Pregenerated sensors for FAM20C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025854Ensembl transcript IDs: ENSMUST00000026972.8, ENSMUST00000160645.8
Found 151 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCGTGGAGGCTCTGTGCTCAGTGGCTAGGTCGTCCTCCACCACACTaGTCAGCCCGTCCTTCTCCACACAGTCTCGCACAGCCTGCAGCA | + |
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Preference number: 1 (lower is better) Translates to: PWRLCAQWLGRPPPH*SARPSPHSLAQPAA Trigger: TGCTGCAGGCTGTGCGAGACTGTGTGGAGAAGGACGGGCTGAGCAGTGTGGTGGAGGACGACCTAGCCACTGAGCACAGAGCCTCCACGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160645.8 |
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| 3UTR CCA 90 bp | GCTTGTGGTAGGAACGACGCCAGGGGTTCCGCCATGTCTTCCTCTTaGCCAGCGACAGGTCAGGCAGGAAGGCCGCCAGGGATCCTTCGA | + |
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Preference number: 1 (lower is better) Translates to: ACGRNDARGSAMSSS*PATGQAGRPPGILR Trigger: TCGAAGGATCCCTGGCGGCCTTCCTGCCTGACCTGTCGCTGGCCAAGAGGAAGACATGGCGGAACCCCTGGCGTCGTTCCTACCACAAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160645.8 |
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| 3UTR GCA 90 bp | GCTGCCTCACCAGTGGGCAAGAATTCTGCGCCTTCAGCACCTTCATaGGGCCTTCCTCCAGGCAGGGTGGCCACAAAGGAAGGCCTCCAC | + |
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Preference number: 1 (lower is better) Translates to: AASPVGKNSAPSAPS*GLPPGRVATKEGLH Trigger: GTGGAGGCCTTCCTTTGTGGCCACCCTGCCTGGAGGAAGGCCGCATGAAGGTGCTGAAGGCGCAGAATTCTTGCCCACTGGTGAGGCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160645.8 |
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| 3UTR CCA 90 bp | ATGGGCAGCCTGGTCACTACCTCTCCGTGGAGGCTCTGTGCTCAGTaGCTAGGTCGTCCTCCACCACACTGCTCAGCCCGTCCTTCTCCA | + |
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Preference number: 1 (lower is better) Translates to: MGSLVTTSPWRLCAQ*LGRPPPHCSARPSP Trigger: TGGAGAAGGACGGGCTGAGCAGTGTGGTGGAGGACGACCTAGCCACTGAGCACAGAGCCTCCACGGAGAGGTAGTGACCAGGCTGCCCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160645.8 |
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| 3UTR GCA 90 bp | GTTGGGATAGAGGTTCACAGCTGCCTCACCAGTGGGCAAGAATTCTaGGCCTTCAGCACCTTCATGCGGCCTTCCTCCAGGCAGGGTGGC | + |
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Preference number: 1 (lower is better) Translates to: VGIEVHSCLTSGQEF*AFSTFMRPSSRQGG Trigger: GCCACCCTGCCTGGAGGAAGGCCGCATGAAGGTGCTGAAGGCGCAGAATTCTTGCCCACTGGTGAGGCAGCTGTGAACCTCTATCCCAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160645.8 |
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| 3UTR CCA 90 bp | CACATCCCGGATCTCCTTGGTCATGTTGATCATCCTACCAGCCACTaGAGGGACTCTGCGGAAATCCAGGATCCTGTCCAGGTGGAAGGC | + |
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Preference number: 1 (lower is better) Translates to: HIPDLLGHVDHPTSH*RDSAEIQDPVQVEG Trigger: GCCTTCCACCTGGACAGGATCCTGGATTTCCGCAGAGTCCCTCCAGTGGCTGGTAGGATGATCAACATGACCAAGGAGATCCGGGATGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160645.8 |
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| 3UTR CCA 90 bp | GGGATCCTTCGATCTGGTCGGGCCTCCCACACAGGGCATGCTCGGTaGAACAGTAGTAGGAACACTCCCCGTAGAAACAGATGTTGTTGG | + |
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Preference number: 1 (lower is better) Translates to: GILRSGRASHTGHAR*NSSRNTPRRNRCCW Trigger: CCAACAACATCTGTTTCTACGGGGAGTGTTCCTACTACTGTTCCACCGAGCATGCCCTGTGTGGGAGGCCCGACCAGATCGAAGGATCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160645.8 |
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| 3UTR CCA 90 bp | CTGCAAACTACTCCACAAAAATGTCCCAAGGCTGGCCTGCTGGCCTaGGGCCAATGGGCTCTGTGTAGTGTCTTGACACCCATCGTCCAA | + |
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Preference number: 1 (lower is better) Translates to: LQTTPQKCPKAGLLA*GQWALCSVLTPIVQ Trigger: TTGGACGATGGGTGTCAAGACACTACACAGAGCCCATTGGCCCCAGGCCAGCAGGCCAGCCTTGGGACATTTTTGTGGAGTAGTTTGCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026972.8 |
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| 3UTR CCA 90 bp | GGTCATATCCATGATGTCCAGGATTCGGTGGCCACTGTCGTAGGGTaGCGTCTGCTTCACCTCCTCACAGTAATCAGGGTCGACTTCCCA | + |
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Preference number: 1 (lower is better) Translates to: GHIHDVQDSVATVVG*RLLHLLTVIRVDFP Trigger: TGGGAAGTCGACCCTGATTACTGTGAGGAGGTGAAGCAGACGCCACCCTACGACAGTGGCCACCGAATCCTGGACATCATGGATATGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160645.8 |
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| 3UTR TCA 90 bp | GTTCCTCTTTGGCCAGCAGCTGCAGTCTCAGGTAGGTGGACCTCCTaGTCCTGCAGCACTGATGAAGAGGAGCGAGAATGGAAAGCTCAT | + |
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Preference number: 1 (lower is better) Translates to: VPLWPAAAVSGRWTS*SCSTDEEEREWKAH Trigger: ATGAGCTTTCCATTCTCGCTCCTCTTCATCAGTGCTGCAGGATCAGGAGGTCCACCTACCTGAGACTGCAGCTGCTGGCCAAAGAGGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160645.8 |
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| 3UTR TCA 90 bp | ATAGCTTCTTATCCCGCGTCACATCCCGGATCTCCTTGGTCATGTTaGTCATCCTACCAGCCACTGGAGGGACTCTGCGGAAATCCAGGA | + |
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Preference number: 1 (lower is better) Translates to: IASYPASHPGSPWSC*SSYQPLEGLCGNPG Trigger: TCCTGGATTTCCGCAGAGTCCCTCCAGTGGCTGGTAGGATGATCAACATGACCAAGGAGATCCGGGATGTGACGCGGGATAAGAAGCTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160645.8 |
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| 3UTR GCA 90 bp | GCGCTGGCCACTCTGCTGCATGTTCAGAGTGCTTTGTCTGGTTTCTaGTGGAATTGGAGGCCCATACATCCCTATCAGAACCATGAGGGA | + |
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Preference number: 1 (lower is better) Translates to: ALATLLHVQSALSGF*WNWRPIHPYQNHEG Trigger: TCCCTCATGGTTCTGATAGGGATGTATGGGCCTCCAATTCCAGCAGAAACCAGACAAAGCACTCTGAACATGCAGCAGAGTGGCCAGCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026972.8 |
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| 3UTR TCA 90 bp | CCTGCAGCACTGATGAAGAGGAGCGAGAATGGAAAGCTCATCGTGTaGGTATTTCCCAAACCCGCGCCCGTTGTCCAAGTGGATGATGAA | + |
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Preference number: 1 (lower is better) Translates to: PAALMKRSENGKLIV*VFPKPAPVVQVDDE Trigger: TTCATCATCCACTTGGACAACGGGCGCGGGTTTGGGAAATACTCACACGATGAGCTTTCCATTCTCGCTCCTCTTCATCAGTGCTGCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160645.8 |
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| 3UTR GCA 90 bp | GATGCCAATGTGGAATTTGAGCCAGTTGGGATAGAGGTTCACAGCTaGCTCACCAGTGGGCAAGAATTCTGCGCCTTCAGCACCTTCATG | + |
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Preference number: 1 (lower is better) Translates to: DANVEFEPVGIEVHS*LTSGQEFCAFSTFM Trigger: CATGAAGGTGCTGAAGGCGCAGAATTCTTGCCCACTGGTGAGGCAGCTGTGAACCTCTATCCCAACTGGCTCAAATTCCACATTGGCATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160645.8 |
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| 3UTR CCA 90 bp | CTGGCCACTCTGCTGCATGTTCAGAGTGCTTTGTCTGGTTTCTGCTaGAATTGGAGGCCCATACATCCCTATCAGAACCATGAGGGAGAC | + |
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Preference number: 1 (lower is better) Translates to: LATLLHVQSALSGFC*NWRPIHPYQNHEGD Trigger: GTCTCCCTCATGGTTCTGATAGGGATGTATGGGCCTCCAATTCCAGCAGAAACCAGACAAAGCACTCTGAACATGCAGCAGAGTGGCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026972.8 |
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| 3UTR CCA 90 bp | ACTCTGCTGCATGTTCAGAGTGCTTTGTCTGGTTTCTGCTGGAATTaGAGGCCCATACATCCCTATCAGAACCATGAGGGAGACCCCATG | + |
