RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAM193B (Mus musculus)

Ensembl gene IDs: ENSMUSG00000021495

Ensembl transcript IDs: ENSMUST00000021957.8, ENSMUST00000224249.2, ENSMUST00000225240.3

Found 338 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGCCCAGCCCCGGGCTCTGAGTGCAGGCAGCGTAGCACCAGGAAGTaGCTTTGCCGAGGTCCTCACAGGCCCCAGCACAGCATGGCGTCC +
Preference number: 1 (lower is better)
Translates to: SPAPGSECRQRSTRK*LCRGPHRPQHSMAS
Trigger: GGACGCCATGCTGTGCTGGGGCCTGTGAGGACCTCGGCAAAGCCACTTCCTGGTGCTACGCTGCCTGCACTCAGAGCCCGGGGCTGGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
3UTR GCA 90 bp GCCCCGGGCTCTGAGTGCAGGCAGCGTAGCACCAGGAAGTGGCTTTaGCGAGGTCCTCACAGGCCCCAGCACAGCATGGCGTCCATTCAG +
Preference number: 1 (lower is better)
Translates to: APGSECRQRSTRKWL*RGPHRPQHSMASIQ
Trigger: CTGAATGGACGCCATGCTGTGCTGGGGCCTGTGAGGACCTCGGCAAAGCCACTTCCTGGTGCTACGCTGCCTGCACTCAGAGCCCGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
3UTR CCA 90 bp GCCCCAGCACAGCATGGCGTCCATTCAGCTTTTGGTTGGTCAGGGTaGTGGGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGA +
Preference number: 1 (lower is better)
Translates to: APAQHGVHSAFGWSG*WEQDRSRQVAGHVR
Trigger: TCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCCACCACCCTGACCAACCAAAAGCTGAATGGACGCCATGCTGTGCTGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
3UTR CCA 90 bp TCCTCACAGGCCCCAGCACAGCATGGCGTCCATTCAGCTTTTGGTTaGTCAGGGTGGTGGGAGCAGGACAGGTCAAGACAGGTGGCAGGG +
Preference number: 1 (lower is better)
Translates to: SSQAPAQHGVHSAFG*SGWWEQDRSRQVAG
Trigger: CCCTGCCACCTGTCTTGACCTGTCCTGCTCCCACCACCCTGACCAACCAAAAGCTGAATGGACGCCATGCTGTGCTGGGGCCTGTGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
3UTR CCA 90 bp GAGGTCCTCACAGGCCCCAGCACAGCATGGCGTCCATTCAGCTTTTaGTTGGTCAGGGTGGTGGGAGCAGGACAGGTCAAGACAGGTGGC +
Preference number: 1 (lower is better)
Translates to: EVLTGPSTAWRPFSF*LVRVVGAGQVKTGG
Trigger: GCCACCTGTCTTGACCTGTCCTGCTCCCACCACCCTGACCAACCAAAAGCTGAATGGACGCCATGCTGTGCTGGGGCCTGTGAGGACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
3UTR CCA 90 bp CTTTTGGTTGGTCAGGGTGGTGGGAGCAGGACAGGTCAAGACAGGTaGCAGGGCACGTCAGAACTACATCTGCAGCTTGAGCTGCGGCCT +
Preference number: 1 (lower is better)
Translates to: LLVGQGGGSRTGQDR*QGTSELHLQLELRP
Trigger: AGGCCGCAGCTCAAGCTGCAGATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCCACCACCCTGACCAACCAAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
3UTR CAA 90 bp CGAGGTCCTCACAGGCCCCAGCACAGCATGGCGTCCATTCAGCTTTaGGTTGGTCAGGGTGGTGGGAGCAGGACAGGTCAAGACAGGTGG +
Preference number: 2 (lower is better)
Translates to: RGPHRPQHSMASIQL*VGQGGGSRTGQDRW
Trigger: CCACCTGTCTTGACCTGTCCTGCTCCCACCACCCTGACCAACCAAAAGCTGAATGGACGCCATGCTGTGCTGGGGCCTGTGAGGACCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
3UTR-3UTR TCA 90 bp GGTGGGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCTGGCTGCGGCCTTGAGGTaGCCTGGAGACGTCAACCTG +
Preference number: 2 (lower is better)
Translates to: GGSRTGQDRWQGTSELHLAAALR*PGDVNL
Trigger: CAGGTTGACGTCTCCAGGTCACCTCAAGGCCGCAGC...CAGATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
