Pregenerated sensors for FAM205C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050141Ensembl transcript IDs: ENSMUST00000055944.11, ENSMUST00000107978.2
Found 144 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGCCTTTGTTGGGGGCGATGCAGAGCTTTGGGAGCCTGCTTGCTTaGCGTGCTTATCCTCTGTGTAAACCAGGACCTTCTGAGAGGAGA | + |
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Preference number: 1 (lower is better) Translates to: QPLLGAMQSFGSLLA*RAYPLCKPGPSERR Trigger: TCTCCTCTCAGAAGGTCCTGGTTTACACAGAGGATAAGCACGTCAAGCAAGCAGGCTCCCAAAGCTCTGCATCGCCCCCAACAAAGGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
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| 3UTR CCA 90 bp | GAGGTTCTTTGCTTTATAGGTATAGAGTATATTTGGAGAATCTCATaGCATACTTGCTTAGAAGTAGAAATGACGGGTGACAGCCTTTGT | + |
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Preference number: 1 (lower is better) Translates to: EVLCFIGIEYIWRIS*HTCLEVEMTGDSLC Trigger: ACAAAGGCTGTCACCCGTCATTTCTACTTCTAAGCAAGTATGCCATGAGATTCTCCAAATATACTCTATACCTATAAAGCAAAGAACCTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055944.11 |
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| 3UTR-3UTR GCA 90 bp | ATGACGGGTGACAGCCTTTGTTGGGGGCGATGCAGAGCTTTGGGAGCCTGCTTGGTGCAGAAGGGATGTTaGTGGAACTCTGAAGACACT | + |
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Preference number: 2 (lower is better) Translates to: MTGDSLCWGRCRALGACLVQKGC*WNSEDT Trigger: AGTGTCTTCAGAGTTCCAGCAACATCCCTTCTGCAC...CAAGCAGGCTCCCAAAGCTCTGCATCGCCCCCAACAAAGGCTGTCACCCGTCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
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| 3UTR-3UTR TCA 90 bp | GCCTTTGTTGGGGGCGATGCAGAGCTTTGGGAGCCTGCTTGCTTGACGTGCTTAATGTTGCTGGAACTCTaGAGACACTGTAGGTGTCCA | + |
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Preference number: 2 (lower is better) Translates to: AFVGGDAELWEPACLTCLMLLEL*RHCRCP Trigger: TGGACACCTACAGTGTCTTCAGAGTTCCAGCAACAT...TAAGCACGTCAAGCAAGCAGGCTCCCAAAGCTCTGCATCGCCCCCAACAAAGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
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| 3UTR-3UTR CCA 90 bp | ATGACGGGTGACAGCCTTTGTTGGGGGCGATGCAGAGCTTTGGGAGCCTGCTTGCAGAAGGGATGTTGCTaGAACTCTGAAGACACTGTA | + |
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Preference number: 2 (lower is better) Translates to: MTGDSLCWGRCRALGACLQKGCC*NSEDTV Trigger: TACAGTGTCTTCAGAGTTCCAGCAACATCCCTTCTG...CAAGCAGGCTCCCAAAGCTCTGCATCGCCCCCAACAAAGGCTGTCACCCGTCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
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| 3UTR-3UTR CCA 90 bp | TGGGGGCGATGCAGAGCTTTGGGAGCCTGCTTGCTTGACGTGCTTATCCTCTGTCAGAAGGGATGTTGCTaGAACTCTGAAGACACTGTA | + |
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Preference number: 2 (lower is better) Translates to: WGRCRALGACLLDVLILCQKGCC*NSEDTV Trigger: TACAGTGTCTTCAGAGTTCCAGCAACATCCCTTCTG...ACAGAGGATAAGCACGTCAAGCAAGCAGGCTCCCAAAGCTCTGCATCGCCCCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
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| 3UTR-3UTR GCA 90 bp | ACTTGCTTAGAAGTAGAAATGACGGGTGACAGCCTTTGTTGGGGGCGATGCAGAGCCCAGGATTGGTTGTaGAGAAGGGATGTTGCTGGA | + |
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Preference number: 2 (lower is better) Translates to: TCLEVEMTGDSLCWGRCRAQDWL*RRDVAG Trigger: TCCAGCAACATCCCTTCTGCACAACCAATCCTGGGC...TCTGCATCGCCCCCAACAAAGGCTGTCACCCGTCATTTCTACTTCTAAGCAAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
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| 3UTR-3UTR GCA 90 bp | GGAGGTTCTTTGCTTTATAGGTATAGAGTATATTTGGAGAATCTCATGGCATACAGAGCTTTGGGAGCCTaGTTGCTTGACGTGCTTATC | + |
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Preference number: 2 (lower is better) Translates to: GGSLLYRYRVYLENLMAYRALGA*LLDVLI Trigger: GATAAGCACGTCAAGCAAGCAGGCTCCCAAAGCTCT...GTATGCCATGAGATTCTCCAAATATACTCTATACCTATAAAGCAAAGAACCTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055944.11 |
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| 3UTR-3UTR CAA 90 bp | ATGACGGGTGACAGCCTTTGTTGGGGGCGATGCAGAGCTTTGGGAGCCTGCTTGCCATGGGGCCCAGGATaGGTTGTGCAGAAGGGATGT | + |
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Preference number: 3 (lower is better) Translates to: MTGDSLCWGRCRALGACLPWGPG*VVQKGC Trigger: ACATCCCTTCTGCACAACCAATCCTGGGCCCCATGG...CAAGCAGGCTCCCAAAGCTCTGCATCGCCCCCAACAAAGGCTGTCACCCGTCAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
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| 3UTR CCA 72 bp | CGGGTGACAGCCTTTGTTGGGGGCGATGCAGAGCTTTaGGAGCCTGCTTGCTTGACGTGCTTATCCTCTGTG | + |
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Preference number: 3 (lower is better) Translates to: RVTAFVGGDAEL*EPACLTCLSSV Trigger: CACAGAGGATAAGCACGTCAAGCAAGCAGGCTCCCAAAGCTCTGCATCGCCCCCAACAAAGGCTGTCACCCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
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| 3UTR-3UTR CAA 90 bp | TTTGTTGGGGGCGATGCAGAGCTTTGGGAGCCTGCTTGCTTGACGTGCTTATCCCCATGGGGCCCAGGATaGGTTGTGCAGAAGGGATGT | + |
|
Preference number: 3 (lower is better) Translates to: FVGGDAELWEPACLTCLSPWGPG*VVQKGC Trigger: ACATCCCTTCTGCACAACCAATCCTGGGCCCCATGG...GGATAAGCACGTCAAGCAAGCAGGCTCCCAAAGCTCTGCATCGCCCCCAACAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
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| 3UTR GCA 72 bp | GTAGAAATGACGGGTGACAGCCTTTGTTGGGGGCGATaGAGAGCTTTGGGAGCCTGCTTGCTTGACGTGCTT | + |
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Preference number: 3 (lower is better) Translates to: VEMTGDSLCWGR*RALGACLLDVL Trigger: AAGCACGTCAAGCAAGCAGGCTCCCAAAGCTCTGCATCGCCCCCAACAAAGGCTGTCACCCGTCATTTCTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
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| 3UTR TCA 72 bp | TTGGGGGCGATGCAGAGCTTTGGGAGCCTGCTTGCTTaGCGTGCTTATCCTCTGTGTAAACCAGGACCTTCT | + |
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Preference number: 3 (lower is better) Translates to: LGAMQSFGSLLA*RAYPLCKPGPS Trigger: AGAAGGTCCTGGTTTACACAGAGGATAAGCACGTCAAGCAAGCAGGCTCCCAAAGCTCTGCATCGCCCCCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
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| 3UTR GCA 72 bp | CCATGGGGCCCAGGATTGGTTGTGCAGAAGGGATGTTaGTGGAACTCTGAAGACACTGTAGGTGTCCAGGAA | + |
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Preference number: 3 (lower is better) Translates to: PWGPGLVVQKGC*WNSEDTVGVQE Trigger: TTCCTGGACACCTACAGTGTCTTCAGAGTTCCAGCAACATCCCTTCTGCACAACCAATCCTGGGCCCCATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
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| 3UTR GCA 72 bp | AGTTGTGGGAGTAGCCATGGGGCCCAGGATTGGTTGTaGAGAAGGGATGTTGCTGGAACTCTGAAGACACTG | + |
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Preference number: 3 (lower is better) Translates to: SCGSSHGAQDWL*RRDVAGTLKTL Trigger: CAGTGTCTTCAGAGTTCCAGCAACATCCCTTCTGCACAACCAATCCTGGGCCCCATGGCTACTCCCACAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
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| 3UTR CCA 72 bp | TGCTTAGAAGTAGAAATGACGGGTGACAGCCTTTGTTaGGGGCGATGCAGAGCTTTGGGAGCCTGCTTGCTT | + |
