RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAM205A1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000078721

Ensembl transcript IDs: ENSMUST00000107979.2

Found 34 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp AGCCTCTGGAAGGCGGCTGGGTCTCGTGTAGGGAGAGGCTGGCGTTaGATGCCCTGGTGGGACGTGACCTGGACCAGGTTGGCCCTGAGA +
Preference number: 5 (lower is better)
Translates to: SLWKAAGSRVGRGWR*MPWWDVTWTRLALR
Trigger: TCTCAGGGCCAACCTGGTCCAGGTCACGTCCCACCAGGGCATGCAACGCCAGCCTCTCCCTACACGAGACCCAGCCGCCTTCCAGAGGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107979.2
CDS TCA 90 bp CCTGGAGAAACCAGTGTCTCAGAGGCCATGGGCATGTCTGCCAGATaGAATTCCTGTCCTACCTGGAGGGGATCAGTCCAGCAAAGCGGG +
Preference number: 5 (lower is better)
Translates to: PGETSVSEAMGMSAR*NSCPTWRGSVQQSG
Trigger: CCCGCTTTGCTGGACTGATCCCCTCCAGGTAGGACAGGAATTTCATCTGGCAGACATGCCCATGGCCTCTGAGACACTGGTTTCTCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107979.2
CDS GCA 90 bp GAATGTTTGGGAATAAAGTCCCTGCTGCCAAATCCCCAGGAATTCTaGCTTTCCAGGCGCTTTGGACACAGGCCGGGACCTTGCCCTCCC +
Preference number: 5 (lower is better)
Translates to: ECLGIKSLLPNPQEF*LSRRFGHRPGPCPP
Trigger: GGGAGGGCAAGGTCCCGGCCTGTGTCCAAAGCGCCTGGAAAGGCAGAATTCCTGGGGATTTGGCAGCAGGGACTTTATTCCCAAACATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107979.2
CDS CCA 90 bp CCACTGGCTCCTCAAGCCCTGGAGAAACCAGTGTCTCAGAGGCCATaGGCATGTCTGCCAGATGAAATTCCTGTCCTACCTGGAGGGGAT +
Preference number: 5 (lower is better)
Translates to: PLAPQALEKPVSQRP*ACLPDEIPVLPGGD
Trigger: ATCCCCTCCAGGTAGGACAGGAATTTCATCTGGCAGACATGCCCATGGCCTCTGAGACACTGGTTTCTCCAGGGCTTGAGGAGCCAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107979.2
CDS GCA 90 bp CTCAAGCCCTGGAGAAACCAGTGTCTCAGAGGCCATGGGCATGTCTaGCAGATGAAATTCCTGTCCTACCTGGAGGGGATCAGTCCAGCA +
Preference number: 5 (lower is better)
Translates to: LKPWRNQCLRGHGHV*QMKFLSYLEGISPA
Trigger: TGCTGGACTGATCCCCTCCAGGTAGGACAGGAATTTCATCTGGCAGACATGCCCATGGCCTCTGAGACACTGGTTTCTCCAGGGCTTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107979.2
CDS GCA 90 bp TGTAGTGAGGAGCCCTGGAGTTGTCTGTGCAGGAGCCTCTTCTCCTaGTCTCCATCCTGGCGTGTCTTTAGACTGACCAGGGAAAATCCA +
Preference number: 5 (lower is better)
Translates to: CSEEPWSCLCRSLFS*SPSWRVFRLTRENP
Trigger: TGGATTTTCCCTGGTCAGTCTAAAGACACGCCAGGATGGAGAGCAGGAGAAGAGGCTCCTGCACAGACAACTCCAGGGCTCCTCACTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107979.2
CDS GCA 90 bp AAAGTCTCACGTGGCTTGGCTTTATTCCACGGCTTATGCTTATACTaGGTGTGGCTCTGCACACGTGGAGGTCTAGCGATGACAGCCGAC +
Preference number: 5 (lower is better)
Translates to: KVSRGLALFHGLCLY*VWLCTRGGLAMTAD
Trigger: GTCGGCTGTCATCGCTAGACCTCCACGTGTGCAGAGCCACACGCAGTATAAGCATAAGCCGTGGAATAAAGCCAAGCCACGTGAGACTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107979.2
CDS GCA 90 bp TGCTCTGGAACTCGGTTGGTTTTGCTCCTGAAACACAACCTGCACTaGAGTAGCTGGCTGTTTAAGGCAGACCTTATCTGGATCTGGGGC +