3UTR-3UTR CCA 90 bp GCCCCGGGCTCTGAGTGCAGGCAGCGTAGCACCAGGAAGTGGCTTTGCCGAGGTCGTCCATTCAGCTTTTaGTTGGTCAGGGTGGTGGGA +
Preference number: 2 (lower is better)
Translates to: APGSECRQRSTRKWLCRGRPFSF*LVRVVG
Trigger: TCCCACCACCCTGACCAACCAAAAGCTGAATGGACG...ACCTCGGCAAAGCCACTTCCTGGTGCTACGCTGCCTGCACTCAGAGCCCGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
3UTR-3UTR TCA 90 bp AAACCAAACACAAAGAGAGCAGGTTTGGGCCAGCAGTCCCACCAGCCCTTGCTCGCTGCGGCCTTGAGGTaGCCTGGAGACGTCAACCTG +
Preference number: 2 (lower is better)
Translates to: KPNTKRAGLGQQSHQPLLAAALR*PGDVNL
Trigger: CAGGTTGACGTCTCCAGGTCACCTCAAGGCCGCAGC...GAGCAAGGGCTGGTGGGACTGCTGGCCCAAACCTGCTCTCTTTGTGTTTGGTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
3UTR-3UTR CCA 90 bp AACACAAAGAGAGCAGGTTTGGGCCAGCAGTCCCACCAGCCCTTGCTCACAGGCCGTAGCACCAGGAAGTaGCTTTGCCGAGGTCCTCAC +
Preference number: 2 (lower is better)
Translates to: NTKRAGLGQQSHQPLLTGRSTRK*LCRGPH
Trigger: GTGAGGACCTCGGCAAAGCCACTTCCTGGTGCTACG...GCCTGTGAGCAAGGGCTGGTGGGACTGCTGGCCCAAACCTGCTCTCTTTGTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
3UTR-3UTR CCA 90 bp AAACCAAACACAAAGAGAGCAGGTTTGGGCCAGCAGTCCCACCAGCCCTTGCTCCGTAGCACCAGGAAGTaGCTTTGCCGAGGTCCTCAC +
Preference number: 2 (lower is better)
Translates to: KPNTKRAGLGQQSHQPLLRSTRK*LCRGPH
Trigger: GTGAGGACCTCGGCAAAGCCACTTCCTGGTGCTACG...GAGCAAGGGCTGGTGGGACTGCTGGCCCAAACCTGCTCTCTTTGTGTTTGGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
3UTR-3UTR CCA 90 bp CAAACACAAAGAGAGCAGGTTTGGGCCAGCAGTCCCACCAGCCCTTGCTCACAGCGTCCATTCAGCTTTTaGTTGGTCAGGGTGGTGGGA +
Preference number: 2 (lower is better)
Translates to: QTQREQVWASSPTSPCSQRPFSF*LVRVVG
Trigger: TCCCACCACCCTGACCAACCAAAAGCTGAATGGACG...CTGTGAGCAAGGGCTGGTGGGACTGCTGGCCCAAACCTGCTCTCTTTGTGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
3UTR CCA 72 bp CCGGGCTCTGAGTGCAGGCAGCGTAGCACCAGGAAGTaGCTTTGCCGAGGTCCTCACAGGCCCCAGCACAGC +
Preference number: 3 (lower is better)
Translates to: PGSECRQRSTRK*LCRGPHRPQHS
Trigger: GCTGTGCTGGGGCCTGTGAGGACCTCGGCAAAGCCACTTCCTGGTGCTACGCTGCCTGCACTCAGAGCCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
3UTR GCA 72 bp TCTGAGTGCAGGCAGCGTAGCACCAGGAAGTGGCTTTaGCGAGGTCCTCACAGGCCCCAGCACAGCATGGCG +
Preference number: 3 (lower is better)
Translates to: SECRQRSTRKWL*RGPHRPQHSMA
Trigger: CGCCATGCTGTGCTGGGGCCTGTGAGGACCTCGGCAAAGCCACTTCCTGGTGCTACGCTGCCTGCACTCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
3UTR-3UTR CAA 90 bp GCCCCGGGCTCTGAGTGCAGGCAGCGTAGCACCAGGAAGTGGCTTTGCCGAGGTGCGTCCATTCAGCTTTaGGTTGGTCAGGGTGGTGGG +
Preference number: 3 (lower is better)
Translates to: APGSECRQRSTRKWLCRGASIQL*VGQGGG
Trigger: CCCACCACCCTGACCAACCAAAAGCTGAATGGACGC...ACCTCGGCAAAGCCACTTCCTGGTGCTACGCTGCCTGCACTCAGAGCCCGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
3UTR GCA 72 bp GGCAGGGCACGTCAGAACTACATCTGCAGCTTGAGCTaGGGCCTTGAGGTGACCTGGAGACGTCAACCTGGG +
Preference number: 3 (lower is better)
Translates to: GRARQNYICSLS*GLEVTWRRQPG
Trigger: CCCAGGTTGACGTCTCCAGGTCACCTCAAGGCCGCAGCTCAAGCTGCAGATGTAGTTCTGACGTGCCCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