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Preference number: 3 (lower is better) Translates to: CLEVEMTGDSLC*GRCRALGACLL Trigger: AAGCAAGCAGGCTCCCAAAGCTCTGCATCGCCCCCAACAAAGGCTGTCACCCGTCATTTCTACTTCTAAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
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| 3UTR GCA 72 bp | GGTATAGAGTATATTTGGAGAATCTCATGGCATACTTaGTTAGAAGTAGAAATGACGGGTGACAGCCTTTGT | + |
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Preference number: 3 (lower is better) Translates to: GIEYIWRISWHT*LEVEMTGDSLC Trigger: ACAAAGGCTGTCACCCGTCATTTCTACTTCTAAGCAAGTATGCCATGAGATTCTCCAAATATACTCTATACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
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| 3UTR-3UTR CAA 90 bp | CCATTCTCCACTCAAGTCCCTTTACCCATAGGATATGTTTATATGATATATATGAGGTATAGAGTATATTaGGAGAATCTCATGGCATAC | + |
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Preference number: 3 (lower is better) Translates to: PFSTQVPLPIGYVYMIYMRYRVY*ENLMAY Trigger: GTATGCCATGAGATTCTCCAAATATACTCTATACCT...CATATATATCATATAAACATATCCTATGGGTAAAGGGACTTGAGTGGAGAATGG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055944.11 |
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| 3UTR CCA 72 bp | CAGGAGGTTCTTTGCTTTATAGGTATAGAGTATATTTaGAGAATCTCATGGCATACTTGCTTAGAAGTAGAA | + |
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Preference number: 3 (lower is better) Translates to: QEVLCFIGIEYI*RISWHTCLEVE Trigger: TTCTACTTCTAAGCAAGTATGCCATGAGATTCTCCAAATATACTCTATACCTATAAAGCAAAGAACCTCCTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055944.11 |
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| CDS-3UTR TCA 90 bp | ATGACGGGTGACAGCCTTTGTTGGGGGCGATGCAGAGCTTTGGGAGCCTGCTTGACCCCCAGCAACTGCTaGATTTCCAGAGCCATGGCA | + |
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Preference number: 4 (lower is better) Translates to: MTGDSLCWGRCRALGACLTPSNC*ISRAMA Trigger: TGCCATGGCTCTGGAAATTCAGCAGTTGCTGGGGGT...CAAGCAGGCTCCCAAAGCTCTGCATCGCCCCCAACAAAGGCTGTCACCCGTCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
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| 3UTR CAA 72 bp | ACGGGTGACAGCCTTTGTTGGGGGCGATGCAGAGCTTaGGGAGCCTGCTTGCTTGACGTGCTTATCCTCTGT | + |
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Preference number: 4 (lower is better) Translates to: TGDSLCWGRCRA*GACLLDVLILC Trigger: ACAGAGGATAAGCACGTCAAGCAAGCAGGCTCCCAAAGCTCTGCATCGCCCCCAACAAAGGCTGTCACCCGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
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| CDS-3UTR CCA 90 bp | TGTTGGGGGCGATGCAGAGCTTTGGGAGCCTGCTTGCTTGACGTGCTTATCCTCCCTCTGCTCGGACTTTaGCAGAACTCTTCTTGGGCT | + |
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Preference number: 4 (lower is better) Translates to: CWGRCRALGACLLDVLILPLLGL*QNSSWA Trigger: AGCCCAAGAAGAGTTCTGCCAAAGTCCGAGCAGAGG...GAGGATAAGCACGTCAAGCAAGCAGGCTCCCAAAGCTCTGCATCGCCCCCAACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
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| CDS-3UTR CCA 90 bp | GCCTTTGTTGGGGGCGATGCAGAGCTTTGGGAGCCTGCTTGCTTGACGTGCTTACCTCTGCTCGGACTTTaGCAGAACTCTTCTTGGGCT | + |
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Preference number: 4 (lower is better) Translates to: AFVGGDAELWEPACLTCLPLLGL*QNSSWA Trigger: AGCCCAAGAAGAGTTCTGCCAAAGTCCGAGCAGAGG...TAAGCACGTCAAGCAAGCAGGCTCCCAAAGCTCTGCATCGCCCCCAACAAAGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
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| CDS-3UTR TCA 90 bp | GCCTTTGTTGGGGGCGATGCAGAGCTTTGGGAGCCTGCTTGCTTGACGTGCTTACACTTTGGAGAGCTCTaGACTCTGGCCATTCAACAC | + |
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Preference number: 4 (lower is better) Translates to: AFVGGDAELWEPACLTCLHFGEL*TLAIQH Trigger: GTGTTGAATGGCCAGAGTTCAGAGCTCTCCAAAGTG...TAAGCACGTCAAGCAAGCAGGCTCCCAAAGCTCTGCATCGCCCCCAACAAAGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
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| CDS-3UTR CCA 90 bp | GCCTTTGTTGGGGGCGATGCAGAGCTTTGGGAGCCTGCTTGCTTGACGTGCTTAGGCCATTCAACACTTTaGAGAGCTCTGAACTCTGGC | + |
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Preference number: 4 (lower is better) Translates to: AFVGGDAELWEPACLTCLGHSTL*RALNSG Trigger: GCCAGAGTTCAGAGCTCTCCAAAGTGTTGAATGGCC...TAAGCACGTCAAGCAAGCAGGCTCCCAAAGCTCTGCATCGCCCCCAACAAAGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
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| CDS-3UTR CCA 90 bp | GCCTTTGTTGGGGGCGATGCAGAGCTTTGGGAGCCTGCTTGCTTGACGTGCTTATGGCAGAACTCTTCTTaGGCTCTCCAGTCTTGGGTT | + |
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Preference number: 4 (lower is better) Translates to: AFVGGDAELWEPACLTCLWQNSS*ALQSWV Trigger: AACCCAAGACTGGAGAGCCCAAGAAGAGTTCTGCCA...TAAGCACGTCAAGCAAGCAGGCTCCCAAAGCTCTGCATCGCCCCCAACAAAGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
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| 3UTR CAA 72 bp | AGCAGTTGTGGGAGTAGCCATGGGGCCCAGGATTGGTaGTGCAGAAGGGATGTTGCTGGAACTCTGAAGACA | + |
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Preference number: 4 (lower is better) Translates to: SSCGSSHGAQDW*CRRDVAGTLKT Trigger: TGTCTTCAGAGTTCCAGCAACATCCCTTCTGCACAACCAATCCTGGGCCCCATGGCTACTCCCACAACTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
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| 3UTR CAA 72 bp | CTTTGTTGGGGGCGATGCAGAGCTTTGGGAGCCTGCTaGCTTGACGTGCTTATCCTCTGTGTAAACCAGGAC | + |
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Preference number: 4 (lower is better) Translates to: LCWGRCRALGAC*LDVLILCVNQD Trigger: GTCCTGGTTTACACAGAGGATAAGCACGTCAAGCAAGCAGGCTCCCAAAGCTCTGCATCGCCCCCAACAAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
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| CDS-3UTR TCA 90 bp | GCCTTTGTTGGGGGCGATGCAGAGCTTTGGGAGCCTGCTTGCTTGACGTGCTTAAGTGGACAGAGGAGCTaGCAGAGTCAATTTCTGATC | + |
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Preference number: 4 (lower is better) Translates to: AFVGGDAELWEPACLTCLSGQRS*QSQFLI Trigger: GATCAGAAATTGACTCTGTCAGCTCCTCTGTCCACT...TAAGCACGTCAAGCAAGCAGGCTCCCAAAGCTCTGCATCGCCCCCAACAAAGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
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| CDS-3UTR TCA 90 bp | ATGACGGGTGACAGCCTTTGTTGGGGGCGATGCAGAGCTTTGGGAGCCTGCTTGTCAGGGTTAACCCAGTaGGAAAAGAACGTCATCTTG | + |
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Preference number: 4 (lower is better) Translates to: MTGDSLCWGRCRALGACLSGLTQ*EKNVIL Trigger: CAAGATGACGTTCTTTTCTCACTGGGTTAACCCTGA...CAAGCAGGCTCCCAAAGCTCTGCATCGCCCCCAACAAAGGCTGTCACCCGTCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
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| CDS-3UTR CCA 90 bp | TGTTGGGGGCGATGCAGAGCTTTGGGAGCCTGCTTGCTTGACGTGCTTATCCTCGGTCATTCAACACTTTaGGTGGAGACAATGCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: CWGRCRALGACLLDVLILGHSTL*VETMPP Trigger: TGGAGGCATTGTCTCCACCCAAAGTGTTGAATGACC...GAGGATAAGCACGTCAAGCAAGCAGGCTCCCAAAGCTCTGCATCGCCCCCAACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
