Pregenerated sensors for FAM20A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020614Ensembl transcript IDs: ENSMUST00000020938.8, ENSMUST00000155559.8
Found 165 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGATCTTCACACGCAGGGAAGCTGGAGTTAGTGCTGGAGAGTGGCTaGGTTCTGCTGCTTAAGCTCTGCCTGGCCAGGTTCAGAAGTCCC | + |
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Preference number: 1 (lower is better) Translates to: GSSHAGKLELVLESG*VLLLKLCLARFRSP Trigger: GGGACTTCTGAACCTGGCCAGGCAGAGCTTAAGCAGCAGAACTCAGCCACTCTCCAGCACTAACTCCAGCTTCCCTGCGTGTGAAGATCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155559.8 |
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| 3UTR TCA 90 bp | CCAGATCCAGGTTTCACAGTGTGCTCAGAAGATAATCTGCAGTCCTaGTGGAGCCAGAGCTCGTTGGGAAGAGAGAGCCCCAGCCAGTGC | + |
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Preference number: 1 (lower is better) Translates to: PDPGFTVCSEDNLQS*WSQSSLGRESPSQC Trigger: GCACTGGCTGGGGCTCTCTCTTCCCAACGAGCTCTGGCTCCATCAGGACTGCAGATTATCTTCTGAGCACACTGTGAAACCTGGATCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
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| 3UTR CCA 90 bp | AGAAGTCCCTTCCTCTCACCAGCTGCATGTCCTTCTTTTAAAACTTaGCCCAGGATGCAGTTTACTGTTGTGTTGACATTCTGCATATAC | + |
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Preference number: 1 (lower is better) Translates to: RSPFLSPAACPSFKT*PRMQFTVVLTFCIY Trigger: GTATATGCAGAATGTCAACACAACAGTAAACTGCATCCTGGGCCAAGTTTTAAAAGAAGGACATGCAGCTGGTGAGAGGAAGGGACTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155559.8 |
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| 3UTR GCA 90 bp | AAATACATTCCAATTCAGTTTGTCAAAGGGTGGATTTCAAAACCTTaGTTTTATGGGTGTGGGACAGACTCACTAACAAGCTCTGGAAGG | + |
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Preference number: 1 (lower is better) Translates to: KYIPIQFVKGWISKP*FYGCGTDSLTSSGR Trigger: CCTTCCAGAGCTTGTTAGTGAGTCTGTCCCACACCCATAAAAGCAAGGTTTTGAAATCCACCCTTTGACAAACTGAATTGGAATGTATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155559.8 |
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| 3UTR-3UTR TCA 90 bp | CTGCTGCTTAAGCTCTGCCTGGCCAGGTTCAGAAGTCCCTTCCTCTCACCAGCTTTCCTGCCTCCTCCCTaGGCTTGTGCCTTGGCCTCC | + |
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Preference number: 2 (lower is better) Translates to: LLLKLCLARFRSPFLSPAFLPPP*ACALAS Trigger: GGAGGCCAAGGCACAAGCTCAGGGAGGAGGCAGGAA...AGCTGGTGAGAGGAAGGGACTTCTGAACCTGGCCAGGCAGAGCTTAAGCAGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155559.8 |
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| 3UTR-3UTR GCA 90 bp | GCTCAGAAGATAATCTGCAGTCCTGATGGAGCCAGAGCTCGTTGGGAAGAGAGATGCCTTGGCCTCCAGTaGCCCAGGATGGAATGGGGC | + |
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Preference number: 2 (lower is better) Translates to: AQKIICSPDGARARWEERCLGLQ*PRMEWG Trigger: GCCCCATTCCATCCTGGGGCACTGGAGGCCAAGGCA...TCTCTCTTCCCAACGAGCTCTGGCTCCATCAGGACTGCAGATTATCTTCTGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
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| 3UTR-3UTR GCA 90 bp | AAGCTCTGGAAGGGGAAGGTTCTGTCCAAAGCCATGGCGTTGTTTTCACAGGACTGCCTTGGCCTCCAGTaGCCCAGGATGGAATGGGGC | + |
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Preference number: 2 (lower is better) Translates to: KLWKGKVLSKAMALFSQDCLGLQ*PRMEWG Trigger: GCCCCATTCCATCCTGGGGCACTGGAGGCCAAGGCA...GTCCTGTGAAAACAACGCCATGGCTTTGGACAGAACCTTCCCCTTCCAGAGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000155559.8 |
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| 3UTR-3UTR CCA 90 bp | TCCCGTTTGCCTTTTTCAAAGCGTTCCTGCCTCCTCCCTGAGCTTGTGCCTTGGTGCCCCAGGATGGAATaGGGCAACAGGGGCCTACAA | + |
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Preference number: 2 (lower is better) Translates to: SRLPFSKRSCLLPELVPWCPRME*GNRGLQ Trigger: TTGTAGGCCCCTGTTGCCCCATTCCATCCTGGGGCA...CCAAGGCACAAGCTCAGGGAGGAGGCAGGAACGCTTTGAAAAAGGCAAACGGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
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| 3UTR-3UTR GCA 90 bp | TCCAAGCCTGGTCCAGATCCAGGTTTCACAGTGTGCTCAGAAGATAATCTGCAGTCCTCCCTGAGCTTGTaGCTTGGCCTCCAGTGCCCC | + |
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Preference number: 2 (lower is better) Translates to: SKPGPDPGFTVCSEDNLQSSLSL*LGLQCP Trigger: GGGGCACTGGAGGCCAAGGCACAAGCTCAGGGAGGA...CTGCAGATTATCTTCTGAGCACACTGTGAAACCTGGATCTGGACCAGGCTTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
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| 3UTR-3UTR CCA 90 bp | CAGAAGATAATCTGCAGTCCTGATGGAGCCAGAGCTCGTTGGGAAGAGAGAGCCTGCCCCAGGATGGAATaGGGCAACAGGGGCCTACAA | + |
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Preference number: 2 (lower is better) Translates to: QKIICSPDGARARWEERACPRME*GNRGLQ Trigger: TTGTAGGCCCCTGTTGCCCCATTCCATCCTGGGGCA...GGCTCTCTCTTCCCAACGAGCTCTGGCTCCATCAGGACTGCAGATTATCTTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
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| 3UTR-3UTR TCA 90 bp | TCCCGTTTGCCTTTTTCAAAGCGTTCCTGCCTCCTCCCTGAGCTTGTGCCTTGGACCAGCATGAGGTGCTaGCTCCAGTTGTGTGTTCTG | + |
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Preference number: 2 (lower is better) Translates to: SRLPFSKRSCLLPELVPWTSMRC*LQLCVL Trigger: CAGAACACACAACTGGAGTCAGCACCTCATGCTGGT...CCAAGGCACAAGCTCAGGGAGGAGGCAGGAACGCTTTGAAAAAGGCAAACGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
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| 3UTR CAA 90 bp | AGTGACCTCCACCCAAGGATAAAGATGAGGTTCAGTGGATCCCGTTaGCCTTTTTCAAAGCGTTCCTGCCTCCTCCCTGAGCTTGTGCCT | + |
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Preference number: 2 (lower is better) Translates to: SDLHPRIKMRFSGSR*PFSKRSCLLPELVP Trigger: AGGCACAAGCTCAGGGAGGAGGCAGGAACGCTTTGAAAAAGGCAAACGGGATCCACTGAACCTCATCTTTATCCTTGGGTGGAGGTCACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
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| 3UTR-3UTR CCA 90 bp | CTGCTGCTTAAGCTCTGCCTGGCCAGGTTCAGAAGTCCCTTCCTCTCACCAGCTAATAAAAACCGCTCCTaGGAACAGAGCTTCCAAACC | + |
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Preference number: 2 (lower is better) Translates to: LLLKLCLARFRSPFLSPANKNRS*EQSFQT Trigger: GGTTTGGAAGCTCTGTTCCCAGGAGCGGTTTTTATT...AGCTGGTGAGAGGAAGGGACTTCTGAACCTGGCCAGGCAGAGCTTAAGCAGCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155559.8 |
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| 3UTR-3UTR TCA 90 bp | TTCCTCTCACCAGCTGCATGTCCTTCTTTTAAAACTTGGCCCAGGATGCAGTTTACCAGCATGAGGTGCTaGCTCCAGTTGTGTGTTCTG | + |
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Preference number: 2 (lower is better) Translates to: FLSPAACPSFKTWPRMQFTSMRC*LQLCVL Trigger: CAGAACACACAACTGGAGTCAGCACCTCATGCTGGT...AAACTGCATCCTGGGCCAAGTTTTAAAAGAAGGACATGCAGCTGGTGAGAGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155559.8 |
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| 3UTR-3UTR CCA 90 bp | GCTTCCAAACCTTCCAAGCCTGGTCCAGATCCAGGTTTCACAGTGTGCTCAGAAAAAGATGAGGTTCAGTaGATCCCGTTTGCCTTTTTC | + |
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Preference number: 2 (lower is better) Translates to: ASKPSKPGPDPGFTVCSEKDEVQ*IPFAFF Trigger: GAAAAAGGCAAACGGGATCCACTGAACCTCATCTTT...TTCTGAGCACACTGTGAAACCTGGATCTGGACCAGGCTTGGAAGGTTTGGAAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
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| 3UTR CAA 90 bp | AGACTGGATTGGACTCCTGGTTTTACAAGATCCACCTGTAGCTGCTaGAGGATCTTACACATCAAGATTTGTTTCTGTTTCTTCCTGGAG | + |
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Preference number: 2 (lower is better) Translates to: RLDWTPGFTRSTCSC*RILHIKICFCFFLE Trigger: CTCCAGGAAGAAACAGAAACAAATCTTGATGTGTAAGATCCTCAAGCAGCTACAGGTGGATCTTGTAAAACCAGGAGTCCAATCCAGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155559.8 |
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| 3UTR-3UTR CAA 90 bp | CTCTGCCTGGCCAGGTTCAGAAGTCCCTTCCTCTCACCAGCTGCATGTCCTTCTTGGAGCCAGAGCTCGTaGGGAAGAGAGAGCCCCAGC | + |
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Preference number: 3 (lower is better) Translates to: LCLARFRSPFLSPAACPSWSQSS*GRESPS Trigger: GCTGGGGCTCTCTCTTCCCAACGAGCTCTGGCTCCA...AGAAGGACATGCAGCTGGTGAGAGGAAGGGACTTCTGAACCTGGCCAGGCAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155559.8 |
