Pregenerated sensors for FAM199X (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042595Ensembl transcript IDs: ENSMUST00000047852.8
Found 126 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAGAATGTGCACGAGAATAGTCTGGCGTTAGTTAAAACACAGTGCTaGTCCAAACCCACACTGCCTGTGGCTCTGGAATGGGGCCCAAAC | + |
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Preference number: 1 (lower is better) Translates to: ENVHENSLALVKTQC*SKPTLPVALEWGPN Trigger: GTTTGGGCCCCATTCCAGAGCCACAGGCAGTGTGGGTTTGGAGCAGCACTGTGTTTTAACTAACGCCAGACTATTCTCGTGCACATTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
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| 3UTR GCA 90 bp | AATGAGAATGTGCACGAGAATAGTCTGGCGTTAGTTAAAACACAGTaGTGCTCCAAACCCACACTGCCTGTGGCTCTGGAATGGGGCCCA | + |
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Preference number: 1 (lower is better) Translates to: NENVHENSLALVKTQ*CSKPTLPVALEWGP Trigger: TGGGCCCCATTCCAGAGCCACAGGCAGTGTGGGTTTGGAGCAGCACTGTGTTTTAACTAACGCCAGACTATTCTCGTGCACATTCTCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
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| 3UTR CCA 90 bp | TTATTTATCTATCCACCTGCTGATGGGTATTCATTTATTGGCTATTaGGAGCAGTACTGTAATAGACATGGAAGCACACATACAAATCCC | + |
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Preference number: 1 (lower is better) Translates to: LFIYPPADGYSFIGY*EQYCNRHGSTHTNP Trigger: GGGATTTGTATGTGTGCTTCCATGTCTATTACAGTACTGCTCCCAATAGCCAATAAATGAATACCCATCAGCAGGTGGATAGATAAATAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
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| 3UTR TCA 90 bp | TTACAGGGAAAACTGCGTACATTCTTTATTAAGTATTCTAGGATCTaGCCCCAAGATCTCTTTGGTTCCTTTAAACTAAGATGGAGTACC | + |
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Preference number: 1 (lower is better) Translates to: LQGKLRTFFIKYSRI*PQDLFGSFKLRWST Trigger: GGTACTCCATCTTAGTTTAAAGGAACCAAAGAGATCTTGGGGTCAGATCCTAGAATACTTAATAAAGAATGTACGCAGTTTTCCCTGTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
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| 3UTR TCA 90 bp | AAATGCAATGTTTGTGTTTCTGAATCTGGCCTGCTTTGCTTAACATaGTCTCCGTCTAGTTCCATCTCTTTTCTTGCTAGTGACAAAATT | + |
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Preference number: 1 (lower is better) Translates to: KCNVCVSESGLLCLT*SPSSSISFLASDKI Trigger: AATTTTGTCACTAGCAAGAAAAGAGATGGAACTAGACGGAGATCATGTTAAGCAAAGCAGGCCAGATTCAGAAACACAAACATTGCATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
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| 3UTR TCA 90 bp | TATTTAAGAAATGGAAATTTAATTGTAGTGAGCCAGCTTGGATTTTaGGCTATGCTGTACAGCTTCCTCATTCTTAACAGCCAGTTACAG | + |
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Preference number: 1 (lower is better) Translates to: YLRNGNLIVVSQLGF*AMLYSFLILNSQLQ Trigger: CTGTAACTGGCTGTTAAGAATGAGGAAGCTGTACAGCATAGCTCAAAATCCAAGCTGGCTCACTACAATTAAATTTCCATTTCTTAAATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
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| 3UTR TCA 90 bp | CAGTCTCTAAAGTTTGTTGAACTCCAAGTGGTCTGTCAGTTAATTTaGAACATCAACCTGTCCACACGTCAAACATATAAAATTGAGATA | + |
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Preference number: 1 (lower is better) Translates to: QSLKFVELQVVCQLI*NINLSTRQTYKIEI Trigger: TATCTCAATTTTATATGTTTGACGTGTGGACAGGTTGATGTTTCAAATTAACTGACAGACCACTTGGAGTTCAACAAACTTTAGAGACTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
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| 3UTR TCA 90 bp | GGACCAAATTCAAATATTTCAAGGACTATCTTCCAAATTATATACTaGCAGAAACGTCTAGCTCAAAATGCCTCAAAGGCTTCCTACTTA | + |
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Preference number: 1 (lower is better) Translates to: GPNSNISRTIFQIIY*QKRLAQNASKASYL Trigger: TAAGTAGGAAGCCTTTGAGGCATTTTGAGCTAGACGTTTCTGTCAGTATATAATTTGGAAGATAGTCCTTGAAATATTTGAATTTGGTCC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
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| 3UTR-3UTR TCA 90 bp | CCCACACTGCCTGTGGCTCTGGAATGGGGCCCAAACACAATTCTAAGGTCTTTTCGGGATGCTGAAAGCTaGGGGTGCTGGGGCTACTCT | + |
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Preference number: 2 (lower is better) Translates to: PTLPVALEWGPNTILRSFRDAES*GCWGYS Trigger: AGAGTAGCCCCAGCACCCTCAGCTTTCAGCATCCCG...AAAAGACCTTAGAATTGTGTTTGGGCCCCATTCCAGAGCCACAGGCAGTGTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
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| 3UTR-3UTR GCA 90 bp | TATTTATCTATCCACCTGCTGATGGGTATTCATTTATTGGCTATTGGGAGCAGTGCTCCAAACCCACACTaGCTGTGGCTCTGGAATGGG | + |
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Preference number: 2 (lower is better) Translates to: YLSIHLLMGIHLLAIGSSAPNPH*LWLWNG Trigger: CCCATTCCAGAGCCACAGGCAGTGTGGGTTTGGAGC...ACTGCTCCCAATAGCCAATAAATGAATACCCATCAGCAGGTGGATAGATAAATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
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| 3UTR-3UTR CCA 90 bp | TTGTTCATGACTTCTGGGAAACTGAGACCCTCACAAAACAAGTTTATAGAGTCTAACCCACACTGCCTGTaGCTCTGGAATGGGGCCCAA | + |
|
Preference number: 2 (lower is better) Translates to: LFMTSGKLRPSQNKFIESNPHCL*LWNGAQ Trigger: TTGGGCCCCATTCCAGAGCCACAGGCAGTGTGGGTT...AGACTCTATAAACTTGTTTTGTGAGGGTCTCAGTTTCCCAGAAGTCATGAACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
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| 3UTR-3UTR CCA 90 bp | CTCCATGATTTCACATTTAGATATAAGAGTCCTACTAGGCACCAACAAAGGTGTCACTGCCTGTGGCTCTaGAATGGGGCCCAAACACAA | + |
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Preference number: 2 (lower is better) Translates to: LHDFTFRYKSPTRHQQRCHCLWL*NGAQTQ Trigger: TTGTGTTTGGGCCCCATTCCAGAGCCACAGGCAGTG...ACACCTTTGTTGGTGCCTAGTAGGACTCTTATATCTAAATGTGAAATCATGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
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| 3UTR-3UTR CCA 90 bp | CTCCATGATTTCACATTTAGATATAAGAGTCCTACTAGGCACCAACAAAGGTGTCCTGTGGCTCTGGAATaGGGCCCAAACACAATTCTA | + |
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Preference number: 2 (lower is better) Translates to: LHDFTFRYKSPTRHQQRCPVALE*GPNTIL Trigger: TAGAATTGTGTTTGGGCCCCATTCCAGAGCCACAGG...ACACCTTTGTTGGTGCCTAGTAGGACTCTTATATCTAAATGTGAAATCATGGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
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| 3UTR-3UTR GCA 90 bp | AAGGCTACAACAGGAAAATTTGATTGGTATCATTGCCTAACTGGAATCTCCACTGTTAAAACACAGTGCTaGTCCAAACCCACACTGCCT | + |
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Preference number: 2 (lower is better) Translates to: KATTGKFDWYHCLTGISTVKTQC*SKPTLP Trigger: AGGCAGTGTGGGTTTGGAGCAGCACTGTGTTTTAAC...AGTGGAGATTCCAGTTAGGCAATGATACCAATCAAATTTTCCTGTTGTAGCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