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| CDS-3UTR CCA 90 bp | GAAATGACGGGTGACAGCCTTTGTTGGGGGCGATGCAGAGCTTTGGGAGCCTGCGAGAGCTCTGAACTCTaGTCATTCAACACTTTGGGT | + |
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Preference number: 4 (lower is better) Translates to: EMTGDSLCWGRCRALGACESSEL*SFNTLG Trigger: ACCCAAAGTGTTGAATGACCAGAGTTCAGAGCTCTC...GCAGGCTCCCAAAGCTCTGCATCGCCCCCAACAAAGGCTGTCACCCGTCATTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
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| CDS-3UTR CCA 90 bp | TGGGGGCGATGCAGAGCTTTGGGAGCCTGCTTGCTTGACGTGCTTATCCTCTGTGAGAGCTCTGAACTCTaGCCATTCAACACTTTGGAG | + |
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Preference number: 4 (lower is better) Translates to: WGRCRALGACLLDVLILCESSEL*PFNTLE Trigger: CTCCAAAGTGTTGAATGGCCAGAGTTCAGAGCTCTC...ACAGAGGATAAGCACGTCAAGCAAGCAGGCTCCCAAAGCTCTGCATCGCCCCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
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| CDS-3UTR CCA 90 bp | GAAATGACGGGTGACAGCCTTTGTTGGGGGCGATGCAGAGCTTTGGGAGCCTGCGAGAGCTCTGAACTCTaGTCATTCAACACTTTGGAG | + |
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Preference number: 4 (lower is better) Translates to: EMTGDSLCWGRCRALGACESSEL*SFNTLE Trigger: CTCCAAAGTGTTGAATGACCAGAGTTCAGAGCTCTC...GCAGGCTCCCAAAGCTCTGCATCGCCCCCAACAAAGGCTGTCACCCGTCATTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
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| CDS-3UTR CCA 90 bp | GAAATGACGGGTGACAGCCTTTGTTGGGGGCGATGCAGAGCTTTGGGAGCCTGCGGTCATTCAACACTTTaGAGAGCTCTGAACTCTGGT | + |
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Preference number: 4 (lower is better) Translates to: EMTGDSLCWGRCRALGACGHSTL*RALNSG Trigger: ACCAGAGTTCAGAGCTCTCCAAAGTGTTGAATGACC...GCAGGCTCCCAAAGCTCTGCATCGCCCCCAACAAAGGCTGTCACCCGTCATTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
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| CDS-3UTR CCA 90 bp | TGTTGGGGGCGATGCAGAGCTTTGGGAGCCTGCTTGCTTGACGTGCTTATCCTCTTCCTCTTCTTTTGTTaGTTTGCAGGCACCCCATGC | + |
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Preference number: 4 (lower is better) Translates to: CWGRCRALGACLLDVLILFLFFC*FAGTPC Trigger: GCATGGGGTGCCTGCAAACCAACAAAAGAAGAGGAA...GAGGATAAGCACGTCAAGCAAGCAGGCTCCCAAAGCTCTGCATCGCCCCCAACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
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| CDS-3UTR CCA 90 bp | AGTTGTGGGAGTAGCCATGGGGCCCAGGATTGGTTGTGCAGAAGGGATGTTGCTCATGTTTCTCCAGGTTaGGTTCCTCTGCTCGGACTT | + |
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Preference number: 4 (lower is better) Translates to: SCGSSHGAQDWLCRRDVAHVSPG*VPLLGL Trigger: AAGTCCGAGCAGAGGAACCCAACCTGGAGAAACATG...AGCAACATCCCTTCTGCACAACCAATCCTGGGCCCCATGGCTACTCCCACAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
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| CDS-3UTR GCA 90 bp | ACTTGCTTAGAAGTAGAAATGACGGGTGACAGCCTTTGTTGGGGGCGATGCAGACCAGAGCCATGGCATTaGAGATGGGGCAGGATGGAT | + |
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Preference number: 4 (lower is better) Translates to: TCLEVEMTGDSLCWGRCRPEPWH*RWGRMD Trigger: ATCCATCCTGCCCCATCTGCAATGCCATGGCTCTGG...TCTGCATCGCCCCCAACAAAGGCTGTCACCCGTCATTTCTACTTCTAAGCAAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
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| CDS-3UTR CCA 90 bp | AGTTGTGGGAGTAGCCATGGGGCCCAGGATTGGTTGTGCAGAAGGGATGTTGCTGGCCATTCAACACTTTaGAGAGCTCTGAACTCTGGT | + |
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Preference number: 4 (lower is better) Translates to: SCGSSHGAQDWLCRRDVAGHSTL*RALNSG Trigger: ACCAGAGTTCAGAGCTCTCCAAAGTGTTGAATGGCC...AGCAACATCCCTTCTGCACAACCAATCCTGGGCCCCATGGCTACTCCCACAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
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| CDS-3UTR TCA 90 bp | CGATGCAGAGCTTTGGGAGCCTGCTTGCTTGACGTGCTTATCCTCTGTGTAAACTGGAGTGTTGGGAACTaGGCTCTGAACTCTGGTCAT | + |
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Preference number: 4 (lower is better) Translates to: RCRALGACLLDVLILCVNWSVGN*ALNSGH Trigger: ATGACCAGAGTTCAGAGCTCAGTTCCCAACACTCCA...GTTTACACAGAGGATAAGCACGTCAAGCAAGCAGGCTCCCAAAGCTCTGCATCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
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| CDS-3UTR TCA 90 bp | GGCCCAGGATTGGTTGTGCAGAAGGGATGTTGCTGGAACTCTGAAGACACTGTATTCCATTTCAGCTTCTaGGGGCGCTGCTTGGTTCTT | + |
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Preference number: 4 (lower is better) Translates to: GPGLVVQKGCCWNSEDTVFHFSF*GRCLVL Trigger: AAGAACCAAGCAGCGCCCTCAGAAGCTGAAATGGAA...TACAGTGTCTTCAGAGTTCCAGCAACATCCCTTCTGCACAACCAATCCTGGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107978.2 |
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| CDS-3UTR GCA 90 bp | TTTGTTGGGGGCGATGCAGAGCTTTGGGAGCCTGCTTGCTTGACGTGCTTATCCTTTGGGTGGAGACAATaGCTCCAGACAAGAAAAGCT | + |
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Preference number: 4 (lower is better) Translates to: FVGGDAELWEPACLTCLSFGWRQ*LQTRKA Trigger: AGCTTTTCTTGTCTGGAGGCATTGTCTCCACCCAAA...GGATAAGCACGTCAAGCAAGCAGGCTCCCAAAGCTCTGCATCGCCCCCAACAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
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| CDS-3UTR GCA 90 bp | AGTTGTGGGAGTAGCCATGGGGCCCAGGATTGGTTGTGCAGAAGGGATGTTGCTGGCTTTGAGATCTTTTaGATGTTTCTCCAGGTTGGG | + |
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Preference number: 4 (lower is better) Translates to: SCGSSHGAQDWLCRRDVAGFEIF*MFLQVG Trigger: CCCAACCTGGAGAAACATGCAAAAGATCTCAAAGCC...AGCAACATCCCTTCTGCACAACCAATCCTGGGCCCCATGGCTACTCCCACAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
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| CDS-3UTR CCA 90 bp | CCATGGGGCCCAGGATTGGTTGTGCAGAAGGGATGTTGCTGGAACTCTGAAGACCTGAGCTCTGAACTCTaGTCATTCAACACTTTGGAG | + |
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Preference number: 4 (lower is better) Translates to: PWGPGLVVQKGCCWNSEDLSSEL*SFNTLE Trigger: CTCCAAAGTGTTGAATGACCAGAGTTCAGAGCTCAG...GTCTTCAGAGTTCCAGCAACATCCCTTCTGCACAACCAATCCTGGGCCCCATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
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| CDS-3UTR CCA 90 bp | TTTGTTGGGGGCGATGCAGAGCTTTGGGAGCCTGCTTGCTTGACGTGCTTATCCATGTTCCTCTTAGCATaGAGAGGCTTGGCTTTGAGA | + |
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Preference number: 4 (lower is better) Translates to: FVGGDAELWEPACLTCLSMFLLA*RGLALR Trigger: TCTCAAAGCCAAGCCTCTCCATGCTAAGAGGAACAT...GGATAAGCACGTCAAGCAAGCAGGCTCCCAAAGCTCTGCATCGCCCCCAACAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
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| CDS-3UTR TCA 90 bp | CGTGCTTATCCTCTGTGTAAACCAGGACCTTCTGAGAGGAGAGCTGACATTGGTCACTTTGGAGAGCTCTaGACTCTGGCCATTCAACAC | + |
|
Preference number: 4 (lower is better) Translates to: RAYPLCKPGPSERRADIGHFGEL*TLAIQH Trigger: GTGTTGAATGGCCAGAGTTCAGAGCTCTCCAAAGTG...ACCAATGTCAGCTCTCCTCTCAGAAGGTCCTGGTTTACACAGAGGATAAGCACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
||
| CDS-3UTR TCA 90 bp | TTTGTTGGGGGCGATGCAGAGCTTTGGGAGCCTGCTTGCTTGACGTGCTTATCCTTGATTGTGACTGCATaGACTTGGGTGGCAATGAAA | + |