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Preference number: 1 (lower is better) Translates to: TLLHVQSALSGFCWN*RPIHPYQNHEGDPM Trigger: CATGGGGTCTCCCTCATGGTTCTGATAGGGATGTATGGGCCTCCAATTCCAGCAGAAACCAGACAAAGCACTCTGAACATGCAGCAGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026972.8 |
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| 3UTR CCA 90 bp | AGAAGGTCCTTGAAGTGGCTCAGAGGTTATCTCTGGTCTGCTGGATaGTTCTCCATTAACAGGAGTGTGAGCCTTTTGTTAAGTACAAAA | + |
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Preference number: 1 (lower is better) Translates to: RRSLKWLRGYLWSAG*FSINRSVSLLLSTK Trigger: TTTTGTACTTAACAAAAGGCTCACACTCCTGTTAATGGAGAACCATCCAGCAGACCAGAGATAACCTCTGAGCCACTTCAAGGACCTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026972.8 |
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| 3UTR-3UTR TCA 90 bp | CCGCCAGGGATCCTTCGATCTGGTCGGGCCTCCCACACAGGGCATGCTCGGTGGACGCTGGTGATCTTCTaGGAGCCGAGGTCCCGCAGT | + |
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Preference number: 2 (lower is better) Translates to: PPGILRSGRASHTGHARWTLVIF*EPRSRS Trigger: ACTGCGGGACCTCGGCTCTCAGAAGATCACCAGCGT...CCACCGAGCATGCCCTGTGTGGGAGGCCCGACCAGATCGAAGGATCCCTGGCGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160645.8 |
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| 3UTR-3UTR CCA 90 bp | CCGCCAGGGATCCTTCGATCTGGTCGGGCCTCCCACACAGGGCATGCTCGGTGGTTCCTCCAGGCAGGGTaGCCACAAAGGAAGGCCTCC | + |
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Preference number: 2 (lower is better) Translates to: PPGILRSGRASHTGHARWFLQAG*PQRKAS Trigger: GGAGGCCTTCCTTTGTGGCCACCCTGCCTGGAGGAA...CCACCGAGCATGCCCTGTGTGGGAGGCCCGACCAGATCGAAGGATCCCTGGCGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160645.8 |
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| 3UTR-3UTR TCA 90 bp | GGGTGGCGTCTGCTTCACCTCCTCACAGTAATCAGGGTCGACTTCCCACTCTGCCAGCTGCGTGCCCCCTaGCTTCATGGCGACGCTGGT | + |
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Preference number: 2 (lower is better) Translates to: GWRLLHLLTVIRVDFPLCQLRAP*LHGDAG Trigger: ACCAGCGTCGCCATGAAGTCAGGGGGCACGCAGCTG...GCAGAGTGGGAAGTCGACCCTGATTACTGTGAGGAGGTGAAGCAGACGCCACCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160645.8 |
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| 3UTR-3UTR GCA 90 bp | GATGTCCAGGATTCGGTGGCCACTGTCGTAGGGTGGCGTCTGCTTCACCTCCTCCCTTCAGCACCTTCATaGGGCCTTCCTCCAGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: DVQDSVATVVGWRLLHLLPSAPS*GLPPGR Trigger: CCTGCCTGGAGGAAGGCCGCATGAAGGTGCTGAAGG...GAGGAGGTGAAGCAGACGCCACCCTACGACAGTGGCCACCGAATCCTGGACATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160645.8 |
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| 3UTR-3UTR GCA 90 bp | CGCCAGGGATCCTTCGATCTGGTCGGGCCTCCCACACAGGGCATGCTCGGTGGAATGATGAGCTTCAGCTaGGTGCCCCCTGACTTCATG | + |
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Preference number: 2 (lower is better) Translates to: RQGSFDLVGPPTQGMLGGMMSFS*VPPDFM Trigger: CATGAAGTCAGGGGGCACGCAGCTGAAGCTCATCAT...TCCACCGAGCATGCCCTGTGTGGGAGGCCCGACCAGATCGAAGGATCCCTGGCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160645.8 |
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| 3UTR-3UTR CCA 90 bp | TCCACACAGTCTCGCACAGCCTGCAGCACTATGCGCAACCGCCGGTCCAGGGCCTGGCTGGGTTGTGTCTaGAGTACAGCTCATACCGGT | + |
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Preference number: 2 (lower is better) Translates to: STQSRTACSTMRNRRSRAWLGCV*STAHTG Trigger: ACCGGTATGAGCTGTACTCCAGACACAACCCAGCCA...GGCCCTGGACCGGCGGTTGCGCATAGTGCTGCAGGCTGTGCGAGACTGTGTGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160645.8 |
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| 3UTR-3UTR TCA 90 bp | CAGTCTCGCACAGCCTGCAGCACTATGCGCAACCGCCGGTCCAGGGCCTCCAGATCTCCTTGGTCATGTTaGTCATCCTACCAGCCACTG | + |
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Preference number: 2 (lower is better) Translates to: QSRTACSTMRNRRSRASRSPWSC*SSYQPL Trigger: CAGTGGCTGGTAGGATGATCAACATGACCAAGGAGA...TCTGGAGGCCCTGGACCGGCGGTTGCGCATAGTGCTGCAGGCTGTGCGAGACTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160645.8 |
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| 3UTR-3UTR CCA 90 bp | CTGGTAGAGCACGGGTGCCACCTTGTCATGCTGCAGGGACTCGGCCATCAGCAGGCAGTAAGGCATCGATaGCTGGGTTGTGTCTGGAGT | + |
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Preference number: 2 (lower is better) Translates to: LVEHGCHLVMLQGLGHQQAVRHR*LGCVWS Trigger: ACTCCAGACACAACCCAGCCATCGATGCCTTACTGC...CTGCTGATGGCCGAGTCCCTGCAGCATGACAAGGTGGCACCCGTGCTCTACCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160645.8 |
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| 3UTR-3UTR TCA 90 bp | CAGTGGCTAGGTCGTCCTCCACCACACTGCTCAGCCCGTCCTTCTCCACACAGTTCTGCTTCATGGGTTTaGATAGCGCCTGCCCGTAAT | + |
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Preference number: 2 (lower is better) Translates to: QWLGRPPPHCSARPSPHSSASWV*IAPARN Trigger: ATTACGGGCAGGCGCTATTCAAACCCATGAAGCAGA...ACTGTGTGGAGAAGGACGGGCTGAGCAGTGTGGTGGAGGACGACCTAGCCACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160645.8 |
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| 3UTR-3UTR CCA 90 bp | GGCCATCAGCAGGCTCAGTTTGTGTTCCTCTTTGGCCAGCAGCTGCAGTCTCAGCAGCTGCCTCACCAGTaGGCAAGAATTCTGCGCCTT | + |
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Preference number: 2 (lower is better) Translates to: GHQQAQFVFLFGQQLQSQQLPHQ*ARILRL Trigger: AAGGCGCAGAATTCTTGCCCACTGGTGAGGCAGCTG...CTGAGACTGCAGCTGCTGGCCAAAGAGGAACACAAACTGAGCCTGCTGATGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160645.8 |
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| 3UTR CAA 90 bp | CATAGCTTCTTATCCCGCGTCACATCCCGGATCTCCTTGGTCATGTaGATCATCCTACCAGCCACTGGAGGGACTCTGCGGAAATCCAGG | + |
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Preference number: 2 (lower is better) Translates to: HSFLSRVTSRISLVM*IILPATGGTLRKSR Trigger: CCTGGATTTCCGCAGAGTCCCTCCAGTGGCTGGTAGGATGATCAACATGACCAAGGAGATCCGGGATGTGACGCGGGATAAGAAGCTATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160645.8 |
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| 3UTR-3UTR TCA 90 bp | TCTGAGAGCCGAGGTCCCGCAGTAAGGCATCGATGGCTGGGTTGTGTCTGGAGTTGCCAATGTGGAATTTaGGCCAGTTGGGATAGAGGT | + |
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Preference number: 2 (lower is better) Translates to: SESRGPAVRHRWLGCVWSCQCGI*ASWDRG Trigger: ACCTCTATCCCAACTGGCTCAAATTCCACATTGGCA...ACTCCAGACACAACCCAGCCATCGATGCCTTACTGCGGGACCTCGGCTCTCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160645.8 |
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| 3UTR-3UTR GCA 90 bp | GGACAAGTGCATAGCTGGTCATTGGTATCCAAAAACCCATTCTTGGGTGCCCATATGAGGGAGACCCCATaGTCCCTGCCGCAGGTCACC | + |
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Preference number: 2 (lower is better) Translates to: GQVHSWSLVSKNPFLGAHMRETP*SLPQVT Trigger: GGTGACCTGCGGCAGGGAGCATGGGGTCTCCCTCAT...ATGGGCACCCAAGAATGGGTTTTTGGATACCAATGACCAGCTATGCACTTGTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026972.8 |
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| 3UTR CAA 90 bp | AAAGTTCTCCATAGCTTCTTATCCCGCGTCACATCCCGGATCTCCTaGGTCATGTTGATCATCCTACCAGCCACTGGAGGGACTCTGCGG | + |
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Preference number: 2 (lower is better) Translates to: KVLHSFLSRVTSRIS*VMLIILPATGGTLR Trigger: CCGCAGAGTCCCTCCAGTGGCTGGTAGGATGATCAACATGACCAAGGAGATCCGGGATGTGACGCGGGATAAGAAGCTATGGAGAACTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160645.8 |
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| 3UTR-3UTR TCA 90 bp | CAGAGTGCTTTGTCTGGTTTCTGCTGGAATTGGAGGCCCATACATCCCTATCAGGTCACCCTATGGGGATaGCCGATCCCGTCCGAATTC | + |