3UTR CCA 72 bp GGCTTTGCCGAGGTCCTCACAGGCCCCAGCACAGCATaGCGTCCATTCAGCTTTTGGTTGGTCAGGGTGGTG +
Preference number: 3 (lower is better)
Translates to: GFAEVLTGPSTA*RPFSFWLVRVV
Trigger: CACCACCCTGACCAACCAAAAGCTGAATGGACGCCATGCTGTGCTGGGGCCTGTGAGGACCTCGGCAAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
3UTR CCA 72 bp GGTCAGGGTGGTGGGAGCAGGACAGGTCAAGACAGGTaGCAGGGCACGTCAGAACTACATCTGCAGCTTGAG +
Preference number: 3 (lower is better)
Translates to: GQGGGSRTGQDR*QGTSELHLQLE
Trigger: CTCAAGCTGCAGATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCCACCACCCTGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
3UTR CCA 72 bp CAGCATGGCGTCCATTCAGCTTTTGGTTGGTCAGGGTaGTGGGAGCAGGACAGGTCAAGACAGGTGGCAGGG +
Preference number: 3 (lower is better)
Translates to: QHGVHSAFGWSG*WEQDRSRQVAG
Trigger: CCCTGCCACCTGTCTTGACCTGTCCTGCTCCCACCACCCTGACCAACCAAAAGCTGAATGGACGCCATGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
3UTR CCA 72 bp GCCCCAGCACAGCATGGCGTCCATTCAGCTTTTGGTTaGTCAGGGTGGTGGGAGCAGGACAGGTCAAGACAG +
Preference number: 3 (lower is better)
Translates to: APAQHGVHSAFG*SGWWEQDRSRQ
Trigger: CTGTCTTGACCTGTCCTGCTCCCACCACCCTGACCAACCAAAAGCTGAATGGACGCCATGCTGTGCTGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CCA 90 bp AGCCCAGCCCCGGGCTCTGAGTGCAGGCAGCGTAGCACCAGGAAGTGGCTTTGCCATGGCCCCGAGGGGTaGGTGGCAGTGGCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: SPAPGSECRQRSTRKWLCHGPEG*VAVAAA
Trigger: GGCTGCTGCCACTGCCACCCACCCCTCGGGGCCATG...GCAAAGCCACTTCCTGGTGCTACGCTGCCTGCACTCAGAGCCCGGGGCTGGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CCA 90 bp AGCCCAGCCCCGGGCTCTGAGTGCAGGCAGCGTAGCACCAGGAAGTGGCTTTGCAAGGTGCCACTGGGGTaGTGGGCAGCGGGGGTGGGT +
Preference number: 4 (lower is better)
Translates to: SPAPGSECRQRSTRKWLCKVPLG*WAAGVG
Trigger: ACCCACCCCCGCTGCCCACCACCCCAGTGGCACCTT...GCAAAGCCACTTCCTGGTGCTACGCTGCCTGCACTCAGAGCCCGGGGCTGGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR GCA 90 bp AGCCCAGCCCCGGGCTCTGAGTGCAGGCAGCGTAGCACCAGGAAGTGGCTTTGCCTGAGCGGGGAAAGGTaGCACTGGGGTGGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: SPAPGSECRQRSTRKWLCLSGER*HWGGGQ
Trigger: CTGCCCACCACCCCAGTGGCACCTTTCCCCGCTCAG...GCAAAGCCACTTCCTGGTGCTACGCTGCCTGCACTCAGAGCCCGGGGCTGGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CCA 90 bp AGCCCAGCCCCGGGCTCTGAGTGCAGGCAGCGTAGCACCAGGAAGTGGCTTTGCCCCGCTTGGCAGCCCTaGCGCTGTTGGGGACTTTGG +
Preference number: 4 (lower is better)
Translates to: SPAPGSECRQRSTRKWLCPAWQP*RCWGLW
Trigger: CCAAAGTCCCCAACAGCGCCAGGGCTGCCAAGCGGG...GCAAAGCCACTTCCTGGTGCTACGCTGCCTGCACTCAGAGCCCGGGGCTGGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000021957.8
CDS-3UTR CCA 90 bp AGCCCAGCCCCGGGCTCTGAGTGCAGGCAGCGTAGCACCAGGAAGTGGCTTTGCGGGAACCTGAGGGCCTaGAGCCAGCTTGGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: SPAPGSECRQRSTRKWLCGNLRA*SQLGLF
Trigger: GAAGAGCCCAAGCTGGCTCCAGGCCCTCAGGTTCCC...GCAAAGCCACTTCCTGGTGCTACGCTGCCTGCACTCAGAGCCCGGGGCTGGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225240.3
CDS-3UTR GCA 90 bp GCCCCGGGCTCTGAGTGCAGGCAGCGTAGCACCAGGAAGTGGCTTTGCCGAGGTGCCCTCTCCAGGTTCTaGACCACTGCCCACTTTGGC +
Preference number: 4 (lower is better)
