UTR-3UTR GCA 90 bp | TTCAGACAGCAGCTCACACTGGCCTTTGAAAACAGTAATTCATCTCTTGGTGGTACTACTGCTTATTGCTaGATCTCATATAAATGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: FRQQLTLAFENSNSSLGGTTAYC*ISYKCC Trigger: ACAGCATTTATATGAGATGCAGCAATAAGCAGTAGT...ACCACCAAGAGATGAATTACTGTTTTCAAAGGCCAGTGTGAGCTGCTGTCTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
||
| 3UTR-3UTR CCA 90 bp | TTCAGACAGCAGCTCACACTGGCCTTTGAAAACAGTAATTCATCTCTTGGTGGTTTGGCAGCAATTAAATaGAAAAATAAGTCTCAGGTG | + |
|
Preference number: 2 (lower is better) Translates to: FRQQLTLAFENSNSSLGGLAAIK*KNKSQV Trigger: CACCTGAGACTTATTTTTCCATTTAATTGCTGCCAA...ACCACCAAGAGATGAATTACTGTTTTCAAAGGCCAGTGTGAGCTGCTGTCTGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| 3UTR CAA 90 bp | AACCAACAAAGGTGCTCACCTGTTCAACAAACACTGCATCAGGTTTaGTGGACATATTTGTTTGACAGTACTTTTTACTTTGGGCTAATG | + |
|
Preference number: 2 (lower is better) Translates to: NQQRCSPVQQTLHQV*WTYLFDSTFYFGLM Trigger: CATTAGCCCAAAGTAAAAAGTACTGTCAAACAAATATGTCCACAAAACCTGATGCAGTGTTTGTTGAACAGGTGAGCACCTTTGTTGGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| 3UTR-3UTR TCA 90 bp | CACTGCATCAGGTTTTGTGGACATATTTGTTTGACAGTACTTTTTACTTTGGGCAGCACAGTTACTATTTaGAGAATACGTGACACCCTT | + |
|
Preference number: 2 (lower is better) Translates to: HCIRFCGHICLTVLFTLGSTVTI*RIRDTL Trigger: AAGGGTGTCACGTATTCTTCAAATAGTAACTGTGCT...GCCCAAAGTAAAAAGTACTGTCAAACAAATATGTCCACAAAACCTGATGCAGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| 3UTR-3UTR GCA 90 bp | CACTGCATCAGGTTTTGTGGACATATTTGTTTGACAGTACTTTTTACTTTGGGCTGCATCTCATATAAATaGTGTATGCTGGGTTCATTT | + |
|
Preference number: 2 (lower is better) Translates to: HCIRFCGHICLTVLFTLGCISYK*CMLGSF Trigger: AAATGAACCCAGCATACAGCATTTATATGAGATGCA...GCCCAAAGTAAAAAGTACTGTCAAACAAATATGTCCACAAAACCTGATGCAGTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| 3UTR GCA 72 bp | CACAGCCCTGCCGAGCAGACGCCCACCAGCACTCCCTaGATGTGTCCTCGGTTCAGGGACTGTTTGCTAACC | + |
|
Preference number: 3 (lower is better) Translates to: HSPAEQTPTSTP*MCPRFRDCLLT Trigger: GGTTAGCAAACAGTCCCTGAACCGAGGACACATGCAGGGAGTGCTGGTGGGCGTCTGCTCGGCAGGGCTGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| 3UTR CCA 72 bp | CGCACACACATGTGTGCCTGTGTCAGAGCTCACGTGTaGTGCGGGCAATCTGCTGGAGTCAGGTCTGTCTAC | + |
|
Preference number: 3 (lower is better) Translates to: RTHMCACVRAHV*CGQSAGVRSVY Trigger: GTAGACAGACCTGACTCCAGCAGATTGCCCGCACCACACGTGAGCTCTGACACAGGCACACATGTGTGTGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
||
| 3UTR-3UTR CAA 90 bp | AGCGTGCTAAGTAGGCCTGTCAACAAACGCTCCCTGATGGTGGAGGCTTTCAGCGCAAGACTGGACCTTTaGTCTCTCACCCCCACCCCA | + |
|
Preference number: 3 (lower is better) Translates to: SVLSRPVNKRSLMVEAFSARLDL*SLTPTP Trigger: TGGGGTGGGGGTGAGAGACAAAAGGTCCAGTCTTGC...GCTGAAAGCCTCCACCATCAGGGAGCGTTTGTTGACAGGCCTACTTAGCACGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
||
| 3UTR TCA 72 bp | GGGGCAGCCCACCAGATCCTCAGTGTCCACATGAAGTaGCAACTGCTGGCCAATGAGGGCCCATCATTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: GAAHQILSVHMK*QLLANEGPSFL Trigger: CAAGAATGATGGGCCCTCATTGGCCAGCAGTTGTCACTTCATGTGGACACTGAGGATCTGGTGGGCTGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
||
| 3UTR CCA 72 bp | AGCCCCAGAGCAGGAAGCCAGGACTCCAGTTCACAATaGAGAGTGCCTTGTGGGACTATCTTCTGCCCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: SPRAGSQDSSSQ*RVPCGTIFCPG Trigger: ACCTGGGCAGAAGATAGTCCCACAAGGCACTCTCCATTGTGAACTGGAGTCCTGGCTTCCTGCTCTGGGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
||
| 3UTR TCA 72 bp | TACATGCTGACTGAGGTCCCAGGTCACAGAGCCCTATaGCTCTACACTGCCATCGCCAGGATACCAAGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: YMLTEVPGHRAL*LYTAIARIPSR Trigger: CCTGCTTGGTATCCTGGCGATGGCAGTGTAGAGTCATAGGGCTCTGTGACCTGGGACCTCAGTCAGCATGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
||
| 3UTR GCA 72 bp | GTTCCTCTGGGAGTGGACTGCCCAGCACAGCCTTACTaGAGGGGTCAGAGAAACGAAGCAAAAAGAACTCTG | + |
|
Preference number: 3 (lower is better) Translates to: VPLGVDCPAQPY*RGQRNEAKRTL Trigger: CAGAGTTCTTTTTGCTTCGTTTCTCTGACCCCTGCAGTAAGGCTGTGCTGGGCAGTCCACTCCCAGAGGAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
||
| 3UTR CCA 72 bp | ATACTTCCCACACACAGCAAAGAGCAGCTCGGACCTTaGGCTCGGCAGGCTTTAGCTTGTTCAAGAGCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: ILPTHSKEQLGP*ARQALACSRAH Trigger: GTGAGCTCTTGAACAAGCTAAAGCCTGCCGAGCCCAAGGTCCGAGCTGCTCTTTGCTGTGTGTGGGAAGTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
||