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Preference number: 2 (lower is better) Translates to: QSALSGFCWNWRPIHPYQVTLWG*PIPSEF Trigger: GAATTCGGACGGGATCGGTCATCCCCATAGGGTGAC...CTGATAGGGATGTATGGGCCTCCAATTCCAGCAGAAACCAGACAAAGCACTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026972.8 |
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| 3UTR-3UTR CCA 90 bp | GGCCATCAGCAGGCTCAGTTTGTGTTCCTCTTTGGCCAGCAGCTGCAGTCTCAGCGGTTGATGCCAATGTaGAATTTGAGCCAGTTGGGA | + |
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Preference number: 2 (lower is better) Translates to: GHQQAQFVFLFGQQLQSQRLMPM*NLSQLG Trigger: TCCCAACTGGCTCAAATTCCACATTGGCATCAACCG...CTGAGACTGCAGCTGCTGGCCAAAGAGGAACACAAACTGAGCCTGCTGATGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160645.8 |
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| 3UTR-3UTR TCA 90 bp | TGCATAGCTGGTCATTGGTATCCAAAAACCCATTCTTGGGTGCCCATCTGCTCCGAGCTCTACAGTCTTTaGGAGAGGAGGCCCCAGGAT | + |
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Preference number: 2 (lower is better) Translates to: CIAGHWYPKTHSWVPICSELYSL*ERRPQD Trigger: ATCCTGGGGCCTCCTCTCTCAAAGACTGTAGAGCTC...GGAGCAGATGGGCACCCAAGAATGGGTTTTTGGATACCAATGACCAGCTATGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026972.8 |
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| 3UTR CAA 90 bp | AGAATGGAAAGCTCATCGTGTGAGTATTTCCCAAACCCGCGCCCGTaGTCCAAGTGGATGATGAAGGTCTCATTCCCGAACTTCTCAAAG | + |
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Preference number: 2 (lower is better) Translates to: RMESSSCEYFPNPRP*SKWMMKVSFPNFSK Trigger: CTTTGAGAAGTTCGGGAATGAGACCTTCATCATCCACTTGGACAACGGGCGCGGGTTTGGGAAATACTCACACGATGAGCTTTCCATTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160645.8 |
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| 3UTR-3UTR GCA 90 bp | GCAGCAGCGGACAAGTGCATAGCTGGTCATTGGTATCCAAAAACCCATTCTTGGGCTGCATGTTCAGAGTaGTTTGTCTGGTTTCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: AAADKCIAGHWYPKTHSWAACSE*FVWFLL Trigger: CAGCAGAAACCAGACAAAGCACTCTGAACATGCAGC...CCAAGAATGGGTTTTTGGATACCAATGACCAGCTATGCACTTGTCCGCTGCTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026972.8 |
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| 3UTR-3UTR CCA 90 bp | AGCTGGTCATTGGTATCCAAAAACCCATTCTTGGGTGCCCATCTGCTCCGACACTCAGAGTGCTTTGTCTaGTTTCTGCTGGAATTGGAG | + |
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Preference number: 2 (lower is better) Translates to: SWSLVSKNPFLGAHLLRHSECFV*FLLELE Trigger: CTCCAATTCCAGCAGAAACCAGACAAAGCACTCTGA...GTGTCGGAGCAGATGGGCACCCAAGAATGGGTTTTTGGATACCAATGACCAGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026972.8 |
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| 3UTR-3UTR CCA 90 bp | GCAGCAGCGGACAAGTGCATAGCTGGTCATTGGTATCCAAAAACCCATTCTTGGCTCTGGTCTGCTGGATaGTTCTCCATTAACAGGAGT | + |
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Preference number: 2 (lower is better) Translates to: AAADKCIAGHWYPKTHSWLWSAG*FSINRS Trigger: ACTCCTGTTAATGGAGAACCATCCAGCAGACCAGAG...CCAAGAATGGGTTTTTGGATACCAATGACCAGCTATGCACTTGTCCGCTGCTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026972.8 |
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| 3UTR-3UTR GCA 90 bp | GAGCCATGGCACACGCTTGCTGTATCTTTATTGCACTGTTATCTCACTGCAAACGCTTTGTCTGGTTTCTaGTGGAATTGGAGGCCCATA | + |
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Preference number: 2 (lower is better) Translates to: EPWHTLAVSLLHCYLTANALSGF*WNWRPI Trigger: TATGGGCCTCCAATTCCAGCAGAAACCAGACAAAGC...GTTTGCAGTGAGATAACAGTGCAATAAAGATACAGCAAGCGTGTGCCATGGCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026972.8 |
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| 3UTR-3UTR CCA 90 bp | GCCATGGCACACGCTTGCTGTATCTTTATTGCACTGTTATCTCACTGCAAACTACTCAGAGGTTATCTCTaGTCTGCTGGATGGTTCTCC | + |
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Preference number: 2 (lower is better) Translates to: AMAHACCIFIALLSHCKLLRGYL*SAGWFS Trigger: GGAGAACCATCCAGCAGACCAGAGATAACCTCTGAG...TAGTTTGCAGTGAGATAACAGTGCAATAAAGATACAGCAAGCGTGTGCCATGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026972.8 |
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| 3UTR GCA 72 bp | CTCAGCCCGTCCTTCTCCACACAGTCTCGCACAGCCTaGAGCACTATGCGCAACCGCCGGTCCAGGGCCTCC | + |
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Preference number: 3 (lower is better) Translates to: LSPSFSTQSRTA*STMRNRRSRAS Trigger: GGAGGCCCTGGACCGGCGGTTGCGCATAGTGCTGCAGGCTGTGCGAGACTGTGTGGAGAAGGACGGGCTGAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160645.8 |
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| 3UTR CCA 72 bp | AGGAACGACGCCAGGGGTTCCGCCATGTCTTCCTCTTaGCCAGCGACAGGTCAGGCAGGAAGGCCGCCAGGG | + |
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Preference number: 3 (lower is better) Translates to: RNDARGSAMSSS*PATGQAGRPPG Trigger: CCCTGGCGGCCTTCCTGCCTGACCTGTCGCTGGCCAAGAGGAAGACATGGCGGAACCCCTGGCGTCGTTCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160645.8 |
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| 3UTR CCA 72 bp | AGGTCAGGCAGGAAGGCCGCCAGGGATCCTTCGATCTaGTCGGGCCTCCCACACAGGGCATGCTCGGTGGAA | + |
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Preference number: 3 (lower is better) Translates to: RSGRKAARDPSI*SGLPHRACSVE Trigger: TTCCACCGAGCATGCCCTGTGTGGGAGGCCCGACCAGATCGAAGGATCCCTGGCGGCCTTCCTGCCTGACCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160645.8 |
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| 3UTR CCA 72 bp | CTGGTCACTACCTCTCCGTGGAGGCTCTGTGCTCAGTaGCTAGGTCGTCCTCCACCACACTGCTCAGCCCGT | + |
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Preference number: 3 (lower is better) Translates to: LVTTSPWRLCAQ*LGRPPPHCSAR Trigger: ACGGGCTGAGCAGTGTGGTGGAGGACGACCTAGCCACTGAGCACAGAGCCTCCACGGAGAGGTAGTGACCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160645.8 |
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| 3UTR TCA 72 bp | TGCTGGCCTGGGGCCAATGGGCTCTGTGTAGTGTCTTaGCACCCATCGTCCAAAGCTCAGCCAAGGCAGGCG | + |
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Preference number: 3 (lower is better) Translates to: CWPGANGLCVVS*HPSSKAQPRQA Trigger: CGCCTGCCTTGGCTGAGCTTTGGACGATGGGTGTCAAGACACTACACAGAGCCCATTGGCCCCAGGCCAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026972.8 |
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| 3UTR TCA 72 bp | GTGCCCCCTGACTTCATGGCGACGCTGGTGATCTTCTaGGAGCCGAGGTCCCGCAGTAAGGCATCGATGGCT | + |
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Preference number: 3 (lower is better) Translates to: VPPDFMATLVIF*EPRSRSKASMA Trigger: AGCCATCGATGCCTTACTGCGGGACCTCGGCTCTCAGAAGATCACCAGCGTCGCCATGAAGTCAGGGGGCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160645.8 |
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| 3UTR TCA 72 bp | TCAGCTGCGTGCCCCCTGACTTCATGGCGACGCTGGTaGTCTTCTGAGAGCCGAGGTCCCGCAGTAAGGCAT | + |
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Preference number: 3 (lower is better) Translates to: SAACPLTSWRRW*SSESRGPAVRH Trigger: ATGCCTTACTGCGGGACCTCGGCTCTCAGAAGATCACCAGCGTCGCCATGAAGTCAGGGGGCACGCAGCTGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160645.8 |
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| 3UTR GCA 72 bp | CTCTGTGCTCAGTGGCTAGGTCGTCCTCCACCACACTaGTCAGCCCGTCCTTCTCCACACAGTCTCGCACAG | + |
|
