Pregenerated sensors for FAM207A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032977Ensembl transcript IDs: ENSMUST00000045454.9, ENSMUST00000218414.2
Found 75 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTCTTTCTTGCCACCCAACCAAGAGGCTCCTGGGCTGGGCTGTTCTaGCTCCAGGCGGGACCATCTGCTTCTCTGGTCACAGCAGGGCAG | + |
|
Preference number: 1 (lower is better) Translates to: VFLATQPRGSWAGLF*LQAGPSASLVTAGQ Trigger: CTGCCCTGCTGTGACCAGAGAAGCAGATGGTCCCGCCTGGAGGCAGAACAGCCCAGCCCAGGAGCCTCTTGGTTGGGTGGCAAGAAAGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045454.9 |
||
| 3UTR GCA 90 bp | TGCCCTGGGTGTCCATACAGGCCTAGGGGGCTCACCTGTTCTGCCTaGTCTCCACTCACAGGGCCAAGGAGCCATGAGTATGTGGACCAC | + |
|
Preference number: 1 (lower is better) Translates to: CPGCPYRPRGLTCSA*SPLTGPRSHEYVDH Trigger: GTGGTCCACATACTCATGGCTCCTTGGCCCTGTGAGTGGAGAGCAGGCAGAACAGGTGAGCCCCCTAGGCCTGTATGGACACCCAGGGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045454.9 |
||
| 3UTR CCA 90 bp | AGCTGCGGCTTGGCTGAAGGCAAACAGTTCGAGAAACAAGGTGGCTaGCAGAGGGCCCTGCTGGGACCAGGATCCCAAACAGCTGGGAAG | + |
|
Preference number: 1 (lower is better) Translates to: SCGLAEGKQFEKQGG*QRALLGPGSQTAGK Trigger: CTTCCCAGCTGTTTGGGATCCTGGTCCCAGCAGGGCCCTCTGCCAGCCACCTTGTTTCTCGAACTGTTTGCCTTCAGCCAAGCCGCAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045454.9 |
||
| 3UTR TCA 90 bp | TCTCTGGTCACAGCAGGGCAGGGAAAGGCAGTGAGTAACCTGGGCTaGGAGAGGTCAGAGCCACAAGAAGCTGCGGCTTGGCTGAAGGCA | + |
|
Preference number: 1 (lower is better) Translates to: SLVTAGQGKAVSNLG*ERSEPQEAAAWLKA Trigger: TGCCTTCAGCCAAGCCGCAGCTTCTTGTGGCTCTGACCTCTCTCAGCCCAGGTTACTCACTGCCTTTCCCTGCCCTGCTGTGACCAGAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045454.9 |
||
| 3UTR TCA 90 bp | GTAAAAGGCTTGGGAGCACTGTCAGAGGGTAAGGGGGTGGGAGGGTaGGTAGTGCCACAGGCACGCCCAGATATAAGGTGGAGCATGGGT | + |
|
Preference number: 1 (lower is better) Translates to: VKGLGALSEGKGVGG*VVPQARPDIRWSMG Trigger: ACCCATGCTCCACCTTATATCTGGGCGTGCCTGTGGCACTACTCACCCTCCCACCCCCTTACCCTCTGACAGTGCTCCCAAGCCTTTTAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045454.9 |
||
| 3UTR GCA 90 bp | ACAGATTCTGAGGTAGTCCCAGTGATGTCTGCTTGGCTCCTCTCCTaGTCACTGCACGTTAGTGTCCTCGGTTGGTGTGACCCCCTGACC | + |
|
Preference number: 1 (lower is better) Translates to: TDSEVVPVMSAWLLS*SLHVSVLGWCDPLT Trigger: GGTCAGGGGGTCACACCAACCGAGGACACTAACGTGCAGTGAGCAGGAGAGGAGCCAAGCAGACATCACTGGGACTACCTCAGAATCTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045454.9 |
||
| 3UTR GCA 90 bp | GGGTGCTACTCTGAGAACTCACTAGTGTCTAACACAGGTCTTTCTTaGCACCCAACCAAGAGGCTCCTGGGCTGGGCTGTTCTGCCTCCA | + |
|
Preference number: 1 (lower is better) Translates to: GCYSENSLVSNTGLS*HPTKRLLGWAVLPP Trigger: TGGAGGCAGAACAGCCCAGCCCAGGAGCCTCTTGGTTGGGTGGCAAGAAAGACCTGTGTTAGACACTAGTGAGTTCTCAGAGTAGCACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045454.9 |
||
| 3UTR GCA 90 bp | ACCCAGTTTAGGCCTATTCAGTCTTACCCACTTCCATTCACCAAGTaGCCTGGGTGTCCATACAGGCCTAGGGGGCTCACCTGTTCTGCC | + |
|
Preference number: 1 (lower is better) Translates to: TQFRPIQSYPLPFTK*PGCPYRPRGLTCSA Trigger: GGCAGAACAGGTGAGCCCCCTAGGCCTGTATGGACACCCAGGGCACTTGGTGAATGGAAGTGGGTAAGACTGAATAGGCCTAAACTGGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045454.9 |
||
| 3UTR GCA 90 bp | CTTGCACCACAGGTAGGTTTAGGCTCTCTTAATGAGAGCCTGTCCTaGCCCCCAAGCAAGGTAGCTGCAGTGTCTCAGCAGTCTGCTGAA | + |
|