| 3UTR-3UTR CAA 90 bp | ATGGGCAGTGATTCTCCACTGTCATCCACCTGCATCTTTTGCCCCGGCGGCGATCTATGGTTTGTGGTGTaGGAGACAGAACCCAAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: MGSDSPLSSTCIFCPGGDLWFVV*ETEPKK Trigger: TTTCTTGGGTTCTGTCTCCAACACCACAAACCATAG...ATCGCCGCCGGGGCAAAAGATGCAGGTGGATGACAGTGGAGAATCACTGCCCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
||
| 3UTR-3UTR CAA 90 bp | AGCGTGCTAAGTAGGCCTGTCAACAAACGCTCCCTGATGGTGGAGGCTTTCAGCCAAACAAAAAGGAAGTaGGGTTTCAGCTGGAAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: SVLSRPVNKRSLMVEAFSQTKRK*GFSWKP Trigger: AGGCTTCCAGCTGAAACCCAACTTCCTTTTTGTTTG...GCTGAAAGCCTCCACCATCAGGGAGCGTTTGTTGACAGGCCTACTTAGCACGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
||
| 3UTR TCA 72 bp | GCCCTGAAGACCTCTGGTAAGACCTGCTGCAGAAAATaGAGACTTTCAGACAGCAGCTCACACTGGCCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: ALKTSGKTCCRK*RLSDSSSHWPL Trigger: CAAAGGCCAGTGTGAGCTGCTGTCTGAAAGTCTTCATTTTCTGCAGCAGGTCTTACCAGAGGTCTTCAGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
||
| 3UTR GCA 72 bp | AGCAATGATCCCCATGGCTCACTCCCTAAGGAGCCATaGTCTGAGACTGAGAGTCCTTTCTTATCAAGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: SNDPHGSLPKEP*SETESPFLSRP Trigger: TGGCCTTGATAAGAAAGGACTCTCAGTCTCAGAGCATGGCTCCTTAGGGAGTGAGCCATGGGGATCATTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
||
| 3UTR CCA 72 bp | CATCTTGTTCAAACAAAAAGGAAGTTGGGTTTCAGCTaGAAGCCTCAGGCCCTCGGAAGTACGCTCCGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: HLVQTKRKLGFS*KPQALGSTLRE Trigger: CTCACGGAGCGTACTTCCGAGGGCCTGAGGCTTCCAGCTGAAACCCAACTTCCTTTTTGTTTGAACAAGATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
||
| 3UTR-3UTR CAA 90 bp | AGCGTGCTAAGTAGGCCTGTCAACAAACGCTCCCTGATGGTGGAGGCTTTCAGCCTCATCTCCCGAGGTTaGTTCTTTAGATTATTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: SVLSRPVNKRSLMVEAFSLISRG*FFRLFP Trigger: GGGAAATAATCTAAAGAACAAACCTCGGGAGATGAG...GCTGAAAGCCTCCACCATCAGGGAGCGTTTGTTGACAGGCCTACTTAGCACGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
||
| 3UTR TCA 72 bp | CAGGGACTGAATGGGATAGCAATGTGGCATGGGCTCTaGCATTCTCCTGATGCTAAGTCAAAGCCAATGCTC | + |
|
Preference number: 3 (lower is better) Translates to: QGLNGIAMWHGL*HSPDAKSKPML Trigger: GAGCATTGGCTTTGACTTAGCATCAGGAGAATGTCAGAGCCCATGCCACATTGCTATCCCATTCAGTCCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
||
| 3UTR TCA 72 bp | TGCCTCTGTTTCTCCAAGGAAACAGAATGTACATGCTaGCTGAGGTCCCAGGTCACAGAGCCCTATGACTCT | + |
|
Preference number: 3 (lower is better) Translates to: CLCFSKETECTC*LRSQVTEPYDS Trigger: AGAGTCATAGGGCTCTGTGACCTGGGACCTCAGTCAGCATGTACATTCTGTTTCCTTGGAGAAACAGAGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
||
| 3UTR GCA 72 bp | GAGGTAAAGCGTACAAGCCGTGTGTCCGCACTAACCTaGCTCTGTTTCTCCAAGGAAACAGAATGTACATGC | + |
|
Preference number: 3 (lower is better) Translates to: EVKRTSRVSALT*LCFSKETECTC Trigger: GCATGTACATTCTGTTTCCTTGGAGAAACAGAGGCAGGTTAGTGCGGACACACGGCTTGTACGCTTTACCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
||
| 3UTR CCA 72 bp | GCTTCAAGTATGCTACTGACAGAGCTTCAGACACCATaGCCACTGTCTGGTATTACGCATGGGCAGGAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: ASSMLLTELQTP*PLSGITHGQEE Trigger: TTCTTCCTGCCCATGCGTAATACCAGACAGTGGCCATGGTGTCTGAAGCTCTGTCAGTAGCATACTTGAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
||
| 3UTR-3UTR CAA 90 bp | AGCGTGCTAAGTAGGCCTGTCAACAAACGCTCCCTGATGGTGGAGGCTTTCAGCATTACAACACACACTTaGAAACACCATCCCCTAAAG | + |
|
Preference number: 3 (lower is better) Translates to: SVLSRPVNKRSLMVEAFSITTHT*KHHPLK Trigger: CTTTAGGGGATGGTGTTTCAAAGTGTGTGTTGTAAT...GCTGAAAGCCTCCACCATCAGGGAGCGTTTGTTGACAGGCCTACTTAGCACGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
||
| 3UTR-3UTR CAA 90 bp | ATGGGCAGTGATTCTCCACTGTCATCCACCTGCATCTTTTGCCCCGGCGGCGATTTGCACAAGTGCTGTTaGTTAGTTATGAAATCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: MGSDSPLSSTCIFCPGGDLHKCC*LVMKSG Trigger: ACCTGATTTCATAACTAACAAACAGCACTTGTGCAA...ATCGCCGCCGGGGCAAAAGATGCAGGTGGATGACAGTGGAGAATCACTGCCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
||
| 3UTR TCA 72 bp | CCAGAACCATGGTTGAAGACCACAGAAACAAGGAACTaGCCAGCTCTTTCCCCTGAGCATAAAGAACGTAGC | + |
|
Preference number: 3 (lower is better) Translates to: PEPWLKTTETRN*PALSPEHKERS Trigger: GCTACGTTCTTTATGCTCAGGGGAAAGAGCTGGTCAGTTCCTTGTTTCTGTGGTCTTCAACCATGGTTCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
||
| 3UTR TCA 72 bp | TCTGTTTCTCCAAGGAAACAGAATGTACATGCTGACTaGGGTCCCAGGTCACAGAGCCCTATGACTCTACAC | + |
|
Preference number: 3 (lower is better) Translates to: SVSPRKQNVHAD*GPRSQSPMTLH Trigger: GTGTAGAGTCATAGGGCTCTGTGACCTGGGACCTCAGTCAGCATGTACATTCTGTTTCCTTGGAGAAACAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
||
| 3UTR GCA 72 bp | ACGTCCCACTCTGCCCTCAAGTGTTCTGCATCAGGGTaGATTCTTCCTGCTAAGAGGACCATTCTTATCAAA | + |