Translates to: APGSECRQRSTRKWLCRGALSRF*TTAHFG
Trigger: GCCAAAGTGGGCAGTGGTGCAGAACCTGGAGAGGGC...ACCTCGGCAAAGCCACTTCCTGGTGCTACGCTGCCTGCACTCAGAGCCCGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR GCA 90 bp GCCCCGGGCTCTGAGTGCAGGCAGCGTAGCACCAGGAAGTGGCTTTGCCGAGGTGAGGCTGACTTCTCCTaGTTGTTTCGGCTCCGGCGG +
Preference number: 4 (lower is better)
Translates to: APGSECRQRSTRKWLCRGEADFS*LFRLRR
Trigger: CCGCCGGAGCCGAAACAAGCAGGAGAAGTCAGCCTC...ACCTCGGCAAAGCCACTTCCTGGTGCTACGCTGCCTGCACTCAGAGCCCGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CCA 90 bp CCTCACAGGCCCCAGCACAGCATGGCGTCCATTCAGCTTTTGGTTGGTCAGGGTGGGGAAAGGTGCCACTaGGGTGGTGGGCAGCGGGGG +
Preference number: 4 (lower is better)
Translates to: PHRPQHSMASIQLLVGQGGERCH*GGGQRG
Trigger: CCCCCGCTGCCCACCACCCCAGTGGCACCTTTCCCC...ACCCTGACCAACCAAAAGCTGAATGGACGCCATGCTGTGCTGGGGCCTGTGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CCA 90 bp GGTGGGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCTGCATGGCCCCGAGGGGTaGGTGGCAGTGGCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: GGSRTGQDRWQGTSELHLHGPEG*VAVAAA
Trigger: GGCTGCTGCCACTGCCACCCACCCCTCGGGGCCATG...CAGATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CCA 90 bp AGCCCAGCCCCGGGCTCTGAGTGCAGGCAGCGTAGCACCAGGAAGTGGCTTTGCAGGCATCTTCAGGAGTaGCATGCTGGTGGAGGGCGG +
Preference number: 4 (lower is better)
Translates to: SPAPGSECRQRSTRKWLCRHLQE*HAGGGR
Trigger: CCGCCCTCCACCAGCATGCCACTCCTGAAGATGCCT...GCAAAGCCACTTCCTGGTGCTACGCTGCCTGCACTCAGAGCCCGGGGCTGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CCA 90 bp GGCCCCAGCACAGCATGGCGTCCATTCAGCTTTTGGTTGGTCAGGGTGGTGGGATGCCCGCTGCAGGGGTaGCTGCACCCCGAGAGTGGT +
Preference number: 4 (lower is better)
Translates to: GPSTAWRPFSFWLVRVVGCPLQG*LHPESG
Trigger: ACCACTCTCGGGGTGCAGCCACCCCTGCAGCGGGCA...TCCCACCACCCTGACCAACCAAAAGCTGAATGGACGCCATGCTGTGCTGGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CCA 90 bp GCCCCGGGCTCTGAGTGCAGGCAGCGTAGCACCAGGAAGTGGCTTTGCCGAGGTTCATCCACATCTCGGTaGTCCACCGCAGGCTCCCCA +
Preference number: 4 (lower is better)
Translates to: APGSECRQRSTRKWLCRGSSTSR*STAGSP
Trigger: TGGGGAGCCTGCGGTGGACCACCGAGATGTGGATGA...ACCTCGGCAAAGCCACTTCCTGGTGCTACGCTGCCTGCACTCAGAGCCCGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021957.8
CDS-3UTR CCA 90 bp AGCCCAGCCCCGGGCTCTGAGTGCAGGCAGCGTAGCACCAGGAAGTGGCTTTGCCTGCGGCCCTTGCCTTaGGACAAGCTCTGTGGCCTT +
Preference number: 4 (lower is better)
Translates to: SPAPGSECRQRSTRKWLCLRPLP*DKLCGL
Trigger: AAGGCCACAGAGCTTGTCCCAAGGCAAGGGCCGCAG...GCAAAGCCACTTCCTGGTGCTACGCTGCCTGCACTCAGAGCCCGGGGCTGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR GCA 90 bp AACACAAAGAGAGCAGGTTTGGGCCAGCAGTCCCACCAGCCCTTGCTCACAGGCCACCACAGTGCCCGCTaGAGTGCCCGCTGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: NTKRAGLGQQSHQPLLTGHHSAR*SARCRG
Trigger: ACCCCTGCAGCGGGCACTGCAGCGGGCACTGTGGTG...GCCTGTGAGCAAGGGCTGGTGGGACTGCTGGCCCAAACCTGCTCTCTTTGTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR GCA 90 bp CTCACAGGCCCCAGCACAGCATGGCGTCCATTCAGCTTTTGGTTGGTCAGGGTGCACCACAGTGCCCGCTaGAGTGCCCGCTGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: LTGPSTAWRPFSFWLVRVHHSAR*SARCRG