Preference number: 3 (lower is better) Translates to: LCAQWLGRPPPH*SARPSPHSLAQ Trigger: CTGTGCGAGACTGTGTGGAGAAGGACGGGCTGAGCAGTGTGGTGGAGGACGACCTAGCCACTGAGCACAGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160645.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTCCTCTTGGCCAGCGACAGGTCAGGCAGGAAGGCCGCCAGGGATCCTTCGATGCATCGATGGCTGGGTaGTGTCTGGAGTACAGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: LPLGQRQVRQEGRQGSFDASMAG*CLEYSS Trigger: TGAGCTGTACTCCAGACACAACCCAGCCATCGATGC...ATCGAAGGATCCCTGGCGGCCTTCCTGCCTGACCTGTCGCTGGCCAAGAGGAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160645.8 |
||
| 3UTR TCA 72 bp | CTGGAATTGGAGGCCCATACATCCCTATCAGAACCATaGGGGAGACCCCATGCTCCCTGCCGCAGGTCACCC | + |
|
Preference number: 3 (lower is better) Translates to: LELEAHTSLSEP*GRPHAPCRRSP Trigger: GGGTGACCTGCGGCAGGGAGCATGGGGTCTCCCTCATGGTTCTGATAGGGATGTATGGGCCTCCAATTCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026972.8 |
||
| 3UTR GCA 72 bp | CCAGTGGGCAAGAATTCTGCGCCTTCAGCACCTTCATaGGGCCTTCCTCCAGGCAGGGTGGCCACAAAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: PVGKNSAPSAPS*GLPPGRVATKE Trigger: TTCCTTTGTGGCCACCCTGCCTGGAGGAAGGCCGCATGAAGGTGCTGAAGGCGCAGAATTCTTGCCCACTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160645.8 |
||
| 3UTR TCA 72 bp | ACCCCATGCTCCCTGCCGCAGGTCACCCTATGGGGATaGCCGATCCCGTCCGAATTCACTGAATTCACAGGT | + |
|
Preference number: 3 (lower is better) Translates to: TPCSLPQVTLWG*PIPSEFTEFTG Trigger: ACCTGTGAATTCAGTGAATTCGGACGGGATCGGTCATCCCCATAGGGTGACCTGCGGCAGGGAGCATGGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026972.8 |
||
| 3UTR TCA 72 bp | CTGGAAGGTCATGATGAGCTTCAGCTGCGTGCCCCCTaGCTTCATGGCGACGCTGGTGATCTTCTGAGAGCC | + |
|
Preference number: 3 (lower is better) Translates to: LEGHDELQLRAP*LHGDAGDLLRA Trigger: GGCTCTCAGAAGATCACCAGCGTCGCCATGAAGTCAGGGGGCACGCAGCTGAAGCTCATCATGACCTTCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160645.8 |
||
| 3UTR CCA 72 bp | CGATCTGGTCGGGCCTCCCACACAGGGCATGCTCGGTaGAACAGTAGTAGGAACACTCCCCGTAGAAACAGA | + |
|
Preference number: 3 (lower is better) Translates to: RSGRASHTGHAR*NSSRNTPRRNR Trigger: TCTGTTTCTACGGGGAGTGTTCCTACTACTGTTCCACCGAGCATGCCCTGTGTGGGAGGCCCGACCAGATCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160645.8 |
||
| 3UTR CCA 72 bp | ACTCGGCCATCAGCAGGCTCAGTTTGTGTTCCTCTTTaGCCAGCAGCTGCAGTCTCAGGTAGGTGGACCTCC | + |
|
Preference number: 3 (lower is better) Translates to: TRPSAGSVCVPL*PAAAVSGRWTS Trigger: GGAGGTCCACCTACCTGAGACTGCAGCTGCTGGCCAAAGAGGAACACAAACTGAGCCTGCTGATGGCCGAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160645.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTCAGTGGCTAGGTCGTCCTCCACCACACTGCTCAGCCCGTCCTTCTCCACACATCTCCTTGGTCATGTaGATCATCCTACCAGCCACT | + |
|
Preference number: 3 (lower is better) Translates to: AQWLGRPPPHCSARPSPHISLVM*IILPAT Trigger: AGTGGCTGGTAGGATGATCAACATGACCAAGGAGAT...GTGTGGAGAAGGACGGGCTGAGCAGTGTGGTGGAGGACGACCTAGCCACTGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160645.8 |
||
| 3UTR TCA 72 bp | TATCCCGCGTCACATCCCGGATCTCCTTGGTCATGTTaGTCATCCTACCAGCCACTGGAGGGACTCTGCGGA | + |
|
Preference number: 3 (lower is better) Translates to: YPASHPGSPWSC*SSYQPLEGLCG Trigger: TCCGCAGAGTCCCTCCAGTGGCTGGTAGGATGATCAACATGACCAAGGAGATCCGGGATGTGACGCGGGATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160645.8 |
||
| 3UTR GCA 72 bp | CTCCCTATGGGAAGGACGGAGCGCTGGCCACTCTGCTaGATGTTCAGAGTGCTTTGTCTGGTTTCTGCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: LPMGRTERWPLC*MFRVLCLVSAG Trigger: TCCAGCAGAAACCAGACAAAGCACTCTGAACATGCAGCAGAGTGGCCAGCGCTCCGTCCTTCCCATAGGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026972.8 |
||
| 3UTR GCA 72 bp | TCCCTCCCTATGGGAAGGACGGAGCGCTGGCCACTCTaGTGCATGTTCAGAGTGCTTTGTCTGGTTTCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: SLPMGRTERWPL*CMFRVLCLVSA Trigger: AGCAGAAACCAGACAAAGCACTCTGAACATGCAGCAGAGTGGCCAGCGCTCCGTCCTTCCCATAGGGAGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026972.8 |
||
| 3UTR GCA 72 bp | CACCTCCTCACAGTAATCAGGGTCGACTTCCCACTCTaGCTTCTTTCGCTTGTGGTAGGAACGACGCCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: HLLTVIRVDFPL*LLSLVVGTTPG Trigger: CCCTGGCGTCGTTCCTACCACAAGCGAAAGAAGGCAGAGTGGGAAGTCGACCCTGATTACTGTGAGGAGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160645.8 |
||
| 3UTR CCA 72 bp | GCCAGTTGGGATAGAGGTTCACAGCTGCCTCACCAGTaGGCAAGAATTCTGCGCCTTCAGCACCTTCATGCG | + |
|
Preference number: 3 (lower is better) Translates to: ASWDRGSQLPHQ*ARILRLQHLHA Trigger: CGCATGAAGGTGCTGAAGGCGCAGAATTCTTGCCCACTGGTGAGGCAGCTGTGAACCTCTATCCCAACTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160645.8 |
||
| 3UTR CCA 72 bp | TCTTCTGAGAGCCGAGGTCCCGCAGTAAGGCATCGATaGCTGGGTTGTGTCTGGAGTACAGCTCATACCGGT | + |
|
Preference number: 3 (lower is better) Translates to: SSESRGPAVRHR*LGCVWSTAHTG Trigger: ACCGGTATGAGCTGTACTCCAGACACAACCCAGCCATCGATGCCTTACTGCGGGACCTCGGCTCTCAGAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160645.8 |
||
| 3UTR CCA 72 bp | CATGATGTCCAGGATTCGGTGGCCACTGTCGTAGGGTaGCGTCTGCTTCACCTCCTCACAGTAATCAGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: HDVQDSVATVVG*RLLHLLTVIRV Trigger: GACCCTGATTACTGTGAGGAGGTGAAGCAGACGCCACCCTACGACAGTGGCCACCGAATCCTGGACATCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160645.8 |
||
| 3UTR TCA 72 bp | CATCGCTGTCTCCCCTTCCTAGAGCTCTACAGTCTTTaGGAGAGGAGGCCCCAGGATAGAGGAGCAGAAGGT | + |
|
Preference number: 3 (lower is better) Translates to: HRCLPFLELYSL*ERRPQDRGAEG Trigger: ACCTTCTGCTCCTCTATCCTGGGGCCTCCTCTCTCAAAGACTGTAGAGCTCTAGGAAGGGGAGACAGCGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026972.8 |
||
| 3UTR GCA 72 bp | TGCAAACTACTCCACAAAAATGTCCCAAGGCTGGCCTaGTGGCCTGGGGCCAATGGGCTCTGTGTAGTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: CKLLHKNVPRLA*WPGANGLCVVS Trigger: AGACACTACACAGAGCCCATTGGCCCCAGGCCAGCAGGCCAGCCTTGGGACATTTTTGTGGAGTAGTTTGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026972.8 |
||
| 3UTR GCA 72 bp | GTGGAATTTGAGCCAGTTGGGATAGAGGTTCACAGCTaGCTCACCAGTGGGCAAGAATTCTGCGCCTTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: VEFEPVGIEVHS*LTSGQEFCAFS Trigger: GCTGAAGGCGCAGAATTCTTGCCCACTGGTGAGGCAGCTGTGAACCTCTATCCCAACTGGCTCAAATTCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160645.8 |
||
| 3UTR CCA 72 bp | GGCCCCAGGATAGAGGAGCAGAAGGTGGGTTGTAATTaGGGGCCAGAGTGTGATCACATCATAGAAGGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: GPRIEEQKVGCN*GPECDHIIEGP Trigger: AGGACCTTCTATGATGTGATCACACTCTGGCCCCCAATTACAACCCACCTTCTGCTCCTCTATCCTGGGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026972.8 |
||
| 3UTR-3UTR CAA 90 bp | TACCAGCCACTGGAGGGACTCTGCGGAAATCCAGGATCCTGTCCAGGTGGAAGGTACAGCTCATACCGGTaGATGCCAATGTGGAATTTG | + |
|
Preference number: 3 (lower is better) Translates to: YQPLEGLCGNPGSCPGGRYSSYR*MPMWNL Trigger: CAAATTCCACATTGGCATCAACCGGTATGAGCTGTA...CCTTCCACCTGGACAGGATCCTGGATTTCCGCAGAGTCCCTCCAGTGGCTGGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160645.8 |
||
| 3UTR TCA 72 bp | CTGATGAAGAGGAGCGAGAATGGAAAGCTCATCGTGTaGGTATTTCCCAAACCCGCGCCCGTTGTCCAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: LMKRSENGKLIV*VFPKPAPVVQV Trigger: CACTTGGACAACGGGCGCGGGTTTGGGAAATACTCACACGATGAGCTTTCCATTCTCGCTCCTCTTCATCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160645.8 |
||
| 3UTR GCA 72 bp | CATTGGTATCCAAAAACCCATTCTTGGGTGCCCATCTaGTCCGACACAGGCCATGATGTCCATCGCTGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: HWYPKTHSWVPI*SDTGHDVHRCL Trigger: GAGACAGCGATGGACATCATGGCCTGTGTCGGAGCAGATGGGCACCCAAGAATGGGTTTTTGGATACCAATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026972.8 |
||
| 3UTR CCA 72 bp | TGCTCTGCAGCAGCGGACAAGTGCATAGCTGGTCATTaGTATCCAAAAACCCATTCTTGGGTGCCCATCTGC | + |