|
Preference number: 3 (lower is better) Translates to: TSHSALKCSASG*ILPAKRTILIK Trigger: TTTGATAAGAATGGTCCTCTTAGCAGGAAGAATGCACCCTGATGCAGAACACTTGAGGGCAGAGTGGGACGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
||
| 3UTR CCA 72 bp | TGTCATCCACCTGCATCTTTTGCCCCGGCGGCGATGTaGTTTAGACCTCAGGTCTGTAATTGCAATACTTTT | + |
|
Preference number: 3 (lower is better) Translates to: CHPPASFAPAAM*FRPQVCNCNTF Trigger: AAAAGTATTGCAATTACAGACCTGAGGTCTAAACCACATCGCCGCCGGGGCAAAAGATGCAGGTGGATGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
||
| 3UTR-3UTR CAA 90 bp | AAACAAAACCCAACCCAGGTTCTCAGTTGCTTCAGGAAAAGCAGGAGGATGCCACCCCCAAACCTATCTTaGTTCTTTAACCCGCAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: KQNPTQVLSCFRKSRRMPPPNLS*FFNPQR Trigger: TCTCTGCGGGTTAAAGAACAAAGATAGGTTTGGGGG...TGGCATCCTCCTGCTTTTCCTGAAGCAACTGAGAACCTGGGTTGGGTTTTGTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
||
| 3UTR-3UTR CAA 90 bp | TTCAGACAGCAGCTCACACTGGCCTTTGAAAACAGTAATTCATCTCTTGGTGGTTCAGAAACATGTTCTTaGCCCAGAGTCTACCGAGGG | + |
|
Preference number: 3 (lower is better) Translates to: FRQQLTLAFENSNSSLGGSETCS*PRVYRG Trigger: CCCTCGGTAGACTCTGGGCAAAGAACATGTTTCTGA...ACCACCAAGAGATGAATTACTGTTTTCAAAGGCCAGTGTGAGCTGCTGTCTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
||
| 3UTR-3UTR CAA 90 bp | CATCTCCTCCACATTCCGTTACAGACTTTTGCTCCTACCAAAATCAGCAGCGGTAACAGTGAACCTGACTaGCTGATGTATGTGATGGCA | + |
|
Preference number: 3 (lower is better) Translates to: HLLHIPLQTFAPTKISSGNSEPD*LMYVMA Trigger: TGCCATCACATACATCAGCAAGTCAGGTTCACTGTT...ACCGCTGCTGATTTTGGTAGGAGCAAAAGTCTGTAACGGAATGTGGAGGAGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
||
| 3UTR-3UTR CAA 90 bp | CTTTCCCCTGAGCATAAAGAACGTAGCTCTTTCCTCTGTAAAGATGATGGAGGAACAGACAGGCCTGTTTaGACCAGGGATAAAAGACCG | + |
|
Preference number: 3 (lower is better) Translates to: LSPEHKERSSFLCKDDGGTDRPV*TRDKRP Trigger: CGGTCTTTTATCCCTGGTCAAAACAGGCCTGTCTGT...TCCTCCATCATCTTTACAGAGGAAAGAGCTACGTTCTTTATGCTCAGGGGAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
||
| 3UTR-3UTR CAA 90 bp | GATGATGGCCTCGTCTTGAACCAAGGAGACACTGAGGACTTCTTGAGGCCAAACGCTGCCATGTTTATATaGTATTTGAAAGTGTGCCGT | + |
|
Preference number: 3 (lower is better) Translates to: DDGLVLNQGDTEDFLRPNAAMFI*YLKVCR Trigger: ACGGCACACTTTCAAATACAATATAAACATGGCAGC...GTTTGGCCTCAAGAAGTCCTCAGTGTCTCCTTGGTTCAAGACGAGGCCATCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
||
| 3UTR-3UTR CAA 90 bp | GTGCAGATATGGCGAGAGCTAACCGATGTTTATATGAACATGCTGTTACCCTTCCGGTTCAGGGACTGTTaGCTAACCTTTAAATCGGGC | + |
|
Preference number: 3 (lower is better) Translates to: VQIWRELTDVYMNMLLPFRFRDC*LTFKSG Trigger: GCCCGATTTAAAGGTTAGCAAACAGTCCCTGAACCG...GAAGGGTAACAGCATGTTCATATAAACATCGGTTAGCTCTCGCCATATCTGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
||
| 3UTR TCA 72 bp | ATGGAGACCAAGCACAGTTACTATTTGAAGAATACGTaGCACCCTTCTCACTGCTTCTCCTGCCCCTGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: METKHSYYLKNT*HPSHCFSCPCS Trigger: AGAACAGGGGCAGGAGAAGCAGTGAGAAGGGTGTCACGTATTCTTCAAATAGTAACTGTGCTTGGTCTCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
||
| 3UTR TCA 72 bp | CACATGGGCCAATGGAGACCAAGCACAGTTACTATTTaGAGAATACGTGACACCCTTCTCACTGCTTCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: HMGQWRPSTVTI*RIRDTLLTASP Trigger: AGGAGAAGCAGTGAGAAGGGTGTCACGTATTCTTCAAATAGTAACTGTGCTTGGTCTCCATTGGCCCATGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
||
| 3UTR TCA 72 bp | GGAAAAATAAGTCTCAGGTGGCTTCAAGTATGCTACTaGCAGAGCTTCAGACACCATGGCCACTGTCTGGTA | + |
|
Preference number: 3 (lower is better) Translates to: GKISLRWLQVCY*QSFRHHGHCLV Trigger: TACCAGACAGTGGCCATGGTGTCTGAAGCTCTGTCAGTAGCATACTTGAAGCCACCTGAGACTTATTTTTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
||
| 3UTR CCA 72 bp | GGGAGAGATTTCATCTTGTTCAAACAAAAAGGAAGTTaGGTTTCAGCTGGAAGCCTCAGGCCCTCGGAAGTA | + |
|
Preference number: 3 (lower is better) Translates to: GRDFILFKQKGS*VSAGSLRPSEV Trigger: TACTTCCGAGGGCCTGAGGCTTCCAGCTGAAACCCAACTTCCTTTTTGTTTGAACAAGATGAAATCTCTCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
||
| 3UTR CCA 72 bp | GGTGTTGGAGACAGAACCCAAGAAAGAGCTTTTCCTTaGACTATAAACCAACCCAAAGGATGCTGCGGATCA | + |
|
Preference number: 3 (lower is better) Translates to: GVGDRTQERAFP*TINQPKGCCGS Trigger: TGATCCGCAGCATCCTTTGGGTTGGTTTATAGTCCAAGGAAAAGCTCTTTCTTGGGTTCTGTCTCCAACACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
||
| 3UTR-3UTR CAA 90 bp | TGTGTATACTACGAAAATCTCCTCTATTTGCAAGGCACAGGAAAAGGTGAGCCCTTCCCAGAACCATGGTaGAAGACCACAGAAACAAGG | + |
|