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| 3UTR-3UTR GCA 90 bp | GGAGGTAGGAGGAAAGTCAGAAATACTACTGTAACTGAAAGCACACATATTCACTTAGTTAAAACACAGTaGTGCTCCAAACCCACACTG | + |
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Preference number: 2 (lower is better) Translates to: GGRRKVRNTTVTESTHIHLVKTQ*CSKPTL Trigger: CAGTGTGGGTTTGGAGCAGCACTGTGTTTTAACTAA...GTGAATATGTGTGCTTTCAGTTACAGTAGTATTTCTGACTTTCCTCCTACCTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
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| 3UTR-3UTR GCA 90 bp | GGAGGTAGGAGGAAAGTCAGAAATACTACTGTAACTGAAAGCACACATATTCACTCTAGCCCATGCCAATaGTCAAAGACACATACAAGA | + |
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Preference number: 2 (lower is better) Translates to: GGRRKVRNTTVTESTHIHSSPCQ*SKTHTR Trigger: TCTTGTATGTGTCTTTGAGCATTGGCATGGGCTAGA...GTGAATATGTGTGCTTTCAGTTACAGTAGTATTTCTGACTTTCCTCCTACCTCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
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| 3UTR-3UTR GCA 90 bp | TATTTATCTATCCACCTGCTGATGGGTATTCATTTATTGGCTATTGGGAGCAGTAGAATAGGAAGAGCATaGAGATTATCTCCTCTGTGG | + |
|
Preference number: 2 (lower is better) Translates to: YLSIHLLMGIHLLAIGSSRIGRA*RLSPLW Trigger: CCACAGAGGAGATAATCTGCATGCTCTTCCTATTCT...ACTGCTCCCAATAGCCAATAAATGAATACCCATCAGCAGGTGGATAGATAAATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
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| 3UTR-3UTR CCA 90 bp | AAGAACTCCCATACAGGTATCCACTGCTACAGACAGTTTCTATCGCTAGCAGTATTTAAAATCTGCCCATaGCACTTTGGTAAACTTACT | + |
|
Preference number: 2 (lower is better) Translates to: KNSHTGIHCYRQFLSLAVFKICP*HFGKLT Trigger: AGTAAGTTTACCAAAGTGCCATGGGCAGATTTTAAA...TACTGCTAGCGATAGAAACTGTCTGTAGCAGTGGATACCTGTATGGGAGTTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCAACCCAAACTAACTTTACCCTCCATCAATTCCCGAGAAGAATTCTTGAAGTTATATAGATGCAAATaGCAACGTTCACCACCGTTA | + |
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Preference number: 2 (lower is better) Translates to: QQPKLTLPSINSREEFLKLYRCK*QRSPPL Trigger: TAACGGTGGTGAACGTTGCCATTTGCATCTATATAA...CTTCAAGAATTCTTCTCGGGAATTGATGGAGGGTAAAGTTAGTTTGGGTTGCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
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| 3UTR-3UTR TCA 90 bp | TTGTTCATGACTTCTGGGAAACTGAGACCCTCACAAAACAAGTTTATAGAGTCTTTCTACCATAGAGAGTaGAGCTGGACTTACAGAAAA | + |
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Preference number: 2 (lower is better) Translates to: LFMTSGKLRPSQNKFIESFYHRE*SWTYRK Trigger: TTTTCTGTAAGTCCAGCTTCACTCTCTATGGTAGAA...AGACTCTATAAACTTGTTTTGTGAGGGTCTCAGTTTCCCAGAAGTCATGAACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
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| 3UTR-3UTR CCA 90 bp | GGAGGTAGGAGGAAAGTCAGAAATACTACTGTAACTGAAAGCACACATATTCACAAACTCACATCTAATTaGAAAAGACTAGGGCCCTTT | + |
|
Preference number: 2 (lower is better) Translates to: GGRRKVRNTTVTESTHIHKLTSN*KRLGPF Trigger: AAAGGGCCCTAGTCTTTTCCAATTAGATGTGAGTTT...GTGAATATGTGTGCTTTCAGTTACAGTAGTATTTCTGACTTTCCTCCTACCTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
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| 3UTR-3UTR GCA 90 bp | TTGTTCATGACTTCTGGGAAACTGAGACCCTCACAAAACAAGTTTATAGAGTCTTCAGTAGTTATCACTTaGGGAAATGATTCTCACTTG | + |
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Preference number: 2 (lower is better) Translates to: LFMTSGKLRPSQNKFIESSVVIT*GNDSHL Trigger: CAAGTGAGAATCATTTCCGCAAGTGATAACTACTGA...AGACTCTATAAACTTGTTTTGTGAGGGTCTCAGTTTCCCAGAAGTCATGAACAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
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| 3UTR-3UTR GCA 90 bp | TATTTATCTATCCACCTGCTGATGGGTATTCATTTATTGGCTATTGGGAGCAGTTTTGATTGGTATCATTaGCTAACTGGAATCTCCACT | + |
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Preference number: 2 (lower is better) Translates to: YLSIHLLMGIHLLAIGSSFDWYH*LTGIST Trigger: AGTGGAGATTCCAGTTAGGCAATGATACCAATCAAA...ACTGCTCCCAATAGCCAATAAATGAATACCCATCAGCAGGTGGATAGATAAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
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| 3UTR-3UTR GCA 90 bp | TATTTATCTATCCACCTGCTGATGGGTATTCATTTATTGGCTATTGGGAGCAGTTTTTCTACTGCATACTaGTTTATATACCCACAGCAG | + |
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Preference number: 2 (lower is better) Translates to: YLSIHLLMGIHLLAIGSSFSTAY*FIYPQQ Trigger: CTGCTGTGGGTATATAAAGCAGTATGCAGTAGAAAA...ACTGCTCCCAATAGCCAATAAATGAATACCCATCAGCAGGTGGATAGATAAATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
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| 3UTR-3UTR CCA 90 bp | CTCCATGATTTCACATTTAGATATAAGAGTCCTACTAGGCACCAACAAAGGTGTGTATCATTGCCTAACTaGAATCTCCACTTGAAACTT | + |
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Preference number: 2 (lower is better) Translates to: LHDFTFRYKSPTRHQQRCVSLPN*NLHLKL Trigger: AAGTTTCAAGTGGAGATTCCAGTTAGGCAATGATAC...ACACCTTTGTTGGTGCCTAGTAGGACTCTTATATCTAAATGTGAAATCATGGAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
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| 3UTR-3UTR CCA 90 bp | GGAGGTAGGAGGAAAGTCAGAAATACTACTGTAACTGAAAGCACACATATTCACACAGGAAAATTTGATTaGTATCATTGCCTAACTGGA | + |
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Preference number: 2 (lower is better) Translates to: GGRRKVRNTTVTESTHIHTGKFD*YHCLTG Trigger: TCCAGTTAGGCAATGATACCAATCAAATTTTCCTGT...GTGAATATGTGTGCTTTCAGTTACAGTAGTATTTCTGACTTTCCTCCTACCTCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
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| 3UTR-3UTR CCA 90 bp | TTGTTCATGACTTCTGGGAAACTGAGACCCTCACAAAACAAGTTTATAGAGTCTCACTGGAACAAAATCTaGACTTCTATTCTTCCATTT | + |
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Preference number: 2 (lower is better) Translates to: LFMTSGKLRPSQNKFIESHWNKI*TSILPF Trigger: AAATGGAAGAATAGAAGTCCAGATTTTGTTCCAGTG...AGACTCTATAAACTTGTTTTGTGAGGGTCTCAGTTTCCCAGAAGTCATGAACAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
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| 3UTR GCA 72 bp | GTGCACGAGAATAGTCTGGCGTTAGTTAAAACACAGTaGTGCTCCAAACCCACACTGCCTGTGGCTCTGGAA | + |
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Preference number: 3 (lower is better) Translates to: VHENSLALVKTQ*CSKPTLPVALE Trigger: TTCCAGAGCCACAGGCAGTGTGGGTTTGGAGCAGCACTGTGTTTTAACTAACGCCAGACTATTCTCGTGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