|
Preference number: 3 (lower is better) Translates to: CSAAADKCIAGH*YPKTHSWVPIC Trigger: GCAGATGGGCACCCAAGAATGGGTTTTTGGATACCAATGACCAGCTATGCACTTGTCCGCTGCTGCAGAGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026972.8 |
||
| 3UTR TCA 72 bp | TGGGGGCCAGAGTGTGATCACATCATAGAAGGTCCTTaGAGTGGCTCAGAGGTTATCTCTGGTCTGCTGGAT | + |
|
Preference number: 3 (lower is better) Translates to: WGPECDHIIEGP*SGSEVISGLLD Trigger: ATCCAGCAGACCAGAGATAACCTCTGAGCCACTTCAAGGACCTTCTATGATGTGATCACACTCTGGCCCCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026972.8 |
||
| 3UTR GCA 72 bp | ACTCTGCTGCATGTTCAGAGTGCTTTGTCTGGTTTCTaGTGGAATTGGAGGCCCATACATCCCTATCAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: TLLHVQSALSGF*WNWRPIHPYQN Trigger: GTTCTGATAGGGATGTATGGGCCTCCAATTCCAGCAGAAACCAGACAAAGCACTCTGAACATGCAGCAGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026972.8 |
||
| 3UTR CCA 72 bp | CTGCTGCATGTTCAGAGTGCTTTGTCTGGTTTCTGCTaGAATTGGAGGCCCATACATCCCTATCAGAACCAT | + |
|
Preference number: 3 (lower is better) Translates to: LLHVQSALSGFC*NWRPIHPYQNH Trigger: ATGGTTCTGATAGGGATGTATGGGCCTCCAATTCCAGCAGAAACCAGACAAAGCACTCTGAACATGCAGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026972.8 |
||
| 3UTR-3UTR CAA 90 bp | AGTAGTAGGAACACTCCCCGTAGAAACAGATGTTGTTGGCTGGAGACACAAAGAACATCCCGGATCTCCTaGGTCATGTTGATCATCCTA | + |
|
Preference number: 3 (lower is better) Translates to: SSRNTPRRNRCCWLETQRTSRIS*VMLIIL Trigger: TAGGATGATCAACATGACCAAGGAGATCCGGGATGT...TCTTTGTGTCTCCAGCCAACAACATCTGTTTCTACGGGGAGTGTTCCTACTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160645.8 |
||
| 3UTR CCA 72 bp | TTGAAGTGGCTCAGAGGTTATCTCTGGTCTGCTGGATaGTTCTCCATTAACAGGAGTGTGAGCCTTTTGTTA | + |
|
Preference number: 3 (lower is better) Translates to: LKWLRGYLWSAG*FSINRSVSLLL Trigger: TAACAAAAGGCTCACACTCCTGTTAATGGAGAACCATCCAGCAGACCAGAGATAACCTCTGAGCCACTTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026972.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCTGTATCTTTATTGCACTGTTATCTCACTGCAAACTACTCCACAAAAATGTCCATGTTCAGAGTGCTTaGTCTGGTTTCTGCTGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: CCIFIALLSHCKLLHKNVHVQSA*SGFCWN Trigger: ATTCCAGCAGAAACCAGACAAAGCACTCTGAACATG...GACATTTTTGTGGAGTAGTTTGCAGTGAGATAACAGTGCAATAAAGATACAGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026972.8 |
||
| CDS-3UTR GCA 90 bp | CGCCAGGGATCCTTCGATCTGGTCGGGCCTCCCACACAGGGCATGCTCGGTGGAACCAGCTGCCTCTGCTaGCGGCTGAGCGCAGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RQGSFDLVGPPTQGMLGGTSCLC*RLSAGA Trigger: TGCTCCTGCGCTCAGCCGGCAGCAGAGGCAGCTGGT...TCCACCGAGCATGCCCTGTGTGGGAGGCCCGACCAGATCGAAGGATCCCTGGCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160645.8 |
||
| CDS-3UTR TCA 90 bp | ATGGGAAGGACGGAGCGCTGGCCACTCTGCTGCATGTTCAGAGTGCTTTGTCTGGCCTCTGCTGCCGGCTaGGCGCAGGAGCAACCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: MGRTERWPLCCMFRVLCLASAAG*AQEQPG Trigger: GCCCGGTTGCTCCTGCGCTCAGCCGGCAGCAGAGGC...CAGACAAAGCACTCTGAACATGCAGCAGAGTGGCCAGCGCTCCGTCCTTCCCAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026972.8 |
||
| CDS-3UTR GCA 90 bp | TGGCTAGGTCGTCCTCCACCACACTGCTCAGCCCGTCCTTCTCCACACAGTCTCCCAGCCTGGACCAGCTaGCTCTGCTGCCGGCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: WLGRPPPHCSARPSPHSLPAWTS*LCCRLS Trigger: GCTCAGCCGGCAGCAGAGGCAGCTGGTCCAGGCTGG...GAGACTGTGTGGAGAAGGACGGGCTGAGCAGTGTGGTGGAGGACGACCTAGCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160645.8 |
||
| CDS-3UTR GCA 90 bp | GTAGGGTGGCGTCTGCTTCACCTCCTCACAGTAATCAGGGTCGACTTCCCACTCCGAAGCAGCGGCCGATaGGCTGGGTCACGGGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: VGWRLLHLLTVIRVDFPLRSSGR*AGSRGG Trigger: GCCACCCCGTGACCCAGCGCATCGGCCGCTGCTTCG...GAGTGGGAAGTCGACCCTGATTACTGTGAGGAGGTGAAGCAGACGCCACCCTAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160645.8 |
||
| CDS-3UTR CCA 90 bp | CCAGGGATCCTTCGATCTGGTCGGGCCTCCCACACAGGGCATGCTCGGTGGAACGCAGTGTGTGTTTGTTaGGCCAGCCTGCGTCGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PGILRSGRASHTGHARWNAVCVC*ASLRRH Trigger: GTGGCGACGCAGGCTGGCCCAACAAACACACACTGC...GTTCCACCGAGCATGCCCTGTGTGGGAGGCCCGACCAGATCGAAGGATCCCTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160645.8 |
||
| CDS-3UTR GCA 90 bp | CGGAGCGCTGGCCACTCTGCTGCATGTTCAGAGTGCTTTGTCTGGTTTCTGCTGCCAGCCTGGACCAGCTaGCTCTGCTGCCGGCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RSAGHSAACSECFVWFLLPAWTS*LCCRLS Trigger: GCTCAGCCGGCAGCAGAGGCAGCTGGTCCAGGCTGG...CAGCAGAAACCAGACAAAGCACTCTGAACATGCAGCAGAGTGGCCAGCGCTCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026972.8 |
||
| 3UTR CAA 72 bp | CTGCTGGCCTGGGGCCAATGGGCTCTGTGTAGTGTCTaGACACCCATCGTCCAAAGCTCAGCCAAGGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LLAWGQWALCSV*TPIVQSSAKAG Trigger: GCCTGCCTTGGCTGAGCTTTGGACGATGGGTGTCAAGACACTACACAGAGCCCATTGGCCCCAGGCCAGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026972.8 |
||
| CDS-3UTR TCA 90 bp | CTTCTCCACACAGTCTCGCACAGCCTGCAGCACTATGCGCAACCGCCGGTCCAGAGGCTGGATCTGAGCTaGAGTCTTGCAGGATGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: LLHTVSHSLQHYAQPPVQRLDLS*SLAGCA Trigger: TGCGCATCCTGCAAGACTTCAGCTCAGATCCAGCCT...CTGGACCGGCGGTTGCGCATAGTGCTGCAGGCTGTGCGAGACTGTGTGGAGAAG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160645.8 |
||
| CDS-3UTR GCA 90 bp | GCTCAGTGGCTAGGTCGTCCTCCACCACACTGCTCAGCCCGTCCTTCTCCACACATCCACCGGCTCTGCTaGAGAAGGCAGCTTCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: AQWLGRPPPHCSARPSPHIHRLC*RRQLLQ Trigger: TTGGAGAAGCTGCCTTCTGCAGCAGAGCCGGTGGAT...GTGTGGAGAAGGACGGGCTGAGCAGTGTGGTGGAGGACGACCTAGCCACTGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160645.8 |
||
| CDS-3UTR TCA 90 bp | ATGGGAAGGACGGAGCGCTGGCCACTCTGCTGCATGTTCAGAGTGCTTTGTCTGACGCTGGTGATCTTCTaGGAGCCGAGGTCCCGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: MGRTERWPLCCMFRVLCLTLVIF*EPRSRS Trigger: ACTGCGGGACCTCGGCTCTCAGAAGATCACCAGCGT...CAGACAAAGCACTCTGAACATGCAGCAGAGTGGCCAGCGCTCCGTCCTTCCCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026972.8 |
||
| CDS-3UTR TCA 90 bp | ACAGTAGTAGGAACACTCCCCGTAGAAACAGATGTTGTTGGCTGGAGACACAAAGCCTCTGCTGCCGGCTaGGCGCAGGAGCAACCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: TVVGTLPVETDVVGWRHKASAAG*AQEQPG Trigger: GCCCGGTTGCTCCTGCGCTCAGCCGGCAGCAGAGGC...TTTGTGTCTCCAGCCAACAACATCTGTTTCTACGGGGAGTGTTCCTACTACTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160645.8 |
||
| CDS-3UTR GCA 90 bp | TGCAGCAGCGGACAAGTGCATAGCTGGTCATTGGTATCCAAAAACCCATTCTTGCGAAGCAGCGGCCGATaGGCTGGGTCACGGGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: CSSGQVHSWSLVSKNPFLRSSGR*AGSRGG Trigger: GCCACCCCGTGACCCAGCGCATCGGCCGCTGCTTCG...CAAGAATGGGTTTTTGGATACCAATGACCAGCTATGCACTTGTCCGCTGCTGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026972.8 |
||
| 3UTR CAA 72 bp | GAGCCGAGGTCCCGCAGTAAGGCATCGATGGCTGGGTaGTGTCTGGAGTACAGCTCATACCGGTTGATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: EPRSRSKASMAG*CLEYSSYRLMP Trigger: TGGCATCAACCGGTATGAGCTGTACTCCAGACACAACCCAGCCATCGATGCCTTACTGCGGGACCTCGGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160645.8 |
||
| CDS-3UTR TCA 90 bp | CAAACTACTCCACAAAAATGTCCCAAGGCTGGCCTGCTGGCCTGGGGCCAATGGAGGCTGGATCTGAGCTaGAGTCTTGCAGGATGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: QTTPQKCPKAGLLAWGQWRLDLS*SLAGCA Trigger: TGCGCATCCTGCAAGACTTCAGCTCAGATCCAGCCT...CCATTGGCCCCAGGCCAGCAGGCCAGCCTTGGGACATTTTTGTGGAGTAGTTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026972.8 |
||
