Pregenerated sensors for FAM205A3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000093996Ensembl transcript IDs: ENSMUST00000178192.3
Found 15 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 72 bp | CCTACTGCCACCGCAGGGCAGGGACTGCAGGTCTGTTaGGGAGAGCAGCATATTTATGGAGCGCTGGATCCT | + |
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Preference number: 6 (lower is better) Translates to: PTATAGQGLQVC*GEQHIYGALDP Trigger: AGGATCCAGCGCTCCATAAATATGCTGCTCTCCTCAACAGACCTGCAGTCCCTGCCCTGCGGTGGCAGTAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178192.3 |
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| CDS TCA 72 bp | GTGCACTTGGGCCTCCATCATATTCCTGTGGACTTGTaGGCCCTGCCGGGCAGATCTATGGGGCACTGCTCT | + |
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Preference number: 6 (lower is better) Translates to: VHLGLHHIPVDL*ALPGRSMGHCS Trigger: AGAGCAGTGCCCCATAGATCTGCCCGGCAGGGCTCACAAGTCCACAGGAATATGATGGAGGCCCAAGTGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178192.3 |
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| CDS TCA 72 bp | AGCAGTGTGCTTTCCCGTGGACTCCCGAGAGGCTCCTaGACAGATTCACTCTCCAAGTCTGTTGCAGTTGGC | + |
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Preference number: 6 (lower is better) Translates to: SSVLSRGLPRGS*TDSLSKSVAVG Trigger: GCCAACTGCAACAGACTTGGAGAGTGAATCTGTTCAGGAGCCTCTCGGGAGTCCACGGGAAAGCACACTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178192.3 |
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| CDS TCA 72 bp | AGGCAGACCTTATCTGGATCTGGGGCTACAGGAACGTaGCATAAGGTGGGCGGTCCCTGTAGCAGTGTGCTT | + |
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Preference number: 6 (lower is better) Translates to: RQTLSGSGATGT*HKVGGPCSSVL Trigger: AAGCACACTGCTACAGGGACCGCCCACCTTATGTCACGTTCCTGTAGCCCCAGATCCAGATAAGGTCTGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178192.3 |
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| CDS TCA 72 bp | ACCAGTGTCTCAGAGGCCATGGGCATGTCTGCCAGATaGAATTCCTGTCCTATCTGGAGGGGATCAGTCCAG | + |
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Preference number: 6 (lower is better) Translates to: TSVSEAMGMSAR*NSCPIWRGSVQ Trigger: CTGGACTGATCCCCTCCAGATAGGACAGGAATTTCATCTGGCAGACATGCCCATGGCCTCTGAGACACTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178192.3 |
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| CDS TCA 72 bp | GGCTTGGGGTCGCCTACAGTGTTCAATGAAAACACCTaGAAAGGCCTGAGCCTCCTGGTCAAGGTCCATTGG | + |
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Preference number: 6 (lower is better) Translates to: GLGSPTVFNENT*KGLSLLVKVHW Trigger: CCAATGGACCTTGACCAGGAGGCTCAGGCCTTTTCAGGTGTTTTCATTGAACACTGTAGGCGACCCCAAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178192.3 |
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| CDS TCA 72 bp | CCTCAGACAGGGCTTGGGGTCGCCTACAGTGTTCAATaGAAACACCTGAAAAGGCCTGAGCCTCCTGGTCAA | + |
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Preference number: 6 (lower is better) Translates to: PQTGLGVAYSVQ*KHLKRPEPPGQ Trigger: TTGACCAGGAGGCTCAGGCCTTTTCAGGTGTTTTCATTGAACACTGTAGGCGACCCCAAGCCCTGTCTGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178192.3 |
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| CDS TCA 72 bp | CTCTCTGGAGGCACCTTCTCTGTCCTTCCATGCCCCTaGGCTCCATGCTGGAACTCTTCTGCAATGTTTGCA | + |