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| 3UTR TCA 72 bp | CTTGTTTTGAACTTACAAATCCTCACCTCAGCCTCCTaGACGCTAGGATTAAAGGTGTCTGTCAACAGACCA | + |
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Preference number: 3 (lower is better) Translates to: LVLNLQILTSAS*TLGLKVSVNRP Trigger: TGGTCTGTTGACAGACACCTTTAATCCTAGCGTTCAGGAGGCTGAGGTGAGGATTTGTAAGTTCAAAACAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
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| 3UTR-3UTR CAA 90 bp | AAGAACTCCCATACAGGTATCCACTGCTACAGACAGTTTCTATCGCTAGCAGTAGGTCTGTCAGTTAATTaGAAACATCAACCTGTCCAC | + |
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Preference number: 3 (lower is better) Translates to: KNSHTGIHCYRQFLSLAVGLSVN*KHQPVH Trigger: GTGGACAGGTTGATGTTTCAAATTAACTGACAGACC...TACTGCTAGCGATAGAAACTGTCTGTAGCAGTGGATACCTGTATGGGAGTTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
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| 3UTR GCA 72 bp | CGAAAGTTAAAGCCCAACCACAGGCCTCAGCAATGCTaGAAGGTACTAATTTTTACCCTCAGTTTCAATTCT | + |
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Preference number: 3 (lower is better) Translates to: RKLKPNHRPQQC*KVLIFTLSFNS Trigger: AGAATTGAAACTGAGGGTAAAAATTAGTACCTTGCAGCATTGCTGAGGCCTGTGGTTGGGCTTTAACTTTCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
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| 3UTR GCA 72 bp | AAACAAATAGTTTGCAAGTGGGTGATGGATAAATGTTaGCCTGTATCTCAATGTGGCCCCACCTTCCTTAGA | + |
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Preference number: 3 (lower is better) Translates to: KQIVCKWVMDKC*PVSQCGPTFLR Trigger: TCTAAGGAAGGTGGGGCCACATTGAGATACAGGGCAACATTTATCCATCACCCACTTGCAAACTATTTGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
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| 3UTR TCA 72 bp | GTTTGTGTTTCTGAATCTGGCCTGCTTTGCTTAACATaGTCTCCGTCTAGTTCCATCTCTTTTCTTGCTAGT | + |
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Preference number: 3 (lower is better) Translates to: VCVSESGLLCLT*SPSSSISFLAS Trigger: ACTAGCAAGAAAAGAGATGGAACTAGACGGAGATCATGTTAAGCAAAGCAGGCCAGATTCAGAAACACAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
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| 3UTR-3UTR CAA 90 bp | TTGTTCATGACTTCTGGGAAACTGAGACCCTCACAAAACAAGTTTATAGAGTCTAACTGGAATCTCCACTaGAAACTTAATCCCCACTTG | + |
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Preference number: 3 (lower is better) Translates to: LFMTSGKLRPSQNKFIESNWNLH*KLNPHL Trigger: CAAGTGGGGATTAAGTTTCAAGTGGAGATTCCAGTT...AGACTCTATAAACTTGTTTTGTGAGGGTCTCAGTTTCCCAGAAGTCATGAACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
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| 3UTR-3UTR CAA 90 bp | CAGCAACCCAAACTAACTTTACCCTCCATCAATTCCCGAGAAGAATTCTTGAAGTATCCTGAACCAGTTTaGGATTTTCTTTTACTGAGC | + |
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Preference number: 3 (lower is better) Translates to: QQPKLTLPSINSREEFLKYPEPV*DFLLLS Trigger: GCTCAGTAAAAGAAAATCCAAAACTGGTTCAGGATA...CTTCAAGAATTCTTCTCGGGAATTGATGGAGGGTAAAGTTAGTTTGGGTTGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
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| 3UTR-3UTR CAA 90 bp | TATTTATCTATCCACCTGCTGATGGGTATTCATTTATTGGCTATTGGGAGCAGTGACTCAAAGAGACTTTaGCCCTTTTGCGATAGTTTG | + |
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Preference number: 3 (lower is better) Translates to: YLSIHLLMGIHLLAIGSSDSKRL*PFCDSL Trigger: CAAACTATCGCAAAAGGGCAAAAGTCTCTTTGAGTC...ACTGCTCCCAATAGCCAATAAATGAATACCCATCAGCAGGTGGATAGATAAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
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| 3UTR TCA 72 bp | AATGGAAATTTAATTGTAGTGAGCCAGCTTGGATTTTaGGCTATGCTGTACAGCTTCCTCATTCTTAACAGC | + |
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Preference number: 3 (lower is better) Translates to: NGNLIVVSQLGF*AMLYSFLILNS Trigger: GCTGTTAAGAATGAGGAAGCTGTACAGCATAGCTCAAAATCCAAGCTGGCTCACTACAATTAAATTTCCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
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| 3UTR CCA 72 bp | CTCCACTGTCAGTTGTGGACAGAAGATAACCAACACTaGAACAAAATCTGGACTTCTATTCTTCCATTTATT | + |
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Preference number: 3 (lower is better) Translates to: LHCQLWTEDNQH*NKIWTSILPFI Trigger: AATAAATGGAAGAATAGAAGTCCAGATTTTGTTCCAGTGTTGGTTATCTTCTGTCCACAACTGACAGTGGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
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| 3UTR-3UTR CAA 90 bp | TTGTTCATGACTTCTGGGAAACTGAGACCCTCACAAAACAAGTTTATAGAGTCTAAACTTAATCCCCACTaGAAACACAACGTTAAGTCT | + |
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Preference number: 3 (lower is better) Translates to: LFMTSGKLRPSQNKFIESKLNPH*KHNVKS Trigger: AGACTTAACGTTGTGTTTCAAGTGGGGATTAAGTTT...AGACTCTATAAACTTGTTTTGTGAGGGTCTCAGTTTCCCAGAAGTCATGAACAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
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| 3UTR-3UTR CAA 90 bp | TTGTTCATGACTTCTGGGAAACTGAGACCCTCACAAAACAAGTTTATAGAGTCTCATTTTCCAAAAGCCTaGAAATCTCAACGTAAACGA | + |
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Preference number: 3 (lower is better) Translates to: LFMTSGKLRPSQNKFIESHFPKA*KSQRKR Trigger: TCGTTTACGTTGAGATTTCAAGGCTTTTGGAAAATG...AGACTCTATAAACTTGTTTTGTGAGGGTCTCAGTTTCCCAGAAGTCATGAACAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
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| 3UTR TCA 72 bp | CTGCTTTATATACCCACAGCAGTCTCTAAAGTTTGTTaGACTCCAAGTGGTCTGTCAGTTAATTTGAAACAT | + |
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Preference number: 3 (lower is better) Translates to: LLYIPTAVSKVC*TPSGLSVNLKH Trigger: ATGTTTCAAATTAACTGACAGACCACTTGGAGTTCAACAAACTTTAGAGACTGCTGTGGGTATATAAAGCAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
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| 3UTR TCA 72 bp | AATCGACACTTTACATTCCAGTTCTACCATAGAGAGTaGAGCTGGACTTACAGAAAATTTCATGACATACCT | + |
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Preference number: 3 (lower is better) Translates to: NRHFTFQFYHRE*SWTYRKFHDIP Trigger: AGGTATGTCATGAAATTTTCTGTAAGTCCAGCTTCACTCTCTATGGTAGAACTGGAATGTAAAGTGTCGATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
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| 3UTR TCA 72 bp | GTCAAATGCCAGTGCATTCAACATCAATACTACTATTaGACACAAACGAACTATACTATCAGCAACCCAAAC | + |
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Preference number: 3 (lower is better) Translates to: VKCQCIQHQYYY*TQTNYTISNPN Trigger: GTTTGGGTTGCTGATAGTATAGTTCGTTTGTGTTCAATAGTAGTATTGATGTTGAATGCACTGGCATTTGAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