Preference number: 3 (lower is better) Translates to: CVYYENLLYLQGTGKGEPFPEPW*KTTETR Trigger: CCTTGTTTCTGTGGTCTTCAACCATGGTTCTGGGAA...GGGCTCACCTTTTCCTGTGCCTTGCAAATAGAGGAGATTTTCGTAGTATACACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
||
| 3UTR CCA 72 bp | TTTAAAAGGCCAAAGTTCATGGTGAAAGAGGGATTCTaGGAAAGAAGTGTCCTGAGGCCATTCCGGTCATCA | + |
|
Preference number: 3 (lower is better) Translates to: FKRPKFMVKEGF*ERSVLRPFRSS Trigger: TGATGACCGGAATGGCCTCAGGACACTTCTTTCCCAGAATCCCTCTTTCACCATGAACTTTGGCCTTTTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
||
| 3UTR-3UTR CAA 90 bp | GGACATGCTATTTGCCACAAAATCTTTGGCAATGGGGTTCTGAGGTGGCTTGGTTTCTGTTTTCCTTTTTaGGGACTGGGAATACTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: GHAICHKIFGNGVLRWLGFCFPF*GLGILP Trigger: AGGAAGTATTCCCAGTCCCAAAAAAGGAAAACAGAA...ACCAAGCCACCTCAGAACCCCATTGCCAAAGATTTTGTGGCAAATAGCATGTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
||
| 3UTR GCA 72 bp | AGAGTATTGATATATGCTCCGGGTAATCGTACAGATTaGAGATATGAGGATGCACAAACCCCACACCACCTA | + |
|
Preference number: 3 (lower is better) Translates to: RVLIYAPGNRTD*RYEDAQTPHHL Trigger: TAGGTGGTGTGGGGTTTGTGCATCCTCATATCTGCAATCTGTACGATTACCCGGAGCATATATCAATACTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
||
| 3UTR-3UTR CAA 90 bp | TGTGTATACTACGAAAATCTCCTCTATTTGCAAGGCACAGGAAAAGGTGAGCCCTTCCGTTACAGACTTTaGCTCCTACCAAAATCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: CVYYENLLYLQGTGKGEPFRYRL*LLPKSA Trigger: TGCTGATTTTGGTAGGAGCAAAAGTCTGTAACGGAA...GGGCTCACCTTTTCCTGTGCCTTGCAAATAGAGGAGATTTTCGTAGTATACACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
||
| 3UTR-3UTR CAA 90 bp | AAACAAAACCCAACCCAGGTTCTCAGTTGCTTCAGGAAAAGCAGGAGGATGCCAGTTTTGTGCAGCATCTaGAATGGAATTGTCAAATGT | + |
|
Preference number: 3 (lower is better) Translates to: KQNPTQVLSCFRKSRRMPVLCSI*NGIVKC Trigger: ACATTTGACAATTCCATTCAAGATGCTGCACAAAAC...TGGCATCCTCCTGCTTTTCCTGAAGCAACTGAGAACCTGGGTTGGGTTTTGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
||
| 3UTR GCA 72 bp | AATACAGGGCCTCTCGTCACCAGTAAAACCACACTATaGTCTGAGAGAATTTCTCAATTCAGCAGTTCATTG | + |
|
Preference number: 3 (lower is better) Translates to: NTGPLVTSKTTL*SERISQFSSSL Trigger: CAATGAACTGCTGAATTGAGAAATTCTCTCAGAGCATAGTGTGGTTTTACTGGTGACGAGAGGCCCTGTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
||
| 3UTR CCA 72 bp | CTTTCCTCTGTAAAGATGATGGAGGAGGATTTACAATaGAGAACTCGGGGGAATATACTGGAAGGCTTAGTT | + |
|
Preference number: 3 (lower is better) Translates to: LSSVKMMEEDLQ*RTRGNILEGLV Trigger: AACTAAGCCTTCCAGTATATTCCCCCGAGTTCTCCATTGTAAATCCTCCTCCATCATCTTTACAGAGGAAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
||
| 3UTR CCA 72 bp | GAGCCAGGCTATGTATTGCTGACAAACATAATCAACTaGCCTGAATTCTATTGTCCCTTACGTGGCATACTT | + |
|
Preference number: 3 (lower is better) Translates to: EPGYVLLTNIIN*PEFYCPLRGIL Trigger: AAGTATGCCACGTAAGGGACAATAGAATTCAGGCCAGTTGATTATGTTTGTCAGCAATACATAGCCTGGCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
||
| 3UTR GCA 72 bp | CAGTGTGCTGCCATGTTTATATTGTATTTGAAAGTGTaGCGTCTGTTTATAGCAGTTCACTCAGTGACCTCT | + |
|
Preference number: 3 (lower is better) Translates to: QCAAMFILYLKV*RLFIAVHSVTS Trigger: AGAGGTCACTGAGTGAACTGCTATAAACAGACGGCACACTTTCAAATACAATATAAACATGGCAGCACACTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
||
| 3UTR CCA 72 bp | GTTTTAGAAGAAAGAATTCCATGTACCACCACATGTTaGCATAGCATTCTTGGTGGCTTCAAAGGGAACATG | + |
|
Preference number: 3 (lower is better) Translates to: VLEERIPCTTTC*HSILGGFKGNM Trigger: CATGTTCCCTTTGAAGCCACCAAGAATGCTATGCCAACATGTGGTGGTACATGGAATTCTTTCTTCTAAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
||
| 3UTR CCA 72 bp | GAATATACTGGAAGGCTTAGTTTTATTGTTCCACTGTaGGAGGCAGCTAATCCCAACATACATCTTTTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: EYTGRLSFIVPL*EAANPNIHLFP Trigger: AGGGAAAAGATGTATGTTGGGATTAGCTGCCTCCCACAGTGGAACAATAAAACTAAGCCTTCCAGTATATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
||
| 3UTR CCA 72 bp | GTTGGGACATGCTATTTGCCACAAAATCTTTGGCAATaGGGTTCTGAGGTGGCTTGGTTTTATAAATACTTC | + |
|
Preference number: 3 (lower is better) Translates to: VGTCYLPQNLWQ*GSEVAWFYKYF Trigger: GAAGTATTTATAAAACCAAGCCACCTCAGAACCCCATTGCCAAAGATTTTGTGGCAAATAGCATGTCCCAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
||
| 3UTR-3UTR CAA 90 bp | CTTTCCCCTGAGCATAAAGAACGTAGCTCTTTCCTCTGTAAAGATGATGGAGGACAACATATTACAGGTTaGCCTATAAGCTGTTTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: LSPEHKERSSFLCKDDGGQHITG*PISCFL Trigger: CAAGAAACAGCTTATAGGCAAACCTGTAATATGTTG...TCCTCCATCATCTTTACAGAGGAAAGAGCTACGTTCTTTATGCTCAGGGGAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