|
Preference number: 4 (lower is better) Translates to: FVGGDAELWEPACLTCLSLIVTA*TWVAMK Trigger: TTTCATTGCCACCCAAGTTCATGCAGTCACAATCAA...GGATAAGCACGTCAAGCAAGCAGGCTCCCAAAGCTCTGCATCGCCCCCAACAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
||
| CDS-3UTR CCA 90 bp | GGATTGGTTGTGCAGAAGGGATGTTGCTGGAACTCTGAAGACACTGTAGGTGTCTGGCAGAACTCTTCTTaGGCTCTCCAGTCTTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: GLVVQKGCCWNSEDTVGVWQNSS*ALQSWV Trigger: AACCCAAGACTGGAGAGCCCAAGAAGAGTTCTGCCA...GACACCTACAGTGTCTTCAGAGTTCCAGCAACATCCCTTCTGCACAACCAATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
||
| CDS-3UTR TCA 90 bp | CGTGCTTATCCTCTGTGTAAACCAGGACCTTCTGAGAGGAGAGCTGACATTGGTCACTTTGGAGAGCTCTaGACTCTGGTCATTCAACAC | + |
|
Preference number: 4 (lower is better) Translates to: RAYPLCKPGPSERRADIGHFGEL*TLVIQH Trigger: GTGTTGAATGACCAGAGTTCAGAGCTCTCCAAAGTG...ACCAATGTCAGCTCTCCTCTCAGAAGGTCCTGGTTTACACAGAGGATAAGCACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
||
| CDS-3UTR TCA 90 bp | TCATGGCATACTTGCTTAGAAGTAGAAATGACGGGTGACAGCCTTTGTTGGGGGTTCCATTTCAGCTTCTaGGGGCGCTTGGTTCTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: SWHTCLEVEMTGDSLCWGFHFSF*GRLVLR Trigger: TCGAAGAACCAAGCGCCCTCAGAAGCTGAAATGGAA...CCCCCAACAAAGGCTGTCACCCGTCATTTCTACTTCTAAGCAAGTATGCCATGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055944.11 |
||
| CDS-3UTR TCA 90 bp | CGATGCAGAGCTTTGGGAGCCTGCTTGCTTGACGTGCTTATCCTCTGTGTAAACTCAGGGTTAACCCAGTaGGAAAAGAACGTCATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RCRALGACLLDVLILCVNSGLTQ*EKNVIL Trigger: CAAGATGACGTTCTTTTCTCACTGGGTTAACCCTGA...GTTTACACAGAGGATAAGCACGTCAAGCAAGCAGGCTCCCAAAGCTCTGCATCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
||
| CDS-3UTR CCA 90 bp | GACGTGCTTATCCTCTGTGTAAACCAGGACCTTCTGAGAGGAGAGCTGACATTGGGTCATTCAACACTTTaGGTGGAGACAATGCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: DVLILCVNQDLLRGELTLGHSTL*VETMPP Trigger: TGGAGGCATTGTCTCCACCCAAAGTGTTGAATGACC...CAATGTCAGCTCTCCTCTCAGAAGGTCCTGGTTTACACAGAGGATAAGCACGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
||
| CDS-3UTR CCA 90 bp | ACTTGCTTAGAAGTAGAAATGACGGGTGACAGCCTTTGTTGGGGGCGATGCAGATTCCTCTTCTTTTGTTaGTTTGCAGGCACCCCATGC | + |
|
Preference number: 4 (lower is better) Translates to: TCLEVEMTGDSLCWGRCRFLFFC*FAGTPC Trigger: GCATGGGGTGCCTGCAAACCAACAAAAGAAGAGGAA...TCTGCATCGCCCCCAACAAAGGCTGTCACCCGTCATTTCTACTTCTAAGCAAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
||
| CDS-3UTR TCA 90 bp | CGTGCTTATCCTCTGTGTAAACCAGGACCTTCTGAGAGGAGAGCTGACATTGGTGAACTTGGGTGGCAATaGAATGTCTTTGGAGTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: RAYPLCKPGPSERRADIGELGWQ*NVFGVL Trigger: CAACACTCCAAAGACATTTCATTGCCACCCAAGTTC...ACCAATGTCAGCTCTCCTCTCAGAAGGTCCTGGTTTACACAGAGGATAAGCACG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
||
| CDS-3UTR TCA 90 bp | CGATGCAGAGCTTTGGGAGCCTGCTTGCTTGACGTGCTTATCCTCTGTGTAAACTTGATTGTGACTGCATaGACTTGGGTGGCAATGAAA | + |
|
Preference number: 4 (lower is better) Translates to: RCRALGACLLDVLILCVNLIVTA*TWVAMK Trigger: TTTCATTGCCACCCAAGTTCATGCAGTCACAATCAA...GTTTACACAGAGGATAAGCACGTCAAGCAAGCAGGCTCCCAAAGCTCTGCATCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
||
| CDS-3UTR CCA 90 bp | CGATGCAGAGCTTTGGGAGCCTGCTTGCTTGACGTGCTTATCCTCTGTGTAAACAGTGCCTCAGTAGACTaGAAGAGGTCTTTTTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RCRALGACLLDVLILCVNSASVD*KRSFCS Trigger: AGAACAAAAAGACCTCTTCCAGTCTACTGAGGCACT...GTTTACACAGAGGATAAGCACGTCAAGCAAGCAGGCTCCCAAAGCTCTGCATCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
||
| CDS-3UTR CCA 90 bp | TCATGGCATACTTGCTTAGAAGTAGAAATGACGGGTGACAGCCTTTGTTGGGGGGGTCATTCAACACTTTaGAGAGCTCTGAACTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SWHTCLEVEMTGDSLCWGGHSTL*RALNSG Trigger: GCCAGAGTTCAGAGCTCTCCAAAGTGTTGAATGACC...CCCCCAACAAAGGCTGTCACCCGTCATTTCTACTTCTAAGCAAGTATGCCATGA 48% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
||
| CDS-3UTR CCA 90 bp | CGTGCTTATCCTCTGTGTAAACCAGGACCTTCTGAGAGGAGAGCTGACATTGGTGGTCATTCAACACTTTaGAGAGCTCTGAACTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RAYPLCKPGPSERRADIGGHSTL*RALNSG Trigger: ACCAGAGTTCAGAGCTCTCCAAAGTGTTGAATGACC...ACCAATGTCAGCTCTCCTCTCAGAAGGTCCTGGTTTACACAGAGGATAAGCACG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
||
| CDS-3UTR TCA 90 bp | CCCATCAAAATGAAAGCAGATTTAAGCACCCATACCACACAGAGAACTTTTCCTACCCCCAGCAACTGCTaGATTTCCAGAGCCATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PIKMKADLSTHTTQRTFPTPSNC*ISRAMA Trigger: TGCCATGGCTCTGGAAATTCAGCAGTTGCTGGGGGT...AGGAAAAGTTCTCTGTGTGGTATGGGTGCTTAAATCTGCTTTCATTTTGATGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000055944.11 |
||
| CDS-3UTR TCA 90 bp | TCATGGCATACTTGCTTAGAAGTAGAAATGACGGGTGACAGCCTTTGTTGGGGGGAACTTGGGTGGCAATaGAATGTCTTTGGAGTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SWHTCLEVEMTGDSLCWGELGWQ*NVFGVL Trigger: CAACACTCCAAAGACATTTCATTGCCACCCAAGTTC...CCCCCAACAAAGGCTGTCACCCGTCATTTCTACTTCTAAGCAAGTATGCCATGA 47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
||
| CDS-3UTR TCA 90 bp | GACGTGCTTATCCTCTGTGTAAACCAGGACCTTCTGAGAGGAGAGCTGACATTGGACAGAGTCAATTTCTaGTCTGTTGATTGTGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: DVLILCVNQDLLRGELTLDRVNF*SVDCDC Trigger: GCAGTCACAATCAACAGATCAGAAATTGACTCTGTC...CAATGTCAGCTCTCCTCTCAGAAGGTCCTGGTTTACACAGAGGATAAGCACGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
||
| CDS-3UTR GCA 90 bp | GGCCCAGGATTGGTTGTGCAGAAGGGATGTTGCTGGAACTCTGAAGACACTGTACTATCACTAGGCTTTTaGTTGATTCTTCGGAAACAC | + |
|
Preference number: 4 (lower is better) Translates to: GPGLVVQKGCCWNSEDTVLSLGF*LILRKH Trigger: GTGTTTCCGAAGAATCAAGCAAAAGCCTAGTGATAG...TACAGTGTCTTCAGAGTTCCAGCAACATCCCTTCTGCACAACCAATCCTGGGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
||
| CDS-3UTR GCA 90 bp | ACCCATCAAAATGAAAGCAGATTTAAGCACCCATACCACACAGAGAACTTTTCCCCAGAGCCATGGCATTaGAGATGGGGCAGGATGGAT | + |
|
Preference number: 4 (lower is better) Translates to: THQNESRFKHPYHTENFSPEPWH*RWGRMD Trigger: ATCCATCCTGCCCCATCTGCAATGCCATGGCTCTGG...GGAAAAGTTCTCTGTGTGGTATGGGTGCTTAAATCTGCTTTCATTTTGATGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000055944.11 |
||
| CDS-3UTR GCA 90 bp | GACGTGCTTATCCTCTGTGTAAACCAGGACCTTCTGAGAGGAGAGCTGACATTGCTATCACTAGGCTTTTaGTTGATTCTTCGGAAACAC | + |
|
Preference number: 4 (lower is better) Translates to: DVLILCVNQDLLRGELTLLSLGF*LILRKH Trigger: GTGTTTCCGAAGAATCAAGCAAAAGCCTAGTGATAG...CAATGTCAGCTCTCCTCTCAGAAGGTCCTGGTTTACACAGAGGATAAGCACGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
||
| CDS-3UTR CCA 90 bp | AAGATTTATTTCTATCTTCGGTGGACCTTAAACAAGAGGCCTCCATTCTCCACTGGCCATTCAACACTTTaGAGAGCTCTGAACTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: KIYFYLRWTLNKRPPFSTGHSTL*RALNSG Trigger: GCCAGAGTTCAGAGCTCTCCAAAGTGTTGAATGGCC...AGTGGAGAATGGAGGCCTCTTGTTTAAGGTCCACCGAAGATAGAAATAAATCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055944.11 |
||
| CDS-3UTR TCA 90 bp | AAGATTTATTTCTATCTTCGGTGGACCTTAAACAAGAGGCCTCCATTCTCCACTAGTGGACAGAGGAGCTaGCAGAGTCAATTTCTGATC | + |
|