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| 3UTR-3UTR CAA 90 bp | AACTTTAAGGCTACAACAGGAAAATTTGATTGGTATCATTGCCTAACTGGAATCACCCTAACCAAAAGTTaGGTCAAGATGAATGTAAAC | + |
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Preference number: 3 (lower is better) Translates to: NFKATTGKFDWYHCLTGITLTKS*VKMNVN Trigger: GTTTACATTCATCTTGACCAAACTTTTGGTTAGGGT...GATTCCAGTTAGGCAATGATACCAATCAAATTTTCCTGTTGTAGCCTTAAAGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
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| 3UTR TCA 72 bp | AAGTTTGTTGAACTCCAAGTGGTCTGTCAGTTAATTTaGAACATCAACCTGTCCACACGTCAAACATATAAA | + |
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Preference number: 3 (lower is better) Translates to: KFVELQVVCQLI*NINLSTRQTYK Trigger: TTTATATGTTTGACGTGTGGACAGGTTGATGTTTCAAATTAACTGACAGACCACTTGGAGTTCAACAAACTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
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| 3UTR TCA 72 bp | CTACCTATTTCAACAATTCTCTCTGGATTATCTACATaGAACATCCTAACAGATAACGGAGCACTGATAACA | + |
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Preference number: 3 (lower is better) Translates to: LPISTILSGLST*NILTDNGALIT Trigger: TGTTATCAGTGCTCCGTTATCTGTTAGGATGTTTCATGTAGATAATCCAGAGAGAATTGTTGAAATAGGTAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
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| 3UTR CCA 72 bp | CTTTTCTTGCTAGTGACAAAATTCCAGTCTTCATTATaGCTGAATACAGCTCTGCTATGTATCTATGTTACA | + |
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Preference number: 3 (lower is better) Translates to: LFLLVTKFQSSL*LNTALLCIYVT Trigger: TGTAACATAGATACATAGCAGAGCTGTATTCAGCCATAATGAAGACTGGAATTTTGTCACTAGCAAGAAAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
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| 3UTR CCA 72 bp | TTTAAGAAATGGAAATTTAATTGTAGTGAGCCAGCTTaGATTTTGAGCTATGCTGTACAGCTTCCTCATTCT | + |
|
Preference number: 3 (lower is better) Translates to: FKKWKFNCSEPA*ILSYAVQLPHS Trigger: AGAATGAGGAAGCTGTACAGCATAGCTCAAAATCCAAGCTGGCTCACTACAATTAAATTTCCATTTCTTAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
||
| 3UTR TCA 72 bp | AAACTGCGTACATTCTTTATTAAGTATTCTAGGATCTaGCCCCAAGATCTCTTTGGTTCCTTTAAACTAAGA | + |
|
Preference number: 3 (lower is better) Translates to: KLRTFFIKYSRI*PQDLFGSFKLR Trigger: TCTTAGTTTAAAGGAACCAAAGAGATCTTGGGGTCAGATCCTAGAATACTTAATAAAGAATGTACGCAGTTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
||
| 3UTR TCA 72 bp | TCAAATATTTCAAGGACTATCTTCCAAATTATATACTaGCAGAAACGTCTAGCTCAAAATGCCTCAAAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: SNISRTIFQIIY*QKRLAQNASKA Trigger: AGCCTTTGAGGCATTTTGAGCTAGACGTTTCTGTCAGTATATAATTTGGAAGATAGTCCTTGAAATATTTGA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
||
| 3UTR TCA 72 bp | ACCTGTCATTGGCACACGGTAATTCCACATTTACATTaGCATAGTCAAAACGGATATTCATTAATTAAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: TCHWHTVIPHLH*HSQNGYSLIKQ Trigger: TTGCTTAATTAATGAATATCCGTTTTGACTATGTCAATGTAAATGTGGAATTACCGTGTGCCAATGACAGGT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
||
| 3UTR GCA 72 bp | CCAAATTATATACTGACAGAAACGTCTAGCTCAAAATaGCTCAAAGGCTTCCTACTTAATAACATTCAAATC | + |
|
Preference number: 3 (lower is better) Translates to: PNYILTETSSSK*LKGFLLNNIQI Trigger: GATTTGAATGTTATTAAGTAGGAAGCCTTTGAGGCATTTTGAGCTAGACGTTTCTGTCAGTATATAATTTGG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
||
| CDS-3UTR CCA 90 bp | CCCACACTGCCTGTGGCTCTGGAATGGGGCCCAAACACAATTCTAAGGTCTTTTTGCTGGCACTGGCGCTaGCACCGCTCACTCCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: PTLPVALEWGPNTILRSFCWHWR*HRSLHW Trigger: CCAGTGGAGTGAGCGGTGCCAGCGCCAGTGCCAGCA...AAAAGACCTTAGAATTGTGTTTGGGCCCCATTCCAGAGCCACAGGCAGTGTGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
||
| CDS-3UTR GCA 90 bp | CAGCAACCCAAACTAACTTTACCCTCCATCAATTCCCGAGAAGAATTCTTGAAGCCTCGCTGGGGCAGGTaGCCACCCCGCGAGGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: QQPKLTLPSINSREEFLKPRWGR*PPREEL Trigger: GAGCTCCTCGCGGGGTGGGCACCTGCCCCAGCGAGG...CTTCAAGAATTCTTCTCGGGAATTGATGGAGGGTAAAGTTAGTTTGGGTTGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
||
| CDS-3UTR CCA 90 bp | AAGAACTCCCATACAGGTATCCACTGCTACAGACAGTTTCTATCGCTAGCAGTAAGCCAGGTTCCTCGCTaGGGCAGGTGCCCACCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: KNSHTGIHCYRQFLSLAVSQVPR*GRCPPR Trigger: GCGGGGTGGGCACCTGCCCCAGCGAGGAACCTGGCT...TACTGCTAGCGATAGAAACTGTCTGTAGCAGTGGATACCTGTATGGGAGTTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
||
| CDS-3UTR CCA 90 bp | CCCACACTGCCTGTGGCTCTGGAATGGGGCCCAAACACAATTCTAAGGTCTTTTTGGCAGGAGGAGAGCTaGCAGCCGAAGTCGCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: PTLPVALEWGPNTILRSFWQEES*QPKSLM Trigger: CATCAGCGACTTCGGCTGCCAGCTCTCCTCCTGCCA...AAAAGACCTTAGAATTGTGTTTGGGCCCCATTCCAGAGCCACAGGCAGTGTGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
||
| CDS-3UTR CCA 90 bp | CCCACACTGCCTGTGGCTCTGGAATGGGGCCCAAACACAATTCTAAGGTCTTTTGTGCTCGGCTCATGTTaGCACTGGAGTTTGAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PTLPVALEWGPNTILRSFVLGSC*HWSLKQ Trigger: CTGCTTCAAACTCCAGTGCCAACATGAGCCGAGCAC...AAAAGACCTTAGAATTGTGTTTGGGCCCCATTCCAGAGCCACAGGCAGTGTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
||
| CDS-3UTR TCA 90 bp | CCCACACTGCCTGTGGCTCTGGAATGGGGCCCAAACACAATTCTAAGGTCTTTTGTTGGCACTGGAGTTTaGAGCAGAGTTTCCAACACT | + |
|
Preference number: 4 (lower is better) Translates to: PTLPVALEWGPNTILRSFVGTGV*SRVSNT Trigger: AGTGTTGGAAACTCTGCTTCAAACTCCAGTGCCAAC...AAAAGACCTTAGAATTGTGTTTGGGCCCCATTCCAGAGCCACAGGCAGTGTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
||
| CDS-3UTR CCA 90 bp | GGAGGTAGGAGGAAAGTCAGAAATACTACTGTAACTGAAAGCACACATATTCACAGCGGATCCGTGCGATaGCAGGAGGAGAGCTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GGRRKVRNTTVTESTHIHSGSVR*QEESWQ Trigger: CTGCCAGCTCTCCTCCTGCCATCGCACGGATCCGCT...GTGAATATGTGTGCTTTCAGTTACAGTAGTATTTCTGACTTTCCTCCTACCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
||
| CDS-3UTR CCA 90 bp | GGATTTTCTTTTACTGAGCATCAACAAACAAATAGTTTGCAAGTGGGTGATGGATGGCACTGCTGCTGCTaGCACTGGCGCTGGCACCGC | + |
|
Preference number: 4 (lower is better) Translates to: GFSFTEHQQTNSLQVGDGWHCCC*HWRWHR Trigger: GCGGTGCCAGCGCCAGTGCCAGCAGCAGCAGTGCCA...TCCATCACCCACTTGCAAACTATTTGTTTGTTGATGCTCAGTAAAAGAAAATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
||
| CDS-3UTR TCA 90 bp | AAGGCTACAACAGGAAAATTTGATTGGTATCATTGCCTAACTGGAATCTCCACTGGCAGCCGAAGTCGCTaGTGTCCAGGCAGCCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: KATTGKFDWYHCLTGISTGSRSR*CPGSQV Trigger: AACCTGGCTGCCTGGACATCAGCGACTTCGGCTGCC...AGTGGAGATTCCAGTTAGGCAATGATACCAATCAAATTTTCCTGTTGTAGCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