Trigger: ACCCCTGCAGCGGGCACTGCAGCGGGCACTGTGGTG...CACCCTGACCAACCAAAAGCTGAATGGACGCCATGCTGTGCTGGGGCCTGTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR GCA 90 bp AGCCCAGCCCCGGGCTCTGAGTGCAGGCAGCGTAGCACCAGGAAGTGGCTTTGCCAGGTTCTGCACCACTaGCCACTTTGGCAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: SPAPGSECRQRSTRKWLCQVLHH*PLWQAL
Trigger: CAGAGCCTGCCAAAGTGGGCAGTGGTGCAGAACCTG...GCAAAGCCACTTCCTGGTGCTACGCTGCCTGCACTCAGAGCCCGGGGCTGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR GCA 90 bp ACCAGGAAGTGGCTTTGCCGAGGTCCTCACAGGCCCCAGCACAGCATGGCGTCCGCCCTCTCCAGGTTCTaGACCACTGCCCACTTTGGC +
Preference number: 4 (lower is better)
Translates to: TRKWLCRGPHRPQHSMASALSRF*TTAHFG
Trigger: GCCAAAGTGGGCAGTGGTGCAGAACCTGGAGAGGGC...GGACGCCATGCTGTGCTGGGGCCTGTGAGGACCTCGGCAAAGCCACTTCCTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR GCA 90 bp ACCAGGAAGTGGCTTTGCCGAGGTCCTCACAGGCCCCAGCACAGCATGGCGTCCCAAGCTCTGTGGCCTTaGTGGACCAGGGGTCTGCTC +
Preference number: 4 (lower is better)
Translates to: TRKWLCRGPHRPQHSMASQALWP*WTRGLL
Trigger: GAGCAGACCCCTGGTCCAGCAAGGCCACAGAGCTTG...GGACGCCATGCTGTGCTGGGGCCTGTGAGGACCTCGGCAAAGCCACTTCCTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR GCA 90 bp CCTCACAGGCCCCAGCACAGCATGGCGTCCATTCAGCTTTTGGTTGGTCAGGGTTTCGGCTCCGGCGGCTaGGGCCCTTGCCTTGGGACA +
Preference number: 4 (lower is better)
Translates to: PHRPQHSMASIQLLVGQGFGSGG*GPCLGT
Trigger: TGTCCCAAGGCAAGGGCCGCAGCCGCCGGAGCCGAA...ACCCTGACCAACCAAAAGCTGAATGGACGCCATGCTGTGCTGGGGCCTGTGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR GCA 90 bp GTGGTGGGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCTTCGGCTCCGGCGGCTaGGGCCCTTGCCTTGGGACA +
Preference number: 4 (lower is better)
Translates to: VVGAGQVKTGGRARQNYIFGSGG*GPCLGT
Trigger: TGTCCCAAGGCAAGGGCCGCAGCCGCCGGAGCCGAA...GATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCCACCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CCA 90 bp CTCACAGGCCCCAGCACAGCATGGCGTCCATTCAGCTTTTGGTTGGTCAGGGTGCCCAAGCGAGCTGCCTaGCACAGCCCCGCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: LTGPSTAWRPFSFWLVRVPKRAA*HSPAGV
Trigger: CACTCCAGCGGGGCTGTGCCAGGCAGCTCGCTTGGG...CACCCTGACCAACCAAAAGCTGAATGGACGCCATGCTGTGCTGGGGCCTGTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CCA 90 bp GCCCCGGGCTCTGAGTGCAGGCAGCGTAGCACCAGGAAGTGGCTTTGCCGAGGTGTAAGGTCTGAGTGCTaGTGGTGCTCCGAGACAGGG +
Preference number: 4 (lower is better)
Translates to: APGSECRQRSTRKWLCRGVRSEC*WCSETG
Trigger: CCCTGTCTCGGAGCACCACCAGCACTCAGACCTTAC...ACCTCGGCAAAGCCACTTCCTGGTGCTACGCTGCCTGCACTCAGAGCCCGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CCA 90 bp GGGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCTGCAGTGCCCGCTGCAGGGGTaGCTGCACCCCGAGAGTGGT +
Preference number: 4 (lower is better)
Translates to: GSRTGQDRWQGTSELHLQCPLQG*LHPESG
Trigger: ACCACTCTCGGGGTGCAGCCACCCCTGCAGCGGGCA...CTGCAGATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CCA 90 bp TGGGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCTGCATGTGCCGGGCCCGCTTaGCAGCCCTGGCGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: WEQDRSRQVAGHVRTTSACAGPA*QPWRCW