Preference number: 4 (lower is better) Translates to: KIYFYLRWTLNKRPPFSTSGQRS*QSQFLI Trigger: GATCAGAAATTGACTCTGTCAGCTCCTCTGTCCACT...AGTGGAGAATGGAGGCCTCTTGTTTAAGGTCCACCGAAGATAGAAATAAATCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055944.11 |
||
| CDS-3UTR CCA 90 bp | AAGATTTATTTCTATCTTCGGTGGACCTTAAACAAGAGGCCTCCATTCTCCACTGGCCATTCAACACTTTaGAGAGCTCTGAACTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: KIYFYLRWTLNKRPPFSTGHSTL*RALNSG Trigger: ACCAGAGTTCAGAGCTCTCCAAAGTGTTGAATGGCC...AGTGGAGAATGGAGGCCTCTTGTTTAAGGTCCACCGAAGATAGAAATAAATCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055944.11 |
||
| CDS-3UTR TCA 90 bp | GGAGGTTCTTTGCTTTATAGGTATAGAGTATATTTGGAGAATCTCATGGCATACTGGAGTGTTGGGAACTaGGCTCTGAACTCTGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: GGSLLYRYRVYLENLMAYWSVGN*ALNSGH Trigger: ATGACCAGAGTTCAGAGCTCAGTTCCCAACACTCCA...GTATGCCATGAGATTCTCCAAATATACTCTATACCTATAAAGCAAAGAACCTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055944.11 |
||
| CDS-3UTR CCA 90 bp | CAGGAGGTTCTTTGCTTTATAGGTATAGAGTATATTTGGAGAATCTCATGGCATCATGTTTCTCCAGGTTaGGTTCCTCTGCTCGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: QEVLCFIGIEYIWRISWHHVSPG*VPLLGL Trigger: AAGTCCGAGCAGAGGAACCCAACCTGGAGAAACATG...ATGCCATGAGATTCTCCAAATATACTCTATACCTATAAAGCAAAGAACCTCCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055944.11 |
||
| CDS-3UTR CCA 90 bp | AAGATTTATTTCTATCTTCGGTGGACCTTAAACAAGAGGCCTCCATTCTCCACTATGTTCCTCTTAGCATaGAGAGGCTTGGCTTTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: KIYFYLRWTLNKRPPFSTMFLLA*RGLALR Trigger: TCTCAAAGCCAAGCCTCTCCATGCTAAGAGGAACAT...AGTGGAGAATGGAGGCCTCTTGTTTAAGGTCCACCGAAGATAGAAATAAATCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055944.11 |
||
| CDS-3UTR TCA 90 bp | ACCCATCAAAATGAAAGCAGATTTAAGCACCCATACCACACAGAGAACTTTTCCGACAGAGTCAATTTCTaGTCTGTTGATTGTGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: THQNESRFKHPYHTENFSDRVNF*SVDCDC Trigger: GCAGTCACAATCAACAGATCAGAAATTGACTCTGTC...GGAAAAGTTCTCTGTGTGGTATGGGTGCTTAAATCTGCTTTCATTTTGATGGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055944.11 |
||
| CDS-3UTR GCA 90 bp | CAGGAGGTTCTTTGCTTTATAGGTATAGAGTATATTTGGAGAATCTCATGGCATGGCTTTGAGATCTTTTaGATGTTTCTCCAGGTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: QEVLCFIGIEYIWRISWHGFEIF*MFLQVG Trigger: CCCAACCTGGAGAAACATGCAAAAGATCTCAAAGCC...ATGCCATGAGATTCTCCAAATATACTCTATACCTATAAAGCAAAGAACCTCCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055944.11 |
||
| CDS-3UTR CCA 90 bp | CCATTCTCCACTCAAGTCCCTTTACCCATAGGATATGTTTATATGATATATATGGAGAGCTCTGAACTCTaGCCATTCAACACTTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PFSTQVPLPIGYVYMIYMESSEL*PFNTLE Trigger: CTCCAAAGTGTTGAATGGCCAGAGTTCAGAGCTCTC...CATATATATCATATAAACATATCCTATGGGTAAAGGGACTTGAGTGGAGAATGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055944.11 |
||
| CDS-3UTR CCA 90 bp | CCATTCTCCACTCAAGTCCCTTTACCCATAGGATATGTTTATATGATATATATGGGTCATTCAACACTTTaGAGAGCTCTGAACTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PFSTQVPLPIGYVYMIYMGHSTL*RALNSG Trigger: GCCAGAGTTCAGAGCTCTCCAAAGTGTTGAATGACC...CATATATATCATATAAACATATCCTATGGGTAAAGGGACTTGAGTGGAGAATGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055944.11 |
||
| CDS-3UTR CCA 90 bp | GGAGGTTCTTTGCTTTATAGGTATAGAGTATATTTGGAGAATCTCATGGCATACCTGAGCTCTGAACTCTaGTCATTCAACACTTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GGSLLYRYRVYLENLMAYLSSEL*SFNTLE Trigger: CTCCAAAGTGTTGAATGACCAGAGTTCAGAGCTCAG...GTATGCCATGAGATTCTCCAAATATACTCTATACCTATAAAGCAAAGAACCTCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055944.11 |
||
| CDS-3UTR CCA 90 bp | CCATTCTCCACTCAAGTCCCTTTACCCATAGGATATGTTTATATGATATATATGGAGAGCTCTGAACTCTaGTCATTCAACACTTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PFSTQVPLPIGYVYMIYMESSEL*SFNTLE Trigger: CTCCAAAGTGTTGAATGACCAGAGTTCAGAGCTCTC...CATATATATCATATAAACATATCCTATGGGTAAAGGGACTTGAGTGGAGAATGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055944.11 |
||
| CDS-3UTR CCA 90 bp | CCATTCTCCACTCAAGTCCCTTTACCCATAGGATATGTTTATATGATATATATGAGTGCCTCAGTAGACTaGAAGAGGTCTTTTTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PFSTQVPLPIGYVYMIYMSASVD*KRSFCS Trigger: AGAACAAAAAGACCTCTTCCAGTCTACTGAGGCACT...CATATATATCATATAAACATATCCTATGGGTAAAGGGACTTGAGTGGAGAATGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055944.11 |
||
| CDS-3UTR CAA 90 bp | TGGGGGCGATGCAGAGCTTTGGGAGCCTGCTTGCTTGACGTGCTTATCCTCTGTTCCAGAGCCATGGCATaGCAGATGGGGCAGGATGGA | + |
|
Preference number: 5 (lower is better) Translates to: WGRCRALGACLLDVLILCSRAMA*QMGQDG Trigger: TCCATCCTGCCCCATCTGCAATGCCATGGCTCTGGA...ACAGAGGATAAGCACGTCAAGCAAGCAGGCTCCCAAAGCTCTGCATCGCCCCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
||
| CDS-3UTR CAA 90 bp | TGTTGGGGGCGATGCAGAGCTTTGGGAGCCTGCTTGCTTGACGTGCTTATCCTCCACTGGAGGACAGTGTaGCCAGTGGACAGAGGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: CWGRCRALGACLLDVLILHWRTV*PVDRGA Trigger: AGCTCCTCTGTCCACTGGCAACACTGTCCTCCAGTG...GAGGATAAGCACGTCAAGCAAGCAGGCTCCCAAAGCTCTGCATCGCCCCCAACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
||
| CDS-3UTR CAA 90 bp | GCCTTTGTTGGGGGCGATGCAGAGCTTTGGGAGCCTGCTTGCTTGACGTGCTTAGCATGTTTCTCCAGGTaGGGTTCCTCTGCTCGGACT | + |
|
Preference number: 5 (lower is better) Translates to: AFVGGDAELWEPACLTCLACFSR*GSSART Trigger: AGTCCGAGCAGAGGAACCCAACCTGGAGAAACATGC...TAAGCACGTCAAGCAAGCAGGCTCCCAAAGCTCTGCATCGCCCCCAACAAAGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
||
| CDS-3UTR CAA 90 bp | TGGGGGCGATGCAGAGCTTTGGGAGCCTGCTTGCTTGACGTGCTTATCCTCTGTCTGGAAGAGGTCTTTTaGTTCTCAACCCCCAGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: WGRCRALGACLLDVLILCLEEVF*FSTPSN Trigger: GTTGCTGGGGGTTGAGAACAAAAAGACCTCTTCCAG...ACAGAGGATAAGCACGTCAAGCAAGCAGGCTCCCAAAGCTCTGCATCGCCCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
||
| CDS-3UTR CAA 90 bp | CGATGCAGAGCTTTGGGAGCCTGCTTGCTTGACGTGCTTATCCTCTGTGTAAACTTGGGCTCTCCAGTCTaGGGTTTGGCCCCTGTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: RCRALGACLLDVLILCVNLGSPV*GLAPVS Trigger: TGAGACAGGGGCCAAACCCAAGACTGGAGAGCCCAA...GTTTACACAGAGGATAAGCACGTCAAGCAAGCAGGCTCCCAAAGCTCTGCATCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
||
| CDS CCA 90 bp | CTCGGACTTTGGCAGAACTCTTCTTGGGCTCTCCAGTCTTGGGTTTaGCCCCTGTCTCAGACTTATAGAAGGCAAAGGATTCCTCCGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LGLWQNSSWALQSWV*PLSQTYRRQRIPPV Trigger: GACCGGAGGAATCCTTTGCCTTCTATAAGTCTGAGACAGGGGCCAAACCCAAGACTGGAGAGCCCAAGAAGAGTTCTGCCAAAGTCCGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
||
| CDS CCA 90 bp | TCTCCAGGTTGGGTTCCTCTGCTCGGACTTTGGCAGAACTCTTCTTaGGCTCTCCAGTCTTGGGTTTGGCCCCTGTCTCAGACTTATAGA | + |
|
Preference number: 5 (lower is better) Translates to: SPGWVPLLGLWQNSS*ALQSWVWPLSQTYR Trigger: TCTATAAGTCTGAGACAGGGGCCAAACCCAAGACTGGAGAGCCCAAGAAGAGTTCTGCCAAAGTCCGAGCAGAGGAACCCAACCTGGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
||
| CDS-3UTR CAA 90 bp | GAAATGACGGGTGACAGCCTTTGTTGGGGGCGATGCAGAGCTTTGGGAGCCTGCTGTGACTGCATGAACTaGGGTGGCAATGAAATGTCT | + |
|
Preference number: 5 (lower is better) Translates to: EMTGDSLCWGRCRALGACCDCMN*GGNEMS Trigger: AGACATTTCATTGCCACCCAAGTTCATGCAGTCACA...GCAGGCTCCCAAAGCTCTGCATCGCCCCCAACAAAGGCTGTCACCCGTCATTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
||