||
| CDS-3UTR TCA 90 bp | CCCACACTGCCTGTGGCTCTGGAATGGGGCCCAAACACAATTCTAAGGTCTTTTCTCAAATTCACTATCTaGCCAATCCCAGTACGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PTLPVALEWGPNTILRSFLKFTI*PIPVRA Trigger: AGCACGTACTGGGATTGGTCAGATAGTGAATTTGAG...AAAAGACCTTAGAATTGTGTTTGGGCCCCATTCCAGAGCCACAGGCAGTGTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
||
| CDS-3UTR GCA 90 bp | AAGGCTACAACAGGAAAATTTGATTGGTATCATTGCCTAACTGGAATCTCCACTGGTGGAGCGGATCCGTaGGATGGCAGGAGGAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KATTGKFDWYHCLTGISTGGADP*DGRRRA Trigger: AGCTCTCCTCCTGCCATCGCACGGATCCGCTCCACC...AGTGGAGATTCCAGTTAGGCAATGATACCAATCAAATTTTCCTGTTGTAGCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
||
| CDS-3UTR GCA 90 bp | CAGCAACCCAAACTAACTTTACCCTCCATCAATTCCCGAGAAGAATTCTTGAAGCCGCTCTGCCGCACTTaGAGACAGGTTGCTGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: QQPKLTLPSINSREEFLKPLCRT*RQVAVT Trigger: AGTGACAGCAACCTGTCTGCAAGTGCGGCAGAGCGG...CTTCAAGAATTCTTCTCGGGAATTGATGGAGGGTAAAGTTAGTTTGGGTTGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
||
| CDS-3UTR TCA 90 bp | AAGAACTCCCATACAGGTATCCACTGCTACAGACAGTTTCTATCGCTAGCAGTATGGTGCTTGCACAGCTaGAGTTGCTTCTCTTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KNSHTGIHCYRQFLSLAVWCLHS*SCFSSR Trigger: CCTGGAAGAGAAGCAACTTCAGCTGTGCAAGCACCA...TACTGCTAGCGATAGAAACTGTCTGTAGCAGTGGATACCTGTATGGGAGTTCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
||
| CDS-3UTR GCA 90 bp | AAGAACTCCCATACAGGTATCCACTGCTACAGACAGTTTCTATCGCTAGCAGTAGTTGCTGTCACTGTGTaGTCGGCTCATGTTGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: KNSHTGIHCYRQFLSLAVVAVTV*SAHVGT Trigger: AGTGCCAACATGAGCCGAGCACACAGTGACAGCAAC...TACTGCTAGCGATAGAAACTGTCTGTAGCAGTGGATACCTGTATGGGAGTTCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
||
| CDS-3UTR GCA 90 bp | CTCCATGATTTCACATTTAGATATAAGAGTCCTACTAGGCACCAACAAAGGTGTTTCCGCGCCTGCCTCTaGTCCTTCAGCTGCCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LHDFTFRYKSPTRHQQRCFRACL*SFSCLL Trigger: CAAGAGGCAGCTGAAGGAGCAGAGGCAGGCGCGGAA...ACACCTTTGTTGGTGCCTAGTAGGACTCTTATATCTAAATGTGAAATCATGGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
||
| CDS-3UTR GCA 90 bp | GGAGGTAGGAGGAAAGTCAGAAATACTACTGTAACTGAAAGCACACATATTCACCACTTGCAGACAGGTTaGTGTCACTGTGTGCTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: GGRRKVRNTTVTESTHIHHLQTG*CHCVLG Trigger: GCCGAGCACACAGTGACAGCAACCTGTCTGCAAGTG...GTGAATATGTGTGCTTTCAGTTACAGTAGTATTTCTGACTTTCCTCCTACCTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
||
| CDS-3UTR GCA 90 bp | AACTTTAAGGCTACAACAGGAAAATTTGATTGGTATCATTGCCTAACTGGAATCCTCTCCTTCCGCGCCTaGCTCTGCTCCTTCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: NFKATTGKFDWYHCLTGILSFRA*LCSFSC Trigger: GCAGCTGAAGGAGCAGAGGCAGGCGCGGAAGGAGAG...GATTCCAGTTAGGCAATGATACCAATCAAATTTTCCTGTTGTAGCCTTAAAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
||
| CDS-3UTR TCA 90 bp | GGATTTTCTTTTACTGAGCATCAACAAACAAATAGTTTGCAAGTGGGTGATGGATTCCACCTGTTGGTGTaGAACCGGTGGAGCGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: GFSFTEHQQTNSLQVGDGFHLLV*NRWSGS Trigger: GGATCCGCTCCACCGGTTTCACACCAACAGGTGGAA...TCCATCACCCACTTGCAAACTATTTGTTTGTTGATGCTCAGTAAAAGAAAATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
||
| CDS-3UTR GCA 90 bp | CTCCATGATTTCACATTTAGATATAAGAGTCCTACTAGGCACCAACAAAGGTGTTTGCGGAAGGCCTTCTaGTGGAGCTTTCGCTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LHDFTFRYKSPTRHQQRCLRKAF*WSFRCL Trigger: CAAGCAGCGAAAGCTCCAGCAGAAGGCCTTCCGCAA...ACACCTTTGTTGGTGCCTAGTAGGACTCTTATATCTAAATGTGAAATCATGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
||
| CDS-3UTR CCA 90 bp | AAGAACTCCCATACAGGTATCCACTGCTACAGACAGTTTCTATCGCTAGCAGTAGGCTCATGTTGGCACTaGAGTTTGAAGCAGAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: KNSHTGIHCYRQFLSLAVGSCWH*SLKQSF Trigger: GAAACTCTGCTTCAAACTCCAGTGCCAACATGAGCC...TACTGCTAGCGATAGAAACTGTCTGTAGCAGTGGATACCTGTATGGGAGTTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
||
| CDS-3UTR CCA 90 bp | CTCCATGATTTCACATTTAGATATAAGAGTCCTACTAGGCACCAACAAAGGTGTCGGAAGGCCTTCTGCTaGAGCTTTCGCTGCTTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LHDFTFRYKSPTRHQQRCRKAFC*SFRCLD Trigger: ATCCAAGCAGCGAAAGCTCCAGCAGAAGGCCTTCCG...ACACCTTTGTTGGTGCCTAGTAGGACTCTTATATCTAAATGTGAAATCATGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
||
| CDS-3UTR TCA 90 bp | CAGCAACCCAAACTAACTTTACCCTCCATCAATTCCCGAGAAGAATTCTTGAAGTCCAACAGAAACGGATaGGAACAGCTCCTCACTACA | + |
|
Preference number: 4 (lower is better) Translates to: QQPKLTLPSINSREEFLKSNRNG*EQLLTT Trigger: TGTAGTGAGGAGCTGTTCTCATCCGTTTCTGTTGGA...CTTCAAGAATTCTTCTCGGGAATTGATGGAGGGTAAAGTTAGTTTGGGTTGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
||
| CDS-3UTR TCA 90 bp | GGAGGTAGGAGGAAAGTCAGAAATACTACTGTAACTGAAAGCACACATATTCACGTACGTGCTGATAGATaGGGAGACATCACTGCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: GGRRKVRNTTVTESTHIHVRADR*GDITAD Trigger: GTCTGCAGTGATGTCTCCTCATCTATCAGCACGTAC...GTGAATATGTGTGCTTTCAGTTACAGTAGTATTTCTGACTTTCCTCCTACCTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
||
| CDS-3UTR TCA 90 bp | GGAGGTAGGAGGAAAGTCAGAAATACTACTGTAACTGAAAGCACACATATTCACGGCCCATCTCAGTACTaGCTTTACGGCTCAGATACT | + |
|
Preference number: 4 (lower is better) Translates to: GGRRKVRNTTVTESTHIHGPSQY*LYGSDT Trigger: AGTATCTGAGCCGTAAAGTCAGTACTGAGATGGGCC...GTGAATATGTGTGCTTTCAGTTACAGTAGTATTTCTGACTTTCCTCCTACCTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
||
| CDS-3UTR TCA 90 bp | AAGAACTCCCATACAGGTATCCACTGCTACAGACAGTTTCTATCGCTAGCAGTATCTGTAGGGGAGATCTaGGCAGAAGGATCAATGATT | + |
|
Preference number: 4 (lower is better) Translates to: KNSHTGIHCYRQFLSLAVSVGEI*AEGSMI Trigger: AATCATTGATCCTTCTGCTCAGATCTCCCCTACAGA...TACTGCTAGCGATAGAAACTGTCTGTAGCAGTGGATACCTGTATGGGAGTTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
||
| CDS-3UTR GCA 90 bp | GGATTTTCTTTTACTGAGCATCAACAAACAAATAGTTTGCAAGTGGGTGATGGAATGAGGAGACATCACTaGAGACACTCCCCTCGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GFSFTEHQQTNSLQVGDGMRRHH*RHSPRG Trigger: TCCCCGAGGGGAGTGTCTGCAGTGATGTCTCCTCAT...TCCATCACCCACTTGCAAACTATTTGTTTGTTGATGCTCAGTAAAAGAAAATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
||
| CDS-3UTR CCA 90 bp | AACTTTAAGGCTACAACAGGAAAATTTGATTGGTATCATTGCCTAACTGGAATCTCTCATAGGAAGTGGTaGCCGACGCCTCGTCGGACA | + |
|
Preference number: 4 (lower is better) Translates to: NFKATTGKFDWYHCLTGISHRKW*PTPRRT Trigger: TGTCCGACGAGGCGTCGGCCACCACTTCCTATGAGA...GATTCCAGTTAGGCAATGATACCAATCAAATTTTCCTGTTGTAGCCTTAAAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