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| 3UTR TCA 72 bp | CCGTTTGCCTTTTTCAAAGCGTTCCTGCCTCCTCCCTaGGCTTGTGCCTTGGCCTCCAGTGCCCCAGGATGG | + |
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Preference number: 3 (lower is better) Translates to: PFAFFKAFLPPP*ACALASSAPGW Trigger: CCATCCTGGGGCACTGGAGGCCAAGGCACAAGCTCAGGGAGGAGGCAGGAACGCTTTGAAAAAGGCAAACGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
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| 3UTR-3UTR CAA 90 bp | GCTCAGAAGATAATCTGCAGTCCTGATGGAGCCAGAGCTCGTTGGGAAGAGAGAGCCTCCTCCCTGAGCTaGTGCCTTGGCCTCCAGTGC | + |
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Preference number: 3 (lower is better) Translates to: AQKIICSPDGARARWEERASSLS*CLGLQC Trigger: GCACTGGAGGCCAAGGCACAAGCTCAGGGAGGAGGC...TCTCTCTTCCCAACGAGCTCTGGCTCCATCAGGACTGCAGATTATCTTCTGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
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| 3UTR TCA 72 bp | CACGCAGGGAAGCTGGAGTTAGTGCTGGAGAGTGGCTaGGTTCTGCTGCTTAAGCTCTGCCTGGCCAGGTTC | + |
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Preference number: 3 (lower is better) Translates to: HAGKLELVLESG*VLLLKLCLARF Trigger: GAACCTGGCCAGGCAGAGCTTAAGCAGCAGAACTCAGCCACTCTCCAGCACTAACTCCAGCTTCCCTGCGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155559.8 |
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| 3UTR-3UTR CAA 90 bp | TCCAAGCCTGGTCCAGATCCAGGTTTCACAGTGTGCTCAGAAGATAATCTGCAGGCCTCCTCCCTGAGCTaGTGCCTTGGCCTCCAGTGC | + |
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Preference number: 3 (lower is better) Translates to: SKPGPDPGFTVCSEDNLQASSLS*CLGLQC Trigger: GCACTGGAGGCCAAGGCACAAGCTCAGGGAGGAGGC...CTGCAGATTATCTTCTGAGCACACTGTGAAACCTGGATCTGGACCAGGCTTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
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| 3UTR-3UTR CAA 90 bp | GCTTCCAAACCTTCCAAGCCTGGTCCAGATCCAGGTTTCACAGTGTGCTCAGAATGGAGCCAGAGCTCGTaGGGAAGAGAGAGCCCCAGC | + |
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Preference number: 3 (lower is better) Translates to: ASKPSKPGPDPGFTVCSEWSQSS*GRESPS Trigger: GCTGGGGCTCTCTCTTCCCAACGAGCTCTGGCTCCA...TTCTGAGCACACTGTGAAACCTGGATCTGGACCAGGCTTGGAAGGTTTGGAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
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| 3UTR CCA 72 bp | TGGAGAGTGGCTGAGTTCTGCTGCTTAAGCTCTGCCTaGCCAGGTTCAGAAGTCCCTTCCTCTCACCAGCTG | + |
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Preference number: 3 (lower is better) Translates to: WRVAEFCCLSSA*PGSEVPSSHQL Trigger: CAGCTGGTGAGAGGAAGGGACTTCTGAACCTGGCCAGGCAGAGCTTAAGCAGCAGAACTCAGCCACTCTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155559.8 |
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| 3UTR TCA 72 bp | TGGGGCAACAGGGGCCTACAAACCAGCATGAGGTGCTaGCTCCAGTTGTGTGTTCTGAGGTCCCACGTTTGT | + |
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Preference number: 3 (lower is better) Translates to: WGNRGLQTSMRC*LQLCVLRSHVC Trigger: ACAAACGTGGGACCTCAGAACACACAACTGGAGTCAGCACCTCATGCTGGTTTGTAGGCCCCTGTTGCCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
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| 3UTR GCA 72 bp | TTCAGTGGATCCCGTTTGCCTTTTTCAAAGCGTTCCTaGCTCCTCCCTGAGCTTGTGCCTTGGCCTCCAGTG | + |
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Preference number: 3 (lower is better) Translates to: FSGSRLPFSKRS*LLPELVPWPPV Trigger: CACTGGAGGCCAAGGCACAAGCTCAGGGAGGAGGCAGGAACGCTTTGAAAAAGGCAAACGGGATCCACTGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
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| 3UTR TCA 72 bp | GGTTTCACAGTGTGCTCAGAAGATAATCTGCAGTCCTaGTGGAGCCAGAGCTCGTTGGGAAGAGAGAGCCCC | + |
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Preference number: 3 (lower is better) Translates to: GFTVCSEDNLQS*WSQSSLGRESP Trigger: GGGGCTCTCTCTTCCCAACGAGCTCTGGCTCCATCAGGACTGCAGATTATCTTCTGAGCACACTGTGAAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
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| 3UTR GCA 72 bp | CCATGGCGTTGTTTTCACAGGACAGACCTGTCTGTGTaGCTTAGGGCTTCACAGACTGGATTGGACTCCTGG | + |
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Preference number: 3 (lower is better) Translates to: PWRCFHRTDLSV*LRASQTGLDSW Trigger: CCAGGAGTCCAATCCAGTCTGTGAAGCCCTAAGGCACACAGACAGGTCTGTCCTGTGAAAACAACGCCATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155559.8 |
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| 3UTR CCA 72 bp | TTCCTCTCACCAGCTGCATGTCCTTCTTTTAAAACTTaGCCCAGGATGCAGTTTACTGTTGTGTTGACATTC | + |
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Preference number: 3 (lower is better) Translates to: FLSPAACPSFKT*PRMQFTVVLTF Trigger: GAATGTCAACACAACAGTAAACTGCATCCTGGGCCAAGTTTTAAAAGAAGGACATGCAGCTGGTGAGAGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155559.8 |
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| 3UTR CCA 72 bp | GTTTGTCAAAGGGTGGATTTCAAAACCTTGCTTTTATaGGTGTGGGACAGACTCACTAACAAGCTCTGGAAG | + |
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Preference number: 3 (lower is better) Translates to: VCQRVDFKTLLL*VWDRLTNKLWK Trigger: CTTCCAGAGCTTGTTAGTGAGTCTGTCCCACACCCATAAAAGCAAGGTTTTGAAATCCACCCTTTGACAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155559.8 |
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| 3UTR GCA 72 bp | TGGCCCAGGATGCAGTTTACTGTTGTGTTGACATTCTaGATATACAGTAAGGACTTGGAGAAAGCCAGTTAT | + |
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Preference number: 3 (lower is better) Translates to: WPRMQFTVVLTF*IYSKDLEKASY Trigger: ATAACTGGCTTTCTCCAAGTCCTTACTGTATATGCAGAATGTCAACACAACAGTAAACTGCATCCTGGGCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155559.8 |
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| 3UTR GCA 72 bp | CCAATTCAGTTTGTCAAAGGGTGGATTTCAAAACCTTaGTTTTATGGGTGTGGGACAGACTCACTAACAAGC | + |
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Preference number: 3 (lower is better) Translates to: PIQFVKGWISKP*FYGCGTDSLTS Trigger: GCTTGTTAGTGAGTCTGTCCCACACCCATAAAAGCAAGGTTTTGAAATCCACCCTTTGACAAACTGAATTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155559.8 |
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| CDS-3UTR CCA 90 bp | GCCTCCTCCCTGAGCTTGTGCCTTGGCCTCCAGTGCCCCAGGATGGAATGGGGCTCGCCCGGCCGGAGCTaGCGCTGCACTTGCGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: ASSLSLCLGLQCPRMEWGSPGRS*RCTCGQ Trigger: CTGGCCGCAAGTGCAGCGCCAGCTCCGGCCGGGCGA...GCCCCATTCCATCCTGGGGCACTGGAGGCCAAGGCACAAGCTCAGGGAGGAGGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
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| CDS-3UTR CCA 90 bp | GCCTCCTCCCTGAGCTTGTGCCTTGGCCTCCAGTGCCCCAGGATGGAATGGGGCGCAGCGCCTCCTGGCTaGCCAGGAGCCAGTCTTCGG | + |
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Preference number: 4 (lower is better) Translates to: ASSLSLCLGLQCPRMEWGAAPPG*PGASLR Trigger: CCGAAGACTGGCTCCTGGCCAGCCAGGAGGCGCTGC...GCCCCATTCCATCCTGGGGCACTGGAGGCCAAGGCACAAGCTCAGGGAGGAGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
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| CDS-3UTR CCA 90 bp | GCCTCCTCCCTGAGCTTGTGCCTTGGCCTCCAGTGCCCCAGGATGGAATGGGGCGACCCAGCTGGCCTCTaGTCGAAACTGGAGCGGGGG | + |
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Preference number: 4 (lower is better) Translates to: ASSLSLCLGLQCPRMEWGDPAGL*SKLERG Trigger: CCCCCGCTCCAGTTTCGACCAGAGGCCAGCTGGGTC...GCCCCATTCCATCCTGGGGCACTGGAGGCCAAGGCACAAGCTCAGGGAGGAGGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
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| CDS-3UTR TCA 90 bp | GCCTCCTCCCTGAGCTTGTGCCTTGGCCTCCAGTGCCCCAGGATGGAATGGGGCCCCGCATCACGTCGCTaGGCCTGTAGTCAGCCTGAG | + |
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Preference number: 4 (lower is better) Translates to: ASSLSLCLGLQCPRMEWGPASRR*ACSQPE Trigger: CTCAGGCTGACTACAGGCTCAGCGACGTGATGCGGG...GCCCCATTCCATCCTGGGGCACTGGAGGCCAAGGCACAAGCTCAGGGAGGAGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
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| CDS-3UTR CCA 90 bp | GCCTCCTCCCTGAGCTTGTGCCTTGGCCTCCAGTGCCCCAGGATGGAATGGGGCTCCAGGGCCAGGAGGTaGGGTTCTGTGAGGACAGGG | + |
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Preference number: 4 (lower is better) Translates to: ASSLSLCLGLQCPRMEWGSRARR*GSVRTG Trigger: CCCTGTCCTCACAGAACCCCACCTCCTGGCCCTGGA...GCCCCATTCCATCCTGGGGCACTGGAGGCCAAGGCACAAGCTCAGGGAGGAGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