Preference number: 5 (lower is better)
Translates to: CSGTRLVLLLKHNLH*SSWLFKADLIWIWG
Trigger: GCCCCAGATCCAGATAAGGTCTGCCTTAAACAGCCAGCTACTGCAGTGCAGGTTGTGTTTCAGGAGCAAAACCAACCGAGTTCCAGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107979.2
CDS GCA 90 bp AAAAATTTTAAAGTCTCACGTGGCTTGGCTTTATTCCACGGCTTATaGTTATACTGCGTGTGGCTCTGCACACGTGGAGGTCTAGCGATG +
Preference number: 5 (lower is better)
Translates to: KNFKVSRGLALFHGL*LYCVWLCTRGGLAM
Trigger: CATCGCTAGACCTCCACGTGTGCAGAGCCACACGCAGTATAAGCATAAGCCGTGGAATAAAGCCAAGCCACGTGAGACTTTAAAATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107979.2
CDS CAA 90 bp CAGCCTCTGGAAGGCGGCTGGGTCTCGTGTAGGGAGAGGCTGGCGTaGCATGCCCTGGTGGGACGTGACCTGGACCAGGTTGGCCCTGAG +
Preference number: 6 (lower is better)
Translates to: QPLEGGWVSCRERLA*HALVGRDLDQVGPE
Trigger: CTCAGGGCCAACCTGGTCCAGGTCACGTCCCACCAGGGCATGCAACGCCAGCCTCTCCCTACACGAGACCCAGCCGCCTTCCAGAGGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107979.2
CDS GCA 72 bp AAGGCGGCTGGGTCTCGTGTAGGGAGAGGCTGGCGTTaGATGCCCTGGTGGGACGTGACCTGGACCAGGTTG +
Preference number: 6 (lower is better)
Translates to: KAAGSRVGRGWR*MPWWDVTWTRL
Trigger: CAACCTGGTCCAGGTCACGTCCCACCAGGGCATGCAACGCCAGCCTCTCCCTACACGAGACCCAGCCGCCTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107979.2
CDS CCA 72 bp GGGACTGCGGGTCTGTTGAGGAGAGCAGCATATTTATaGAGCGCTGGATCCTCTGGGGCAGCCCCCAGCGAA +
Preference number: 6 (lower is better)
Translates to: GTAGLLRRAAYL*SAGSSGAAPSE
Trigger: TTCGCTGGGGGCTGCCCCAGAGGATCCAGCGCTCCATAAATATGCTGCTCTCCTCAACAGACCCGCAGTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107979.2
CDS TCA 72 bp CCTACTGCCACCGCAGGGCAGGGACTGCGGGTCTGTTaGGGAGAGCAGCATATTTATGGAGCGCTGGATCCT +
Preference number: 6 (lower is better)
Translates to: PTATAGQGLRVC*GEQHIYGALDP
Trigger: AGGATCCAGCGCTCCATAAATATGCTGCTCTCCTCAACAGACCCGCAGTCCCTGCCCTGCGGTGGCAGTAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107979.2
CDS GCA 72 bp AGAGTCTGTCTCCATGAAGACTTCTGGAGGTGGATCTaGGAACTGGAGCTCAGGGGACTCCTGGGGGCTGTG +
Preference number: 6 (lower is better)
Translates to: RVCLHEDFWRWI*ELELRGLLGAV
Trigger: CACAGCCCCCAGGAGTCCCCTGAGCTCCAGTTCGCAGATCCACCTCCAGAAGTCTTCATGGAGACAGACTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107979.2
CDS CCA 72 bp ACTGGATATGGGCATCTCCAGGCAAGCGGGGCTCTGTaGCAGTCCCAACAAGGCAGGGGAGATCTGGCTTTT +
Preference number: 6 (lower is better)
Translates to: TGYGHLQASGAL*QSQQGRGDLAF
Trigger: AAAAGCCAGATCTCCCCTGCCTTGTTGGGACTGCCACAGAGCCCCGCTTGCCTGGAGATGCCCATATCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107979.2
CDS GCA 72 bp GGAATAAAGTCCCTGCTGCCAAATCCCCAGGAATTCTaGCTTTCCAGGCGCTTTGGACACAGGCCGGGACCT +
Preference number: 6 (lower is better)
Translates to: GIKSLLPNPQEF*LSRRFGHRPGP
Trigger: AGGTCCCGGCCTGTGTCCAAAGCGCCTGGAAAGGCAGAATTCCTGGGGATTTGGCAGCAGGGACTTTATTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107979.2