||
| CDS-3UTR CCA 90 bp | TATTTATCTATCCACCTGCTGATGGGTATTCATTTATTGGCTATTGGGAGCAGTGCACATCGCTTCCACTaGCAATGTCACTGCCTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: YLSIHLLMGIHLLAIGSSAHRFH*QCHCLV Trigger: TACCAGGCAGTGACATTGCCAGTGGAAGCGATGTGC...ACTGCTCCCAATAGCCAATAAATGAATACCCATCAGCAGGTGGATAGATAAATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
||
| CDS-3UTR CCA 90 bp | AAGGCTACAACAGGAAAATTTGATTGGTATCATTGCCTAACTGGAATCTCCACTCAGAGTTTCCAACACTaGAGCCACTGCTGCTTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KATTGKFDWYHCLTGISTQSFQH*SHCCLQ Trigger: CTGCAAGCAGCAGTGGCTCCAGTGTTGGAAACTCTG...AGTGGAGATTCCAGTTAGGCAATGATACCAATCAAATTTTCCTGTTGTAGCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
||
| CDS-3UTR TCA 90 bp | GGAGGTAGGAGGAAAGTCAGAAATACTACTGTAACTGAAAGCACACATATTCACTTGGAATACTGGGTATaGCGTCAGAAAGCACATCGC | + |
|
Preference number: 4 (lower is better) Translates to: GGRRKVRNTTVTESTHIHLEYWV*RQKAHR Trigger: GCGATGTGCTTTCTGACGTCATACCCAGTATTCCAA...GTGAATATGTGTGCTTTCAGTTACAGTAGTATTTCTGACTTTCCTCCTACCTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
||
| CDS-3UTR GCA 90 bp | AACTTTAAGGCTACAACAGGAAAATTTGATTGGTATCATTGCCTAACTGGAATCATCCCGAATCCGCTCTaGCGCACTTGCAGACAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: NFKATTGKFDWYHCLTGIIPNPL*RTCRQV Trigger: AACCTGTCTGCAAGTGCGGCAGAGCGGATTCGGGAT...GATTCCAGTTAGGCAATGATACCAATCAAATTTTCCTGTTGTAGCCTTAAAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
||
| CDS-3UTR TCA 90 bp | GGAGGTAGGAGGAAAGTCAGAAATACTACTGTAACTGAAAGCACACATATTCACAGAAACCAGGCAAGGTaGACTTGGAATACTGGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: GGRRKVRNTTVTESTHIHRNQAR*TWNTGY Trigger: ATACCCAGTATTCCAAGTTCACCTTGCCTGGTTTCT...GTGAATATGTGTGCTTTCAGTTACAGTAGTATTTCTGACTTTCCTCCTACCTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
||
| CDS-3UTR GCA 90 bp | GGAGGTAGGAGGAAAGTCAGAAATACTACTGTAACTGAAAGCACACATATTCACACTACATTCAGAGCTTaGGACACTTGTACCACACGA | + |
|
Preference number: 4 (lower is better) Translates to: GGRRKVRNTTVTESTHIHTTFRA*DTCTTR Trigger: TCGTGTGGTACAAGTGTCGCAAGCTCTGAATGTAGT...GTGAATATGTGTGCTTTCAGTTACAGTAGTATTTCTGACTTTCCTCCTACCTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
||
| CDS-3UTR GCA 90 bp | GGAGGTAGGAGGAAAGTCAGAAATACTACTGTAACTGAAAGCACACATATTCACTCACTGCCTGGTAACTaGCACTCAAATTCACTATCT | + |
|
Preference number: 4 (lower is better) Translates to: GGRRKVRNTTVTESTHIHSLPGN*HSNSLS Trigger: AGATAGTGAATTTGAGTGGCAGTTACCAGGCAGTGA...GTGAATATGTGTGCTTTCAGTTACAGTAGTATTTCTGACTTTCCTCCTACCTCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
||
| CDS-3UTR GCA 90 bp | AACTTTAAGGCTACAACAGGAAAATTTGATTGGTATCATTGCCTAACTGGAATCCACTGGCAATGTCACTaGCTGGTAACTGCCACTCAA | + |
|
Preference number: 4 (lower is better) Translates to: NFKATTGKFDWYHCLTGIHWQCH*LVTATQ Trigger: TTGAGTGGCAGTTACCAGGCAGTGACATTGCCAGTG...GATTCCAGTTAGGCAATGATACCAATCAAATTTTCCTGTTGTAGCCTTAAAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
||
| CDS-3UTR GCA 90 bp | AACTTTAAGGCTACAACAGGAAAATTTGATTGGTATCATTGCCTAACTGGAATCCACTCCACTGGTGCTTaGACAGCTGAAGTTGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: NFKATTGKFDWYHCLTGIHSTGA*TAEVAS Trigger: AGAAGCAACTTCAGCTGTGCAAGCACCAGTGGAGTG...GATTCCAGTTAGGCAATGATACCAATCAAATTTTCCTGTTGTAGCCTTAAAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
||
| CDS-3UTR GCA 90 bp | GGAGGTAGGAGGAAAGTCAGAAATACTACTGTAACTGAAAGCACACATATTCACCAAAACATCAACATCTaGTTCATGGTCTTCCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: GGRRKVRNTTVTESTHIHQNINI*FMVFLS Trigger: ACTGAGGAAGACCATGAAGCAGATGTTGATGTTTTG...GTGAATATGTGTGCTTTCAGTTACAGTAGTATTTCTGACTTTCCTCCTACCTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
||
| 3UTR CAA 72 bp | ATCTATGAAAAGGAGACTTATTCACTCCACTGTCAGTaGTGGACAGAAGATAACCAACACTGGAACAAAATC | + |
|
Preference number: 4 (lower is better) Translates to: IYEKETYSLHCQ*WTEDNQHWNKI Trigger: GATTTTGTTCCAGTGTTGGTTATCTTCTGTCCACAACTGACAGTGGAGTGAATAAGTCTCCTTTTCATAGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
||
| 3UTR CAA 72 bp | TATTTATCTATCCACCTGCTGATGGGTATTCATTTATaGGCTATTGGGAGCAGTACTGTAATAGACATGGAA | + |
|
Preference number: 4 (lower is better) Translates to: YLSIHLLMGIHL*AIGSSTVIDME Trigger: TTCCATGTCTATTACAGTACTGCTCCCAATAGCCAATAAATGAATACCCATCAGCAGGTGGATAGATAAATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
||
| 3UTR CAA 72 bp | CTAACTTTACCCTCCATCAATTCCCGAGAAGAATTCTaGAAGACAGTGCTAAGAGGTAATTTGTTAAACCAA | + |
|
Preference number: 4 (lower is better) Translates to: LTLPSINSREEF*KTVLRGNLLNQ Trigger: TTGGTTTAACAAATTACCTCTTAGCACTGTCTTCAAGAATTCTTCTCGGGAATTGATGGAGGGTAAAGTTAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
||
| 3UTR CAA 72 bp | CCTAACTGGAATCTCCACTTGAAACTTAATCCCCACTaGAAACACAACGTTAAGTCTAAAATTTCACTAATG | + |
|
Preference number: 4 (lower is better) Translates to: PNWNLHLKLNPH*KHNVKSKISLM Trigger: CATTAGTGAAATTTTAGACTTAACGTTGTGTTTCAAGTGGGGATTAAGTTTCAAGTGGAGATTCCAGTTAGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
||
| CDS TCA 90 bp | GCGGATCCGTGCGATGGCAGGAGGAGAGCTGGCAGCCGAAGTCGCTaGTGTCCAGGCAGCCAGGTTCCTCGCTGGGGCAGGTGCCCACCC | + |
|
Preference number: 5 (lower is better) Translates to: ADPCDGRRRAGSRSR*CPGSQVPRWGRCPP Trigger: GGGTGGGCACCTGCCCCAGCGAGGAACCTGGCTGCCTGGACATCAGCGACTTCGGCTGCCAGCTCTCCTCCTGCCATCGCACGGATCCGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
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| CDS TCA 90 bp | GCTCCTCACTACATTCAGAGCTTGCGACACTTGTACCACACGAAGTaGGGTTCCACCTGTTGGTGTGAAACCGGTGGAGCGGATCCGTGC | + |
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Preference number: 5 (lower is better) Translates to: APHYIQSLRHLYHTK*GSTCWCETGGADPC Trigger: GCACGGATCCGCTCCACCGGTTTCACACCAACAGGTGGAACCTCACTTCGTGTGGTACAAGTGTCGCAAGCTCTGAATGTAGTGAGGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
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| CDS CCA 90 bp | CCGCACTTGCAGACAGGTTGCTGTCACTGTGTGCTCGGCTCATGTTaGCACTGGAGTTTGAAGCAGAGTTTCCAACACTGGAGCCACTGC | + |
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Preference number: 5 (lower is better) Translates to: PHLQTGCCHCVLGSC*HWSLKQSFQHWSHC Trigger: GCAGTGGCTCCAGTGTTGGAAACTCTGCTTCAAACTCCAGTGCCAACATGAGCCGAGCACACAGTGACAGCAACCTGTCTGCAAGTGCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
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| CDS TCA 90 bp | CAGGTTGCTGTCACTGTGTGCTCGGCTCATGTTGGCACTGGAGTTTaGAGCAGAGTTTCCAACACTGGAGCCACTGCTGCTTGCAGAGCT | + |