Preference number: 1 (lower is better) Translates to: LAPQVGLGSLNESLS*PPSKVAAVSQQSAE Trigger: TTCAGCAGACTGCTGAGACACTGCAGCTACCTTGCTTGGGGGGCAGGACAGGCTCTCATTAAGAGAGCCTAAACCTACCTGTGGTGCAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045454.9 |
||
| 3UTR CCA 90 bp | ACCACATTTTGCACAGATTCTGAGGTAGTCCCAGTGATGTCTGCTTaGCTCCTCTCCTGCTCACTGCACGTTAGTGTCCTCGGTTGGTGT | + |
|
Preference number: 1 (lower is better) Translates to: TTFCTDSEVVPVMSA*LLSCSLHVSVLGWC Trigger: ACACCAACCGAGGACACTAACGTGCAGTGAGCAGGAGAGGAGCCAAGCAGACATCACTGGGACTACCTCAGAATCTGTGCAAAATGTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045454.9 |
||
| 3UTR CCA 90 bp | GCTGTCTTGAAGTGGGAAGTAAAGCCACAGATGGTCCTCAGGCTATaGAAGCCACAGTCCCTAAGTCATTTTATTTGTCCTCACCGGCAG | + |
|
Preference number: 1 (lower is better) Translates to: AVLKWEVKPQMVLRL*KPQSLSHFICPHRQ Trigger: CTGCCGGTGAGGACAAATAAAATGACTTAGGGACTGTGGCTTCCATAGCCTGAGGACCATCTGTGGCTTTACTTCCCACTTCAAGACAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045454.9 |
||
| 3UTR-3UTR CCA 90 bp | GAAGGGGCGAGCCCTGCCTGCCCAGTGTCTAGCCTCTGGCCAGCTGTGCAGCTCGAGAAACAAGGTGGCTaGCAGAGGGCCCTGCTGGGA | + |
|
Preference number: 2 (lower is better) Translates to: EGASPACPVSSLWPAVQLEKQGG*QRALLG Trigger: TCCCAGCAGGGCCCTCTGCCAGCCACCTTGTTTCTC...GAGCTGCACAGCTGGCCAGAGGCTAGACACTGGGCAGGCAGGGCTCGCCCCTTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045454.9 |
||
| 3UTR-3UTR TCA 90 bp | CGAGCCCTGCCTGCCCAGTGTCTAGCCTCTGGCCAGCTGTGCAGCTCTGCCAAGCCAGCAGAGGCATACTaGAAAGGTGCTCGCCATGGC | + |
|
Preference number: 2 (lower is better) Translates to: RALPAQCLASGQLCSSAKPAEAY*KGARHG Trigger: GCCATGGCGAGCACCTTTTCAGTATGCCTCTGCTGG...CTTGGCAGAGCTGCACAGCTGGCCAGAGGCTAGACACTGGGCAGGCAGGGCTCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045454.9 |
||
| 3UTR-3UTR TCA 90 bp | GAAGGGGCGAGCCCTGCCTGCCCAGTGTCTAGCCTCTGGCCAGCTGTGCAGCTCCTGACGAAGGGAACTTaGGTCTGTGTCCAGGCCAAT | + |
|
Preference number: 2 (lower is better) Translates to: EGASPACPVSSLWPAVQLLTKGT*VCVQAN Trigger: ATTGGCCTGGACACAGACTCAAGTTCCCTTCGTCAG...GAGCTGCACAGCTGGCCAGAGGCTAGACACTGGGCAGGCAGGGCTCGCCCCTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045454.9 |
||
| 3UTR-3UTR TCA 90 bp | TTTGTCTCAGGTGAGAAGGGGCGAGCCCTGCCTGCCCAGTGTCTAGCCTCTGGCGTGAGTAACCTGGGCTaGGAGAGGTCAGAGCCACAA | + |
|
Preference number: 2 (lower is better) Translates to: FVSGEKGRALPAQCLASGVSNLG*ERSEPQ Trigger: TTGTGGCTCTGACCTCTCTCAGCCCAGGTTACTCAC...GCCAGAGGCTAGACACTGGGCAGGCAGGGCTCGCCCCTTCTCACCTGAGACAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045454.9 |
||
| 3UTR-3UTR GCA 90 bp | CGAGCCCTGCCTGCCCAGTGTCTAGCCTCTGGCCAGCTGTGCAGCTCTGCCAAGAACACAGGTCTTTCTTaGCACCCAACCAAGAGGCTC | + |
|
Preference number: 2 (lower is better) Translates to: RALPAQCLASGQLCSSAKNTGLS*HPTKRL Trigger: GAGCCTCTTGGTTGGGTGGCAAGAAAGACCTGTGTT...CTTGGCAGAGCTGCACAGCTGGCCAGAGGCTAGACACTGGGCAGGCAGGGCTCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045454.9 |
||
| 3UTR-3UTR GCA 90 bp | AACACACGCTTTGTCTCAGGTGAGAAGGGGCGAGCCCTGCCTGCCCAGTGTCTAGGGGCTCACCTGTTCTaGCTGCTCTCCACTCACAGG | + |
|
Preference number: 2 (lower is better) Translates to: NTRFVSGEKGRALPAQCLGAHLF*LLSTHR Trigger: CCTGTGAGTGGAGAGCAGGCAGAACAGGTGAGCCCC...TAGACACTGGGCAGGCAGGGCTCGCCCCTTCTCACCTGAGACAAAGCGTGTGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045454.9 |
||
| 3UTR-3UTR CCA 90 bp | CGAGCCCTGCCTGCCCAGTGTCTAGCCTCTGGCCAGCTGTGCAGCTCTGCCAAGACAACACAAGGAAGGTaGAAACTTCCTAAGCTGTGC | + |