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| CDS-3UTR CCA 90 bp | GCCTCCTCCCTGAGCTTGTGCCTTGGCCTCCAGTGCCCCAGGATGGAATGGGGCATCCCCAAGTGGAACTaGACCCAGCTGGCCTCTGGT | + |
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Preference number: 4 (lower is better) Translates to: ASSLSLCLGLQCPRMEWGIPKWN*TQLASG Trigger: ACCAGAGGCCAGCTGGGTCCAGTTCCACTTGGGGAT...GCCCCATTCCATCCTGGGGCACTGGAGGCCAAGGCACAAGCTCAGGGAGGAGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
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| CDS-3UTR CCA 90 bp | AGTGGATCCCGTTTGCCTTTTTCAAAGCGTTCCTGCCTCCTCCCTGAGCTTGTGTCGCCCGGCCGGAGCTaGCGCTGCACTTGCGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: SGSRLPFSKRSCLLPELVSPGRS*RCTCGQ Trigger: CTGGCCGCAAGTGCAGCGCCAGCTCCGGCCGGGCGA...CACAAGCTCAGGGAGGAGGCAGGAACGCTTTGAAAAAGGCAAACGGGATCCACT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
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| CDS-3UTR GCA 90 bp | GCTCAGAAGATAATCTGCAGTCCTGATGGAGCCAGAGCTCGTTGGGAAGAGAGAGGCCGGAGCTGGCGCTaGACTTGCGGCCAGAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: AQKIICSPDGARARWEERGRSWR*TCGQRW Trigger: CCACCTCTGGCCGCAAGTGCAGCGCCAGCTCCGGCC...TCTCTCTTCCCAACGAGCTCTGGCTCCATCAGGACTGCAGATTATCTTCTGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
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| CDS-3UTR CCA 90 bp | GCTCTGCCTGGCCAGGTTCAGAAGTCCCTTCCTCTCACCAGCTGCATGTCCTTCAACGGATCCAGGGGTTaGGCACAGACAGTCTGGGGG | + |
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Preference number: 4 (lower is better) Translates to: ALPGQVQKSLPLTSCMSFNGSRG*AQTVWG Trigger: CCCCCAGACTGTCTGTGCCCAACCCCTGGATCCGTT...GAAGGACATGCAGCTGGTGAGAGGAAGGGACTTCTGAACCTGGCCAGGCAGAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155559.8 |
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| CDS-3UTR TCA 90 bp | AGTGGATCCCGTTTGCCTTTTTCAAAGCGTTCCTGCCTCCTCCCTGAGCTTGTGGTCTGGGGGCTAGGTTaGGGGATGGCAGGAAGGCGG | + |
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Preference number: 4 (lower is better) Translates to: SGSRLPFSKRSCLLPELVVWGLG*GMAGRR Trigger: CCGCCTTCCTGCCATCCCTCAACCTAGCCCCCAGAC...CACAAGCTCAGGGAGGAGGCAGGAACGCTTTGAAAAAGGCAAACGGGATCCACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
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| CDS-3UTR TCA 90 bp | GCTCAGAAGATAATCTGCAGTCCTGATGGAGCCAGAGCTCGTTGGGAAGAGAGAGTCTGGGGGCTAGGTTaGGGGATGGCAGGAAGGCGG | + |
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Preference number: 4 (lower is better) Translates to: AQKIICSPDGARARWEERVWGLG*GMAGRR Trigger: CCGCCTTCCTGCCATCCCTCAACCTAGCCCCCAGAC...TCTCTCTTCCCAACGAGCTCTGGCTCCATCAGGACTGCAGATTATCTTCTGAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
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| CDS-3UTR GCA 90 bp | GGATCCCGTTTGCCTTTTTCAAAGCGTTCCTGCCTCCTCCCTGAGCTTGTGCCTCCAGCAGGTGTGGGTTaGCACAGACAGCGTACTCGG | + |
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Preference number: 4 (lower is better) Translates to: GSRLPFSKRSCLLPELVPPAGVG*HRQRTR Trigger: CCGAGTACGCTGTCTGTGGCAACCCACACCTGCTGG...AGGCACAAGCTCAGGGAGGAGGCAGGAACGCTTTGAAAAAGGCAAACGGGATCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
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| CDS-3UTR GCA 90 bp | TCCCGTTTGCCTTTTTCAAAGCGTTCCTGCCTCCTCCCTGAGCTTGTGCCTTGGCGCCGTGGGCCTCTATaGAGTCCTCCACGGTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: SRLPFSKRSCLLPELVPWRRGPL*SPPRSS Trigger: TGAAGACCGTGGAGGACTGCATAGAGGCCCACGGCG...CCAAGGCACAAGCTCAGGGAGGAGGCAGGAACGCTTTGAAAAAGGCAAACGGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
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| CDS-3UTR CCA 90 bp | CCAAACCTTCCAAGCCTGGTCCAGATCCAGGTTTCACAGTGTGCTCAGAAGATAGCAGCGCCTCCTGGCTaGCCAGGAGCCAGTCTTCGG | + |
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Preference number: 4 (lower is better) Translates to: PNLPSLVQIQVSQCAQKIAAPPG*PGASLR Trigger: CCGAAGACTGGCTCCTGGCCAGCCAGGAGGCGCTGC...TATCTTCTGAGCACACTGTGAAACCTGGATCTGGACCAGGCTTGGAAGGTTTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
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| CDS-3UTR CCA 90 bp | GGATCCCGTTTGCCTTTTTCAAAGCGTTCCTGCCTCCTCCCTGAGCTTGTGCCTAACGGATCCAGGGGTTaGGCACAGACAGTCTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GSRLPFSKRSCLLPELVPNGSRG*AQTVWG Trigger: CCCCCAGACTGTCTGTGCCCAACCCCTGGATCCGTT...AGGCACAAGCTCAGGGAGGAGGCAGGAACGCTTTGAAAAAGGCAAACGGGATCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
||
| CDS-3UTR CCA 90 bp | TTAAGCTCTGCCTGGCCAGGTTCAGAAGTCCCTTCCTCTCACCAGCTGCATGTCACTCTTCGCTCGCCGTaGGCCTCTATGCAGTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LSSAWPGSEVPSSHQLHVTLRSP*ASMQSS Trigger: GGAGGACTGCATAGAGGCCCACGGCGAGCGAAGAGT...GACATGCAGCTGGTGAGAGGAAGGGACTTCTGAACCTGGCCAGGCAGAGCTTAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155559.8 |
||
| CDS-3UTR TCA 90 bp | GCCTCCTCCCTGAGCTTGTGCCTTGGCCTCCAGTGCCCCAGGATGGAATGGGGCCATCCCCAAATTTGGTaGACATCTCATAATGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: ASSLSLCLGLQCPRMEWGHPQIW*TSHNGV Trigger: GACACCATTATGAGATGTTCACCAAATTTGGGGATG...GCCCCATTCCATCCTGGGGCACTGGAGGCCAAGGCACAAGCTCAGGGAGGAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
||
| CDS-3UTR TCA 90 bp | GGATCCCGTTTGCCTTTTTCAAAGCGTTCCTGCCTCCTCCCTGAGCTTGTGCCTCCACGGTCTTCAGGATaGTCTGGAGTCTGCGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GSRLPFSKRSCLLPELVPPRSSG*SGVCGP Trigger: TGGACCGCAGACTCCAGATCATCCTGAAGACCGTGG...AGGCACAAGCTCAGGGAGGAGGCAGGAACGCTTTGAAAAAGGCAAACGGGATCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
||
| CDS-3UTR GCA 90 bp | TTCCTCTCACCAGCTGCATGTCCTTCTTTTAAAACTTGGCCCAGGATGCAGTTTGGCCGGAGCTGGCGCTaGACTTGCGGCCAGAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: FLSPAACPSFKTWPRMQFGRSWR*TCGQRW Trigger: CCACCTCTGGCCGCAAGTGCAGCGCCAGCTCCGGCC...AAACTGCATCCTGGGCCAAGTTTTAAAAGAAGGACATGCAGCTGGTGAGAGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155559.8 |
||
| CDS-3UTR CCA 90 bp | TCCCGTTTGCCTTTTTCAAAGCGTTCCTGCCTCCTCCCTGAGCTTGTGCCTTGGCTGTTGATCCCCAAGTaGAACTGGACCCAGCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SRLPFSKRSCLLPELVPWLLIPK*NWTQLA Trigger: GGCCAGCTGGGTCCAGTTCCACTTGGGGATCAACAG...CCAAGGCACAAGCTCAGGGAGGAGGCAGGAACGCTTTGAAAAAGGCAAACGGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
||
| CDS-3UTR CCA 90 bp | GGATCCCGTTTGCCTTTTTCAAAGCGTTCCTGCCTCCTCCCTGAGCTTGTGCCTCTGGAGTACAGCCCGTaGCTGTTGATCCCCAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GSRLPFSKRSCLLPELVPLEYSP*LLIPKW Trigger: CCACTTGGGGATCAACAGCCACGGGCTGTACTCCAG...AGGCACAAGCTCAGGGAGGAGGCAGGAACGCTTTGAAAAAGGCAAACGGGATCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
||
| CDS-3UTR CCA 90 bp | GCTTCCAAACCTTCCAAGCCTGGTCCAGATCCAGGTTTCACAGTGTGCTCAGAATCCAGGGCCAGGAGGTaGGGTTCTGTGAGGACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: ASKPSKPGPDPGFTVCSESRARR*GSVRTG Trigger: CCCTGTCCTCACAGAACCCCACCTCCTGGCCCTGGA...TTCTGAGCACACTGTGAAACCTGGATCTGGACCAGGCTTGGAAGGTTTGGAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
||
| CDS-3UTR TCA 90 bp | CAGAAGATAATCTGCAGTCCTGATGGAGCCAGAGCTCGTTGGGAAGAGAGAGCCACAGCCCGTGGCTGTTaGTCCCCAAGTGGAACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: QKIICSPDGARARWEERATARGC*SPSGTG Trigger: TCCAGTTCCACTTGGGGATCAACAGCCACGGGCTGT...GGCTCTCTCTTCCCAACGAGCTCTGGCTCCATCAGGACTGCAGATTATCTTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
||
| CDS-3UTR GCA 90 bp | CTCTGCCTGGCCAGGTTCAGAAGTCCCTTCCTCTCACCAGCTGCATGTCCTTCTGCTCCTGAAAAGTTGTaGGAGGCTGTGCCAAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LCLARFRSPFLSPAACPSAPEKL*EAVPRS Trigger: AGACCTTGGCACAGCCTCGCACAACTTTTCAGGAGC...AGAAGGACATGCAGCTGGTGAGAGGAAGGGACTTCTGAACCTGGCCAGGCAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155559.8 |
||
| CDS-3UTR CCA 90 bp | AGTGGATCCCGTTTGCCTTTTTCAAAGCGTTCCTGCCTCCTCCCTGAGCTTGTGGGAACTGGACCCAGCTaGCCTCTGGTCGAAACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SGSRLPFSKRSCLLPELVGTGPS*PLVETG Trigger: TCCAGTTTCGACCAGAGGCCAGCTGGGTCCAGTTCC...CACAAGCTCAGGGAGGAGGCAGGAACGCTTTGAAAAAGGCAAACGGGATCCACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
||