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Preference number: 5 (lower is better) Translates to: QVAVTVCSAHVGTGV*SRVSNTGATAACRA Trigger: AGCTCTGCAAGCAGCAGTGGCTCCAGTGTTGGAAACTCTGCTTCAAACTCCAGTGCCAACATGAGCCGAGCACACAGTGACAGCAACCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
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| CDS CCA 90 bp | TTGCAGACAGGTTGCTGTCACTGTGTGCTCGGCTCATGTTGGCACTaGAGTTTGAAGCAGAGTTTCCAACACTGGAGCCACTGCTGCTTG | + |
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Preference number: 5 (lower is better) Translates to: LQTGCCHCVLGSCWH*SLKQSFQHWSHCCL Trigger: CAAGCAGCAGTGGCTCCAGTGTTGGAAACTCTGCTTCAAACTCCAGTGCCAACATGAGCCGAGCACACAGTGACAGCAACCTGTCTGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
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| CDS-3UTR CAA 90 bp | CCCACACTGCCTGTGGCTCTGGAATGGGGCCCAAACACAATTCTAAGGTCTTTTGGAGTAGCAGTCATCTaGATCTCCAACAGAAACGGA | + |
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Preference number: 5 (lower is better) Translates to: PTLPVALEWGPNTILRSFGVAVI*ISNRNG Trigger: TCCGTTTCTGTTGGAGATCAAGATGACTGCTACTCC...AAAAGACCTTAGAATTGTGTTTGGGCCCCATTCCAGAGCCACAGGCAGTGTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
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| CDS-3UTR CAA 90 bp | AAGAACTCCCATACAGGTATCCACTGCTACAGACAGTTTCTATCGCTAGCAGTAGCACTTGCAGACAGGTaGCTGTCACTGTGTGCTCGG | + |
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Preference number: 5 (lower is better) Translates to: KNSHTGIHCYRQFLSLAVALADR*LSLCAR Trigger: CCGAGCACACAGTGACAGCAACCTGTCTGCAAGTGC...TACTGCTAGCGATAGAAACTGTCTGTAGCAGTGGATACCTGTATGGGAGTTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
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| CDS-3UTR CAA 90 bp | CAGCAACCCAAACTAACTTTACCCTCCATCAATTCCCGAGAAGAATTCTTGAAGTGTGCTCGGCTCATGTaGGCACTGGAGTTTGAAGCA | + |
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Preference number: 5 (lower is better) Translates to: QQPKLTLPSINSREEFLKCARLM*ALEFEA Trigger: TGCTTCAAACTCCAGTGCCAACATGAGCCGAGCACA...CTTCAAGAATTCTTCTCGGGAATTGATGGAGGGTAAAGTTAGTTTGGGTTGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
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| CDS-3UTR CAA 90 bp | GGATTTTCTTTTACTGAGCATCAACAAACAAATAGTTTGCAAGTGGGTGATGGATCCGCTCTGCCGCACTaGCAGACAGGTTGCTGTCAC | + |
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Preference number: 5 (lower is better) Translates to: GFSFTEHQQTNSLQVGDGSALPH*QTGCCH Trigger: GTGACAGCAACCTGTCTGCAAGTGCGGCAGAGCGGA...TCCATCACCCACTTGCAAACTATTTGTTTGTTGATGCTCAGTAAAAGAAAATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
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| CDS-3UTR CAA 90 bp | GGATTTTCTTTTACTGAGCATCAACAAACAAATAGTTTGCAAGTGGGTGATGGATCCTTCAGCTGCCTCTaGCGGAAGGCCTTCTGCTGG | + |
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Preference number: 5 (lower is better) Translates to: GFSFTEHQQTNSLQVGDGSFSCL*RKAFCW Trigger: CCAGCAGAAGGCCTTCCGCAAGAGGCAGCTGAAGGA...TCCATCACCCACTTGCAAACTATTTGTTTGTTGATGCTCAGTAAAAGAAAATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
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| CDS-3UTR CAA 90 bp | TTGTTCATGACTTCTGGGAAACTGAGACCCTCACAAAACAAGTTTATAGAGTCTGAGAGCACCTCTTCGTaGAGGAAGAGCCCACTGAGC | + |
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Preference number: 5 (lower is better) Translates to: LFMTSGKLRPSQNKFIESESTSS*RKSPLS Trigger: GCTCAGTGGGCTCTTCCTCAACGAAGAGGTGCTCTC...AGACTCTATAAACTTGTTTTGTGAGGGTCTCAGTTTCCCAGAAGTCATGAACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
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| CDS-3UTR CAA 90 bp | CTCCATGATTTCACATTTAGATATAAGAGTCCTACTAGGCACCAACAAAGGTGTCTTGCACAGCTGAAGTaGCTTCTCTTCCAGGCCTCC | + |
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Preference number: 5 (lower is better) Translates to: LHDFTFRYKSPTRHQQRCLAQLK*LLFQAS Trigger: GGAGGCCTGGAAGAGAAGCAACTTCAGCTGTGCAAG...ACACCTTTGTTGGTGCCTAGTAGGACTCTTATATCTAAATGTGAAATCATGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
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| CDS-3UTR CAA 90 bp | GGAGGTAGGAGGAAAGTCAGAAATACTACTGTAACTGAAAGCACACATATTCACCCACCTGCTCATCATTaGTCATCGCACTCCAAGCAA | + |
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Preference number: 5 (lower is better) Translates to: GGRRKVRNTTVTESTHIHPPAHH*SSHSKQ Trigger: TTGCTTGGAGTGCGATGACAAATGATGAGCAGGTGG...GTGAATATGTGTGCTTTCAGTTACAGTAGTATTTCTGACTTTCCTCCTACCTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
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| CDS-3UTR CAA 90 bp | CTCCATGATTTCACATTTAGATATAAGAGTCCTACTAGGCACCAACAAAGGTGTCACTACATTCAGAGCTaGCGACACTTGTACCACACG | + |
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Preference number: 5 (lower is better) Translates to: LHDFTFRYKSPTRHQQRCHYIQS*RHLYHT Trigger: CGTGTGGTACAAGTGTCGCAAGCTCTGAATGTAGTG...ACACCTTTGTTGGTGCCTAGTAGGACTCTTATATCTAAATGTGAAATCATGGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
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| CDS-3UTR CAA 90 bp | AACTTTAAGGCTACAACAGGAAAATTTGATTGGTATCATTGCCTAACTGGAATCGCTTGGATCGCTTTTTaGAATCCCGAATCCGCTCTG | + |
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Preference number: 5 (lower is better) Translates to: NFKATTGKFDWYHCLTGIAWIAF*NPESAL Trigger: CAGAGCGGATTCGGGATTCAAAAAAGCGATCCAAGC...GATTCCAGTTAGGCAATGATACCAATCAAATTTTCCTGTTGTAGCCTTAAAGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
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| CDS TCA 90 bp | AGACAGTTAAGTTCAATAATGAACTCACTGTCTGTAGGGGAGATCTaGGCAGAAGGATCAATGATTTTAATAATGTCAAGTTGCTCCCGG | + |
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Preference number: 5 (lower is better) Translates to: RQLSSIMNSLSVGEI*AEGSMILIMSSCSR Trigger: CCGGGAGCAACTTGACATTATTAAAATCATTGATCCTTCTGCTCAGATCTCCCCTACAGACAGTGAGTTCATTATTGAACTTAACTGTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
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| CDS TCA 72 bp | TGCGATGGCAGGAGGAGAGCTGGCAGCCGAAGTCGCTaGTGTCCAGGCAGCCAGGTTCCTCGCTGGGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: CDGRRRAGSRSR*CPGSQVPRWGR Trigger: CCTGCCCCAGCGAGGAACCTGGCTGCCTGGACATCAGCGACTTCGGCTGCCAGCTCTCCTCCTGCCATCGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
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| CDS CCA 72 bp | CGGTGGAGCGGATCCGTGCGATGGCAGGAGGAGAGCTaGCAGCCGAAGTCGCTGATGTCCAGGCAGCCAGGT | + |
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Preference number: 6 (lower is better) Translates to: RWSGSVRWQEES*QPKSLMSRQPG Trigger: ACCTGGCTGCCTGGACATCAGCGACTTCGGCTGCCAGCTCTCCTCCTGCCATCGCACGGATCCGCTCCACCG 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