| CDS-3UTR CCA 90 bp | CAAACTACTCCACAAAAATGTCCCAAGGCTGGCCTGCTGGCCTGGGGCCAATGGCAGCTGCCTCACCAGTaGGCAAGAATTCTGCGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: QTTPQKCPKAGLLAWGQWQLPHQ*ARILRL Trigger: AAGGCGCAGAATTCTTGCCCACTGGTGAGGCAGCTG...CCATTGGCCCCAGGCCAGCAGGCCAGCCTTGGGACATTTTTGTGGAGTAGTTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026972.8 |
||
| 3UTR CAA 72 bp | TTATCCCGCGTCACATCCCGGATCTCCTTGGTCATGTaGATCATCCTACCAGCCACTGGAGGGACTCTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: LSRVTSRISLVM*IILPATGGTLR Trigger: CCGCAGAGTCCCTCCAGTGGCTGGTAGGATGATCAACATGACCAAGGAGATCCGGGATGTGACGCGGGATAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160645.8 |
||
| CDS-3UTR TCA 90 bp | TCCTTGAAGTGGCTCAGAGGTTATCTCTGGTCTGCTGGATGGTTCTCCATTAACCAGCTGCGTGCCCCCTaGCTTCATGGCGACGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SLKWLRGYLWSAGWFSINQLRAP*LHGDAG Trigger: ACCAGCGTCGCCATGAAGTCAGGGGGCACGCAGCTG...GTTAATGGAGAACCATCCAGCAGACCAGAGATAACCTCTGAGCCACTTCAAGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026972.8 |
||
| CDS-3UTR TCA 90 bp | CAAACTACTCCACAAAAATGTCCCAAGGCTGGCCTGCTGGCCTGGGGCCAATGGTCTGCTTCATGGGTTTaGATAGCGCCTGCCCGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: QTTPQKCPKAGLLAWGQWSASWV*IAPARN Trigger: ATTACGGGCAGGCGCTATTCAAACCCATGAAGCAGA...CCATTGGCCCCAGGCCAGCAGGCCAGCCTTGGGACATTTTTGTGGAGTAGTTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026972.8 |
||
| CDS-3UTR GCA 90 bp | GAGCCATGGCACACGCTTGCTGTATCTTTATTGCACTGTTATCTCACTGCAAACACCAGCTGCCTCTGCTaGCGGCTGAGCGCAGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: EPWHTLAVSLLHCYLTANTSCLC*RLSAGA Trigger: TGCTCCTGCGCTCAGCCGGCAGCAGAGGCAGCTGGT...GTTTGCAGTGAGATAACAGTGCAATAAAGATACAGCAAGCGTGTGCCATGGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026972.8 |
||
| CDS-3UTR GCA 90 bp | TCGCTGTCTCCCCTTCCTAGAGCTCTACAGTCTTTGAGAGAGGAGGCCCCAGGATCTGAGCTGAAGTCTTaGAGGATGCGCAGTGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SLSPLPRALQSLREEAPGSELKS*RMRSVC Trigger: ACACACACTGCGCATCCTGCAAGACTTCAGCTCAGA...TCCTGGGGCCTCCTCTCTCAAAGACTGTAGAGCTCTAGGAAGGGGAGACAGCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026972.8 |
||
| CDS-3UTR CCA 90 bp | TGCATAGCTGGTCATTGGTATCCAAAAACCCATTCTTGGGTGCCCATCTGCTCCGCAGTGTGTGTTTGTTaGGCCAGCCTGCGTCGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: CIAGHWYPKTHSWVPICSAVCVC*ASLRRH Trigger: GTGGCGACGCAGGCTGGCCCAACAAACACACACTGC...GGAGCAGATGGGCACCCAAGAATGGGTTTTTGGATACCAATGACCAGCTATGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026972.8 |
||
| CDS-3UTR CCA 90 bp | AGCTGGTCATTGGTATCCAAAAACCCATTCTTGGGTGCCCATCTGCTCCGACACAGGATCCTGTCCAGGTaGAAGGCAGCGATCTCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: SWSLVSKNPFLGAHLLRHRILSR*KAAISA Trigger: TGCGGAGATCGCTGCCTTCCACCTGGACAGGATCCT...GTGTCGGAGCAGATGGGCACCCAAGAATGGGTTTTTGGATACCAATGACCAGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026972.8 |
||
| CDS-3UTR CCA 90 bp | TGCATAGCTGGTCATTGGTATCCAAAAACCCATTCTTGGGTGCCCATCTGCTCCAGGGATCCTTCGATCTaGTCGGGCCTCCCACACAGG | + |
|
Preference number: 4 (lower is better) Translates to: CIAGHWYPKTHSWVPICSRDPSI*SGLPHR Trigger: CCTGTGTGGGAGGCCCGACCAGATCGAAGGATCCCT...GGAGCAGATGGGCACCCAAGAATGGGTTTTTGGATACCAATGACCAGCTATGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026972.8 |
||
| 3UTR CAA 72 bp | GGAGCGCTGGCCACTCTGCTGCATGTTCAGAGTGCTTaGTCTGGTTTCTGCTGGAATTGGAGGCCCATACAT | + |
|
Preference number: 4 (lower is better) Translates to: GALATLLHVQSA*SGFCWNWRPIH Trigger: ATGTATGGGCCTCCAATTCCAGCAGAAACCAGACAAAGCACTCTGAACATGCAGCAGAGTGGCCAGCGCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026972.8 |
||
| 3UTR CAA 72 bp | CATAGCTTCTTATCCCGCGTCACATCCCGGATCTCCTaGGTCATGTTGATCATCCTACCAGCCACTGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: HSFLSRVTSRIS*VMLIILPATGG Trigger: CCCTCCAGTGGCTGGTAGGATGATCAACATGACCAAGGAGATCCGGGATGTGACGCGGGATAAGAAGCTATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160645.8 |
||
| CDS-3UTR GCA 90 bp | GCTGGAATTGGAGGCCCATACATCCCTATCAGAACCATGAGGGAGACCCCATGCGTCGACTTCCCACTCTaGCTTCTTTCGCTTGTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: AGIGGPYIPIRTMRETPCVDFPL*LLSLVV Trigger: TACCACAAGCGAAAGAAGGCAGAGTGGGAAGTCGAC...GCATGGGGTCTCCCTCATGGTTCTGATAGGGATGTATGGGCCTCCAATTCCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026972.8 |
||
| 3UTR CAA 72 bp | CTGCTCTGCAGCAGCGGACAAGTGCATAGCTGGTCATaGGTATCCAAAAACCCATTCTTGGGTGCCCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLCSSGQVHSWS*VSKNPFLGAHL Trigger: CAGATGGGCACCCAAGAATGGGTTTTTGGATACCAATGACCAGCTATGCACTTGTCCGCTGCTGCAGAGCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026972.8 |
||
| 3UTR CAA 72 bp | AGCTCATCGTGTGAGTATTTCCCAAACCCGCGCCCGTaGTCCAAGTGGATGATGAAGGTCTCATTCCCGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SSSCEYFPNPRP*SKWMMKVSFPN Trigger: GTTCGGGAATGAGACCTTCATCATCCACTTGGACAACGGGCGCGGGTTTGGGAAATACTCACACGATGAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160645.8 |
||
| CDS-3UTR TCA 90 bp | AGGACGGAGCGCTGGCCACTCTGCTGCATGTTCAGAGTGCTTTGTCTGGTTTCTGATCCATGTTCCCCATaGGGAAATCAAAGACGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: RTERWPLCCMFRVLCLVSDPCSP*GNQRRS Trigger: TGACCGTCTTTGATTTCCTCATGGGGAACATGGATC...AGAAACCAGACAAAGCACTCTGAACATGCAGCAGAGTGGCCAGCGCTCCGTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026972.8 |
||
| CDS-3UTR CCA 90 bp | TCCTTGAAGTGGCTCAGAGGTTATCTCTGGTCTGCTGGATGGTTCTCCATTAACAGGCTCTGTGCTCAGTaGCTAGGTCGTCCTCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: SLKWLRGYLWSAGWFSINRLCAQ*LGRPPP Trigger: TGGTGGAGGACGACCTAGCCACTGAGCACAGAGCCT...GTTAATGGAGAACCATCCAGCAGACCAGAGATAACCTCTGAGCCACTTCAAGGA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026972.8 |
||
| CDS-3UTR GCA 90 bp | TTGAAGTGGCTCAGAGGTTATCTCTGGTCTGCTGGATGGTTCTCCATTAACAGGATCCACCGGCTCTGCTaGAGAAGGCAGCTTCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LKWLRGYLWSAGWFSINRIHRLC*RRQLLQ Trigger: TTGGAGAAGCTGCCTTCTGCAGCAGAGCCGGTGGAT...CCTGTTAATGGAGAACCATCCAGCAGACCAGAGATAACCTCTGAGCCACTTCAA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026972.8 |
||
| CDS-3UTR GCA 90 bp | CAGAGTGCTTTGTCTGGTTTCTGCTGGAATTGGAGGCCCATACATCCCTATCAGATGATGAGCTTCAGCTaGGTGCCCCCTGACTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: QSALSGFCWNWRPIHPYQMMSFS*VPPDFM Trigger: CATGAAGTCAGGGGGCACGCAGCTGAAGCTCATCAT...CTGATAGGGATGTATGGGCCTCCAATTCCAGCAGAAACCAGACAAAGCACTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026972.8 |
||
| CDS-3UTR GCA 90 bp | TATCTCTGGTCTGCTGGATGGTTCTCCATTAACAGGAGTGTGAGCCTTTTGTTAGGTGCCACCTTGTCATaGTGCAGGGACTCGGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: YLWSAGWFSINRSVSLLLGATLS*CRDSAI Trigger: GATGGCCGAGTCCCTGCAGCATGACAAGGTGGCACC...TAACAAAAGGCTCACACTCCTGTTAATGGAGAACCATCCAGCAGACCAGAGATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026972.8 |
||
| CDS-3UTR TCA 90 bp | TGCATAGCTGGTCATTGGTATCCAAAAACCCATTCTTGGGTGCCCATCTGCTCCTCTCCTTGGTCATGTTaGTCATCCTACCAGCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: CIAGHWYPKTHSWVPICSSPWSC*SSYQPL Trigger: CAGTGGCTGGTAGGATGATCAACATGACCAAGGAGA...GGAGCAGATGGGCACCCAAGAATGGGTTTTTGGATACCAATGACCAGCTATGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026972.8 |
||
| CDS-3UTR CCA 90 bp | TTCAGAGTGCTTTGTCTGGTTTCTGCTGGAATTGGAGGCCCATACATCCCTATCGCAGTAAGGCATCGATaGCTGGGTTGTGTCTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: FRVLCLVSAGIGGPYIPIAVRHR*LGCVWS Trigger: ACTCCAGACACAACCCAGCCATCGATGCCTTACTGC...GATAGGGATGTATGGGCCTCCAATTCCAGCAGAAACCAGACAAAGCACTCTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026972.8 |
||
| CDS-3UTR CCA 90 bp | GCCATGGCACACGCTTGCTGTATCTTTATTGCACTGTTATCTCACTGCAAACTAGCCATGTCTTCCTCTTaGCCAGCGACAGGTCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: AMAHACCIFIALLSHCKLAMSSS*PATGQA Trigger: TGCCTGACCTGTCGCTGGCCAAGAGGAAGACATGGC...TAGTTTGCAGTGAGATAACAGTGCAATAAAGATACAGCAAGCGTGTGCCATGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026972.8 |