||
| 3UTR-3UTR CAA 90 bp | ACCACACTATGCTCTGAGAGAATTTCTCAATTCAGCAGTTCATTGGAGACACTGACACTGCATCAGGTTTaGTGGACATATTTGTTTGAC | + |
|
Preference number: 3 (lower is better) Translates to: TTLCSERISQFSSSLETLTLHQV*WTYLFD Trigger: GTCAAACAAATATGTCCACAAAACCTGATGCAGTGT...CAGTGTCTCCAATGAACTGCTGAATTGAGAAATTCTCTCAGAGCATAGTGTGGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
||
| 3UTR TCA 72 bp | GACACTCTGCAGTCATCGGACTTGCTTGACAGTCGTTaGATTACAAGCAGTGAGCTTTTTGCTATATATATA | + |
|
Preference number: 3 (lower is better) Translates to: DTLQSSDLLDSR*ITSSELFAIYI Trigger: TATATATATAGCAAAAAGCTCACTGCTTGTAATTCAACGACTGTCAAGCAAGTCCGATGACTGCAGAGTGTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
||
| 3UTR TCA 72 bp | TGGCATAGCATTCTTGGTGGCTTCAAAGGGAACATGTaGACACACCAGCATTTAGAACCTGACTATTTAATA | + |
|
Preference number: 3 (lower is better) Translates to: WHSILGGFKGNM*THQHLEPDYLI Trigger: TATTAAATAGTCAGGTTCTAAATGCTGGTGTGTTCACATGTTCCCTTTGAAGCCACCAAGAATGCTATGCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
||
| 3UTR GCA 72 bp | GTAACCAACAAAGGTGCTCACCTGTTCAACAAACACTaGATCAGGTTTTGTGGACATATTTGTTTGACAGTA | + |
|
Preference number: 3 (lower is better) Translates to: VTNKGAHLFNKH*IRFCGHICLTV Trigger: TACTGTCAAACAAATATGTCCACAAAACCTGATGCAGTGTTTGTTGAACAGGTGAGCACCTTTGTTGGTTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
||
| 3UTR CCA 72 bp | TGGCTTCTGGTGTTCTTGCAATTGGCAGCAATTAAATaGAAAAATAAGTCTCAGGTGGCTTCAAGTATGCTA | + |
|
Preference number: 3 (lower is better) Translates to: WLLVFLQLAAIK*KNKSQVASSML Trigger: TAGCATACTTGAAGCCACCTGAGACTTATTTTTCCATTTAATTGCTGCCAATTGCAAGAACACCAGAAGCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
||
| 3UTR TCA 72 bp | GATGATGCAGAGATGCTGTTGTTTTGTGCAGCATCTTaGATGGAATTGTCAAATGTGACAAAACGTGTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: DDAEMLLFCAAS*MELSNVTKRVF Trigger: AAAGACACGTTTTGTCACATTTGACAATTCCATTCAAGATGCTGCACAAAACAACAGCATCTCTGCATCATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
||
| 3UTR GCA 72 bp | AGAACTCTGATTTCTAGGACATCAACTACTGCTTATTaGTGCATCTCATATAAATGCTGTATGCTGGGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: RTLISRTSTTAY*CISYKCCMLGS Trigger: TGAACCCAGCATACAGCATTTATATGAGATGCAGCAATAAGCAGTAGTTGATGTCCTAGAAATCAGAGTTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
||
| 3UTR CCA 72 bp | ATATGCTTATTCTTTAACATAACTCCTGCTTATATATaGGCAGTGATTCTCCACTGTCATCCACCTGCATCT | + |
|
Preference number: 3 (lower is better) Translates to: ICLFFNITPAYI*AVILHCHPPAS Trigger: AGATGCAGGTGGATGACAGTGGAGAATCACTGCCCATATATAAGCAGGAGTTATGTTAAAGAATAAGCATAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
||
| 3UTR GCA 72 bp | ACTCTGATTTCTAGGACATCAACTACTGCTTATTGCTaGATCTCATATAAATGCTGTATGCTGGGTTCATTT | + |
|
Preference number: 3 (lower is better) Translates to: TLISRTSTTAYC*ISYKCCMLGSF Trigger: AAATGAACCCAGCATACAGCATTTATATGAGATGCAGCAATAAGCAGTAGTTGATGTCCTAGAAATCAGAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
||
| 3UTR CCA 72 bp | CCCAGAAAGACTTCAACCAAAGCATTTTTACTTCAATaGTGTTTCAATATAATGACTGAGTGCCTCAAGTGT | + |
|
Preference number: 3 (lower is better) Translates to: PRKTSTKAFLLQ*CFNIMTECLKC Trigger: ACACTTGAGGCACTCAGTCATTATATTGAAACACCATTGAAGTAAAAATGCTTTGGTTGAAGTCTTTCTGGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
||
| 3UTR TCA 72 bp | GGAGACACTGAGGACTTCTTGAGGCCAAACGCTCTATaGTATGTGAGATATTTAATGTTACTTATATGTATA | + |
|
Preference number: 3 (lower is better) Translates to: GDTEDFLRPNAL*YVRYLMLLICI Trigger: TATACATATAAGTAACATTAAATATCTCACATATCATAGAGCGTTTGGCCTCAAGAAGTCCTCAGTGTCTCC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
||
| 3UTR CAA 72 bp | AGAGCAGCTCGGACCTTGGGCTCGGCAGGCTTTAGCTaGTTCAAGAGCTCACCTCAGATAACCAATGTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: RAARTLGSAGFS*FKSSPQITNVP Trigger: CGGGACATTGGTTATCTGAGGTGAGCTCTTGAACAAGCTAAAGCCTGCCGAGCCCAAGGTCCGAGCTGCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
||
| 3UTR CAA 72 bp | CCACACATGGTCTTCTGGGTGCAGGACCTGTGGATGTaGTCGCTATACACAAGGCACACAACTGTCGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PHMVFWVQDLWM*SLYTRHTTVEA Trigger: TGCCTCGACAGTTGTGTGCCTTGTGTATAGCGACAACATCCACAGGTCCTGCACCCAGAAGACCATGTGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
||
| 3UTR CAA 72 bp | AATACTTCCCACACACAGCAAAGAGCAGCTCGGACCTaGGGCTCGGCAGGCTTTAGCTTGTTCAAGAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: NTSHTQQRAART*GSAGFSLFKSS Trigger: TGAGCTCTTGAACAAGCTAAAGCCTGCCGAGCCCAAGGTCCGAGCTGCTCTTTGCTGTGTGTGGGAAGTATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
||