| CDS-3UTR CAA 90 bp | GGCCCAGGATTGGTTGTGCAGAAGGGATGTTGCTGGAACTCTGAAGACACTGTACTTCCTCTTCTTTTGTaGGTTTGCAGGCACCCCATG | + |
|
Preference number: 5 (lower is better) Translates to: GPGLVVQKGCCWNSEDTVLPLLL*VCRHPM Trigger: CATGGGGTGCCTGCAAACCAACAAAAGAAGAGGAAG...TACAGTGTCTTCAGAGTTCCAGCAACATCCCTTCTGCACAACCAATCCTGGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
||
| CDS-3UTR CAA 90 bp | GGATTGGTTGTGCAGAAGGGATGTTGCTGGAACTCTGAAGACACTGTAGGTGTCTTGGCAGAACTCTTCTaGGGCTCTCCAGTCTTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: GLVVQKGCCWNSEDTVGVLAELF*GSPVLG Trigger: ACCCAAGACTGGAGAGCCCAAGAAGAGTTCTGCCAA...GACACCTACAGTGTCTTCAGAGTTCCAGCAACATCCCTTCTGCACAACCAATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
||
| CDS-3UTR CAA 90 bp | TCATGGCATACTTGCTTAGAAGTAGAAATGACGGGTGACAGCCTTTGTTGGGGGGCATGTTTCTCCAGGTaGGGTTCCTCTGCTCGGACT | + |
|
Preference number: 5 (lower is better) Translates to: SWHTCLEVEMTGDSLCWGACFSR*GSSART Trigger: AGTCCGAGCAGAGGAACCCAACCTGGAGAAACATGC...CCCCCAACAAAGGCTGTCACCCGTCATTTCTACTTCTAAGCAAGTATGCCATGA 51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
||
| CDS-3UTR CAA 90 bp | TTTGTTGGGGGCGATGCAGAGCTTTGGGAGCCTGCTTGCTTGACGTGCTTATCCATTCTTCGGAAACACTaGGTACAGCTCTTGATAGGT | + |
|
Preference number: 5 (lower is better) Translates to: FVGGDAELWEPACLTCLSILRKH*VQLLIG Trigger: ACCTATCAAGAGCTGTACCAAGTGTTTCCGAAGAAT...GGATAAGCACGTCAAGCAAGCAGGCTCCCAAAGCTCTGCATCGCCCCCAACAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
||
| CDS-3UTR CAA 90 bp | TTTGTTGGGGGCGATGCAGAGCTTTGGGAGCCTGCTTGCTTGACGTGCTTATCCTCACTAGGCTTTTGCTaGATTCTTCGGAAACACTTG | + |
|
Preference number: 5 (lower is better) Translates to: FVGGDAELWEPACLTCLSSLGFC*ILRKHL Trigger: CAAGTGTTTCCGAAGAATCAAGCAAAAGCCTAGTGA...GGATAAGCACGTCAAGCAAGCAGGCTCCCAAAGCTCTGCATCGCCCCCAACAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
||
| CDS-3UTR CAA 90 bp | TGTTGGGGGCGATGCAGAGCTTTGGGAGCCTGCTTGCTTGACGTGCTTATCCTCTCTATCACTAGGCTTTaGCTTGATTCTTCGGAAACA | + |
|
Preference number: 5 (lower is better) Translates to: CWGRCRALGACLLDVLILSITRL*LDSSET Trigger: TGTTTCCGAAGAATCAAGCAAAAGCCTAGTGATAGA...GAGGATAAGCACGTCAAGCAAGCAGGCTCCCAAAGCTCTGCATCGCCCCCAACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
||
| CDS-3UTR CAA 90 bp | ACTTGCTTAGAAGTAGAAATGACGGGTGACAGCCTTTGTTGGGGGCGATGCAGATGGCCATTCAACACTTaGGAGAGCTCTGAACTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: TCLEVEMTGDSLCWGRCRWPFNT*ESSELW Trigger: CCAGAGTTCAGAGCTCTCCAAAGTGTTGAATGGCCA...TCTGCATCGCCCCCAACAAAGGCTGTCACCCGTCATTTCTACTTCTAAGCAAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
||
| CDS-3UTR CAA 90 bp | CGTGCTTATCCTCTGTGTAAACCAGGACCTTCTGAGAGGAGAGCTGACATTGGTTCTTCTTTTGTTGGTTaGCAGGCACCCCATGCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: RAYPLCKPGPSERRADIGSSFVG*QAPHAR Trigger: ACGAGCATGGGGTGCCTGCAAACCAACAAAAGAAGA...ACCAATGTCAGCTCTCCTCTCAGAAGGTCCTGGTTTACACAGAGGATAAGCACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
||
| CDS-3UTR CAA 90 bp | TCATGGCATACTTGCTTAGAAGTAGAAATGACGGGTGACAGCCTTTGTTGGGGGTGGCCATTCAACACTTaGGAGAGCTCTGAACTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SWHTCLEVEMTGDSLCWGWPFNT*ESSELW Trigger: CCAGAGTTCAGAGCTCTCCAAAGTGTTGAATGGCCA...CCCCCAACAAAGGCTGTCACCCGTCATTTCTACTTCTAAGCAAGTATGCCATGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
||
| CDS-3UTR CAA 90 bp | GGCCCAGGATTGGTTGTGCAGAAGGGATGTTGCTGGAACTCTGAAGACACTGTATGTGACTGCATGAACTaGGGTGGCAATGAAATGTCT | + |
|
Preference number: 5 (lower is better) Translates to: GPGLVVQKGCCWNSEDTVCDCMN*GGNEMS Trigger: AGACATTTCATTGCCACCCAAGTTCATGCAGTCACA...TACAGTGTCTTCAGAGTTCCAGCAACATCCCTTCTGCACAACCAATCCTGGGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
||
| CDS-3UTR CAA 90 bp | GGATTGGTTGTGCAGAAGGGATGTTGCTGGAACTCTGAAGACACTGTAGGTGTCTTTCTTCCTCTTCTTTaGTTGGTTTGCAGGCACCCC | + |
|
Preference number: 5 (lower is better) Translates to: GLVVQKGCCWNSEDTVGVFLPLL*LVCRHP Trigger: GGGGTGCCTGCAAACCAACAAAAGAAGAGGAAGAAA...GACACCTACAGTGTCTTCAGAGTTCCAGCAACATCCCTTCTGCACAACCAATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
||
| CDS-3UTR CAA 90 bp | TGTTGGGGGCGATGCAGAGCTTTGGGAGCCTGCTTGCTTGACGTGCTTATCCTCGAAAAGAACGTCATCTaGTTTTCCATTTCAGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: CWGRCRALGACLLDVLILEKNVI*FSISAS Trigger: AGAAGCTGAAATGGAAAACAAGATGACGTTCTTTTC...GAGGATAAGCACGTCAAGCAAGCAGGCTCCCAAAGCTCTGCATCGCCCCCAACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
||
| CDS CCA 90 bp | CATTCAACACTTTGGAGAGCTCTGAACTCTGGCCATTCAACACTTTaGAGAGCTCTGAACTCTGGCCATTCAACACTTTGGAGAGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: HSTLWRALNSGHSTL*RALNSGHSTLWRAL Trigger: CAGAGCTCTCCAAAGTGTTGAATGGCCAGAGTTCAGAGCTCTCCAAAGTGTTGAATGGCCAGAGTTCAGAGCTCTCCAAAGTGTTGAATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
||
| CDS-3UTR CAA 90 bp | ACCCATCAAAATGAAAGCAGATTTAAGCACCCATACCACACAGAGAACTTTTCCTCCAGAGCCATGGCATaGCAGATGGGGCAGGATGGA | + |
|
Preference number: 5 (lower is better) Translates to: THQNESRFKHPYHTENFSSRAMA*QMGQDG Trigger: TCCATCCTGCCCCATCTGCAATGCCATGGCTCTGGA...GGAAAAGTTCTCTGTGTGGTATGGGTGCTTAAATCTGCTTTCATTTTGATGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000055944.11 |
||
| CDS-3UTR CAA 90 bp | TCATGGCATACTTGCTTAGAAGTAGAAATGACGGGTGACAGCCTTTGTTGGGGGTGGTCATTCAACACTTaGGAGAGCTCTGAACTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SWHTCLEVEMTGDSLCWGWSFNT*ESSELW Trigger: CCAGAGTTCAGAGCTCTCCAAAGTGTTGAATGACCA...CCCCCAACAAAGGCTGTCACCCGTCATTTCTACTTCTAAGCAAGTATGCCATGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
||
| CDS-3UTR CAA 90 bp | TTTGTTGGGGGCGATGCAGAGCTTTGGGAGCCTGCTTGCTTGACGTGCTTATCCTTCGAGACAAGTTTCTaGGTTTTCTTCCTCTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: FVGGDAELWEPACLTCLSFETSF*VFFLFF Trigger: AAAGAAGAGGAAGAAAACCAAGAAACTTGTCTCGAA...GGATAAGCACGTCAAGCAAGCAGGCTCCCAAAGCTCTGCATCGCCCCCAACAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
||
| CDS TCA 90 bp | AAGGATTCCTCCGGTCTGTCGCATTTCACTTCAGGGTTAACCCAGTaGGAAAAGAACGTCATCTTGTTTTCCATTTCAGCTTCTGAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: KDSSGLSHFTSGLTQ*EKNVILFSISASEG Trigger: GCCCTCAGAAGCTGAAATGGAAAACAAGATGACGTTCTTTTCTCACTGGGTTAACCCTGAAGTGAAATGCGACAGACCGGAGGAATCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
||
| CDS CCA 90 bp | CATTCAACACTTTGGAGAGCTCTGAACTCTGGCCATTCAACACTTTaGAGAGCTCTGAACTCTGGTCATTCAACACTTTGGGTGGAGACA | + |
|
Preference number: 5 (lower is better) Translates to: HSTLWRALNSGHSTL*RALNSGHSTLWVET Trigger: TGTCTCCACCCAAAGTGTTGAATGACCAGAGTTCAGAGCTCTCCAAAGTGTTGAATGGCCAGAGTTCAGAGCTCTCCAAAGTGTTGAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
||
| CDS-3UTR CAA 90 bp | GGATTGGTTGTGCAGAAGGGATGTTGCTGGAACTCTGAAGACACTGTAGGTGTCTCACTAGGCTTTTGCTaGATTCTTCGGAAACACTTG | + |
|
Preference number: 5 (lower is better) Translates to: GLVVQKGCCWNSEDTVGVSLGFC*ILRKHL Trigger: CAAGTGTTTCCGAAGAATCAAGCAAAAGCCTAGTGA...GACACCTACAGTGTCTTCAGAGTTCCAGCAACATCCCTTCTGCACAACCAATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
||
| CDS-3UTR CAA 90 bp | GGCCCAGGATTGGTTGTGCAGAAGGGATGTTGCTGGAACTCTGAAGACACTGTATTCTCAGTTTCTTCCTaGGTTGTCCTCTTCTTAACT | + |
|