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| CDS GCA 72 bp | TCCACCTGTTGGTGTGAAACCGGTGGAGCGGATCCGTaGGATGGCAGGAGGAGAGCTGGCAGCCGAAGTCGC | + |
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Preference number: 6 (lower is better) Translates to: STCWCETGGADP*DGRRRAGSRSR Trigger: GCGACTTCGGCTGCCAGCTCTCCTCCTGCCATCGCACGGATCCGCTCCACCGGTTTCACACCAACAGGTGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
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| CDS GCA 72 bp | AATCCCGAATCCGCTCTGCCGCACTTGCAGACAGGTTaGTGTCACTGTGTGCTCGGCTCATGTTGGCACTGG | + |
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Preference number: 6 (lower is better) Translates to: NPESALPHLQTG*CHCVLGSCWHW Trigger: CCAGTGCCAACATGAGCCGAGCACACAGTGACAGCAACCTGTCTGCAAGTGCGGCAGAGCGGATTCGGGATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
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| CDS CAA 72 bp | GAATCCCGAATCCGCTCTGCCGCACTTGCAGACAGGTaGCTGTCACTGTGTGCTCGGCTCATGTTGGCACTG | + |
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Preference number: 6 (lower is better) Translates to: ESRIRSAALADR*LSLCARLMLAL Trigger: CAGTGCCAACATGAGCCGAGCACACAGTGACAGCAACCTGTCTGCAAGTGCGGCAGAGCGGATTCGGGATTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
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| CDS CAA 72 bp | TCTTCCTCAGTCACTTTCAAGGAGAGCACCTCTTCGTaGAGGAAGAGCCCACTGAGCCTCTCCTTCCGCGCC | + |
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Preference number: 6 (lower is better) Translates to: SSSVTFKESTSS*RKSPLSLSFRA Trigger: GGCGCGGAAGGAGAGGCTCAGTGGGCTCTTCCTCAACGAAGAGGTGCTCTCCTTGAAAGTGACTGAGGAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
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| CDS CAA 90 bp | GCCGCACTTGCAGACAGGTTGCTGTCACTGTGTGCTCGGCTCATGTaGGCACTGGAGTTTGAAGCAGAGTTTCCAACACTGGAGCCACTG | + |
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Preference number: 6 (lower is better) Translates to: AALADRLLSLCARLM*ALEFEAEFPTLEPL Trigger: CAGTGGCTCCAGTGTTGGAAACTCTGCTTCAAACTCCAGTGCCAACATGAGCCGAGCACACAGTGACAGCAACCTGTCTGCAAGTGCGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
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| CDS CAA 90 bp | ACAGGTTGCTGTCACTGTGTGCTCGGCTCATGTTGGCACTGGAGTTaGAAGCAGAGTTTCCAACACTGGAGCCACTGCTGCTTGCAGAGC | + |
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Preference number: 6 (lower is better) Translates to: TGCCHCVLGSCWHWS*KQSFQHWSHCCLQS Trigger: GCTCTGCAAGCAGCAGTGGCTCCAGTGTTGGAAACTCTGCTTCAAACTCCAGTGCCAACATGAGCCGAGCACACAGTGACAGCAACCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
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| CDS TCA 72 bp | GTCACTGTGTGCTCGGCTCATGTTGGCACTGGAGTTTaGAGCAGAGTTTCCAACACTGGAGCCACTGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: VTVCSAHVGTGV*SRVSNTGATAA Trigger: AGCAGCAGTGGCTCCAGTGTTGGAAACTCTGCTTCAAACTCCAGTGCCAACATGAGCCGAGCACACAGTGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
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| CDS CCA 72 bp | GGTTGCTGTCACTGTGTGCTCGGCTCATGTTGGCACTaGAGTTTGAAGCAGAGTTTCCAACACTGGAGCCAC | + |
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Preference number: 6 (lower is better) Translates to: GCCHCVLGSCWH*SLKQSFQHWSH Trigger: GTGGCTCCAGTGTTGGAAACTCTGCTTCAAACTCCAGTGCCAACATGAGCCGAGCACACAGTGACAGCAACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
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| CDS CAA 72 bp | TGTCACTGTGTGCTCGGCTCATGTTGGCACTGGAGTTaGAAGCAGAGTTTCCAACACTGGAGCCACTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: CHCVLGSCWHWS*KQSFQHWSHCC Trigger: GCAGCAGTGGCTCCAGTGTTGGAAACTCTGCTTCAAACTCCAGTGCCAACATGAGCCGAGCACACAGTGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
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| CDS TCA 72 bp | TACATTCAGAGCTTGCGACACTTGTACCACACGAAGTaGGGTTCCACCTGTTGGTGTGAAACCGGTGGAGCG | + |
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Preference number: 6 (lower is better) Translates to: YIQSLRHLYHTK*GSTCWCETGGA Trigger: CGCTCCACCGGTTTCACACCAACAGGTGGAACCTCACTTCGTGTGGTACAAGTGTCGCAAGCTCTGAATGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
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| CDS CAA 72 bp | GCAGACAGGTTGCTGTCACTGTGTGCTCGGCTCATGTaGGCACTGGAGTTTGAAGCAGAGTTTCCAACACTG | + |
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Preference number: 6 (lower is better) Translates to: ADRLLSLCARLM*ALEFEAEFPTL Trigger: CAGTGTTGGAAACTCTGCTTCAAACTCCAGTGCCAACATGAGCCGAGCACACAGTGACAGCAACCTGTCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
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| CDS GCA 72 bp | CGTCAGAAAGCACATCGCTTCCACTGGCAATGTCACTaGCTGGTAACTGCCACTCAAATTCACTATCTGACC | + |
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Preference number: 6 (lower is better) Translates to: RQKAHRFHWQCH*LVTATQIHYLT Trigger: GGTCAGATAGTGAATTTGAGTGGCAGTTACCAGGCAGTGACATTGCCAGTGGAAGCGATGTGCTTTCTGACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
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| CDS CAA 90 bp | AGGGGAGATCTGAGCAGAAGGATCAATGATTTTAATAATGTCAAGTaGCTCCCGGAGGCCCATCTCAGTACTGACTTTACGGCTCAGATA | + |
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Preference number: 6 (lower is better) Translates to: RGDLSRRINDFNNVK*LPEAHLSTDFTAQI Trigger: TATCTGAGCCGTAAAGTCAGTACTGAGATGGGCCTCCGGGAGCAACTTGACATTATTAAAATCATTGATCCTTCTGCTCAGATCTCCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
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| CDS CAA 90 bp | TCATTTGTCATCGCACTCCAAGCAAGCTCATCTAGATTCCGGTGTTaGTTTTTCTTTTTAGAAACCAGGCAAGGTGAACTTGGAATACTG | + |
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Preference number: 6 (lower is better) Translates to: SFVIALQASSSRFRC*FFFLETRQGELGIL Trigger: CAGTATTCCAAGTTCACCTTGCCTGGTTTCTAAAAAGAAAAACAAACACCGGAATCTAGATGAGCTTGCTTGGAGTGCGATGACAAATGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
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| CDS TCA 72 bp | AGTTCAATAATGAACTCACTGTCTGTAGGGGAGATCTaGGCAGAAGGATCAATGATTTTAATAATGTCAAGT | + |
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Preference number: 6 (lower is better) Translates to: SSIMNSLSVGEI*AEGSMILIMSS Trigger: ACTTGACATTATTAAAATCATTGATCCTTCTGCTCAGATCTCCCCTACAGACAGTGAGTTCATTATTGAACT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047852.8 |
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