| CDS-3UTR CCA 90 bp | ATGGGCAGTGATTCTCCACTGTCATCCACCTGCATCTTTTGCCCCGGCGGCGATTCTGATGGAGTTTCCTaGGATGTGGAACTGGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: MGSDSPLSSTCIFCPGGDSDGVS*DVELED Trigger: ATCTTCCAGTTCCACATCCCAGGAAACTCCATCAGA...ATCGCCGCCGGGGCAAAAGATGCAGGTGGATGACAGTGGAGAATCACTGCCCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
||
| CDS-3UTR GCA 90 bp | AGCGTGCTAAGTAGGCCTGTCAACAAACGCTCCCTGATGGTGGAGGCTTTCAGCGTAACGGCCCTTTTATaGGCCAATGGTGATCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SVLSRPVNKRSLMVEAFSVTALL*ANGDQR Trigger: TCTTTGATCACCATTGGCGCATAAAAGGGCCGTTAC...GCTGAAAGCCTCCACCATCAGGGAGCGTTTGTTGACAGGCCTACTTAGCACGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| 3UTR CAA 72 bp | ATTACGCATGGGCAGGAAGAAGATGATGGCCTCGTCTaGAACCAAGGAGACACTGAGGACTTCTTGAGGCCA | + |
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Preference number: 4 (lower is better) Translates to: ITHGQEEDDGLV*NQGDTEDFLRP Trigger: TGGCCTCAAGAAGTCCTCAGTGTCTCCTTGGTTCAAGACGAGGCCATCATCTTCTTCCTGCCCATGCGTAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| 3UTR CAA 72 bp | CGAGCATCCATCTCCTCCACATTCCGTTACAGACTTTaGCTCCTACCAAAATCAGCAGCGGTCTTGCAAAGC | + |
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Preference number: 4 (lower is better) Translates to: RASISSTFRYRL*LLPKSAAVLQS Trigger: GCTTTGCAAGACCGCTGCTGATTTTGGTAGGAGCAAAAGTCTGTAACGGAATGTGGAGGAGATGGATGCTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| 3UTR CAA 72 bp | AGCACTCCCTGCATGTGTCCTCGGTTCAGGGACTGTTaGCTAACCTTTAAATCGGGCAACATTCAAGGCAGA | + |
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Preference number: 4 (lower is better) Translates to: STPCMCPRFRDC*LTFKSGNIQGR Trigger: TCTGCCTTGAATGTTGCCCGATTTAAAGGTTAGCAAACAGTCCCTGAACCGAGGACACATGCAGGGAGTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| CDS-3UTR CCA 90 bp | CATCTCCTCCACATTCCGTTACAGACTTTTGCTCCTACCAAAATCAGCAGCGGTGGTGATCAAAGAGCCTaGCTTTCTGTGCTTCCACGA | + |
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Preference number: 4 (lower is better) Translates to: HLLHIPLQTFAPTKISSGGDQRA*LSVLPR Trigger: TCGTGGAAGCACAGAAAGCCAGGCTCTTTGATCACC...ACCGCTGCTGATTTTGGTAGGAGCAAAAGTCTGTAACGGAATGTGGAGGAGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| CDS-3UTR CCA 90 bp | GCAAATTTCCAACTCCAAGACCCACACATCCTCACCACACGCTCCTTTGCTAGTAGCGCATTCCCACTTTaGGAGTTTTTCAGGATGTCC | + |
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Preference number: 4 (lower is better) Translates to: ANFQLQDPHILTTRSFASSAFPL*EFFRMS Trigger: GGACATCCTGAAAAACTCCCAAAGTGGGAATGCGCT...ACTAGCAAAGGAGCGTGTGGTGAGGATGTGTGGGTCTTGGAGTTGGAAATTTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| 3UTR CAA 72 bp | GGGGAGAGATTTCATCTTGTTCAAACAAAAAGGAAGTaGGGTTTCAGCTGGAAGCCTCAGGCCCTCGGAAGT | + |
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Preference number: 4 (lower is better) Translates to: GERFHLVQTKRK*GFSWKPQALGS Trigger: ACTTCCGAGGGCCTGAGGCTTCCAGCTGAAACCCAACTTCCTTTTTGTTTGAACAAGATGAAATCTCTCCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| CDS-3UTR TCA 90 bp | AAACAAAACCCAACCCAGGTTCTCAGTTGCTTCAGGAAAAGCAGGAGGATGCCATTTATGCGCCAATGGTaGTCAAAGAGCCTGGCTTTC | + |
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Preference number: 4 (lower is better) Translates to: KQNPTQVLSCFRKSRRMPFMRQW*SKSLAF Trigger: GAAAGCCAGGCTCTTTGATCACCATTGGCGCATAAA...TGGCATCCTCCTGCTTTTCCTGAAGCAACTGAGAACCTGGGTTGGGTTTTGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| 3UTR CAA 72 bp | ACTACACTACACACCCCAAAGGCCTTGAGAATTCCCTaGAAATCTTTCGACACCACAGCAGTCCTGTTCAGT | + |
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Preference number: 4 (lower is better) Translates to: TTLHTPKALRIP*KSFDTTAVLFS Trigger: ACTGAACAGGACTGCTGTGGTGTCGAAAGATTTCAAGGGAATTCTCAAGGCCTTTGGGGTGTGTAGTGTAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| 3UTR CAA 72 bp | GATGGTGGAGGCTTTCAGCTGTGCTGTGACCTACACTaGAGAGTATTGATATATGCTCCGGGTAATCGTACA | + |
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Preference number: 4 (lower is better) Translates to: DGGGFQLCCDLH*RVLIYAPGNRT Trigger: TGTACGATTACCCGGAGCATATATCAATACTCTCAAGTGTAGGTCACAGCACAGCTGAAAGCCTCCACCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| CDS-3UTR TCA 90 bp | GGACATGCTATTTGCCACAAAATCTTTGGCAATGGGGTTCTGAGGTGGCTTGGTTTCTTCCTTCTTTTCTaGTGGAGTTTCCTGGGATGT | + |
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Preference number: 4 (lower is better) Translates to: GHAICHKIFGNGVLRWLGFFLLF*WSFLGC Trigger: ACATCCCAGGAAACTCCATCAGAAAAGAAGGAAGAA...ACCAAGCCACCTCAGAACCCCATTGCCAAAGATTTTGTGGCAAATAGCATGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| CDS-3UTR CCA 90 bp | GTGCAGATATGGCGAGAGCTAACCGATGTTTATATGAACATGCTGTTACCCTTCCCTGGGATGTGGAACTaGAAGATAAAACCCTCTTGG | + |