||
| CDS-3UTR TCA 90 bp | CAGAGTGCTTTGTCTGGTTTCTGCTGGAATTGGAGGCCCATACATCCCTATCAGTGCCAATGTGGAATTTaGGCCAGTTGGGATAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: QSALSGFCWNWRPIHPYQCQCGI*ASWDRG Trigger: ACCTCTATCCCAACTGGCTCAAATTCCACATTGGCA...CTGATAGGGATGTATGGGCCTCCAATTCCAGCAGAAACCAGACAAAGCACTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026972.8 |
||
| CDS-3UTR CCA 90 bp | TTCAGAGTGCTTTGTCTGGTTTCTGCTGGAATTGGAGGCCCATACATCCCTATCCGGTTGATGCCAATGTaGAATTTGAGCCAGTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: FRVLCLVSAGIGGPYIPIRLMPM*NLSQLG Trigger: TCCCAACTGGCTCAAATTCCACATTGGCATCAACCG...GATAGGGATGTATGGGCCTCCAATTCCAGCAGAAACCAGACAAAGCACTCTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026972.8 |
||
| CDS-3UTR CCA 90 bp | GAGCCATGGCACACGCTTGCTGTATCTTTATTGCACTGTTATCTCACTGCAAACACAGGGCATGCTCGGTaGAACAGTAGTAGGAACACT | + |
|
Preference number: 4 (lower is better) Translates to: EPWHTLAVSLLHCYLTANTGHAR*NSSRNT Trigger: AGTGTTCCTACTACTGTTCCACCGAGCATGCCCTGT...GTTTGCAGTGAGATAACAGTGCAATAAAGATACAGCAAGCGTGTGCCATGGCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026972.8 |
||
| CDS-3UTR CCA 90 bp | TATCTCTGGTCTGCTGGATGGTTCTCCATTAACAGGAGTGTGAGCCTTTTGTTAGTTTGTGTTCCTCTTTaGCCAGCAGCTGCAGTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: YLWSAGWFSINRSVSLLLVCVPL*PAAAVS Trigger: TGAGACTGCAGCTGCTGGCCAAAGAGGAACACAAAC...TAACAAAAGGCTCACACTCCTGTTAATGGAGAACCATCCAGCAGACCAGAGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026972.8 |
||
| CDS-3UTR CCA 90 bp | TTGCTGTATCTTTATTGCACTGTTATCTCACTGCAAACTACTCCACAAAAATGTGCCACTGTCGTAGGGTaGCGTCTGCTTCACCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LLYLYCTVISLQTTPQKCATVVG*RLLHLL Trigger: GAGGAGGTGAAGCAGACGCCACCCTACGACAGTGGC...ACATTTTTGTGGAGTAGTTTGCAGTGAGATAACAGTGCAATAAAGATACAGCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026972.8 |
||
| CDS-3UTR CCA 90 bp | TTGCTGTATCTTTATTGCACTGTTATCTCACTGCAAACTACTCCACAAAAATGTTGGCTGGGTTGTGTCTaGAGTACAGCTCATACCGGT | + |
|
Preference number: 4 (lower is better) Translates to: LLYLYCTVISLQTTPQKCWLGCV*STAHTG Trigger: ACCGGTATGAGCTGTACTCCAGACACAACCCAGCCA...ACATTTTTGTGGAGTAGTTTGCAGTGAGATAACAGTGCAATAAAGATACAGCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026972.8 |
||
| CDS CCA 90 bp | CTGCCGGCTGAGCGCAGGAGCAACCGGGCTCCCCGGAGGATCGCGTaGCGCGTCGGTCCAGCTTGGGTAGCAGGTCAACAGCAATGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: LPAERRSNRAPRRIA*RVGPAWVAGQQQCA Trigger: TGCACATTGCTGTTGACCTGCTACCCAAGCTGGACCGACGCGCCACGCGATCCTCCGGGGAGCCCGGTTGCTCCTGCGCTCAGCCGGCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026972.8 ENSMUST00000160645.8 |
||
| CDS-3UTR CAA 90 bp | GCAGCTGGTAGAGCACGGGTGCCACCTTGTCATGCTGCAGGGACTCGGCCATCACCCCCGGTCTGCTCCTaGCCTGGGCCCAGCCTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: AAGRARVPPCHAAGTRPSPPVCS*PGPSLD Trigger: GTCCAGGCTGGGCCCAGGCAAGGAGCAGACCGGGGG...TGATGGCCGAGTCCCTGCAGCATGACAAGGTGGCACCCGTGCTCTACCAGCTGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160645.8 |
||
| CDS GCA 90 bp | GCTGAAGTCTTGCAGGATGCGCAGTGTGTGTTTGTTGGGCCAGCCTaGGTCGCCACCGGCGGACTCCCCCGGTCTGCTCCTTGCCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: AEVLQDAQCVFVGPA*VATGGLPRSAPCLG Trigger: GCCCAGGCAAGGAGCAGACCGGGGGAGTCCGCCGGTGGCGACGCAGGCTGGCCCAACAAACACACACTGCGCATCCTGCAAGACTTCAGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026972.8 ENSMUST00000160645.8 |
||
| CDS-3UTR CAA 90 bp | CGGAGCGCTGGCCACTCTGCTGCATGTTCAGAGTGCTTTGTCTGGTTTCTGCTGCCCCCGGTCTGCTCCTaGCCTGGGCCCAGCCTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: RSAGHSAACSECFVWFLLPPVCS*PGPSLD Trigger: GTCCAGGCTGGGCCCAGGCAAGGAGCAGACCGGGGG...CAGCAGAAACCAGACAAAGCACTCTGAACATGCAGCAGAGTGGCCAGCGCTCCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026972.8 |
||
| CDS CCA 90 bp | AGCAACCGGGCTCCCCGGAGGATCGCGTGGCGCGTCGGTCCAGCTTaGGTAGCAGGTCAACAGCAATGTGCAAAGCGCAAGCCAGTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SNRAPRRIAWRVGPA*VAGQQQCAKRKPVG Trigger: TCCTACTGGCTTGCGCTTTGCACATTGCTGTTGACCTGCTACCCAAGCTGGACCGACGCGCCACGCGATCCTCCGGGGAGCCCGGTTGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026972.8 ENSMUST00000160645.8 |
||
| CDS-3UTR CAA 90 bp | GAGCCGAGGTCCCGCAGTAAGGCATCGATGGCTGGGTTGTGTCTGGAGTACAGCGCGCGTCGGTCCAGCTaGGGTAGCAGGTCAACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: EPRSRSKASMAGLCLEYSARRSS*GSRSTA Trigger: TGCTGTTGACCTGCTACCCAAGCTGGACCGACGCGC...GCTGTACTCCAGACACAACCCAGCCATCGATGCCTTACTGCGGGACCTCGGCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160645.8 |
||
| CDS-3UTR CAA 90 bp | CAAACTACTCCACAAAAATGTCCCAAGGCTGGCCTGCTGGCCTGGGGCCAATGGGCGCGTCGGTCCAGCTaGGGTAGCAGGTCAACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: QTTPQKCPKAGLLAWGQWARRSS*GSRSTA Trigger: TGCTGTTGACCTGCTACCCAAGCTGGACCGACGCGC...CCATTGGCCCCAGGCCAGCAGGCCAGCCTTGGGACATTTTTGTGGAGTAGTTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026972.8 |
||
| CDS GCA 90 bp | CGCGTGGCGCGTCGGTCCAGCTTGGGTAGCAGGTCAACAGCAATGTaGAAAGCGCAAGCCAGTAGGAATACTACCAGGATGAGCACGCGA | + |
|
Preference number: 5 (lower is better) Translates to: RVARRSSLGSRSTAM*KAQASRNTTRMSTR Trigger: TCGCGTGCTCATCCTGGTAGTATTCCTACTGGCTTGCGCTTTGCACATTGCTGTTGACCTGCTACCCAAGCTGGACCGACGCGCCACGCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026972.8 ENSMUST00000160645.8 |
||
| CDS-3UTR CAA 90 bp | TTGATCATCCTACCAGCCACTGGAGGGACTCTGCGGAAATCCAGGATCCTGTCCATGCGCAGTGTGTGTTaGTTGGGCCAGCCTGCGTCG | + |
|
Preference number: 5 (lower is better) Translates to: LIILPATGGTLRKSRILSMRSVC*LGQPAS Trigger: CGACGCAGGCTGGCCCAACAAACACACACTGCGCAT...GGACAGGATCCTGGATTTCCGCAGAGTCCCTCCAGTGGCTGGTAGGATGATCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160645.8 |
||
| CDS GCA 90 bp | AAGGAGTGGGAGGTTAGGTTAGAGGCTGGATCTGAGCTGAAGTCTTaGAGGATGCGCAGTGTGTGTTTGTTGGGCCAGCCTGCGTCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: KEWEVRLEAGSELKS*RMRSVCLLGQPASP Trigger: TGGCGACGCAGGCTGGCCCAACAAACACACACTGCGCATCCTGCAAGACTTCAGCTCAGATCCAGCCTCTAACCTAACCTCCCACTCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026972.8 ENSMUST00000160645.8 |
||
| CDS GCA 90 bp | GCTGCCTCACCAGTGGGCAAGAATTCTGCGCCTTCAGCACCTTCATaGGGCCAGTCAGGATTCTCTGCTGCCTTGGGGTTAAACCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: AASPVGKNSAPSAPS*GQSGFSAALGLNLM Trigger: CATCAGGTTTAACCCCAAGGCAGCAGAGAATCCTGACTGGCCGCATGAAGGTGCTGAAGGCGCAGAATTCTTGCCCACTGGTGAGGCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026972.8 |
||
| CDS GCA 90 bp | GTTGGGATAGAGGTTCACAGCTGCCTCACCAGTGGGCAAGAATTCTaGGCCTTCAGCACCTTCATGCGGCCAGTCAGGATTCTCTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: VGIEVHSCLTSGQEF*AFSTFMRPVRILCC Trigger: GCAGCAGAGAATCCTGACTGGCCGCATGAAGGTGCTGAAGGCGCAGAATTCTTGCCCACTGGTGAGGCAGCTGTGAACCTCTATCCCAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026972.8 |
||
| CDS-3UTR CAA 90 bp | CGGAGCGCTGGCCACTCTGCTGCATGTTCAGAGTGCTTTGTCTGGTTTCTGCTGGCATCGATGGCTGGGTaGTGTCTGGAGTACAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: RSAGHSAACSECFVWFLLASMAG*CLEYSS Trigger: TGAGCTGTACTCCAGACACAACCCAGCCATCGATGC...CAGCAGAAACCAGACAAAGCACTCTGAACATGCAGCAGAGTGGCCAGCGCTCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026972.8 |
||
| CDS-3UTR CAA 90 bp | CATGAGGGAGACCCCATGCTCCCTGCCGCAGGTCACCCTATGGGGATGACCGATACATCCCGGATCTCCTaGGTCATGTTGATCATCCTA | + |
|
Preference number: 5 (lower is better) Translates to: HEGDPMLPAAGHPMGMTDTSRIS*VMLIIL Trigger: TAGGATGATCAACATGACCAAGGAGATCCGGGATGT...ATCGGTCATCCCCATAGGGTGACCTGCGGCAGGGAGCATGGGGTCTCCCTCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026972.8 |