CDS TCA 72 bp ACCAGTGTCTCAGAGGCCATGGGCATGTCTGCCAGATaGAATTCCTGTCCTACCTGGAGGGGATCAGTCCAG +
Preference number: 6 (lower is better)
Translates to: TSVSEAMGMSAR*NSCPTWRGSVQ
Trigger: CTGGACTGATCCCCTCCAGGTAGGACAGGAATTTCATCTGGCAGACATGCCCATGGCCTCTGAGACACTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107979.2
CDS CAA 72 bp CTGCCTTTCCAGGCGCTTTGGACACAGGCCGGGACCTaGCCCTCCCGGATCTGTTCACATTTGGTATCAAAA +
Preference number: 6 (lower is better)
Translates to: LPFQALWTQAGT*PSRICSHLVSK
Trigger: TTTTGATACCAAATGTGAACAGATCCGGGAGGGCAAGGTCCCGGCCTGTGTCCAAAGCGCCTGGAAAGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107979.2
CDS CAA 90 bp CTGCCGGGCAGATCTATGGGGCACTGCTCTGGAACTCGGTTGGTTTaGCTCCTGAAACACAACCTGCACTGCAGTAGCTGGCTGTTTAAG +
Preference number: 6 (lower is better)
Translates to: LPGRSMGHCSGTRLV*LLKHNLHCSSWLFK
Trigger: CTTAAACAGCCAGCTACTGCAGTGCAGGTTGTGTTTCAGGAGCAAAACCAACCGAGTTCCAGAGCAGTGCCCCATAGATCTGCCCGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107979.2
CDS GCA 72 bp CCTTGGCAAACAAGTGTGGCATGGGGGTTGTTCCTTTaGCCGCTGTGGGTAAGAACGTATCACCAGACCCAT +
Preference number: 6 (lower is better)
Translates to: PWQTSVAWGLFL*PLWVRTYHQTH
Trigger: ATGGGTCTGGTGATACGTTCTTACCCACAGCGGGCAAAGGAACAACCCCCATGCCACACTTGTTTGCCAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107979.2
CDS CCA 72 bp CCTCAAGCCCTGGAGAAACCAGTGTCTCAGAGGCCATaGGCATGTCTGCCAGATGAAATTCCTGTCCTACCT +
Preference number: 6 (lower is better)
Translates to: PQALEKPVSQRP*ACLPDEIPVLP
Trigger: AGGTAGGACAGGAATTTCATCTGGCAGACATGCCCATGGCCTCTGAGACACTGGTTTCTCCAGGGCTTGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107979.2
CDS GCA 72 bp CTGGGATCTAAACACAGGAGCTGCCGCACATTTCCCTaGTTGGGGACCCAGCTTTGGCTTTTCATGATAGAG +
Preference number: 6 (lower is better)
Translates to: LGSKHRSCRTFP*LGTQLWLFMIE
Trigger: CTCTATCATGAAAAGCCAAAGCTGGGTCCCCAAGCAGGGAAATGTGCGGCAGCTCCTGTGTTTAGATCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107979.2
CDS CCA 72 bp CCAGCTTTGGCTTTTCATGATAGAGAGCAGCTCGCATaGCTTCTCATCTTCTTCTCGGGAAAGTCCCCTGGC +
Preference number: 6 (lower is better)
Translates to: PALAFHDREQLA*LLIFFSGKSPG
Trigger: GCCAGGGGACTTTCCCGAGAAGAAGATGAGAAGCCATGCGAGCTGCTCTCTATCATGAAAAGCCAAAGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107979.2
CDS CAA 90 bp CCTACCTGGAGGGGATCAGTCCAGCAAAGCGGGGCACCATCTGCATaGATAGACCCTGTTAACTCTTCTGTTAGCTGTGTGAGTGTTTGG +
Preference number: 6 (lower is better)
Translates to: PTWRGSVQQSGAPSA*IDPVNSSVSCVSVW
Trigger: CCAAACACTCACACAGCTAACAGAAGAGTTAACAGGGTCTATCAATGCAGATGGTGCCCCGCTTTGCTGGACTGATCCCCTCCAGGTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107979.2
CDS GCA 72 bp AAAGTCTCACGTGGCTTGGCTTTATTCCACGGCTTATaGTTATACTGCGTGTGGCTCTGCACACGTGGAGGT +
Preference number: 6 (lower is better)
Translates to: KVSRGLALFHGL*LYCVWLCTRGG
Trigger: ACCTCCACGTGTGCAGAGCCACACGCAGTATAAGCATAAGCCGTGGAATAAAGCCAAGCCACGTGAGACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107979.2