|
Preference number: 2 (lower is better) Translates to: RALPAQCLASGQLCSSAKTTQGR*KLPKLC Trigger: GCACAGCTTAGGAAGTTTCCACCTTCCTTGTGTTGT...CTTGGCAGAGCTGCACAGCTGGCCAGAGGCTAGACACTGGGCAGGCAGGGCTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045454.9 |
||
| 3UTR-3UTR CCA 90 bp | ACCTGTTCTGCCTGCTCTCCACTCACAGGGCCAAGGAGCCATGAGTATGTGGACAGGATCCCAAACAGCTaGGAAGGAGTGCTGAGGCCA | + |
|
Preference number: 2 (lower is better) Translates to: TCSACSPLTGPRSHEYVDRIPNS*EGVLRP Trigger: TGGCCTCAGCACTCCTTCCCAGCTGTTTGGGATCCT...GTCCACATACTCATGGCTCCTTGGCCCTGTGAGTGGAGAGCAGGCAGAACAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045454.9 |
||
| 3UTR-3UTR TCA 90 bp | TTTGTCTCAGGTGAGAAGGGGCGAGCCCTGCCTGCCCAGTGTCTAGCCTCTGGCATTTTGCACAGATTCTaGGGTAGTCCCAGTGATGTC | + |
|
Preference number: 2 (lower is better) Translates to: FVSGEKGRALPAQCLASGILHRF*GSPSDV Trigger: GACATCACTGGGACTACCTCAGAATCTGTGCAAAAT...GCCAGAGGCTAGACACTGGGCAGGCAGGGCTCGCCCCTTCTCACCTGAGACAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045454.9 |
||
| 3UTR-3UTR GCA 90 bp | GCTGTAACTGACCCGTACATGAAGCTGGCCTGTGGAATGCTCTCCCAAGTAGGACACTGGTGCAGCCCTTaGAGATCCCCACAAGAGCAA | + |
|
Preference number: 2 (lower is better) Translates to: AVTDPYMKLACGMLSQVGHWCSP*RSPQEQ Trigger: TTGCTCTTGTGGGGATCTGCAAGGGCTGCACCAGTG...TCCTACTTGGGAGAGCATTCCACAGGCCAGCTTCATGTACGGGTCAGTTACAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045454.9 |
||
| 3UTR-3UTR CCA 90 bp | GTAACTGACCCGTACATGAAGCTGGCCTGTGGAATGCTCTCCCAAGTAGGACCCATGGTCCTCAGGCTATaGAAGCCACAGTCCCTAAGT | + |
|
Preference number: 2 (lower is better) Translates to: VTDPYMKLACGMLSQVGPMVLRL*KPQSLS Trigger: ACTTAGGGACTGTGGCTTCCATAGCCTGAGGACCAT...GGGTCCTACTTGGGAGAGCATTCCACAGGCCAGCTTCATGTACGGGTCAGTTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045454.9 |
||
| 3UTR-3UTR GCA 90 bp | GTAACTGACCCGTACATGAAGCTGGCCTGTGGAATGCTCTCCCAAGTAGGACCCTGGCCAGACCAGAGTTaGTTGAAGCCACATCATAGA | + |
|
Preference number: 2 (lower is better) Translates to: VTDPYMKLACGMLSQVGPWPDQS*LKPHHR Trigger: TCTATGATGTGGCTTCAAGCAACTCTGGTCTGGCCA...GGGTCCTACTTGGGAGAGCATTCCACAGGCCAGCTTCATGTACGGGTCAGTTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045454.9 |
||
| 3UTR-3UTR CCA 90 bp | GCCTGCCTCTGTCTCACCCAGTTTAGGCCTATTCAGTCTTACCCACTTCCATTCCCTCTAGTTTCACACTaGTGCAGCCCTTGCAGATCC | + |
|
Preference number: 2 (lower is better) Translates to: ACLCLTQFRPIQSYPLPFPLVSH*CSPCRS Trigger: GGATCTGCAAGGGCTGCACCAGTGTGAAACTAGAGG...GAATGGAAGTGGGTAAGACTGAATAGGCCTAAACTGGGTGAGACAGAGGCAGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045454.9 |
||
| 3UTR-3UTR CCA 90 bp | GCCTGCCTCTGTCTCACCCAGTTTAGGCCTATTCAGTCTTACCCACTTCCATTCGTGGCTGTCTTGAAGTaGGAAGTAAAGCCACAGATG | + |
|
Preference number: 2 (lower is better) Translates to: ACLCLTQFRPIQSYPLPFVAVLK*EVKPQM Trigger: CATCTGTGGCTTTACTTCCCACTTCAAGACAGCCAC...GAATGGAAGTGGGTAAGACTGAATAGGCCTAAACTGGGTGAGACAGAGGCAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045454.9 |
||
| 3UTR GCA 72 bp | CTGGGCTGGGCTGTTCTGCCTCCAGGCGGGACCATCTaGTTCTCTGGTCACAGCAGGGCAGGGAAAGGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: LGWAVLPPGGTI*FSGHSRAGKGS Trigger: ACTGCCTTTCCCTGCCCTGCTGTGACCAGAGAAGCAGATGGTCCCGCCTGGAGGCAGAACAGCCCAGCCCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045454.9 |
||
| 3UTR GCA 72 bp | GCCACCCAACCAAGAGGCTCCTGGGCTGGGCTGTTCTaGCTCCAGGCGGGACCATCTGCTTCTCTGGTCACA | + |