Trigger: CCAACAGCGCCAGGGCTGCCAAGCGGGCCCGGCACA...TGCAGATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021957.8
CDS-3UTR TCA 90 bp ACAGGCCCCAGCACAGCATGGCGTCCATTCAGCTTTTGGTTGGTCAGGGTGGTGGTGCTAGGGAGCGGCTaGGAGCTCGGTGGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: TGPSTAWRPFSFWLVRVVVLGSG*ELGGGR
Trigger: TCTCCCACCACCGAGCTCTCAGCCGCTCCCTAGCAC...CACCACCCTGACCAACCAAAAGCTGAATGGACGCCATGCTGTGCTGGGGCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR TCA 90 bp CCTCACAGGCCCCAGCACAGCATGGCGTCCATTCAGCTTTTGGTTGGTCAGGGTGTGCTAGGGAGCGGCTaGGAGCTCGGTGGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: PHRPQHSMASIQLLVGQGVLGSG*ELGGGR
Trigger: TCTCCCACCACCGAGCTCTCAGCCGCTCCCTAGCAC...ACCCTGACCAACCAAAAGCTGAATGGACGCCATGCTGTGCTGGGGCCTGTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR TCA 90 bp AGCCCAGCCCCGGGCTCTGAGTGCAGGCAGCGTAGCACCAGGAAGTGGCTTTGCATGTCAGGCCGTTTCTaGGAGGAGCCACTGAGGTCT +
Preference number: 4 (lower is better)
Translates to: SPAPGSECRQRSTRKWLCMSGRF*EEPLRS
Trigger: AGACCTCAGTGGCTCCTCTCAGAAACGGCCTGACAT...GCAAAGCCACTTCCTGGTGCTACGCTGCCTGCACTCAGAGCCCGGGGCTGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR TCA 90 bp CAGGGTGGTGGGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTATTGGGGCTGTCAGCCTaGATTGGTCCTGGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: QGGGSRTGQDRWQGTSELLGLSA*IGPGRL
Trigger: GAGCCGGCCAGGACCAATTCAGGCTGACAGCCCCAA...TAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCCACCACCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR GCA 90 bp GCCCCGGGCTCTGAGTGCAGGCAGCGTAGCACCAGGAAGTGGCTTTGCCGAGGTGCAGTAAGGTCTGAGTaGTGGTGGTGCTCCGAGACA +
Preference number: 4 (lower is better)
Translates to: APGSECRQRSTRKWLCRGAVRSE*WWCSET
Trigger: TGTCTCGGAGCACCACCAGCACTCAGACCTTACTGC...ACCTCGGCAAAGCCACTTCCTGGTGCTACGCTGCCTGCACTCAGAGCCCGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR GCA 90 bp AGCCCAGCCCCGGGCTCTGAGTGCAGGCAGCGTAGCACCAGGAAGTGGCTTTGCCAAATTTGTGCCCCTTaGACCCAGGGTCCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: SPAPGSECRQRSTRKWLCQICAP*TQGPCC
Trigger: ACAGCAGGGACCCTGGGTGCAAGGGGCACAAATTTG...GCAAAGCCACTTCCTGGTGCTACGCTGCCTGCACTCAGAGCCCGGGGCTGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR GCA 90 bp GCCCCGGGCTCTGAGTGCAGGCAGCGTAGCACCAGGAAGTGGCTTTGCCGAGGTCTGTGTGCAAATTTGTaGCCCTTGCACCCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: APGSECRQRSTRKWLCRGLCANL*PLHPGS
Trigger: GGACCCTGGGTGCAAGGGGCACAAATTTGCACACAG...ACCTCGGCAAAGCCACTTCCTGGTGCTACGCTGCCTGCACTCAGAGCCCGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR GCA 90 bp TGGGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCTGCAGGATCCCGCCCAGGGTaGCCCCCTTCATGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: WEQDRSRQVAGHVRTTSAGSRPG*PPSWAA
Trigger: AGCTGCCCATGAAGGGGGGCACCCTGGGCGGGATCC...TGCAGATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000021957.8
CDS-3UTR GCA 90 bp ACCAGGAAGTGGCTTTGCCGAGGTCCTCACAGGCCCCAGCACAGCATGGCGTCCCAGGTTCTGCACCACTaGCCACTTTGGCAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: TRKWLCRGPHRPQHSMASQVLHH*PLWQAL