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Preference number: 4 (lower is better) Translates to: VQIWRELTDVYMNMLLPFPGMWN*KIKPSW Trigger: CCAAGAGGGTTTTATCTTCCAGTTCCACATCCCAGG...GAAGGGTAACAGCATGTTCATATAAACATCGGTTAGCTCTCGCCATATCTGCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| 3UTR CAA 72 bp | CACATGCGTTGCTGCACACAGTTCTGTTTTCCTTTTTaGGGACTGGGAATACTTCCTAGGAAATCTGCTCTC | + |
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Preference number: 4 (lower is better) Translates to: HMRCCTQFCFPF*GLGILPRKSAL Trigger: GAGAGCAGATTTCCTAGGAAGTATTCCCAGTCCCAAAAAAGGAAAACAGAACTGTGTGCAGCAACGCATGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| CDS-3UTR CCA 90 bp | CTTTCCCCTGAGCATAAAGAACGTAGCTCTTTCCTCTGTAAAGATGATGGAGGAGAGTTTCCTGGGATGTaGAACTGGAAGATAAAACCC | + |
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Preference number: 4 (lower is better) Translates to: LSPEHKERSSFLCKDDGGEFPGM*NWKIKP Trigger: GGGTTTTATCTTCCAGTTCCACATCCCAGGAAACTC...TCCTCCATCATCTTTACAGAGGAAAGAGCTACGTTCTTTATGCTCAGGGGAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| 3UTR CAA 72 bp | TACAGACTTTTGCTCCTACCAAAATCAGCAGCGGTCTaGCAAAGCTTGATGCAGTTAAACAGTGAACCTGAC | + |
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Preference number: 4 (lower is better) Translates to: YRLLLLPKSAAV*QSLMQLNSEPD Trigger: GTCAGGTTCACTGTTTAACTGCATCAAGCTTTGCAAGACCGCTGCTGATTTTGGTAGGAGCAAAAGTCTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| 3UTR CAA 72 bp | AGCAGGCTCCAGTGTGCTGCCATGTTTATATTGTATTaGAAAGTGTGCCGTCTGTTTATAGCAGTTCACTCA | + |
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Preference number: 4 (lower is better) Translates to: SRLQCAAMFILY*KVCRLFIAVHS Trigger: TGAGTGAACTGCTATAAACAGACGGCACACTTTCAAATACAATATAAACATGGCAGCACACTGGAGCCTGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| CDS-3UTR TCA 90 bp | AGCTCACACTGGCCTTTGAAAACAGTAATTCATCTCTTGGTGGTAACAGTTGCAGTCTTCTTAAACCGTTaGTACAGACTGATAGATTTG | + |
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Preference number: 4 (lower is better) Translates to: SSHWPLKTVIHLLVVTVAVFLNR*YRLIDL Trigger: CAAATCTATCAGTCTGTATCAACGGTTTAAGAAGAC...TGCAACTGTTACCACCAAGAGATGAATTACTGTTTTCAAAGGCCAGTGTGAGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| 3UTR CAA 72 bp | AGGTGCTCACCTGTTCAACAAACACTGCATCAGGTTTaGTGGACATATTTGTTTGACAGTACTTTTTACTTT | + |
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Preference number: 4 (lower is better) Translates to: RCSPVQQTLHQV*WTYLFDSTFYF Trigger: AAAGTAAAAAGTACTGTCAAACAAATATGTCCACAAAACCTGATGCAGTGTTTGTTGAACAGGTGAGCACCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| 3UTR CAA 72 bp | TCCAAAAATACCAGTTTCCAATGGCTTCTGGTGTTCTaGCAATTGGCAGCAATTAAATGGAAAAATAAGTCT | + |
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Preference number: 4 (lower is better) Translates to: SKNTSFQWLLVF*QLAAIKWKNKS Trigger: AGACTTATTTTTCCATTTAATTGCTGCCAATTGCAAGAACACCAGAAGCCATTGGAAACTGGTATTTTTGGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| CDS GCA 90 bp | GGTAAAGGAGGTTCCTCCCAAGGTCACGGTGTAGCGGGCAGGCGTTaGGATCTTAAACATGGCGTAGGCTGTCAGCGCATTCCCACTTTG | + |
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Preference number: 5 (lower is better) Translates to: GKGGSSQGHGVAGRR*DLKHGVGCQRIPTL Trigger: CAAAGTGGGAATGCGCTGACAGCCTACGCCATGTTTAAGATCGCAACGCCTGCCCGCTACACCGTGACCTTGGGAGGAACCTCCTTTACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| CDS TCA 90 bp | CTCTTCCATTCTGCCCTGCAAGTACTCCTTGACAGGCGGTGGGGTTaGCATGTAGCCGTGACTTCGCAAATACTTCACGGTAAAGGAGGT | + |
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Preference number: 5 (lower is better) Translates to: LFHSALQVLLDRRWG*HVAVTSQILHGKGG Trigger: ACCTCCTTTACCGTGAAGTATTTGCGAAGTCACGGCTACATGTCAACCCCACCGCCTGTCAAGGAGTACTTGCAGGGCAGAATGGAAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| CDS-3UTR CAA 90 bp | GCCACACATGGTCTTCTGGGTGCAGGACCTGTGGATGTTGTCGCTATACACAAGAGAGATTCCTTTGCTTaGCAAGGCACTGAACAGCAG | + |
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Preference number: 5 (lower is better) Translates to: ATHGLLGAGPVDVVAIHKRDSFA*QGTEQQ Trigger: CTGCTGTTCAGTGCCTTGCAAAGCAAAGGAATCTCT...CTTGTGTATAGCGACAACATCCACAGGTCCTGCACCCAGAAGACCATGTGTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| CDS-3UTR CAA 90 bp | GATGATGGCCTCGTCTTGAACCAAGGAGACACTGAGGACTTCTTGAGGCCAAACCAGCGCATTCCCACTTaGGGAGTTTTTCAGGATGTC | + |