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Preference number: 6 (lower is better) Translates to: LSGGTFSVLPCP*APCWNSSAMFA Trigger: TGCAAACATTGCAGAAGAGTTCCAGCATGGAGCTCAGGGGCATGGAAGGACAGAGAAGGTGCCTCCAGAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178192.3 |
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| CDS TCA 72 bp | TCTTCTCCTGCTCTCCATCCTGGCGTGTCTTTAGACTaGCCAGGGAAAATCCAAGACCTGCGTCCCCTTCTC | + |
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Preference number: 6 (lower is better) Translates to: SSPALHPGVSLD*PGKIQDLRPLL Trigger: GAGAAGGGGACGCAGGTCTTGGATTTTCCCTGGTCAGTCTAAAGACACGCCAGGATGGAGAGCAGGAGAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178192.3 |
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| CDS TCA 72 bp | GTCCTCGCAGGTTCTGGGACAATGGATTCCTTGCTTTaGCTGTCTTCCATGTCCTGCTCAGAGTCTGTCTCC | + |
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Preference number: 6 (lower is better) Translates to: VLAGSGTMDSLL*LSSMSCSESVS Trigger: GGAGACAGACTCTGAGCAGGACATGGAAGACAGTCAAAGCAAGGAATCCATTGTCCCAGAACCTGCGAGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178192.3 |
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| CDS TCA 72 bp | GATTTTTCTCTTGCCTGCCACTGTAGGGACATAGCCTaGCTTACTCTTGCCTGGGCTTTGGGACTCAGTGCT | + |
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Preference number: 6 (lower is better) Translates to: DFSLACHCRDIA*LTLAWALGLSA Trigger: AGCACTGAGTCCCAAAGCCCAGGCAAGAGTAAGTCAGGCTATGTCCCTACAGTGGCAGGCAAGAGAAAAATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178192.3 |
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| CDS TCA 72 bp | CGCCTACAGTGTTCAATGAAAACACCTGAAAAGGCCTaGGCCTCCTGGTCAAGGTCCATTGGTTTCCAGGAA | + |
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Preference number: 6 (lower is better) Translates to: RLQCSMKTPEKA*ASWSRSIGFQE Trigger: TTCCTGGAAACCAATGGACCTTGACCAGGAGGCTCAGGCCTTTTCAGGTGTTTTCATTGAACACTGTAGGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178192.3 |
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| CDS TCA 72 bp | ATAGGATGTGTGACAGTAAGCTGTGGGGTCAGGGTCTaGAAAGGAATCTGTGAGTTCAATGCCTCATGGTCT | + |
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Preference number: 6 (lower is better) Translates to: IGCVTVSCGVRV*KGICEFNASWS Trigger: AGACCATGAGGCATTGAACTCACAGATTCCTTTTCAGACCCTGACCCCACAGCTTACTGTCACACATCCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178192.3 |
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| CDS TCA 72 bp | GAGCCTTCCTTTTCAGGTAGAAACTCACTCTCTCCATaGTCTCTGTGTCTAATGAGTAGGGTCTATTCAGGA | + |
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Preference number: 6 (lower is better) Translates to: EPSFSGRNSLSP*SLCLMSRVYSG Trigger: TCCTGAATAGACCCTACTCATTAGACACAGAGATCATGGAGAGAGTGAGTTTCTACCTGAAAAGGAAGGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178192.3 |
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| CDS TCA 72 bp | ATGAACACAGTCTTGAGAGCTAGTATTCAGGATAAATaGAACTGGTTGGTTATGTTCTGGCGGGAGATACAC | + |
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Preference number: 6 (lower is better) Translates to: MNTVLRASIQDK*NWLVMFWREIH Trigger: GTGTATCTCCCGCCAGAACATAACCAACCAGTTTCATTTATCCTGAATACTAGCTCTCAAGACTGTGTTCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178192.3 |
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