Trigger: CAGAGCCTGCCAAAGTGGGCAGTGGTGCAGAACCTG...GGACGCCATGCTGTGCTGGGGCCTGTGAGGACCTCGGCAAAGCCACTTCCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR GCA 90 bp GTGGTGGGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCCTGCTCCAGAGTCCGTaGCTTGGCCCCACCTGGCCA +
Preference number: 4 (lower is better)
Translates to: VVGAGQVKTGGRARQNYILLQSP*LGPTWP
Trigger: TGGCCAGGTGGGGCCAAGGCACGGACTCTGGAGCAG...GATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCCACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR GCA 90 bp GGTGGGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCTGCTGCTCCAGAGTCCGTaGCTTGGCCCCACCTGGCCA +
Preference number: 4 (lower is better)
Translates to: GGSRTGQDRWQGTSELHLLLQSP*LGPTWP
Trigger: TGGCCAGGTGGGGCCAAGGCACGGACTCTGGAGCAG...CAGATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CCA 90 bp TGGGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCTGCAAAGGTGCCACTGGGGTaGTGGGCAGCGGGGGTGGGT +
Preference number: 4 (lower is better)
Translates to: WEQDRSRQVAGHVRTTSAKVPLG*WAAGVG
Trigger: ACCCACCCCCGCTGCCCACCACCCCAGTGGCACCTT...TGCAGATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CCA 90 bp AGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCTGCAGCTTGAGGGGGAAAGGTGCCACTaGGGTGGTGGGCAGCGGGGG +
Preference number: 4 (lower is better)
Translates to: RTGQDRWQGTSELHLQLEGERCH*GGGQRG
Trigger: CCCCCGCTGCCCACCACCCCAGTGGCACCTTTCCCC...CTCAAGCTGCAGATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CCA 90 bp GGCCCCAGCACAGCATGGCGTCCATTCAGCTTTTGGTTGGTCAGGGTGGTGGGAGGAGTGGCATGCTGGTaGAGGGCGGATGAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: GPSTAWRPFSFWLVRVVGGVACW*RADEGS
Trigger: AGAGCCCTCATCCGCCCTCCACCAGCATGCCACTCC...TCCCACCACCCTGACCAACCAAAAGCTGAATGGACGCCATGCTGTGCTGGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CCA 90 bp CTCACAGGCCCCAGCACAGCATGGCGTCCATTCAGCTTTTGGTTGGTCAGGGTGCATCGCGGGGGTGGGTaGAGGACGAGGTGCAAGAGC +
Preference number: 4 (lower is better)
Translates to: LTGPSTAWRPFSFWLVRVHRGGG*RTRCKS
Trigger: GCTCTTGCACCTCGTCCTCCACCCACCCCCGCGATG...CACCCTGACCAACCAAAAGCTGAATGGACGCCATGCTGTGCTGGGGCCTGTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CCA 90 bp GGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCTGCAGCCATCGCGGGGGTGGGTaGAGGACGAGGTGCAAGAGC +
Preference number: 4 (lower is better)
Translates to: GAGQVKTGGRARQNYICSHRGGG*RTRCKS
Trigger: GCTCTTGCACCTCGTCCTCCACCCACCCCCGCGATG...GCTGCAGATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CCA 90 bp AACACAAAGAGAGCAGGTTTGGGCCAGCAGTCCCACCAGCCCTTGCTCACAGGCCAGCCCTGGCGCTGTTaGGGACTTTGGGCTCCGTGC +
Preference number: 4 (lower is better)
Translates to: NTKRAGLGQQSHQPLLTGQPWRC*GLWAPC
Trigger: GCACGGAGCCCAAAGTCCCCAACAGCGCCAGGGCTG...GCCTGTGAGCAAGGGCTGGTGGGACTGCTGGCCCAAACCTGCTCTCTTTGTGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021957.8
CDS-3UTR CCA 90 bp AGCCCAGCCCCGGGCTCTGAGTGCAGGCAGCGTAGCACCAGGAAGTGGCTTTGCGCAGGCCTTGGCTCCTaGCTTCCAGAAACACGATTC +
Preference number: 4 (lower is better)
Translates to: SPAPGSECRQRSTRKWLCAGLGS*LPETRF