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Preference number: 5 (lower is better) Translates to: DDGLVLNQGDTEDFLRPNQRIPT*GVFQDV Trigger: GACATCCTGAAAAACTCCCAAAGTGGGAATGCGCTG...GTTTGGCCTCAAGAAGTCCTCAGTGTCTCCTTGGTTCAAGACGAGGCCATCATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| CDS GCA 90 bp | AAGCCACTCTGTATTCACCTCTATGCACAAGTAACGGCCCTTTTATaGGCCAATGGTGATCAAAGAGCCTGGCTTTCTGTGCTTCCACGA | + |
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Preference number: 5 (lower is better) Translates to: KPLCIHLYAQVTALL*ANGDQRAWLSVLPR Trigger: TCGTGGAAGCACAGAAAGCCAGGCTCTTTGATCACCATTGGCGCATAAAAGGGCCGTTACTTGTGCATAGAGGTGAATACAGAGTGGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042852.7 ENSMUST00000152193.2 |
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| CDS-3UTR CAA 90 bp | AGCTCACACTGGCCTTTGAAAACAGTAATTCATCTCTTGGTGGTAACAGTTGCATACAGACTGATAGATTaGTCTTGTAAAGGGTCTGTT | + |
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Preference number: 5 (lower is better) Translates to: SSHWPLKTVIHLLVVTVAYRLID*SCKGSV Trigger: AACAGACCCTTTACAAGACAAATCTATCAGTCTGTA...TGCAACTGTTACCACCAAGAGATGAATTACTGTTTTCAAAGGCCAGTGTGAGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| CDS GCA 72 bp | GGTTCCTCCCAAGGTCACGGTGTAGCGGGCAGGCGTTaGGATCTTAAACATGGCGTAGGCTGTCAGCGCATT | + |
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Preference number: 6 (lower is better) Translates to: GSSQGHGVAGRR*DLKHGVGCQRI Trigger: AATGCGCTGACAGCCTACGCCATGTTTAAGATCGCAACGCCTGCCCGCTACACCGTGACCTTGGGAGGAACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| CDS TCA 72 bp | TCTGCCCTGCAAGTACTCCTTGACAGGCGGTGGGGTTaGCATGTAGCCGTGACTTCGCAAATACTTCACGGT | + |
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Preference number: 6 (lower is better) Translates to: SALQVLLDRRWG*HVAVTSQILHG Trigger: ACCGTGAAGTATTTGCGAAGTCACGGCTACATGTCAACCCCACCGCCTGTCAAGGAGTACTTGCAGGGCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| CDS GCA 72 bp | TCTGTGATGAGCTCCTTCGTCTCTTCCATTCTGCCCTaGAAGTACTCCTTGACAGGCGGTGGGGTTGACATG | + |
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Preference number: 6 (lower is better) Translates to: SVMSSFVSSILP*KYSLTGGGVDM Trigger: CATGTCAACCCCACCGCCTGTCAAGGAGTACTTGCAGGGCAGAATGGAAGAGACGAAGGAGCTCATCACAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| CDS GCA 72 bp | TATGCGCCAATGGTGATCAAAGAGCCTGGCTTTCTGTaGTTCCACGAATGTCCTGAGTGCCAGCCGAGACAT | + |
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Preference number: 6 (lower is better) Translates to: YAPMVIKEPGFL*FHECPECQPRH Trigger: ATGTCTCGGCTGGCACTCAGGACATTCGTGGAAGCACAGAAAGCCAGGCTCTTTGATCACCATTGGCGCATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042852.7 ENSMUST00000152193.2 |
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| CDS CAA 90 bp | GGGTCCCCAGCTGAGGCGGCTGAGCATCTAAGAGATTCCTTTGCTTaGCAAGGCACTGAACAGCAGATAAATGTAGCCACTGCTTTCGAA | + |
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Preference number: 6 (lower is better) Translates to: GSPAEAAEHLRDSFA*QGTEQQINVATAFE Trigger: TTCGAAAGCAGTGGCTACATTTATCTGCTGTTCAGTGCCTTGCAAAGCAAAGGAATCTCTTAGATGCTCAGCCGCCTCAGCTGGGGACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042852.7 ENSMUST00000152193.2 |
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| CDS CAA 72 bp | CTTAAACATGGCGTAGGCTGTCAGCGCATTCCCACTTaGGGAGTTTTTCAGGATGTCCACGATACTGTCAGG | + |
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Preference number: 6 (lower is better) Translates to: LKHGVGCQRIPT*GVFQDVHDTVR Trigger: CCTGACAGTATCGTGGACATCCTGAAAAACTCCCAAAGTGGGAATGCGCTGACAGCCTACGCCATGTTTAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042852.7 |
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| CDS CAA 72 bp | GCTGAGGCGGCTGAGCATCTAAGAGATTCCTTTGCTTaGCAAGGCACTGAACAGCAGATAAATGTAGCCACT | + |
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Preference number: 6 (lower is better) Translates to: AEAAEHLRDSFA*QGTEQQINVAT Trigger: AGTGGCTACATTTATCTGCTGTTCAGTGCCTTGCAAAGCAAAGGAATCTCTTAGATGCTCAGCCGCCTCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042852.7 ENSMUST00000152193.2 |
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| CDS CCA 72 bp | TTTCCTGGGATGTGGAACTGGAAGATAAAACCCTCTTaGATAAAATGTCCTGCTCCCATCGTTCCTGGCGAA | + |
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Preference number: 6 (lower is better) Translates to: FPGMWNWKIKPS*IKCPAPIVPGE Trigger: TTCGCCAGGAACGATGGGAGCAGGACATTTTATCCAAGAGGGTTTTATCTTCCAGTTCCACATCCCAGGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042852.7 ENSMUST00000152193.2 |
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