|
Preference number: 3 (lower is better) Translates to: ATQPRGSWAGLF*LQAGPSASLVT Trigger: TGTGACCAGAGAAGCAGATGGTCCCGCCTGGAGGCAGAACAGCCCAGCCCAGGAGCCTCTTGGTTGGGTGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045454.9 |
||
| 3UTR CCA 72 bp | GAAGGGGCGAGCCCTGCCTGCCCAGTGTCTAGCCTCTaGCCAGCTGTGCAGCTCTGCCAAGCCTTAGACACA | + |
|
Preference number: 3 (lower is better) Translates to: EGASPACPVSSL*PAVQLCQALDT Trigger: TGTGTCTAAGGCTTGGCAGAGCTGCACAGCTGGCCAGAGGCTAGACACTGGGCAGGCAGGGCTCGCCCCTTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045454.9 |
||
| 3UTR-3UTR CAA 90 bp | GGGGCGAGCCCTGCCTGCCCAGTGTCTAGCCTCTGGCCAGCTGTGCAGCTCTGCACCCTTGTAAAAGGCTaGGGAGCACTGTCAGAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: GASPACPVSSLWPAVQLCTLVKG*GALSEG Trigger: ACCCTCTGACAGTGCTCCCAAGCCTTTTACAAGGGT...GCAGAGCTGCACAGCTGGCCAGAGGCTAGACACTGGGCAGGCAGGGCTCGCCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045454.9 |
||
| 3UTR-3UTR CAA 90 bp | CGAGCCCTGCCTGCCCAGTGTCTAGCCTCTGGCCAGCTGTGCAGCTCTGCCAAGCCCAGTGATGTCTGCTaGGCTCCTCTCCTGCTCACT | + |
|
Preference number: 3 (lower is better) Translates to: RALPAQCLASGQLCSSAKPSDVC*APLLLT Trigger: AGTGAGCAGGAGAGGAGCCAAGCAGACATCACTGGG...CTTGGCAGAGCTGCACAGCTGGCCAGAGGCTAGACACTGGGCAGGCAGGGCTCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045454.9 |
||
| 3UTR TCA 72 bp | TTGGGAGCACTGTCAGAGGGTAAGGGGGTGGGAGGGTaGGTAGTGCCACAGGCACGCCCAGATATAAGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: LGALSEGKGVGG*VVPQARPDIRW Trigger: CCACCTTATATCTGGGCGTGCCTGTGGCACTACTCACCCTCCCACCCCCTTACCCTCTGACAGTGCTCCCAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045454.9 |
||
| 3UTR TCA 72 bp | AAGCTGGCCTGTGGAATGCTCTCCCAAGTAGGACCCTaGAGGGTGGGCCTACGTTCCCCAGCAGAGGCATAC | + |
|
Preference number: 3 (lower is better) Translates to: KLACGMLSQVGP*RVGLRSPAEAY Trigger: GTATGCCTCTGCTGGGGAACGTAGGCCCACCCTTCAGGGTCCTACTTGGGAGAGCATTCCACAGGCCAGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045454.9 |
||
| 3UTR-3UTR CAA 90 bp | GCTGCAGTGTCTCAGCAGTCTGCTGAAATGGCCTCTGACGAAGGGAACTTGAGTCTGGGGACCCTGGGCTaGTTCCAGGGTCAGCAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: AAVSQQSAEMASDEGNLSLGTLG*FQGQQG Trigger: ACCCTGCTGACCCTGGAACAAGCCCAGGGTCCCCAG...ACTCAAGTTCCCTTCGTCAGAGGCCATTTCAGCAGACTGCTGAGACACTGCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045454.9 |
||
| 3UTR TCA 72 bp | GTCCTCGGTTGGTGTGACCCCCTGACCTGCTGTAACTaGCCCGTACATGAAGCTGGCCTGTGGAATGCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: VLGWCDPLTCCN*PVHEAGLWNAL Trigger: GAGAGCATTCCACAGGCCAGCTTCATGTACGGGTCAGTTACAGCAGGTCAGGGGGTCACACCAACCGAGGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045454.9 |
||
| 3UTR TCA 72 bp | CACTGCACGTTAGTGTCCTCGGTTGGTGTGACCCCCTaGCCTGCTGTAACTGACCCGTACATGAAGCTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: HCTLVSSVGVTP*PAVTDPYMKLA Trigger: GGCCAGCTTCATGTACGGGTCAGTTACAGCAGGTCAGGGGGTCACACCAACCGAGGACACTAACGTGCAGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045454.9 |
||
| 3UTR GCA 72 bp | TGTCCATACAGGCCTAGGGGGCTCACCTGTTCTGCCTaGTCTCCACTCACAGGGCCAAGGAGCCATGAGTAT | + |
|
Preference number: 3 (lower is better) Translates to: CPYRPRGLTCSA*SPLTGPRSHEY Trigger: ATACTCATGGCTCCTTGGCCCTGTGAGTGGAGAGCAGGCAGAACAGGTGAGCCCCCTAGGCCTGTATGGACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045454.9 |
||