| CDS-3UTR TCA 90 bp | GCTCAGAAGATAATCTGCAGTCCTGATGGAGCCAGAGCTCGTTGGGAAGAGAGAACAGCCCGTGGCTGTTaGTCCCCAAGTGGAACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: AQKIICSPDGARARWEERTARGC*SPSGTG Trigger: TCCAGTTCCACTTGGGGATCAACAGCCACGGGCTGT...TCTCTCTTCCCAACGAGCTCTGGCTCCATCAGGACTGCAGATTATCTTCTGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
||
| CDS-3UTR TCA 90 bp | GTCCAGATCCAGGTTTCACAGTGTGCTCAGAAGATAATCTGCAGTCCTGATGGACCCGCATCACGTCGCTaGGCCTGTAGTCAGCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: VQIQVSQCAQKIICSPDGPASRR*ACSQPE Trigger: CTCAGGCTGACTACAGGCTCAGCGACGTGATGCGGG...TCCATCAGGACTGCAGATTATCTTCTGAGCACACTGTGAAACCTGGATCTGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
||
| CDS-3UTR CCA 90 bp | TCCAAGCCTGGTCCAGATCCAGGTTTCACAGTGTGCTCAGAAGATAATCTGCAGACTCTTCGCTCGCCGTaGGCCTCTATGCAGTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SKPGPDPGFTVCSEDNLQTLRSP*ASMQSS Trigger: GGAGGACTGCATAGAGGCCCACGGCGAGCGAAGAGT...CTGCAGATTATCTTCTGAGCACACTGTGAAACCTGGATCTGGACCAGGCTTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
||
| CDS-3UTR TCA 90 bp | AGTGGATCCCGTTTGCCTTTTTCAAAGCGTTCCTGCCTCCTCCCTGAGCTTGTGCCACTCCTCTTTTCCTaGCAGCGAGTAGGAACGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SGSRLPFSKRSCLLPELVPLLFS*QRVGTD Trigger: ATCCGTTCCTACTCGCTGTCAGGAAAAGAGGAGTGG...CACAAGCTCAGGGAGGAGGCAGGAACGCTTTGAAAAAGGCAAACGGGATCCACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
||
| CDS-3UTR TCA 90 bp | TCCAAGCCTGGTCCAGATCCAGGTTTCACAGTGTGCTCAGAAGATAATCTGCAGCCACGGTCTTCAGGATaGTCTGGAGTCTGCGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SKPGPDPGFTVCSEDNLQPRSSG*SGVCGP Trigger: TGGACCGCAGACTCCAGATCATCCTGAAGACCGTGG...CTGCAGATTATCTTCTGAGCACACTGTGAAACCTGGATCTGGACCAGGCTTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
||
| CDS-3UTR GCA 90 bp | AGTGGATCCCGTTTGCCTTTTTCAAAGCGTTCCTGCCTCCTCCCTGAGCTTGTGGCTCCTGAAAAGTTGTaGGAGGCTGTGCCAAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SGSRLPFSKRSCLLPELVAPEKL*EAVPRS Trigger: AGACCTTGGCACAGCCTCGCACAACTTTTCAGGAGC...CACAAGCTCAGGGAGGAGGCAGGAACGCTTTGAAAAAGGCAAACGGGATCCACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
||
| CDS-3UTR CCA 90 bp | GAAGTCCCTTCCTCTCACCAGCTGCATGTCCTTCTTTTAAAACTTGGCCCAGGAATCCCCAAGTGGAACTaGACCCAGCTGGCCTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: EVPSSHQLHVLLLKLGPGIPKWN*TQLASG Trigger: ACCAGAGGCCAGCTGGGTCCAGTTCCACTTGGGGAT...TCCTGGGCCAAGTTTTAAAAGAAGGACATGCAGCTGGTGAGAGGAAGGGACTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000155559.8 |
||
| CDS-3UTR CCA 90 bp | TCCAAGCCTGGTCCAGATCCAGGTTTCACAGTGTGCTCAGAAGATAATCTGCAGCTGGAGTACAGCCCGTaGCTGTTGATCCCCAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SKPGPDPGFTVCSEDNLQLEYSP*LLIPKW Trigger: CCACTTGGGGATCAACAGCCACGGGCTGTACTCCAG...CTGCAGATTATCTTCTGAGCACACTGTGAAACCTGGATCTGGACCAGGCTTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
||
| CDS-3UTR CCA 90 bp | CTGCTGCTTAAGCTCTGCCTGGCCAGGTTCAGAAGTCCCTTCCTCTCACCAGCTAAGTGTCTCATGTCATaGAGGAGCTTGCTGATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LLLKLCLARFRSPFLSPAKCLMS*RSLLMA Trigger: TGCCATCAGCAAGCTCCTCCATGACATGAGACACTT...AGCTGGTGAGAGGAAGGGACTTCTGAACCTGGCCAGGCAGAGCTTAAGCAGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155559.8 |
||
| CDS-3UTR CCA 90 bp | AGTGGATCCCGTTTGCCTTTTTCAAAGCGTTCCTGCCTCCTCCCTGAGCTTGTGAGGACAGGGCTGAGCTaGTCTTCTAGAAGTGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: SGSRLPFSKRSCLLPELVRTGLS*SSRSDS Trigger: GGAGTCACTTCTAGAAGACCAGCTCAGCCCTGTCCT...CACAAGCTCAGGGAGGAGGCAGGAACGCTTTGAAAAAGGCAAACGGGATCCACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
||
| CDS-3UTR TCA 90 bp | AGTGGATCCCGTTTGCCTTTTTCAAAGCGTTCCTGCCTCCTCCCTGAGCTTGTGGCTGTCTCATGGGTTTaGACATGGCTTTCCCGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SGSRLPFSKRSCLLPELVAVSWV*TWLSRS Trigger: ACTTCGGGAAAGCCATGTTCAAACCCATGAGACAGC...CACAAGCTCAGGGAGGAGGCAGGAACGCTTTGAAAAAGGCAAACGGGATCCACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
||
| CDS-3UTR TCA 90 bp | GCTTCCAAACCTTCCAAGCCTGGTCCAGATCCAGGTTTCACAGTGTGCTCAGAACCACTCCTCTTTTCCTaGCAGCGAGTAGGAACGGAT | + |
|
Preference number: 4 (lower is better) Translates to: ASKPSKPGPDPGFTVCSEPLLFS*QRVGTD Trigger: ATCCGTTCCTACTCGCTGTCAGGAAAAGAGGAGTGG...TTCTGAGCACACTGTGAAACCTGGATCTGGACCAGGCTTGGAAGGTTTGGAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
||
| CDS-3UTR GCA 90 bp | AAACCTTCCAAGCCTGGTCCAGATCCAGGTTTCACAGTGTGCTCAGAAGATAATCCAGCAGGTGTGGGTTaGCACAGACAGCGTACTCGG | + |
|
Preference number: 4 (lower is better) Translates to: KPSKPGPDPGFTVCSEDNPAGVG*HRQRTR Trigger: CCGAGTACGCTGTCTGTGGCAACCCACACCTGCTGG...ATTATCTTCTGAGCACACTGTGAAACCTGGATCTGGACCAGGCTTGGAAGGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
||
| CDS-3UTR CCA 90 bp | GCTCAGAAGATAATCTGCAGTCCTGATGGAGCCAGAGCTCGTTGGGAAGAGAGATCAGGTGGACCCCACTaGGTTTCACAATCTGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: AQKIICSPDGARARWEERSGGPH*VSQSVS Trigger: GCTCACAGATTGTGAAACCCAGTGGGGTCCACCTGA...TCTCTCTTCCCAACGAGCTCTGGCTCCATCAGGACTGCAGATTATCTTCTGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
||
| CDS-3UTR TCA 90 bp | CAGAAGATAATCTGCAGTCCTGATGGAGCCAGAGCTCGTTGGGAAGAGAGAGCCCTAGGATTTCCTTGGTaGCATTCACTAGCCTCCCTA | + |
|
Preference number: 4 (lower is better) Translates to: QKIICSPDGARARWEERALGFPW*HSLASL Trigger: TAGGGAGGCTAGTGAATGTCACCAAGGAAATCCTAG...GGCTCTCTCTTCCCAACGAGCTCTGGCTCCATCAGGACTGCAGATTATCTTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
||
| CDS-3UTR GCA 90 bp | GCTCAGAAGATAATCTGCAGTCCTGATGGAGCCAGAGCTCGTTGGGAAGAGAGACGAGGAGTCTGTTGCTaGTGTTGTACGGGTAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: AQKIICSPDGARARWEERRGVCC*CCTGRS Trigger: AGATCTACCCGTACAACAGCAGCAACAGACTCCTCG...TCTCTCTTCCCAACGAGCTCTGGCTCCATCAGGACTGCAGATTATCTTCTGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
||
| CDS-3UTR CCA 90 bp | AAACCTTCCAAGCCTGGTCCAGATCCAGGTTTCACAGTGTGCTCAGAAGATAATCTGTTGATCCCCAAGTaGAACTGGACCCAGCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: KPSKPGPDPGFTVCSEDNLLIPK*NWTQLA Trigger: GGCCAGCTGGGTCCAGTTCCACTTGGGGATCAACAG...ATTATCTTCTGAGCACACTGTGAAACCTGGATCTGGACCAGGCTTGGAAGGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
||
| CDS-3UTR CCA 90 bp | AGTGGATCCCGTTTGCCTTTTTCAAAGCGTTCCTGCCTCCTCCCTGAGCTTGTGAGAACCAATTTCAGGTaGACCCCACTGGGTTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: SGSRLPFSKRSCLLPELVRTNFR*TPLGFT Trigger: TGTGAAACCCAGTGGGGTCCACCTGAAATTGGTTCT...CACAAGCTCAGGGAGGAGGCAGGAACGCTTTGAAAAAGGCAAACGGGATCCACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
||
| CDS-3UTR CCA 90 bp | GCTTCCAAACCTTCCAAGCCTGGTCCAGATCCAGGTTTCACAGTGTGCTCAGAAAGAATCCTGTCCAGGTaGAAAGCTGCGATCTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ASKPSKPGPDPGFTVCSERILSR*KAAISA Trigger: TGCTGAGATCGCAGCTTTCCACCTGGACAGGATTCT...TTCTGAGCACACTGTGAAACCTGGATCTGGACCAGGCTTGGAAGGTTTGGAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
||
| 3UTR CAA 72 bp | CACCCAAGGATAAAGATGAGGTTCAGTGGATCCCGTTaGCCTTTTTCAAAGCGTTCCTGCCTCCTCCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: HPRIKMRFSGSR*PFSKRSCLLPE Trigger: CTCAGGGAGGAGGCAGGAACGCTTTGAAAAAGGCAAACGGGATCCACTGAACCTCATCTTTATCCTTGGGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
||
| CDS-3UTR TCA 90 bp | TCCAAGCCTGGTCCAGATCCAGGTTTCACAGTGTGCTCAGAAGATAATCTGCAGGCTGTCTCATGGGTTTaGACATGGCTTTCCCGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SKPGPDPGFTVCSEDNLQAVSWV*TWLSRS Trigger: ACTTCGGGAAAGCCATGTTCAAACCCATGAGACAGC...CTGCAGATTATCTTCTGAGCACACTGTGAAACCTGGATCTGGACCAGGCTTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
||
| CDS-3UTR TCA 90 bp | CCAAACCTTCCAAGCCTGGTCCAGATCCAGGTTTCACAGTGTGCTCAGAAGATAGGATCTCGTTCTTGGTaGCCTCTAGGATTTCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PNLPSLVQIQVSQCAQKIGSRSW*PLGFPW Trigger: CCAAGGAAATCCTAGAGGTCACCAAGAACGAGATCC...TATCTTCTGAGCACACTGTGAAACCTGGATCTGGACCAGGCTTGGAAGGTTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
||
| CDS-3UTR TCA 90 bp | TCCCGTTTGCCTTTTTCAAAGCGTTCCTGCCTCCTCCCTGAGCTTGTGCCTTGGAGAGTGTTTTCCTTTTaGTCATGCAACACTGCGCTA | + |
|
Preference number: 4 (lower is better) Translates to: SRLPFSKRSCLLPELVPWRVFSF*SCNTAL Trigger: TAGCGCAGTGTTGCATGATCAAAAGGAAAACACTCT...CCAAGGCACAAGCTCAGGGAGGAGGCAGGAACGCTTTGAAAAAGGCAAACGGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
||
| CDS-3UTR GCA 90 bp | TCCAAGCCTGGTCCAGATCCAGGTTTCACAGTGTGCTCAGAAGATAATCTGCAGGTCCAGGTGGAAAGCTaGGATCTCAGCATTGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SKPGPDPGFTVCSEDNLQVQVES*DLSIVS Trigger: AGACACAATGCTGAGATCGCAGCTTTCCACCTGGAC...CTGCAGATTATCTTCTGAGCACACTGTGAAACCTGGATCTGGACCAGGCTTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