Preference number: 5 (lower is better) Translates to: GPGLVVQKGCCWNSEDTVFSVSS*VVLFLT Trigger: AGTTAAGAAGAGGACAACCAAGGAAGAAACTGAGAA...TACAGTGTCTTCAGAGTTCCAGCAACATCCCTTCTGCACAACCAATCCTGGGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
||
| CDS-3UTR CAA 90 bp | GCAGATTTAAGCACCCATACCACACAGAGAACTTTTCCTACATGTGGCACTGAACTGGAAGAGGTCTTTTaGTTCTCAACCCCCAGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: ADLSTHTTQRTFPTCGTELEEVF*FSTPSN Trigger: GTTGCTGGGGGTTGAGAACAAAAAGACCTCTTCCAG...TTCAGTGCCACATGTAGGAAAAGTTCTCTGTGTGGTATGGGTGCTTAAATCTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000055944.11 |
||
| CDS CCA 90 bp | GGCAATGAAATGTCTTTGGAGTGTTGGGAACTGAGCTCTGAACTCTaGTCATTCAACACTTTGGAGAGCTCTGAACTCTGGTCATTCAAC | + |
|
Preference number: 5 (lower is better) Translates to: GNEMSLECWELSSEL*SFNTLESSELWSFN Trigger: GTTGAATGACCAGAGTTCAGAGCTCTCCAAAGTGTTGAATGACCAGAGTTCAGAGCTCAGTTCCCAACACTCCAAAGACATTTCATTGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
||
| CDS-3UTR CAA 90 bp | GGAGGTTCTTTGCTTTATAGGTATAGAGTATATTTGGAGAATCTCATGGCATACCACTGGAGGACAGTGTaGCCAGTGGACAGAGGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: GGSLLYRYRVYLENLMAYHWRTV*PVDRGA Trigger: AGCTCCTCTGTCCACTGGCAACACTGTCCTCCAGTG...GTATGCCATGAGATTCTCCAAATATACTCTATACCTATAAAGCAAAGAACCTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055944.11 |
||
| CDS-3UTR CAA 90 bp | ACTTGCTTAGAAGTAGAAATGACGGGTGACAGCCTTTGTTGGGGGCGATGCAGATTCGAGACAAGTTTCTaGGTTTTCTTCCTCTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: TCLEVEMTGDSLCWGRCRFETSF*VFFLFF Trigger: AAAGAAGAGGAAGAAAACCAAGAAACTTGTCTCGAA...TCTGCATCGCCCCCAACAAAGGCTGTCACCCGTCATTTCTACTTCTAAGCAAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
||
| CDS-3UTR CAA 90 bp | CCATTCTCCACTCAAGTCCCTTTACCCATAGGATATGTTTATATGATATATATGTTGGGCTCTCCAGTCTaGGGTTTGGCCCCTGTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: PFSTQVPLPIGYVYMIYMLGSPV*GLAPVS Trigger: TGAGACAGGGGCCAAACCCAAGACTGGAGAGCCCAA...CATATATATCATATAAACATATCCTATGGGTAAAGGGACTTGAGTGGAGAATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055944.11 |
||
| CDS GCA 90 bp | TTGGTTGTCCTCTTCTTAACTCTTAGCGTTCTATCACTAGGCTTTTaGTTGATTCTTCGGAAACACTTGGTACAGCTCTTGATAGGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: LVVLFLTLSVLSLGF*LILRKHLVQLLIGP Trigger: GGGACCTATCAAGAGCTGTACCAAGTGTTTCCGAAGAATCAAGCAAAAGCCTAGTGATAGAACGCTAAGAGTTAAGAAGAGGACAACCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
||
| CDS CCA 90 bp | AAACACTTGGTACAGCTCTTGATAGGTCCCAACCTTAATCCTCGGTaGCTCCTTCTCACATGCCAAATAATCAATGCAATAATGAAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: KHLVQLLIGPNLNPR*LLLTCQIINAIMKR Trigger: TCTCTTCATTATTGCATTGATTATTTGGCATGTGAGAAGGAGCCACCGAGGATTAAGGTTGGGACCTATCAAGAGCTGTACCAAGTGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
||
| CDS-3UTR CAA 90 bp | CCATTCTCCACTCAAGTCCCTTTACCCATAGGATATGTTTATATGATATATATGTTGGCAGAACTCTTCTaGGGCTCTCCAGTCTTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: PFSTQVPLPIGYVYMIYMLAELF*GSPVLG Trigger: ACCCAAGACTGGAGAGCCCAAGAAGAGTTCTGCCAA...CATATATATCATATAAACATATCCTATGGGTAAAGGGACTTGAGTGGAGAATGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055944.11 |
||
| CDS-3UTR CAA 90 bp | CCCATCAAAATGAAAGCAGATTTAAGCACCCATACCACACAGAGAACTTTTCCTATTCTTCGGAAACACTaGGTACAGCTCTTGATAGGT | + |
|
Preference number: 5 (lower is better) Translates to: PIKMKADLSTHTTQRTFPILRKH*VQLLIG Trigger: ACCTATCAAGAGCTGTACCAAGTGTTTCCGAAGAAT...AGGAAAAGTTCTCTGTGTGGTATGGGTGCTTAAATCTGCTTTCATTTTGATGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055944.11 |
||
| CDS-3UTR CAA 90 bp | AATGCAGGAGGTTCTTTGCTTTATAGGTATAGAGTATATTTGGAGAATCTCATGTCTTCTTTTGTTGGTTaGCAGGCACCCCATGCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: NAGGSLLYRYRVYLENLMSSFVG*QAPHAR Trigger: ACGAGCATGGGGTGCCTGCAAACCAACAAAAGAAGA...CATGAGATTCTCCAAATATACTCTATACCTATAAAGCAAAGAACCTCCTGCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055944.11 |
||
| CDS-3UTR CAA 90 bp | CCATTCTCCACTCAAGTCCCTTTACCCATAGGATATGTTTATATGATATATATGCTTCCTCTTCTTTTGTaGGTTTGCAGGCACCCCATG | + |
|
Preference number: 5 (lower is better) Translates to: PFSTQVPLPIGYVYMIYMLPLLL*VCRHPM Trigger: CATGGGGTGCCTGCAAACCAACAAAAGAAGAGGAAG...CATATATATCATATAAACATATCCTATGGGTAAAGGGACTTGAGTGGAGAATGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055944.11 |
||
| CDS-3UTR CAA 90 bp | AAGATTTATTTCTATCTTCGGTGGACCTTAAACAAGAGGCCTCCATTCTCCACTTTCTCAGTTTCTTCCTaGGTTGTCCTCTTCTTAACT | + |
|
Preference number: 5 (lower is better) Translates to: KIYFYLRWTLNKRPPFSTFSVSS*VVLFLT Trigger: AGTTAAGAAGAGGACAACCAAGGAAGAAACTGAGAA...AGTGGAGAATGGAGGCCTCTTGTTTAAGGTCCACCGAAGATAGAAATAAATCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055944.11 |
||
| CDS-3UTR CAA 90 bp | CCATTCTCCACTCAAGTCCCTTTACCCATAGGATATGTTTATATGATATATATGTTTCTTCCTCTTCTTTaGTTGGTTTGCAGGCACCCC | + |
|
Preference number: 5 (lower is better) Translates to: PFSTQVPLPIGYVYMIYMFLPLL*LVCRHP Trigger: GGGGTGCCTGCAAACCAACAAAAGAAGAGGAAGAAA...CATATATATCATATAAACATATCCTATGGGTAAAGGGACTTGAGTGGAGAATGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055944.11 |
||
| CDS CCA 72 bp | TGGGTTCCTCTGCTCGGACTTTGGCAGAACTCTTCTTaGGCTCTCCAGTCTTGGGTTTGGCCCCTGTCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: WVPLLGLWQNSS*ALQSWVWPLSQ Trigger: CTGAGACAGGGGCCAAACCCAAGACTGGAGAGCCCAAGAAGAGTTCTGCCAAAGTCCGAGCAGAGGAACCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
||
| CDS CAA 72 bp | TTGGGTTCCTCTGCTCGGACTTTGGCAGAACTCTTCTaGGGCTCTCCAGTCTTGGGTTTGGCCCCTGTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: LGSSARTLAELF*GSPVLGLAPVS Trigger: TGAGACAGGGGCCAAACCCAAGACTGGAGAGCCCAAGAAGAGTTCTGCCAAAGTCCGAGCAGAGGAACCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
||
| CDS CCA 72 bp | CATGTTTCTCCAGGTTGGGTTCCTCTGCTCGGACTTTaGCAGAACTCTTCTTGGGCTCTCCAGTCTTGGGTT | + |
|
Preference number: 6 (lower is better) Translates to: HVSPGWVPLLGL*QNSSWALQSWV Trigger: AACCCAAGACTGGAGAGCCCAAGAAGAGTTCTGCCAAAGTCCGAGCAGAGGAACCCAACCTGGAGAAACATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
||
| CDS CAA 90 bp | GCATGGAGAGGCTTGGCTTTGAGATCTTTTGCATGTTTCTCCAGGTaGGGTTCCTCTGCTCGGACTTTGGCAGAACTCTTCTTGGGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: AWRGLALRSFACFSR*GSSARTLAELFLGS Trigger: AGAGCCCAAGAAGAGTTCTGCCAAAGTCCGAGCAGAGGAACCCAACCTGGAGAAACATGCAAAAGATCTCAAAGCCAAGCCTCTCCATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
||
| CDS GCA 72 bp | CTTTGGGTGGAGACAATGCCTCCAGACAAGAAAAGCTaGGGGAGTGCCTCAGTAGACTGGAAGAGGTCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: LWVETMPPDKKS*GSASVDWKRSF Trigger: AAAAGACCTCTTCCAGTCTACTGAGGCACTCCCGCAGCTTTTCTTGTCTGGAGGCATTGTCTCCACCCAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
||
| CDS GCA 72 bp | GAGATCTTTTGCATGTTTCTCCAGGTTGGGTTCCTCTaGTCGGACTTTGGCAGAACTCTTCTTGGGCTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: EIFCMFLQVGFL*SDFGRTLLGLS Trigger: GGAGAGCCCAAGAAGAGTTCTGCCAAAGTCCGAGCAGAGGAACCCAACCTGGAGAAACATGCAAAAGATCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
||
| CDS GCA 72 bp | CCTCTTAGCATGGAGAGGCTTGGCTTTGAGATCTTTTaGATGTTTCTCCAGGTTGGGTTCCTCTGCTCGGAC | + |
|
Preference number: 6 (lower is better) Translates to: PLSMERLGFEIF*MFLQVGFLCSD Trigger: GTCCGAGCAGAGGAACCCAACCTGGAGAAACATGCAAAAGATCTCAAAGCCAAGCCTCTCCATGCTAAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