| 3UTR TCA 72 bp | GGCACGCCCAGATATAAGGTGGAGCATGGGTCCATATaGGCTGTGGGGCCTGTGGGTGCTACTCTGAGAACT | + |
|
Preference number: 3 (lower is better) Translates to: GTPRYKVEHGSI*AVGPVGATLRT Trigger: AGTTCTCAGAGTAGCACCCACAGGCCCCACAGCTCATATGGACCCATGCTCCACCTTATATCTGGGCGTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045454.9 |
||
| 3UTR GCA 72 bp | AGGCCTATTCAGTCTTACCCACTTCCATTCACCAAGTaGCCTGGGTGTCCATACAGGCCTAGGGGGCTCACC | + |
|
Preference number: 3 (lower is better) Translates to: RPIQSYPLPFTK*PGCPYRPRGLT Trigger: GGTGAGCCCCCTAGGCCTGTATGGACACCCAGGGCACTTGGTGAATGGAAGTGGGTAAGACTGAATAGGCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045454.9 |
||
| 3UTR GCA 72 bp | GAGGTAGTCCCAGTGATGTCTGCTTGGCTCCTCTCCTaGTCACTGCACGTTAGTGTCCTCGGTTGGTGTGAC | + |
|
Preference number: 3 (lower is better) Translates to: EVVPVMSAWLLS*SLHVSVLGWCD Trigger: GTCACACCAACCGAGGACACTAACGTGCAGTGAGCAGGAGAGGAGCCAAGCAGACATCACTGGGACTACCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045454.9 |
||
| 3UTR TCA 72 bp | GAGAGAGGTCAGAGCCACAAGAAGCTGCGGCTTGGCTaGAGGCAAACAGTTCGAGAAACAAGGTGGCTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: ERGQSHKKLRLG*RQTVRETRWLA Trigger: TGCCAGCCACCTTGTTTCTCGAACTGTTTGCCTTCAGCCAAGCCGCAGCTTCTTGTGGCTCTGACCTCTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045454.9 |
||
| 3UTR GCA 72 bp | CAGGTAGGTTTAGGCTCTCTTAATGAGAGCCTGTCCTaGCCCCCAAGCAAGGTAGCTGCAGTGTCTCAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: QVGLGSLNESLS*PPSKVAAVSQQ Trigger: CTGCTGAGACACTGCAGCTACCTTGCTTGGGGGGCAGGACAGGCTCTCATTAAGAGAGCCTAAACCTACCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045454.9 |
||
| 3UTR CCA 72 bp | GCTTGTTCCAGGGTCAGCAGGGTGGCTGTCTTGAAGTaGGAAGTAAAGCCACAGATGGTCCTCAGGCTATGG | + |
|
Preference number: 3 (lower is better) Translates to: ACSRVSRVAVLK*EVKPQMVLRLW Trigger: CCATAGCCTGAGGACCATCTGTGGCTTTACTTCCCACTTCAAGACAGCCACCCTGCTGACCCTGGAACAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045454.9 |
||
| 3UTR CCA 72 bp | GCTCTCCACTCACAGGGCCAAGGAGCCATGAGTATGTaGACCACCCTTGTAAAAGGCTTGGGAGCACTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: ALHSQGQGAMSM*TTLVKGLGALS Trigger: TGACAGTGCTCCCAAGCCTTTTACAAGGGTGGTCCACATACTCATGGCTCCTTGGCCCTGTGAGTGGAGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045454.9 |
||
| 3UTR CCA 72 bp | TGCACAGATTCTGAGGTAGTCCCAGTGATGTCTGCTTaGCTCCTCTCCTGCTCACTGCACGTTAGTGTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: CTDSEVVPVMSA*LLSCSLHVSVL Trigger: GAGGACACTAACGTGCAGTGAGCAGGAGAGGAGCCAAGCAGACATCACTGGGACTACCTCAGAATCTGTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045454.9 |
||
| 3UTR CCA 72 bp | AGCAAACTCCCACCGACCAGCAGAGGACCACTTTCTTaGGATCTGCTTCCTGTGTCCGTCCACATGAGAACA | + |
|
Preference number: 3 (lower is better) Translates to: SKLPPTSRGPLS*DLLPVSVHMRT Trigger: TGTTCTCATGTGGACGGACACAGGAAGCAGATCCCAAGAAAGTGGTCCTCTGCTGGTCGGTGGGAGTTTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045454.9 |
||
| 3UTR GCA 72 bp | TCTGAGAACTCACTAGTGTCTAACACAGGTCTTTCTTaGCACCCAACCAAGAGGCTCCTGGGCTGGGCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: SENSLVSNTGLS*HPTKRLLGWAV Trigger: AACAGCCCAGCCCAGGAGCCTCTTGGTTGGGTGGCAAGAAAGACCTGTGTTAGACACTAGTGAGTTCTCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045454.9 |
||
| 3UTR CCA 72 bp | AAGTGGGAAGTAAAGCCACAGATGGTCCTCAGGCTATaGAAGCCACAGTCCCTAAGTCATTTTATTTGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: KWEVKPQMVLRL*KPQSLSHFICP Trigger: AGGACAAATAAAATGACTTAGGGACTGTGGCTTCCATAGCCTGAGGACCATCTGTGGCTTTACTTCCCACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045454.9 |