||
| CDS-3UTR CCA 90 bp | AAGCTCTGGAAGGGGAAGGTTCTGTCCAAAGCCATGGCGTTGTTTTCACAGGACAGAACCAATTTCAGGTaGACCCCACTGGGTTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: KLWKGKVLSKAMALFSQDRTNFR*TPLGFT Trigger: TGTGAAACCCAGTGGGGTCCACCTGAAATTGGTTCT...GTCCTGTGAAAACAACGCCATGGCTTTGGACAGAACCTTCCCCTTCCAGAGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000155559.8 |
||
| CDS-3UTR TCA 90 bp | GTCCAGATCCAGGTTTCACAGTGTGCTCAGAAGATAATCTGCAGTCCTGATGGAGGATCTCGTTCTTGGTaGCCTCTAGGATTTCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VQIQVSQCAQKIICSPDGGSRSW*PLGFPW Trigger: CCAAGGAAATCCTAGAGGTCACCAAGAACGAGATCC...TCCATCAGGACTGCAGATTATCTTCTGAGCACACTGTGAAACCTGGATCTGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
||
| CDS-3UTR GCA 90 bp | AGGATGCAGTTTACTGTTGTGTTGACATTCTGCATATACAGTAAGGACTTGGAGCGCCGTGGGCCTCTATaGAGTCCTCCACGGTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RMQFTVVLTFCIYSKDLERRGPL*SPPRSS Trigger: TGAAGACCGTGGAGGACTGCATAGAGGCCCACGGCG...CTCCAAGTCCTTACTGTATATGCAGAATGTCAACACAACAGTAAACTGCATCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155559.8 |
||
| CDS-3UTR CCA 90 bp | TCCAAGCCTGGTCCAGATCCAGGTTTCACAGTGTGCTCAGAAGATAATCTGCAGAAGTGTCTCATGTCATaGAGGAGCTTGCTGATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SKPGPDPGFTVCSEDNLQKCLMS*RSLLMA Trigger: TGCCATCAGCAAGCTCCTCCATGACATGAGACACTT...CTGCAGATTATCTTCTGAGCACACTGTGAAACCTGGATCTGGACCAGGCTTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
||
| CDS-3UTR CCA 90 bp | TTCCTCTCACCAGCTGCATGTCCTTCTTTTAAAACTTGGCCCAGGATGCAGTTTTCAGGTGGACCCCACTaGGTTTCACAATCTGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: FLSPAACPSFKTWPRMQFSGGPH*VSQSVS Trigger: GCTCACAGATTGTGAAACCCAGTGGGGTCCACCTGA...AAACTGCATCCTGGGCCAAGTTTTAAAAGAAGGACATGCAGCTGGTGAGAGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000155559.8 |
||
| CDS-3UTR CCA 90 bp | GCTCAGAAGATAATCTGCAGTCCTGATGGAGCCAGAGCTCGTTGGGAAGAGAGAGCACACGTTGTTAGCTaGAGACACAAAGAACACACT | + |
|
Preference number: 4 (lower is better) Translates to: AQKIICSPDGARARWEERAHVVS*RHKEHT Trigger: AGTGTGTTCTTTGTGTCTCCAGCTAACAACGTGTGC...TCTCTCTTCCCAACGAGCTCTGGCTCCATCAGGACTGCAGATTATCTTCTGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
||
| CDS-3UTR CCA 90 bp | TCCAAGCCTGGTCCAGATCCAGGTTTCACAGTGTGCTCAGAAGATAATCTGCAGACATGTACGGACACTTaGCGAAGAAGCACACGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SKPGPDPGFTVCSEDNLQTCTDT*RRSTRC Trigger: ACAACGTGTGCTTCTTCGCCAAGTGTCCGTACATGT...CTGCAGATTATCTTCTGAGCACACTGTGAAACCTGGATCTGGACCAGGCTTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
||
| CDS-3UTR TCA 90 bp | GCTTCCAAACCTTCCAAGCCTGGTCCAGATCCAGGTTTCACAGTGTGCTCAGAACTGGCATTGTCAAGATaGATAAGGTATCCATCATCC | + |
|
Preference number: 4 (lower is better) Translates to: ASKPSKPGPDPGFTVCSELALSR*IRYPSS Trigger: GGATGATGGATACCTTATTCATCTTGACAATGCCAG...TTCTGAGCACACTGTGAAACCTGGATCTGGACCAGGCTTGGAAGGTTTGGAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
||
| CDS-3UTR TCA 90 bp | GCTCAGAAGATAATCTGCAGTCCTGATGGAGCCAGAGCTCGTTGGGAAGAGAGAAGAGTGTTTTCCTTTTaGTCATGCAACACTGCGCTA | + |
|
Preference number: 4 (lower is better) Translates to: AQKIICSPDGARARWEERRVFSF*SCNTAL Trigger: TAGCGCAGTGTTGCATGATCAAAAGGAAAACACTCT...TCTCTCTTCCCAACGAGCTCTGGCTCCATCAGGACTGCAGATTATCTTCTGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
||
| CDS-3UTR GCA 90 bp | TTCCTCTCACCAGCTGCATGTCCTTCTTTTAAAACTTGGCCCAGGATGCAGTTTCGAGGAGTCTGTTGCTaGTGTTGTACGGGTAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: FLSPAACPSFKTWPRMQFRGVCC*CCTGRS Trigger: AGATCTACCCGTACAACAGCAGCAACAGACTCCTCG...AAACTGCATCCTGGGCCAAGTTTTAAAAGAAGGACATGCAGCTGGTGAGAGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155559.8 |
||
| CDS-3UTR CCA 90 bp | AGGATGCAGTTTACTGTTGTGTTGACATTCTGCATATACAGTAAGGACTTGGAGGGAACTGGACCCAGCTaGCCTCTGGTCGAAACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RMQFTVVLTFCIYSKDLEGTGPS*PLVETG Trigger: TCCAGTTTCGACCAGAGGCCAGCTGGGTCCAGTTCC...CTCCAAGTCCTTACTGTATATGCAGAATGTCAACACAACAGTAAACTGCATCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155559.8 |
||
| CDS-3UTR CCA 90 bp | AAACCTTCCAAGCCTGGTCCAGATCCAGGTTTCACAGTGTGCTCAGAAGATAATAGAATCCTGTCCAGGTaGAAAGCTGCGATCTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: KPSKPGPDPGFTVCSEDNRILSR*KAAISA Trigger: TGCTGAGATCGCAGCTTTCCACCTGGACAGGATTCT...ATTATCTTCTGAGCACACTGTGAAACCTGGATCTGGACCAGGCTTGGAAGGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
||
| CDS-3UTR CCA 90 bp | TCCAAGCCTGGTCCAGATCCAGGTTTCACAGTGTGCTCAGAAGATAATCTGCAGATAGAGATTTCATCCTaGGAATGTCGTCCGAACCCT | + |
|
Preference number: 4 (lower is better) Translates to: SKPGPDPGFTVCSEDNLQIEISS*ECRPNP Trigger: AGGGTTCGGACGACATTCCCAGGATGAAATCTCTAT...CTGCAGATTATCTTCTGAGCACACTGTGAAACCTGGATCTGGACCAGGCTTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
||
| CDS-3UTR CCA 90 bp | GTCCAGATCCAGGTTTCACAGTGTGCTCAGAAGATAATCTGCAGTCCTGATGGAGCACACGTTGTTAGCTaGAGACACAAAGAACACACT | + |
|
Preference number: 4 (lower is better) Translates to: VQIQVSQCAQKIICSPDGAHVVS*RHKEHT Trigger: AGTGTGTTCTTTGTGTCTCCAGCTAACAACGTGTGC...TCCATCAGGACTGCAGATTATCTTCTGAGCACACTGTGAAACCTGGATCTGGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
||
| CDS-3UTR CCA 90 bp | GTCCAGATCCAGGTTTCACAGTGTGCTCAGAAGATAATCTGCAGTCCTGATGGAATAGAGATTTCATCCTaGGAATGTCGTCCGAACCCT | + |
|
Preference number: 4 (lower is better) Translates to: VQIQVSQCAQKIICSPDGIEISS*ECRPNP Trigger: AGGGTTCGGACGACATTCCCAGGATGAAATCTCTAT...TCCATCAGGACTGCAGATTATCTTCTGAGCACACTGTGAAACCTGGATCTGGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
||
| CDS-3UTR TCA 90 bp | AAACCTTCCAAGCCTGGTCCAGATCCAGGTTTCACAGTGTGCTCAGAAGATAATCATCCCCAAATTTGGTaGACATCTCATAATGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: KPSKPGPDPGFTVCSEDNHPQIW*TSHNGV Trigger: GACACCATTATGAGATGTTCACCAAATTTGGGGATG...ATTATCTTCTGAGCACACTGTGAAACCTGGATCTGGACCAGGCTTGGAAGGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
||
| CDS-3UTR TCA 90 bp | AAACCTTCCAAGCCTGGTCCAGATCCAGGTTTCACAGTGTGCTCAGAAGATAATCTGGCATTGTCAAGATaGATAAGGTATCCATCATCC | + |
|
Preference number: 4 (lower is better) Translates to: KPSKPGPDPGFTVCSEDNLALSR*IRYPSS Trigger: GGATGATGGATACCTTATTCATCTTGACAATGCCAG...ATTATCTTCTGAGCACACTGTGAAACCTGGATCTGGACCAGGCTTGGAAGGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
||
| 3UTR CAA 72 bp | TGGACTCCTGGTTTTACAAGATCCACCTGTAGCTGCTaGAGGATCTTACACATCAAGATTTGTTTCTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: WTPGFTRSTCSC*RILHIKICFCF Trigger: GAAACAGAAACAAATCTTGATGTGTAAGATCCTCAAGCAGCTACAGGTGGATCTTGTAAAACCAGGAGTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155559.8 |
||
| 3UTR CAA 72 bp | TCCAATTCAGTTTGTCAAAGGGTGGATTTCAAAACCTaGCTTTTATGGGTGTGGGACAGACTCACTAACAAG | + |
|
Preference number: 4 (lower is better) Translates to: SNSVCQRVDFKT*LLWVWDRLTNK Trigger: CTTGTTAGTGAGTCTGTCCCACACCCATAAAAGCAAGGTTTTGAAATCCACCCTTTGACAAACTGAATTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155559.8 |
||
| 3UTR CAA 72 bp | TTTAAAACTTGGCCCAGGATGCAGTTTACTGTTGTGTaGACATTCTGCATATACAGTAAGGACTTGGAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: FKTWPRMQFTVV*TFCIYSKDLEK Trigger: TTTCTCCAAGTCCTTACTGTATATGCAGAATGTCAACACAACAGTAAACTGCATCCTGGGCCAAGTTTTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155559.8 |
||
| CDS-3UTR CAA 90 bp | GCCTCCTCCCTGAGCTTGTGCCTTGGCCTCCAGTGCCCCAGGATGGAATGGGGCGAGCTGGCGCTGCACTaGCGGCCAGAGGTGGAAGTA | + |
|
Preference number: 5 (lower is better) Translates to: ASSLSLCLGLQCPRMEWGELALH*RPEVEV Trigger: TACTTCCACCTCTGGCCGCAAGTGCAGCGCCAGCTC...GCCCCATTCCATCCTGGGGCACTGGAGGCCAAGGCACAAGCTCAGGGAGGAGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
||
| CDS TCA 90 bp | CCTGGCCGGAGTCTGGAGCCGAACGTTGTGCTGACCCTTCGGCTATaGCTCTTCGCTCGCCGTGGGCCTCTATGCAGTCCTCCACGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: PGRSLEPNVVLTLRL*LFARRGPLCSPPRS Trigger: AGACCGTGGAGGACTGCATAGAGGCCCACGGCGAGCGAAGAGTCATAGCCGAAGGGTCAGCACAACGTTCGGCTCCAGACTCCGGCCAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
||
| CDS GCA 90 bp | GGGATGGCAGGAAGGCGGAGAGGGAGCCTTCCAGCAGGTGTGGGTTaGCACAGACAGCGTACTCGGTCTTGCACATGTACGGACACTTGG | + |
|