||
| CDS-3UTR CAA 90 bp | TTCAGAGTGCTTTGTCTGGTTTCTGCTGGAATTGGAGGCCCATACATCCCTATCCGCAGTGTGTGTTTGTaGGGCCAGCCTGCGTCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: FRVLCLVSAGIGGPYIPIRSVCL*GQPASP Trigger: TGGCGACGCAGGCTGGCCCAACAAACACACACTGCG...GATAGGGATGTATGGGCCTCCAATTCCAGCAGAAACCAGACAAAGCACTCTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026972.8 |
||
| CDS-3UTR CAA 90 bp | TCCTTGAAGTGGCTCAGAGGTTATCTCTGGTCTGCTGGATGGTTCTCCATTAACATGCGCAGTGTGTGTTaGTTGGGCCAGCCTGCGTCG | + |
|
Preference number: 5 (lower is better) Translates to: SLKWLRGYLWSAGWFSINMRSVC*LGQPAS Trigger: CGACGCAGGCTGGCCCAACAAACACACACTGCGCAT...GTTAATGGAGAACCATCCAGCAGACCAGAGATAACCTCTGAGCCACTTCAAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026972.8 |
||
| CDS-3UTR CAA 90 bp | ATGGGAAGGACGGAGCGCTGGCCACTCTGCTGCATGTTCAGAGTGCTTTGTCTGTACAGCTCATACCGGTaGATGCCAATGTGGAATTTG | + |
|
Preference number: 5 (lower is better) Translates to: MGRTERWPLCCMFRVLCLYSSYR*MPMWNL Trigger: CAAATTCCACATTGGCATCAACCGGTATGAGCTGTA...CAGACAAAGCACTCTGAACATGCAGCAGAGTGGCCAGCGCTCCGTCCTTCCCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026972.8 |
||
| CDS-3UTR CAA 90 bp | GCCATGGCACACGCTTGCTGTATCTTTATTGCACTGTTATCTCACTGCAAACTAAGCACGGGTGCCACCTaGTCATGCTGCAGGGACTCG | + |
|
Preference number: 5 (lower is better) Translates to: AMAHACCIFIALLSHCKLSTGAT*SCCRDS Trigger: CGAGTCCCTGCAGCATGACAAGGTGGCACCCGTGCT...TAGTTTGCAGTGAGATAACAGTGCAATAAAGATACAGCAAGCGTGTGCCATGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026972.8 |
||
| CDS-3UTR CAA 90 bp | TCCTTGAAGTGGCTCAGAGGTTATCTCTGGTCTGCTGGATGGTTCTCCATTAACAGTTTGTGTTCCTCTTaGGCCAGCAGCTGCAGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: SLKWLRGYLWSAGWFSINSLCSS*ASSCSL Trigger: GAGACTGCAGCTGCTGGCCAAAGAGGAACACAAACT...GTTAATGGAGAACCATCCAGCAGACCAGAGATAACCTCTGAGCCACTTCAAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026972.8 |
||
| CDS-3UTR CAA 90 bp | CAGAGTGCTTTGTCTGGTTTCTGCTGGAATTGGAGGCCCATACATCCCTATCAGATCTCCTTGGTCATGTaGATCATCCTACCAGCCACT | + |
|
Preference number: 5 (lower is better) Translates to: QSALSGFCWNWRPIHPYQISLVM*IILPAT Trigger: AGTGGCTGGTAGGATGATCAACATGACCAAGGAGAT...CTGATAGGGATGTATGGGCCTCCAATTCCAGCAGAAACCAGACAAAGCACTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026972.8 |
||
| CDS GCA 72 bp | GCTCCTTGCCTGGGCCCAGCCTGGACCAGCTGCCTCTaGTGCCGGCTGAGCGCAGGAGCAACCGGGCTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: APCLGPAWTSCL*CRLSAGATGLP Trigger: GGGGAGCCCGGTTGCTCCTGCGCTCAGCCGGCAGCAGAGGCAGCTGGTCCAGGCTGGGCCCAGGCAAGGAGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026972.8 ENSMUST00000160645.8 |
||
| CDS CCA 72 bp | GAGCGCAGGAGCAACCGGGCTCCCCGGAGGATCGCGTaGCGCGTCGGTCCAGCTTGGGTAGCAGGTCAACAG | + |
|
Preference number: 6 (lower is better) Translates to: ERRSNRAPRRIA*RVGPAWVAGQQ Trigger: CTGTTGACCTGCTACCCAAGCTGGACCGACGCGCCACGCGATCCTCCGGGGAGCCCGGTTGCTCCTGCGCTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026972.8 ENSMUST00000160645.8 |
||
| CDS GCA 72 bp | TTGCAGGATGCGCAGTGTGTGTTTGTTGGGCCAGCCTaGGTCGCCACCGGCGGACTCCCCCGGTCTGCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: LQDAQCVFVGPA*VATGGLPRSAP Trigger: AGGAGCAGACCGGGGGAGTCCGCCGGTGGCGACGCAGGCTGGCCCAACAAACACACACTGCGCATCCTGCAA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026972.8 ENSMUST00000160645.8 |
||
| CDS CAA 72 bp | GAGCTGAAGTCTTGCAGGATGCGCAGTGTGTGTTTGTaGGGCCAGCCTGCGTCGCCACCGGCGGACTCCCCC | + |
|
Preference number: 6 (lower is better) Translates to: ELKSCRMRSVCL*GQPASPPADSP Trigger: GGGGGAGTCCGCCGGTGGCGACGCAGGCTGGCCCAACAAACACACACTGCGCATCCTGCAAGACTTCAGCTC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026972.8 ENSMUST00000160645.8 |
||
| CDS CAA 90 bp | GAGCAACCGGGCTCCCCGGAGGATCGCGTGGCGCGTCGGTCCAGCTaGGGTAGCAGGTCAACAGCAATGTGCAAAGCGCAAGCCAGTAGG | + |
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Preference number: 6 (lower is better) Translates to: EQPGSPEDRVARRSS*GSRSTAMCKAQASR Trigger: CCTACTGGCTTGCGCTTTGCACATTGCTGTTGACCTGCTACCCAAGCTGGACCGACGCGCCACGCGATCCTCCGGGGAGCCCGGTTGCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026972.8 ENSMUST00000160645.8 |
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| CDS CAA 90 bp | GCTGGATCTGAGCTGAAGTCTTGCAGGATGCGCAGTGTGTGTTTGTaGGGCCAGCCTGCGTCGCCACCGGCGGACTCCCCCGGTCTGCTC | + |
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Preference number: 6 (lower is better) Translates to: AGSELKSCRMRSVCL*GQPASPPADSPGLL Trigger: GAGCAGACCGGGGGAGTCCGCCGGTGGCGACGCAGGCTGGCCCAACAAACACACACTGCGCATCCTGCAAGACTTCAGCTCAGATCCAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026972.8 ENSMUST00000160645.8 |
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| CDS CAA 90 bp | GAGGCTGGATCTGAGCTGAAGTCTTGCAGGATGCGCAGTGTGTGTTaGTTGGGCCAGCCTGCGTCGCCACCGGCGGACTCCCCCGGTCTG | + |
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Preference number: 6 (lower is better) Translates to: EAGSELKSCRMRSVC*LGQPASPPADSPGL Trigger: CAGACCGGGGGAGTCCGCCGGTGGCGACGCAGGCTGGCCCAACAAACACACACTGCGCATCCTGCAAGACTTCAGCTCAGATCCAGCCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026972.8 ENSMUST00000160645.8 |
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| CDS CAA 72 bp | TCTGAGCTGAAGTCTTGCAGGATGCGCAGTGTGTGTTaGTTGGGCCAGCCTGCGTCGCCACCGGCGGACTCC | + |
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Preference number: 6 (lower is better) Translates to: SELKSCRMRSVC*LGQPASPPADS Trigger: GGAGTCCGCCGGTGGCGACGCAGGCTGGCCCAACAAACACACACTGCGCATCCTGCAAGACTTCAGCTCAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026972.8 ENSMUST00000160645.8 |
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| CDS CAA 90 bp | GCGCCTTCAGCACCTTCATGCGGCCAGTCAGGATTCTCTGCTGCCTaGGGGTTAAACCTGATGTCGCTGTTCACATTAAACAGGACGTCG | + |
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Preference number: 6 (lower is better) Translates to: APSAPSCGQSGFSAA*GLNLMSLFTLNRTS Trigger: CGACGTCCTGTTTAATGTGAACAGCGACATCAGGTTTAACCCCAAGGCAGCAGAGAATCCTGACTGGCCGCATGAAGGTGCTGAAGGCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026972.8 |
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| CDS GCA 72 bp | CGTCGGTCCAGCTTGGGTAGCAGGTCAACAGCAATGTaGAAAGCGCAAGCCAGTAGGAATACTACCAGGATG | + |
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Preference number: 6 (lower is better) Translates to: RRSSLGSRSTAM*KAQASRNTTRM Trigger: CATCCTGGTAGTATTCCTACTGGCTTGCGCTTTGCACATTGCTGTTGACCTGCTACCCAAGCTGGACCGACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026972.8 ENSMUST00000160645.8 |
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| CDS GCA 72 bp | GAGGTTAGGTTAGAGGCTGGATCTGAGCTGAAGTCTTaGAGGATGCGCAGTGTGTGTTTGTTGGGCCAGCCT | + |
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Preference number: 6 (lower is better) Translates to: EVRLEAGSELKS*RMRSVCLLGQP Trigger: AGGCTGGCCCAACAAACACACACTGCGCATCCTGCAAGACTTCAGCTCAGATCCAGCCTCTAACCTAACCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026972.8 ENSMUST00000160645.8 |
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| CDS CAA 72 bp | GCACCTTCATGCGGCCAGTCAGGATTCTCTGCTGCCTaGGGGTTAAACCTGATGTCGCTGTTCACATTAAAC | + |
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Preference number: 6 (lower is better) Translates to: APSCGQSGFSAA*GLNLMSLFTLN Trigger: GTTTAATGTGAACAGCGACATCAGGTTTAACCCCAAGGCAGCAGAGAATCCTGACTGGCCGCATGAAGGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026972.8 |
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