CDS CAA 72 bp AGGGGATCAGTCCAGCAAAGCGGGGCACCATCTGCATaGATAGACCCTGTTAACTCTTCTGTTAGCTGTGTG +
Preference number: 6 (lower is better)
Translates to: RGSVQQSGAPSA*IDPVNSSVSCV
Trigger: CACACAGCTAACAGAAGAGTTAACAGGGTCTATCAATGCAGATGGTGCCCCGCTTTGCTGGACTGATCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107979.2
CDS GCA 72 bp ACTCGGTTGGTTTTGCTCCTGAAACACAACCTGCACTaGAGTAGCTGGCTGTTTAAGGCAGACCTTATCTGG +
Preference number: 6 (lower is better)
Translates to: TRLVLLLKHNLH*SSWLFKADLIW
Trigger: CCAGATAAGGTCTGCCTTAAACAGCCAGCTACTGCAGTGCAGGTTGTGTTTCAGGAGCAAAACCAACCGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107979.2
CDS CCA 72 bp GACCCTGTTAACTCTTCTGTTAGCTGTGTGAGTGTTTaGTTTCCCGGCACCACTGGAGAGTTTGTGGAGTAC +
Preference number: 6 (lower is better)
Translates to: DPVNSSVSCVSV*FPGTTGEFVEY
Trigger: GTACTCCACAAACTCTCCAGTGGTGCCGGGAAACCAAACACTCACACAGCTAACAGAAGAGTTAACAGGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107979.2
CDS TCA 72 bp ATAGGATGTGTGACAGTAAGCTGTGGGGTCAGGGTCTaGAAAGGAACCTGTGAGTTCAATGCCTCATGGTCT +
Preference number: 6 (lower is better)
Translates to: IGCVTVSCGVRV*KGTCEFNASWS
Trigger: AGACCATGAGGCATTGAACTCACAGGTTCCTTTTCAGACCCTGACCCCACAGCTTACTGTCACACATCCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107979.2
CDS CAA 72 bp GTGAGTAAGGGCTTTTCCACAAGGCTAGGGATTGGTTaGCAGGATAGTCTTTGTCCTTGGTCACCACTAGAC +
Preference number: 6 (lower is better)
Translates to: VSKGFSTRLGIG*QDSLCPWSPLD
Trigger: GTCTAGTGGTGACCAAGGACAAAGACTATCCTGCAAACCAATCCCTAGCCTTGTGGAAAAGCCCTTACTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107979.2
CDS CAA 72 bp CCAACTACTGACTTCTCAGAAGAAGAAAACTGGGCCTaGGGCCCTCTGAAGTCCTCTGGCTTTGTTTTCTTG +
Preference number: 6 (lower is better)
Translates to: PTTDFSEEENWA*GPLKSSGFVFL
Trigger: CAAGAAAACAAAGCCAGAGGACTTCAGAGGGCCCAAGGCCCAGTTTTCTTCTTCTGAGAAGTCAGTAGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107979.2
CDS CAA 72 bp TTTCCTGGCCCGAAAAATTTTAAAGTCTCACGTGGCTaGGCTTTATTCCACGGCTTATGCTTATACTGCGTG +
Preference number: 6 (lower is better)
Translates to: FPGPKNFKVSRG*ALFHGLCLYCV
Trigger: CACGCAGTATAAGCATAAGCCGTGGAATAAAGCCAAGCCACGTGAGACTTTAAAATTTTTCGGGCCAGGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107979.2
CDS TCA 72 bp ATGAACACAGTCTTGAGAGCTAGTATTCAGGATAAATaGAACTGGTTGGTTATGTTCTGGCCGGAGATACAC +
Preference number: 6 (lower is better)
Translates to: MNTVLRASIQDK*NWLVMFWPEIH
Trigger: GTGTATCTCCGGCCAGAACATAACCAACCAGTTTCATTTATCCTGAATACTAGCTCTCAAGACTGTGTTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107979.2
CDS GCA 72 bp CCTCATGGTCTTGGAGCTGCTGGATATAGTTTAAATTaGTGTGCACTGTGTCTTCCTCATTCATTAAAACCA +
Preference number: 6 (lower is better)
Translates to: PHGLGAAGYSLN*CALCLPHSLKP
Trigger: TGGTTTTAATGAATGAGGAAGACACAGTGCACAGCAATTTAAACTATATCCAGCAGCTCCAAGACCATGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107979.2