Preference number: 5 (lower is better) Translates to: GMAGRRRGSLPAGVG*HRQRTRSCTCTDTW Trigger: CCAAGTGTCCGTACATGTGCAAGACCGAGTACGCTGTCTGTGGCAACCCACACCTGCTGGAAGGCTCCCTCTCCGCCTTCCTGCCATCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
||
| CDS CCA 90 bp | GTTGAGGGATGGCAGGAAGGCGGAGAGGGAGCCTTCCAGCAGGTGTaGGTTGCCACAGACAGCGTACTCGGTCTTGCACATGTACGGACA | + |
|
Preference number: 5 (lower is better) Translates to: VEGWQEGGEGAFQQV*VATDSVLGLAHVRT Trigger: TGTCCGTACATGTGCAAGACCGAGTACGCTGTCTGTGGCAACCCACACCTGCTGGAAGGCTCCCTCTCCGCCTTCCTGCCATCCCTCAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
||
| CDS CCA 90 bp | CCCGTGGCTGTTGATCCCCAAGTGGAACTGGACCCAGCTGGCCTCTaGTCGAAACTGGAGCGGGGGATCCAAGGAGGTAAGGTTGAATTG | + |
|
Preference number: 5 (lower is better) Translates to: PVAVDPQVELDPAGL*SKLERGIQGGKVEL Trigger: CAATTCAACCTTACCTCCTTGGATCCCCCGCTCCAGTTTCGACCAGAGGCCAGCTGGGTCCAGTTCCACTTGGGGATCAACAGCCACGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
||
| CDS-3UTR CAA 90 bp | TCCCGTTTGCCTTTTTCAAAGCGTTCCTGCCTCCTCCCTGAGCTTGTGCCTTGGGAACGGATCCAGGGGTaGGGCACAGACAGTCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SRLPFSKRSCLLPELVPWERIQG*GTDSLG Trigger: CCCCAGACTGTCTGTGCCCAACCCCTGGATCCGTTC...CCAAGGCACAAGCTCAGGGAGGAGGCAGGAACGCTTTGAAAAAGGCAAACGGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
||
| CDS-3UTR CAA 90 bp | GCTCTGCCTGGCCAGGTTCAGAAGTCCCTTCCTCTCACCAGCTGCATGTCCTTCATGTCATGGAGGAGCTaGCTGATGGCAAGGCTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: ALPGQVQKSLPLTSCMSFMSWRS*LMARLD Trigger: GTCCAGCCTTGCCATCAGCAAGCTCCTCCATGACAT...GAAGGACATGCAGCTGGTGAGAGGAAGGGACTTCTGAACCTGGCCAGGCAGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155559.8 |
||
| CDS-3UTR CAA 90 bp | CAGAAGATAATCTGCAGTCCTGATGGAGCCAGAGCTCGTTGGGAAGAGAGAGCCAGTCTGGGGGCTAGGTaGAGGGATGGCAGGAAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: QKIICSPDGARARWEERASLGAR*RDGRKA Trigger: CGCCTTCCTGCCATCCCTCAACCTAGCCCCCAGACT...GGCTCTCTCTTCCCAACGAGCTCTGGCTCCATCAGGACTGCAGATTATCTTCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
||
| CDS-3UTR CAA 90 bp | AGTGGATCCCGTTTGCCTTTTTCAAAGCGTTCCTGCCTCCTCCCTGAGCTTGTGAGTCTGGGGGCTAGGTaGAGGGATGGCAGGAAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: SGSRLPFSKRSCLLPELVSLGAR*RDGRKA Trigger: CGCCTTCCTGCCATCCCTCAACCTAGCCCCCAGACT...CACAAGCTCAGGGAGGAGGCAGGAACGCTTTGAAAAAGGCAAACGGGATCCACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
||
| CDS-3UTR CAA 90 bp | GCTTCCAAACCTTCCAAGCCTGGTCCAGATCCAGGTTTCACAGTGTGCTCAGAAGAACGGATCCAGGGGTaGGGCACAGACAGTCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: ASKPSKPGPDPGFTVCSEERIQG*GTDSLG Trigger: CCCCAGACTGTCTGTGCCCAACCCCTGGATCCGTTC...TTCTGAGCACACTGTGAAACCTGGATCTGGACCAGGCTTGGAAGGTTTGGAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
||
| CDS-3UTR CAA 90 bp | GCCTCCTCCCTGAGCTTGTGCCTTGGCCTCCAGTGCCCCAGGATGGAATGGGGCAAGAGTGTTTTCCTTTaGATCATGCAACACTGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: ASSLSLCLGLQCPRMEWGKSVFL*IMQHCA Trigger: AGCGCAGTGTTGCATGATCAAAAGGAAAACACTCTT...GCCCCATTCCATCCTGGGGCACTGGAGGCCAAGGCACAAGCTCAGGGAGGAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
||
| CDS-3UTR CAA 90 bp | CCAAACCTTCCAAGCCTGGTCCAGATCCAGGTTTCACAGTGTGCTCAGAAGATAGAGCTGGCGCTGCACTaGCGGCCAGAGGTGGAAGTA | + |
|
Preference number: 5 (lower is better) Translates to: PNLPSLVQIQVSQCAQKIELALH*RPEVEV Trigger: TACTTCCACCTCTGGCCGCAAGTGCAGCGCCAGCTC...TATCTTCTGAGCACACTGTGAAACCTGGATCTGGACCAGGCTTGGAAGGTTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
||
| CDS-3UTR CAA 90 bp | GCTCAGAAGATAATCTGCAGTCCTGATGGAGCCAGAGCTCGTTGGGAAGAGAGACGGATCCTCCAGGACTaGGTAGAGCGAGTGGGCGAA | + |
|
Preference number: 5 (lower is better) Translates to: AQKIICSPDGARARWEERRILQD*VERVGE Trigger: TTCGCCCACTCGCTCTACCAAGTCCTGGAGGATCCG...TCTCTCTTCCCAACGAGCTCTGGCTCCATCAGGACTGCAGATTATCTTCTGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
||
| CDS-3UTR CAA 90 bp | TCCCGTTTGCCTTTTTCAAAGCGTTCCTGCCTCCTCCCTGAGCTTGTGCCTTGGATGTCATGGAGGAGCTaGCTGATGGCAAGGCTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: SRLPFSKRSCLLPELVPWMSWRS*LMARLD Trigger: GTCCAGCCTTGCCATCAGCAAGCTCCTCCATGACAT...CCAAGGCACAAGCTCAGGGAGGAGGCAGGAACGCTTTGAAAAAGGCAAACGGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
||
| CDS-3UTR CAA 90 bp | AAGCTCTGGAAGGGGAAGGTTCTGTCCAAAGCCATGGCGTTGTTTTCACAGGACCTAGCCTCCCTACTGTaGGCGGTACCCGTCGGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: KLWKGKVLSKAMALFSQDLASLL*AVPVGS Trigger: ACTTCCGACGGGTACCGCCAACAGTAGGGAGGCTAG...GTCCTGTGAAAACAACGCCATGGCTTTGGACAGAACCTTCCCCTTCCAGAGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155559.8 |
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| CDS-3UTR CAA 90 bp | GCTTCCAAACCTTCCAAGCCTGGTCCAGATCCAGGTTTCACAGTGTGCTCAGAATCCAGCAGGTGTGGGTaGCCACAGACAGCGTACTCG | + |
|
Preference number: 5 (lower is better) Translates to: ASKPSKPGPDPGFTVCSESSRCG*PQTAYS Trigger: CGAGTACGCTGTCTGTGGCAACCCACACCTGCTGGA...TTCTGAGCACACTGTGAAACCTGGATCTGGACCAGGCTTGGAAGGTTTGGAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
||
| CDS-3UTR CAA 90 bp | CCAAACCTTCCAAGCCTGGTCCAGATCCAGGTTTCACAGTGTGCTCAGAAGATACGGATCCTCCAGGACTaGGTAGAGCGAGTGGGCGAA | + |
|
Preference number: 5 (lower is better) Translates to: PNLPSLVQIQVSQCAQKIRILQD*VERVGE Trigger: TTCGCCCACTCGCTCTACCAAGTCCTGGAGGATCCG...TATCTTCTGAGCACACTGTGAAACCTGGATCTGGACCAGGCTTGGAAGGTTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
||
| CDS-3UTR CAA 90 bp | GCCTCCTCCCTGAGCTTGTGCCTTGGCCTCCAGTGCCCCAGGATGGAATGGGGCTCCAAGGAGGTAAGGTaGAATTGTTCTTTGTATATC | + |
|
Preference number: 5 (lower is better) Translates to: ASSLSLCLGLQCPRMEWGSKEVR*NCSLYI Trigger: GATATACAAAGAACAATTCAACCTTACCTCCTTGGA...GCCCCATTCCATCCTGGGGCACTGGAGGCCAAGGCACAAGCTCAGGGAGGAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
||
| CDS-3UTR CAA 90 bp | TCCCGTTTGCCTTTTTCAAAGCGTTCCTGCCTCCTCCCTGAGCTTGTGCCTTGGCACATGTACGGACACTaGGCGAAGAAGCACACGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SRLPFSKRSCLLPELVPWHMYGH*AKKHTL Trigger: CAACGTGTGCTTCTTCGCCAAGTGTCCGTACATGTG...CCAAGGCACAAGCTCAGGGAGGAGGCAGGAACGCTTTGAAAAAGGCAAACGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
||
| CDS-3UTR CAA 90 bp | TTAAGCTCTGCCTGGCCAGGTTCAGAAGTCCCTTCCTCTCACCAGCTGCATGTCCACATGTACGGACACTaGGCGAAGAAGCACACGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LSSAWPGSEVPSSHQLHVHMYGH*AKKHTL Trigger: CAACGTGTGCTTCTTCGCCAAGTGTCCGTACATGTG...GACATGCAGCTGGTGAGAGGAAGGGACTTCTGAACCTGGCCAGGCAGAGCTTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155559.8 |
||
| CDS-3UTR CAA 90 bp | CCAAACCTTCCAAGCCTGGTCCAGATCCAGGTTTCACAGTGTGCTCAGAAGATATCCAGCAGGTGTGGGTaGCCACAGACAGCGTACTCG | + |
|
Preference number: 5 (lower is better) Translates to: PNLPSLVQIQVSQCAQKISSRCG*PQTAYS Trigger: CGAGTACGCTGTCTGTGGCAACCCACACCTGCTGGA...TATCTTCTGAGCACACTGTGAAACCTGGATCTGGACCAGGCTTGGAAGGTTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
||
| CDS-3UTR CAA 90 bp | GTCCAGATCCAGGTTTCACAGTGTGCTCAGAAGATAATCTGCAGTCCTGATGGACTAGCCTCCCTACTGTaGGCGGTACCCGTCGGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: VQIQVSQCAQKIICSPDGLASLL*AVPVGS Trigger: ACTTCCGACGGGTACCGCCAACAGTAGGGAGGCTAG...TCCATCAGGACTGCAGATTATCTTCTGAGCACACTGTGAAACCTGGATCTGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
||
| CDS CCA 90 bp | TTGATCCCCAAGTGGAACTGGACCCAGCTGGCCTCTGGTCGAAACTaGAGCGGGGGATCCAAGGAGGTAAGGTTGAATTGTTCTTTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: LIPKWNWTQLASGRN*SGGSKEVRLNCSLY Trigger: ATACAAAGAACAATTCAACCTTACCTCCTTGGATCCCCCGCTCCAGTTTCGACCAGAGGCCAGCTGGGTCCAGTTCCACTTGGGGATCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
||
| CDS-3UTR CAA 90 bp | GGATCCCGTTTGCCTTTTTCAAAGCGTTCCTGCCTCCTCCCTGAGCTTGTGCCTTGTTCTTTGTATATCTaGTGCCGTCTGTTCCAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: GSRLPFSKRSCLLPELVPCSLYI*CRLFQR Trigger: CCGCTGGAACAGACGGCACAAGATATACAAAGAACA...AGGCACAAGCTCAGGGAGGAGGCAGGAACGCTTTGAAAAAGGCAAACGGGATCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
||
| CDS TCA 90 bp | GTCGGTCCATATTTCCAATCAGGAAGTCAAAGACGGCCATGTCAATaGTGCCGAGGAGTCTGTTGCTGCTGTTGTACGGGTAGATCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: VGPYFQSGSQRRPCQ*CRGVCCCCCTGRSA Trigger: AGCAGATCTACCCGTACAACAGCAGCAACAGACTCCTCGGCATCATTGACATGGCCGTCTTTGACTTCCTGATTGGAAATATGGACCGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
||