||
| CDS GCA 72 bp | GGAGACAATGCCTCCAGACAAGAAAAGCTGCGGGAGTaGCTCAGTAGACTGGAAGAGGTCTTTTTGTTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: GDNASRQEKLRE*LSRLEEVFLFS Trigger: TGAGAACAAAAAGACCTCTTCCAGTCTACTGAGGCACTCCCGCAGCTTTTCTTGTCTGGAGGCATTGTCTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
||
| CDS CCA 72 bp | CTCTGGCCATTCAACACTTTGGAGAGCTCTGAACTCTaGTCATTCAACACTTTGGGTGGAGACAATGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: LWPFNTLESSEL*SFNTLGGDNAS Trigger: GGAGGCATTGTCTCCACCCAAAGTGTTGAATGACCAGAGTTCAGAGCTCTCCAAAGTGTTGAATGGCCAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
||
| CDS CCA 72 bp | CTCTGGCCATTCAACACTTTGGAGAGCTCTGAACTCTaGCCATTCAACACTTTGGAGAGCTCTGAACTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LWPFNTLESSEL*PFNTLESSELW Trigger: CCAGAGTTCAGAGCTCTCCAAAGTGTTGAATGGCCAGAGTTCAGAGCTCTCCAAAGTGTTGAATGGCCAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
||
| CDS CCA 72 bp | TGGCAGAACTCTTCTTGGGCTCTCCAGTCTTGGGTTTaGCCCCTGTCTCAGACTTATAGAAGGCAAAGGATT | + |
|
Preference number: 6 (lower is better) Translates to: WQNSSWALQSWV*PLSQTYRRQRI Trigger: AATCCTTTGCCTTCTATAAGTCTGAGACAGGGGCCAAACCCAAGACTGGAGAGCCCAAGAAGAGTTCTGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
||
| CDS CAA 72 bp | GGCTTGGCTTTGAGATCTTTTGCATGTTTCTCCAGGTaGGGTTCCTCTGCTCGGACTTTGGCAGAACTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: GLALRSFACFSR*GSSARTLAELF Trigger: GAAGAGTTCTGCCAAAGTCCGAGCAGAGGAACCCAACCTGGAGAAACATGCAAAAGATCTCAAAGCCAAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
||
| CDS CCA 72 bp | CTTTGGAGAGCTCTGAACTCTGGCCATTCAACACTTTaGAGAGCTCTGAACTCTGGCCATTCAACACTTTGG | + |
|
Preference number: 6 (lower is better) Translates to: LWRALNSGHSTL*RALNSGHSTLW Trigger: CCAAAGTGTTGAATGGCCAGAGTTCAGAGCTCTCCAAAGTGTTGAATGGCCAGAGTTCAGAGCTCTCCAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
||
| CDS CCA 72 bp | CTCTGGTCATTCAACACTTTGGAGAGCTCTGAACTCTaGCCATTCAACACTTTGGAGAGCTCTGAACTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LWSFNTLESSEL*PFNTLESSELW Trigger: CCAGAGTTCAGAGCTCTCCAAAGTGTTGAATGGCCAGAGTTCAGAGCTCTCCAAAGTGTTGAATGACCAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
||
| CDS GCA 72 bp | TTCTTCCTCTTCTTTTGTTGGTTTGCAGGCACCCCATaGTCGTCCATACTTGAAGATGACAGACCGCTTACA | + |
|
Preference number: 6 (lower is better) Translates to: FFLFFCWFAGTP*SSILEDDRPLT Trigger: TGTAAGCGGTCTGTCATCTTCAAGTATGGACGAGCATGGGGTGCCTGCAAACCAACAAAAGAAGAGGAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
||
| CDS CCA 72 bp | CTTTGGAGAGCTCTGAACTCTGGCCATTCAACACTTTaGAGAGCTCTGAACTCTGGTCATTCAACACTTTGG | + |
|
Preference number: 6 (lower is better) Translates to: LWRALNSGHSTL*RALNSGHSTLW Trigger: CCAAAGTGTTGAATGACCAGAGTTCAGAGCTCTCCAAAGTGTTGAATGGCCAGAGTTCAGAGCTCTCCAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
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| CDS CAA 72 bp | ACTTTGGAGAGCTCTGAACTCTGGCCATTCAACACTTaGGAGAGCTCTGAACTCTGGCCATTCAACACTTTG | + |
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Preference number: 6 (lower is better) Translates to: TLESSELWPFNT*ESSELWPFNTL Trigger: CAAAGTGTTGAATGGCCAGAGTTCAGAGCTCTCCAAAGTGTTGAATGGCCAGAGTTCAGAGCTCTCCAAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
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| CDS CAA 72 bp | ACTTTGGAGAGCTCTGAACTCTGGCCATTCAACACTTaGGAGAGCTCTGAACTCTGGTCATTCAACACTTTG | + |
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Preference number: 6 (lower is better) Translates to: TLESSELWPFNT*ESSELWSFNTL Trigger: CAAAGTGTTGAATGACCAGAGTTCAGAGCTCTCCAAAGTGTTGAATGGCCAGAGTTCAGAGCTCTCCAAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
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| CDS CAA 72 bp | ACTTTGGAGAGCTCTGAACTCTGGTCATTCAACACTTaGGAGAGCTCTGAACTCTGGCCATTCAACACTTTG | + |
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Preference number: 6 (lower is better) Translates to: TLESSELWSFNT*ESSELWPFNTL Trigger: CAAAGTGTTGAATGGCCAGAGTTCAGAGCTCTCCAAAGTGTTGAATGACCAGAGTTCAGAGCTCTCCAAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
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| CDS TCA 72 bp | TCCGGTCTGTCGCATTTCACTTCAGGGTTAACCCAGTaGGAAAAGAACGTCATCTTGTTTTCCATTTCAGCT | + |
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Preference number: 6 (lower is better) Translates to: SGLSHFTSGLTQ*EKNVILFSISA Trigger: AGCTGAAATGGAAAACAAGATGACGTTCTTTTCTCACTGGGTTAACCCTGAAGTGAAATGCGACAGACCGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
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| CDS CCA 72 bp | GTCATCTTGTTTTCCATTTCAGCTTCTGAGGGCGCTTaGTTCTTCGAGACAAGTTTCTTGGTTTTCTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: VILFSISASEGA*FFETSFLVFFL Trigger: GAGGAAGAAAACCAAGAAACTTGTCTCGAAGAACCAAGCGCCCTCAGAAGCTGAAATGGAAAACAAGATGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055944.11 |
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| CDS CCA 72 bp | ATCTTGTTTTCCATTTCAGCTTCTGAGGGCGCTGCTTaGTTCTTCGAGACAAGTTTCTTGGTTTTCTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: ILFSISASEGAA*FFETSFLVFFL Trigger: GAGGAAGAAAACCAAGAAACTTGTCTCGAAGAACCAAGCAGCGCCCTCAGAAGCTGAAATGGAAAACAAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107978.2 |
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| CDS CAA 90 bp | GTTGTCCTCTTCTTAACTCTTAGCGTTCTATCACTAGGCTTTTGCTaGATTCTTCGGAAACACTTGGTACAGCTCTTGATAGGTCCCAAC | + |
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Preference number: 6 (lower is better) Translates to: VVLFLTLSVLSLGFC*ILRKHLVQLLIGPN Trigger: GTTGGGACCTATCAAGAGCTGTACCAAGTGTTTCCGAAGAATCAAGCAAAAGCCTAGTGATAGAACGCTAAGAGTTAAGAAGAGGACAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
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| CDS GCA 72 bp | CTCTTCTTAACTCTTAGCGTTCTATCACTAGGCTTTTaGTTGATTCTTCGGAAACACTTGGTACAGCTCTTG | + |
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Preference number: 6 (lower is better) Translates to: LFLTLSVLSLGF*LILRKHLVQLL Trigger: CAAGAGCTGTACCAAGTGTTTCCGAAGAATCAAGCAAAAGCCTAGTGATAGAACGCTAAGAGTTAAGAAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
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| CDS TCA 72 bp | ACAGAGTCAATTTCTGATCTGTTGATTGTGACTGCATaGACTTGGGTGGCAATGAAATGTCTTTGGAGTGTT | + |
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Preference number: 6 (lower is better) Translates to: TESISDLLIVTA*TWVAMKCLWSV Trigger: AACACTCCAAAGACATTTCATTGCCACCCAAGTTCATGCAGTCACAATCAACAGATCAGAAATTGACTCTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
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| CDS CAA 72 bp | TTCTTAACTCTTAGCGTTCTATCACTAGGCTTTTGCTaGATTCTTCGGAAACACTTGGTACAGCTCTTGATA | + |
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Preference number: 6 (lower is better) Translates to: FLTLSVLSLGFC*ILRKHLVQLLI Trigger: TATCAAGAGCTGTACCAAGTGTTTCCGAAGAATCAAGCAAAAGCCTAGTGATAGAACGCTAAGAGTTAAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055944.11 ENSMUST00000107978.2 |
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