||
| 3UTR GCA 72 bp | ATACTGAAAAGGTGCTCGCCATGGCCAGACCAGAGTTaGTTGAAGCCACATCATAGAAATCTTAATACACAC | + |
|
Preference number: 3 (lower is better) Translates to: ILKRCSPWPDQS*LKPHHRNLNTH Trigger: GTGTGTATTAAGATTTCTATGATGTGGCTTCAAGCAACTCTGGTCTGGCCATGGCGAGCACCTTTTCAGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045454.9 |
||
| CDS-3UTR CCA 90 bp | GAAGGGGCGAGCCCTGCCTGCCCAGTGTCTAGCCTCTGGCCAGCTGTGCAGCTCTCGGCTGAGCTCCACTaGCCGGGGCTTGCTGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: EGASPACPVSSLWPAVQLSAELH*PGLAGH Trigger: GTGACCAGCAAGCCCCGGCCAGTGGAGCTCAGCCGA...GAGCTGCACAGCTGGCCAGAGGCTAGACACTGGGCAGGCAGGGCTCGCCCCTTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045454.9 |
||
| CDS-3UTR CCA 90 bp | GGGGCGAGCCCTGCCTGCCCAGTGTCTAGCCTCTGGCCAGCTGTGCAGCTCTGCCGCCTACCACCACCATaGCCTTGCGCTTTCGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GASPACPVSSLWPAVQLCRLPPP*PCAFVP Trigger: AGGAACGAAAGCGCAAGGCCATGGTGGTGGTAGGCG...GCAGAGCTGCACAGCTGGCCAGAGGCTAGACACTGGGCAGGCAGGGCTCGCCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045454.9 |
||
| CDS-3UTR GCA 90 bp | GAAGGGGCGAGCCCTGCCTGCCCAGTGTCTAGCCTCTGGCCAGCTGTGCAGCTCTTGCCACCTTCCAGCTaGATCTGGTGTGCCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: EGASPACPVSSLWPAVQLLPPSS*IWCASC Trigger: GCAGCTGGCACACCAGATGCAGCTGGAAGGTGGCAA...GAGCTGCACAGCTGGCCAGAGGCTAGACACTGGGCAGGCAGGGCTCGCCCCTTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045454.9 |
||
| CDS-3UTR GCA 90 bp | TTTGTCTCAGGTGAGAAGGGGCGAGCCCTGCCTGCCCAGTGTCTAGCCTCTGGCGCTTGCTGGTCACCCTaGGTCTGGCTTGCTGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: FVSGEKGRALPAQCLASGACWSP*VWLAAA Trigger: AGCGGCAGCAAGCCAGACGCAGGGTGACCAGCAAGC...GCCAGAGGCTAGACACTGGGCAGGCAGGGCTCGCCCCTTCTCACCTGAGACAAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045454.9 |
||
| CDS-3UTR CCA 90 bp | GGAAGGAGTGCTGAGGCCAGAGGGACCGAGCGACTTAGCAGGCCTCTAGTTTCACCAGCTGCTGCCCGATaGCCAGCAGGGGACTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GRSAEARGTERLSRPLVSPAAAR*PAGDWL Trigger: GAGCCAGTCCCCTGCTGGCCATCGGGCAGCAGCTGG...TGAAACTAGAGGCCTGCTAAGTCGCTCGGTCCCTCTGGCCTCAGCACTCCTTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045454.9 |
||
| CDS-3UTR TCA 90 bp | TTTGTCTCAGGTGAGAAGGGGCGAGCCCTGCCTGCCCAGTGTCTAGCCTCTGGCGCTTTCGTTCCTCCCTaGGCTTCTGCTCTGCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: FVSGEKGRALPAQCLASGAFVPP*ASALPA Trigger: AGCTGGCAGAGCAGAAGCTCAGGGAGGAACGAAAGC...GCCAGAGGCTAGACACTGGGCAGGCAGGGCTCGCCCCTTCTCACCTGAGACAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045454.9 |
||
| CDS-3UTR CCA 90 bp | CTGGGTGTCCATACAGGCCTAGGGGGCTCACCTGTTCTGCCTGCTCTCCACTCAGACACCACACTCCTCTaGTCCAGCTCCAGCCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LGVHTGLGGSPVLPALHSDTTLL*SSSSLC Trigger: GCAGAGGCTGGAGCTGGACCAGAGGAGTGTGGTGTC...TGAGTGGAGAGCAGGCAGAACAGGTGAGCCCCCTAGGCCTGTATGGACACCCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045454.9 |
||
| CDS-3UTR CCA 90 bp | ACCTGTTCTGCCTGCTCTCCACTCACAGGGCCAAGGAGCCATGAGTATGTGGACCTGGCCGGGGCTTGCTaGTCACCCTGCGTCTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: TCSACSPLTGPRSHEYVDLAGAC*SPCVWL Trigger: AAGCCAGACGCAGGGTGACCAGCAAGCCCCGGCCAG...GTCCACATACTCATGGCTCCTTGGCCCTGTGAGTGGAGAGCAGGCAGAACAGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045454.9 |