| CDS-3UTR CAA 90 bp | GCTCAGAAGATAATCTGCAGTCCTGATGGAGCCAGAGCTCGTTGGGAAGAGAGAACCTCTAGGATTTCCTaGGTGACATTCACTAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: AQKIICSPDGARARWEERTSRIS*VTFTSL Trigger: GAGGCTAGTGAATGTCACCAAGGAAATCCTAGAGGT...TCTCTCTTCCCAACGAGCTCTGGCTCCATCAGGACTGCAGATTATCTTCTGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
||
| CDS-3UTR CAA 90 bp | GCTTCCAAACCTTCCAAGCCTGGTCCAGATCCAGGTTTCACAGTGTGCTCAGAAACCTCTAGGATTTCCTaGGTGACATTCACTAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: ASKPSKPGPDPGFTVCSETSRIS*VTFTSL Trigger: GAGGCTAGTGAATGTCACCAAGGAAATCCTAGAGGT...TTCTGAGCACACTGTGAAACCTGGATCTGGACCAGGCTTGGAAGGTTTGGAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
||
| CDS-3UTR CAA 90 bp | GCTCAGAAGATAATCTGCAGTCCTGATGGAGCCAGAGCTCGTTGGGAAGAGAGATGTAGGATCTCGTTCTaGGTGACCTCTAGGATTTCC | + |
|
Preference number: 5 (lower is better) Translates to: AQKIICSPDGARARWEERCRISF*VTSRIS Trigger: GGAAATCCTAGAGGTCACCAAGAACGAGATCCTACA...TCTCTCTTCCCAACGAGCTCTGGCTCCATCAGGACTGCAGATTATCTTCTGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
||
| CDS-3UTR CAA 90 bp | GAAGTCCCTTCCTCTCACCAGCTGCATGTCCTTCTTTTAAAACTTGGCCCAGGATGTAGGATCTCGTTCTaGGTGACCTCTAGGATTTCC | + |
|
Preference number: 5 (lower is better) Translates to: EVPSSHQLHVLLLKLGPGCRISF*VTSRIS Trigger: GGAAATCCTAGAGGTCACCAAGAACGAGATCCTACA...TCCTGGGCCAAGTTTTAAAAGAAGGACATGCAGCTGGTGAGAGGAAGGGACTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155559.8 |
||
| CDS-3UTR CAA 90 bp | CAGAAGATAATCTGCAGTCCTGATGGAGCCAGAGCTCGTTGGGAAGAGAGAGCCAAGAGTGTTTTCCTTTaGATCATGCAACACTGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: QKIICSPDGARARWEERAKSVFL*IMQHCA Trigger: AGCGCAGTGTTGCATGATCAAAAGGAAAACACTCTT...GGCTCTCTCTTCCCAACGAGCTCTGGCTCCATCAGGACTGCAGATTATCTTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
||
| CDS-3UTR CAA 90 bp | GCTCAGAAGATAATCTGCAGTCCTGATGGAGCCAGAGCTCGTTGGGAAGAGAGAGGAGGTAAGGTTGAATaGTTCTTTGTATATCTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: AQKIICSPDGARARWEERGGKVE*FFVYLV Trigger: CACAAGATATACAAAGAACAATTCAACCTTACCTCC...TCTCTCTTCCCAACGAGCTCTGGCTCCATCAGGACTGCAGATTATCTTCTGAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
||
| CDS-3UTR CAA 90 bp | CCAAACCTTCCAAGCCTGGTCCAGATCCAGGTTTCACAGTGTGCTCAGAAGATATCCAAGGAGGTAAGGTaGAATTGTTCTTTGTATATC | + |
|
Preference number: 5 (lower is better) Translates to: PNLPSLVQIQVSQCAQKISKEVR*NCSLYI Trigger: GATATACAAAGAACAATTCAACCTTACCTCCTTGGA...TATCTTCTGAGCACACTGTGAAACCTGGATCTGGACCAGGCTTGGAAGGTTTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
||
| CDS-3UTR CAA 90 bp | GTCCAGATCCAGGTTTCACAGTGTGCTCAGAAGATAATCTGCAGTCCTGATGGAGGAGGTAAGGTTGAATaGTTCTTTGTATATCTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: VQIQVSQCAQKIICSPDGGGKVE*FFVYLV Trigger: CACAAGATATACAAAGAACAATTCAACCTTACCTCC...TCCATCAGGACTGCAGATTATCTTCTGAGCACACTGTGAAACCTGGATCTGGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
||
| CDS CCA 72 bp | GCGAAGAGGGCCTGCAGCTTAGAGCGCGGGGCAGGGTaGCCGCGGCTGGGATGCTCAACCCGGGGCAAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: AKRACSLERGAG*PRLGCSTRGKA Trigger: AGCTTTGCCCCGGGTTGAGCATCCCAGCCGCGGCCACCCTGCCCCGCGCTCTAAGCTGCAGGCCCTCTTCGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
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| CDS CAA 90 bp | CAGGAGCCAGTCTTCGGGTCCCAGGAGAGGCGGATCCTCCAGGACTaGGTAGAGCGAGTGGGCGAAGAGGGCCTGCAGCTTAGAGCGCGG | + |
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Preference number: 6 (lower is better) Translates to: QEPVFGSQERRILQD*VERVGEEGLQLRAR Trigger: CCGCGCTCTAAGCTGCAGGCCCTCTTCGCCCACTCGCTCTACCAAGTCCTGGAGGATCCGCCTCTCCTGGGACCCGAAGACTGGCTCCTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
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| CDS TCA 72 bp | CGTGGGCCTCTATGCAGTCCTCCACGGTCTTCAGGATaGTCTGGAGTCTGCGGTCCAGGGCCAGGAGGTGGG | + |
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Preference number: 6 (lower is better) Translates to: RGPLCSPPRSSG*SGVCGPGPGGG Trigger: CCCACCTCCTGGCCCTGGACCGCAGACTCCAGATCATCCTGAAGACCGTGGAGGACTGCATAGAGGCCCACG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
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| CDS GCA 72 bp | CCCGGGGCAAAGCTCCTGAAAAGTTGTGCGAGGCTGTaGCAAGGTCTCGGGAGGCTGCGGCTGAGTGTAGAG | + |
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Preference number: 6 (lower is better) Translates to: PGAKLLKSCARL*QGLGRLRLSVE Trigger: CTCTACACTCAGCCGCAGCCTCCCGAGACCTTGGCACAGCCTCGCACAACTTTTCAGGAGCTTTGCCCCGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
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| CDS GCA 72 bp | GGATGCTCAACCCGGGGCAAAGCTCCTGAAAAGTTGTaGGAGGCTGTGCCAAGGTCTCGGGAGGCTGCGGCT | + |
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Preference number: 6 (lower is better) Translates to: GCSTRGKAPEKL*EAVPRSREAAA Trigger: AGCCGCAGCCTCCCGAGACCTTGGCACAGCCTCGCACAACTTTTCAGGAGCTTTGCCCCGGGTTGAGCATCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
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| CDS CCA 72 bp | GAGTACAGCCCGTGGCTGTTGATCCCCAAGTGGAACTaGACCCAGCTGGCCTCTGGTCGAAACTGGAGCGGG | + |
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Preference number: 6 (lower is better) Translates to: EYSPWLLIPKWN*TQLASGRNWSG Trigger: CCCGCTCCAGTTTCGACCAGAGGCCAGCTGGGTCCAGTTCCACTTGGGGATCAACAGCCACGGGCTGTACTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
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| CDS CCA 72 bp | GCCAGGAGGTGGGGTTCTGTGAGGACAGGGCTGAGCTaGTCTTCTAGAAGTGACTCCCGCATCACGTCGCTG | + |
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Preference number: 6 (lower is better) Translates to: ARRWGSVRTGLS*SSRSDSRITSL Trigger: CAGCGACGTGATGCGGGAGTCACTTCTAGAAGACCAGCTCAGCCCTGTCCTCACAGAACCCCACCTCCTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
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| CDS CCA 72 bp | GCCTCTATGCAGTCCTCCACGGTCTTCAGGATGATCTaGAGTCTGCGGTCCAGGGCCAGGAGGTGGGGTTCT | + |
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Preference number: 6 (lower is better) Translates to: ASMQSSTVFRMI*SLRSRARRWGS Trigger: AGAACCCCACCTCCTGGCCCTGGACCGCAGACTCCAGATCATCCTGAAGACCGTGGAGGACTGCATAGAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
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| CDS CAA 90 bp | AGGGATGGCAGGAAGGCGGAGAGGGAGCCTTCCAGCAGGTGTGGGTaGCCACAGACAGCGTACTCGGTCTTGCACATGTACGGACACTTG | + |
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Preference number: 6 (lower is better) Translates to: RDGRKAEREPSSRCG*PQTAYSVLHMYGHL Trigger: CAAGTGTCCGTACATGTGCAAGACCGAGTACGCTGTCTGTGGCAACCCACACCTGCTGGAAGGCTCCCTCTCCGCCTTCCTGCCATCCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
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| CDS TCA 72 bp | TGGTGGGGAAGTGTCTCATGTCATGGAGGAGCTTGCTaGTGGCAAGGCTGGACCTGGAGTACAGCCCGTGGC | + |
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Preference number: 6 (lower is better) Translates to: WWGSVSCHGGAC*WQGWTWSTARG Trigger: GCCACGGGCTGTACTCCAGGTCCAGCCTTGCCATCAGCAAGCTCCTCCATGACATGAGACACTTCCCCACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
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| CDS CCA 72 bp | GTTGATCCCCAAGTGGAACTGGACCCAGCTGGCCTCTaGTCGAAACTGGAGCGGGGGATCCAAGGAGGTAAG | + |
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Preference number: 6 (lower is better) Translates to: VDPQVELDPAGL*SKLERGIQGGK Trigger: CTTACCTCCTTGGATCCCCCGCTCCAGTTTCGACCAGAGGCCAGCTGGGTCCAGTTCCACTTGGGGATCAAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
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| CDS TCA 72 bp | GCTGGTCTTCTAGAAGTGACTCCCGCATCACGTCGCTaGGCCTGTAGTCAGCCTGAGCCAGCAGCTGAAGGT | + |
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Preference number: 6 (lower is better) Translates to: AGLLEVTPASRR*ACSQPEPAAEG Trigger: ACCTTCAGCTGCTGGCTCAGGCTGACTACAGGCTCAGCGACGTGATGCGGGAGTCACTTCTAGAAGACCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
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| CDS GCA 72 bp | GCAGGTGTGGGTTGCCACAGACAGCGTACTCGGTCTTaGACATGTACGGACACTTGGCGAAGAAGCACACGT | + |
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Preference number: 6 (lower is better) Translates to: AGVGCHRQRTRS*TCTDTWRRSTR Trigger: ACGTGTGCTTCTTCGCCAAGTGTCCGTACATGTGCAAGACCGAGTACGCTGTCTGTGGCAACCCACACCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