||
| 3UTR CAA 72 bp | CTGCTTCCTGTGTCCGTCCACATGAGAACACACGCTTaGTCTCAGGTGAGAAGGGGCGAGCCCTGCCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LLPVSVHMRTHA*SQVRRGEPCLP Trigger: GGGCAGGCAGGGCTCGCCCCTTCTCACCTGAGACAAAGCGTGTGTTCTCATGTGGACGGACACAGGAAGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045454.9 |
||
| CDS-3UTR GCA 90 bp | GTAACTGACCCGTACATGAAGCTGGCCTGTGGAATGCTCTCCCAAGTAGGACCCCAGCTGCATCTGGTGTaGCAGCTGCTGCCCGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: VTDPYMKLACGMLSQVGPQLHLV*QLLPDG Trigger: GCCATCGGGCAGCAGCTGGCACACCAGATGCAGCTG...GGGTCCTACTTGGGAGAGCATTCCACAGGCCAGCTTCATGTACGGGTCAGTTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045454.9 |
||
| CDS-3UTR GCA 90 bp | CTGGGTGTCCATACAGGCCTAGGGGGCTCACCTGTTCTGCCTGCTCTCCACTCATCCTCCCTGAGCTTCTaGTCTGCCAGCTTTATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LGVHTGLGGSPVLPALHSSSLSF*SASFMA Trigger: AGCCATAAAGCTGGCAGAGCAGAAGCTCAGGGAGGA...TGAGTGGAGAGCAGGCAGAACAGGTGAGCCCCCTAGGCCTGTATGGACACCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045454.9 |
||
| CDS-3UTR CCA 90 bp | AACACACGCTTTGTCTCAGGTGAGAAGGGGCGAGCCCTGCCTGCCCAGTGTCTACTCTGTAGGTTGGGCTaGCCAGCAGCTTCTGAAACC | + |
|
Preference number: 4 (lower is better) Translates to: NTRFVSGEKGRALPAQCLLCRLG*PAASET Trigger: GGTTTCAGAAGCTGCTGGCCAGCCCAACCTACAGAG...TAGACACTGGGCAGGCAGGGCTCGCCCCTTCTCACCTGAGACAAAGCGTGTGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045454.9 |
||
| CDS-3UTR CCA 90 bp | GCTGCAGTGTCTCAGCAGTCTGCTGAAATGGCCTCTGACGAAGGGAACTTGAGTTGGCCAGCAGGGGACTaGCTCTGTAGGTTGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: AAVSQQSAEMASDEGNLSWPAGD*LCRLGW Trigger: CCAGCCCAACCTACAGAGCCAGTCCCCTGCTGGCCA...ACTCAAGTTCCCTTCGTCAGAGGCCATTTCAGCAGACTGCTGAGACACTGCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045454.9 |
||
| 3UTR CAA 72 bp | CCCTGGGCTTGTTCCAGGGTCAGCAGGGTGGCTGTCTaGAAGTGGGAAGTAAAGCCACAGATGGTCCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PWACSRVSRVAV*KWEVKPQMVLR Trigger: CCTGAGGACCATCTGTGGCTTTACTTCCCACTTCAAGACAGCCACCCTGCTGACCCTGGAACAAGCCCAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045454.9 |
||
| CDS-3UTR GCA 90 bp | GCCTGCCTCTGTCTCACCCAGTTTAGGCCTATTCAGTCTTACCCACTTCCATTCATCTGGTGTGCCAGCTaGTGCCCGATGGCCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ACLCLTQFRPIQSYPLPFIWCAS*CPMASR Trigger: CCTGCTGGCCATCGGGCAGCAGCTGGCACACCAGAT...GAATGGAAGTGGGTAAGACTGAATAGGCCTAAACTGGGTGAGACAGAGGCAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045454.9 |
||
| CDS-3UTR CCA 90 bp | CGAGCCCTGCCTGCCCAGTGTCTAGCCTCTGGCCAGCTGTGCAGCTCTGCCAAGGCTCTGCCAGCTTTATaGCTTCAATTTTCTGTAACC | + |
|
Preference number: 4 (lower is better) Translates to: RALPAQCLASGQLCSSAKALPAL*LQFSVT Trigger: GGTTACAGAAAATTGAAGCCATAAAGCTGGCAGAGC...CTTGGCAGAGCTGCACAGCTGGCCAGAGGCTAGACACTGGGCAGGCAGGGCTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045454.9 |
||
| 3UTR CAA 72 bp | GGGCTGAGAGAGGTCAGAGCCACAAGAAGCTGCGGCTaGGCTGAAGGCAAACAGTTCGAGAAACAAGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: GLREVRATRSCG*AEGKQFEKQGG Trigger: GCCACCTTGTTTCTCGAACTGTTTGCCTTCAGCCAAGCCGCAGCTTCTTGTGGCTCTGACCTCTCTCAGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045454.9 |
||