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| CDS CAA 72 bp | AGCAGGTGTGGGTTGCCACAGACAGCGTACTCGGTCTaGCACATGTACGGACACTTGGCGAAGAAGCACACG | + |
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Preference number: 6 (lower is better) Translates to: SRCGLPQTAYSV*HMYGHLAKKHT Trigger: CGTGTGCTTCTTCGCCAAGTGTCCGTACATGTGCAAGACCGAGTACGCTGTCTGTGGCAACCCACACCTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
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| CDS CAA 90 bp | GAGCCTTCCAGCAGGTGTGGGTTGCCACAGACAGCGTACTCGGTCTaGCACATGTACGGACACTTGGCGAAGAAGCACACGTTGTTAGCT | + |
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Preference number: 6 (lower is better) Translates to: EPSSRCGLPQTAYSV*HMYGHLAKKHTLLA Trigger: AGCTAACAACGTGTGCTTCTTCGCCAAGTGTCCGTACATGTGCAAGACCGAGTACGCTGTCTGTGGCAACCCACACCTGCTGGAAGGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
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| CDS TCA 72 bp | CAGGCGTCTCCTCCTCTCGCTGCTGTCTCATGGGTTTaGACATGGCTTTCCCGAAGTCCGAGAACCTCAGAA | + |
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Preference number: 6 (lower is better) Translates to: QASPPLAAVSWV*TWLSRSPRTSE Trigger: TTCTGAGGTTCTCGGACTTCGGGAAAGCCATGTTCAAACCCATGAGACAGCAGCGAGAGGAGGAGACGCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
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| CDS CAA 72 bp | TCAGGCGTCTCCTCCTCTCGCTGCTGTCTCATGGGTTaGAACATGGCTTTCCCGAAGTCCGAGAACCTCAGA | + |
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Preference number: 6 (lower is better) Translates to: SGVSSSRCCLMG*NMAFPKSENLR Trigger: TCTGAGGTTCTCGGACTTCGGGAAAGCCATGTTCAAACCCATGAGACAGCAGCGAGAGGAGGAGACGCCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
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| CDS CCA 72 bp | CCGAGAACCTCAGAACCAATTTCAGGTGGACCCCACTaGGTTTCACAATCTGTGAGCAGTCACAGGCCCCTA | + |
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Preference number: 6 (lower is better) Translates to: PRTSEPISGGPH*VSQSVSSHRPL Trigger: TAGGGGCCTGTGACTGCTCACAGATTGTGAAACCCAGTGGGGTCCACCTGAAATTGGTTCTGAGGTTCTCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
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| CDS CCA 72 bp | CACTGCGCTAGAGGGGCGAGGATAGAGATTTCATCCTaGGAATGTCGTCCGAACCCTCTGGCATTGTCAAGA | + |
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Preference number: 6 (lower is better) Translates to: HCARGARIEISS*ECRPNPLALSR Trigger: TCTTGACAATGCCAGAGGGTTCGGACGACATTCCCAGGATGAAATCTCTATCCTCGCCCCTCTAGCGCAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
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| CDS CAA 72 bp | AGCGGGGGATCCAAGGAGGTAAGGTTGAATTGTTCTTaGTATATCTTGTGCCGTCTGTTCCAGCGGGCCACC | + |
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Preference number: 6 (lower is better) Translates to: SGGSKEVRLNCS*YILCRLFQRAT Trigger: GGTGGCCCGCTGGAACAGACGGCACAAGATATACAAAGAACAATTCAACCTTACCTCCTTGGATCCCCCGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
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| CDS CAA 72 bp | CAGACAGCGTACTCGGTCTTGCACATGTACGGACACTaGGCGAAGAAGCACACGTTGTTAGCTGGAGACACA | + |
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Preference number: 6 (lower is better) Translates to: QTAYSVLHMYGH*AKKHTLLAGDT Trigger: TGTGTCTCCAGCTAACAACGTGTGCTTCTTCGCCAAGTGTCCGTACATGTGCAAGACCGAGTACGCTGTCTG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
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| CDS CAA 90 bp | CTCTGGTCGAAACTGGAGCGGGGGATCCAAGGAGGTAAGGTTGAATaGTTCTTTGTATATCTTGTGCCGTCTGTTCCAGCGGGCCACCTT | + |
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Preference number: 6 (lower is better) Translates to: LWSKLERGIQGGKVE*FFVYLVPSVPAGHL Trigger: AAGGTGGCCCGCTGGAACAGACGGCACAAGATATACAAAGAACAATTCAACCTTACCTCCTTGGATCCCCCGCTCCAGTTTCGACCAGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
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| CDS CAA 90 bp | AACACACTCTGTAGGATCTCGTTCTTGGTGACCTCTAGGATTTCCTaGGTGACATTCACTAGCCTCCCTACTGTTGGCGGTACCCGTCGG | + |
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Preference number: 6 (lower is better) Translates to: NTLCRISFLVTSRIS*VTFTSLPTVGGTRR Trigger: CCGACGGGTACCGCCAACAGTAGGGAGGCTAGTGAATGTCACCAAGGAAATCCTAGAGGTCACCAAGAACGAGATCCTACAGAGTGTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
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| CDS CAA 90 bp | GGGTTGCCACAGACAGCGTACTCGGTCTTGCACATGTACGGACACTaGGCGAAGAAGCACACGTTGTTAGCTGGAGACACAAAGAACACA | + |
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Preference number: 6 (lower is better) Translates to: GLPQTAYSVLHMYGH*AKKHTLLAGDTKNT Trigger: TGTGTTCTTTGTGTCTCCAGCTAACAACGTGTGCTTCTTCGCCAAGTGTCCGTACATGTGCAAGACCGAGTACGCTGTCTGTGGCAACCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
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| CDS CCA 72 bp | TTCCCGAAGTCCGAGAACCTCAGAACCAATTTCAGGTaGACCCCACTGGGTTTCACAATCTGTGAGCAGTCA | + |
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Preference number: 6 (lower is better) Translates to: FPKSENLRTNFR*TPLGFTICEQS Trigger: TGACTGCTCACAGATTGTGAAACCCAGTGGGGTCCACCTGAAATTGGTTCTGAGGTTCTCGGACTTCGGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
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| CDS TCA 72 bp | CTAGCAAGGCTTTTTCATCCTGGCTGTAATCAGCACTaGTGGTGGGGAAGTGTCTCATGTCATGGAGGAGCT | + |
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Preference number: 6 (lower is better) Translates to: LARLFHPGCNQH*WWGSVSCHGGA Trigger: AGCTCCTCCATGACATGAGACACTTCCCCACCATCAGTGCTGATTACAGCCAGGATGAAAAAGCCTTGCTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
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| CDS CAA 72 bp | TGTAGGATCTCGTTCTTGGTGACCTCTAGGATTTCCTaGGTGACATTCACTAGCCTCCCTACTGTTGGCGGT | + |
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Preference number: 6 (lower is better) Translates to: CRISFLVTSRIS*VTFTSLPTVGG Trigger: ACCGCCAACAGTAGGGAGGCTAGTGAATGTCACCAAGGAAATCCTAGAGGTCACCAAGAACGAGATCCTACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
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| CDS CAA 90 bp | TACTCGGTCTTGCACATGTACGGACACTTGGCGAAGAAGCACACGTaGTTAGCTGGAGACACAAAGAACACACTCTGTAGGATCTCGTTC | + |
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Preference number: 6 (lower is better) Translates to: YSVLHMYGHLAKKHT*LAGDTKNTLCRISF Trigger: GAACGAGATCCTACAGAGTGTGTTCTTTGTGTCTCCAGCTAACAACGTGTGCTTCTTCGCCAAGTGTCCGTACATGTGCAAGACCGAGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
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| CDS TCA 72 bp | TATTTCCAATCAGGAAGTCAAAGACGGCCATGTCAATaGTGCCGAGGAGTCTGTTGCTGCTGTTGTACGGGT | + |
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Preference number: 6 (lower is better) Translates to: YFQSGSQRRPCQ*CRGVCCCCCTG Trigger: ACCCGTACAACAGCAGCAACAGACTCCTCGGCATCATTGACATGGCCGTCTTTGACTTCCTGATTGGAAATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
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| CDS CAA 72 bp | AAACTGGAGCGGGGGATCCAAGGAGGTAAGGTTGAATaGTTCTTTGTATATCTTGTGCCGTCTGTTCCAGCG | + |
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Preference number: 6 (lower is better) Translates to: KLERGIQGGKVE*FFVYLVPSVPA Trigger: CGCTGGAACAGACGGCACAAGATATACAAAGAACAATTCAACCTTACCTCCTTGGATCCCCCGCTCCAGTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
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| CDS CAA 72 bp | TTGCACATGTACGGACACTTGGCGAAGAAGCACACGTaGTTAGCTGGAGACACAAAGAACACACTCTGTAGG | + |
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Preference number: 6 (lower is better) Translates to: LHMYGHLAKKHT*LAGDTKNTLCR Trigger: CCTACAGAGTGTGTTCTTTGTGTCTCCAGCTAACAACGTGTGCTTCTTCGCCAAGTGTCCGTACATGTGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
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| CDS CAA 90 bp | TTGTTAGCTGGAGACACAAAGAACACACTCTGTAGGATCTCGTTCTaGGTGACCTCTAGGATTTCCTTGGTGACATTCACTAGCCTCCCT | + |
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Preference number: 6 (lower is better) Translates to: LLAGDTKNTLCRISF*VTSRISLVTFTSLP Trigger: AGGGAGGCTAGTGAATGTCACCAAGGAAATCCTAGAGGTCACCAAGAACGAGATCCTACAGAGTGTGTTCTTTGTGTCTCCAGCTAACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020938.8 ENSMUST00000155559.8 |
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