| 3UTR CAA 72 bp | CAGCAAACTCCCACCGACCAGCAGAGGACCACTTTCTaGGGATCTGCTTCCTGTGTCCGTCCACATGAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: QQTPTDQQRTTF*GSASCVRPHEN Trigger: GTTCTCATGTGGACGGACACAGGAAGCAGATCCCAAGAAAGTGGTCCTCTGCTGGTCGGTGGGAGTTTGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045454.9 |
||
| CDS GCA 90 bp | AGCTCCACTGGCCGGGGCTTGCTGGTCACCCTGCGTCTGGCTTGCTaGCGCTGGCGGCCGGCCTCCAGTTCCTGCAGCTCAGGTAGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SSTGRGLLVTLRLAC*RWRPASSSCSSGRA Trigger: TGCCCTACCTGAGCTGCAGGAACTGGAGGCCGGCCGCCAGCGGCAGCAAGCCAGACGCAGGGTGACCAGCAAGCCCCGGCCAGTGGAGCT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045454.9 ENSMUST00000218414.2 |
||
| CDS GCA 90 bp | CTGAGCTCCACTGGCCGGGGCTTGCTGGTCACCCTGCGTCTGGCTTaGTGCCGCTGGCGGCCGGCCTCCAGTTCCTGCAGCTCAGGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: LSSTGRGLLVTLRLA*CRWRPASSSCSSGR Trigger: CCTACCTGAGCTGCAGGAACTGGAGGCCGGCCGCCAGCGGCAGCAAGCCAGACGCAGGGTGACCAGCAAGCCCCGGCCAGTGGAGCTCAG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045454.9 ENSMUST00000218414.2 |
||
| CDS-3UTR CAA 90 bp | GTAACTGACCCGTACATGAAGCTGGCCTGTGGAATGCTCTCCCAAGTAGGACCCTCCACTGGCCGGGGCTaGCTGGTCACCCTGCGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: VTDPYMKLACGMLSQVGPSTGRG*LVTLRL Trigger: CAGACGCAGGGTGACCAGCAAGCCCCGGCCAGTGGA...GGGTCCTACTTGGGAGAGCATTCCACAGGCCAGCTTCATGTACGGGTCAGTTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045454.9 |
||
| CDS GCA 72 bp | GGCCGGGGCTTGCTGGTCACCCTGCGTCTGGCTTGCTaGCGCTGGCGGCCGGCCTCCAGTTCCTGCAGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: GRGLLVTLRLAC*RWRPASSSCSS Trigger: TGAGCTGCAGGAACTGGAGGCCGGCCGCCAGCGGCAGCAAGCCAGACGCAGGGTGACCAGCAAGCCCCGGCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045454.9 ENSMUST00000218414.2 |
||
| CDS GCA 72 bp | ACTGGCCGGGGCTTGCTGGTCACCCTGCGTCTGGCTTaGTGCCGCTGGCGGCCGGCCTCCAGTTCCTGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: TGRGLLVTLRLA*CRWRPASSSCS Trigger: GCTGCAGGAACTGGAGGCCGGCCGCCAGCGGCAGCAAGCCAGACGCAGGGTGACCAGCAAGCCCCGGCCAGT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045454.9 ENSMUST00000218414.2 |
||
| CDS CCA 72 bp | GCTCCACTGGCCGGGGCTTGCTGGTCACCCTGCGTCTaGCTTGCTGCCGCTGGCGGCCGGCCTCCAGTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: APLAGACWSPCV*LAAAGGRPPVP Trigger: AGGAACTGGAGGCCGGCCGCCAGCGGCAGCAAGCCAGACGCAGGGTGACCAGCAAGCCCCGGCCAGTGGAGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045454.9 ENSMUST00000218414.2 |
||
| CDS CAA 72 bp | CACTGGCCGGGGCTTGCTGGTCACCCTGCGTCTGGCTaGCTGCCGCTGGCGGCCGGCCTCCAGTTCCTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: HWPGLAGHPASG*LPLAAGLQFLQ Trigger: CTGCAGGAACTGGAGGCCGGCCGCCAGCGGCAGCAAGCCAGACGCAGGGTGACCAGCAAGCCCCGGCCAGTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045454.9 ENSMUST00000218414.2 |
||
| CDS CCA 72 bp | GGCTTGCTGGTCACCCTGCGTCTGGCTTGCTGCCGCTaGCGGCCGGCCTCCAGTTCCTGCAGCTCAGGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: GLLVTLRLACCR*RPASSSCSSGR Trigger: CCTACCTGAGCTGCAGGAACTGGAGGCCGGCCGCCAGCGGCAGCAAGCCAGACGCAGGGTGACCAGCAAGCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045454.9 ENSMUST00000218414.2 |
||
| CDS CCA 72 bp | CAAAGATGTCATTGTGAACGAATGTCCAGTCCAGAGTaGCAGGAACACACACAGAAGAGGCGACACCCAACC | + |
|
Preference number: 6 (lower is better) Translates to: QRCHCERMSSPE*QEHTQKRRHPT Trigger: GGTTGGGTGTCGCCTCTTCTGTGTGTGTTCCTGCCACTCTGGACTGGACATTCGTTCACAATGACATCTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218414.2 |
||