Trigger: GAATCGTGTTTCTGGAAGCCAGGAGCCAAGGCCTGC...GCAAAGCCACTTCCTGGTGCTACGCTGCCTGCACTCAGAGCCCGGGGCTGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CCA 90 bp GGTGGGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCTGAGCCTGAATTGGTCCTaGCCGGCTCCCCGGACTGCC +
Preference number: 4 (lower is better)
Translates to: GGSRTGQDRWQGTSELHLSLNWS*PAPRTA
Trigger: GGCAGTCCGGGGAGCCGGCCAGGACCAATTCAGGCT...CAGATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CCA 90 bp CTCACAGGCCCCAGCACAGCATGGCGTCCATTCAGCTTTTGGTTGGTCAGGGTGAGCCTGAATTGGTCCTaGCCGGCTCCCCGGACTGCC +
Preference number: 4 (lower is better)
Translates to: LTGPSTAWRPFSFWLVRVSLNWS*PAPRTA
Trigger: GGCAGTCCGGGGAGCCGGCCAGGACCAATTCAGGCT...CACCCTGACCAACCAAAAGCTGAATGGACGCCATGCTGTGCTGGGGCCTGTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR TCA 90 bp ACAGGCCCCAGCACAGCATGGCGTCCATTCAGCTTTTGGTTGGTCAGGGTGGTGTTGGGGCTGTCAGCCTaGATTGGTCCTGGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: TGPSTAWRPFSFWLVRVVLGLSA*IGPGRL
Trigger: GAGCCGGCCAGGACCAATTCAGGCTGACAGCCCCAA...CACCACCCTGACCAACCAAAAGCTGAATGGACGCCATGCTGTGCTGGGGCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR GCA 90 bp CAGGGTGGTGGGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACAAGCTCTGTGGCCTTaGTGGACCAGGGGTCTGCTC +
Preference number: 4 (lower is better)
Translates to: QGGGSRTGQDRWQGTSELQALWP*WTRGLL
Trigger: GAGCAGACCCCTGGTCCAGCAAGGCCACAGAGCTTG...TAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCCACCACCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR GCA 90 bp TGGGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCTGCAGGCGGCTGCGGCCCTTaGCTTGGGACAAGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: WEQDRSRQVAGHVRTTSAGGCGP*LGTSSV
Trigger: CACAGAGCTTGTCCCAAGGCAAGGGCCGCAGCCGCC...TGCAGATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR GCA 90 bp TGGTGGGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCTGGCGGCTGCGGCCCTTaGCTTGGGACAAGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: WWEQDRSRQVAGHVRTTSGGCGP*LGTSSV
Trigger: CACAGAGCTTGTCCCAAGGCAAGGGCCGCAGCCGCC...AGATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCCACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CCA 90 bp GTGGTGGGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCGGAGTGGCATGCTGGTaGAGGGCGGATGAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: VVGAGQVKTGGRARQNYIGVACW*RADEGS
Trigger: AGAGCCCTCATCCGCCCTCCACCAGCATGCCACTCC...GATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCCACCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CCA 90 bp AGCCCAGCCCCGGGCTCTGAGTGCAGGCAGCGTAGCACCAGGAAGTGGCTTTGCACTTTCCTCAGAGCTTaGGTTGCCTGGCTTGGGTGT +
Preference number: 4 (lower is better)
Translates to: SPAPGSECRQRSTRKWLCTFLRA*VAWLGC
Trigger: ACACCCAAGCCAGGCAACCCAAGCTCTGAGGAAAGT...GCAAAGCCACTTCCTGGTGCTACGCTGCCTGCACTCAGAGCCCGGGGCTGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CCA 90 bp GGCCCCAGCACAGCATGGCGTCCATTCAGCTTTTGGTTGGTCAGGGTGGTGGGACTGCGGCCCTTGCCTTaGGACAAGCTCTGTGGCCTT +
Preference number: 4 (lower is better)
Translates to: GPSTAWRPFSFWLVRVVGLRPLP*DKLCGL
Trigger: AAGGCCACAGAGCTTGTCCCAAGGCAAGGGCCGCAG...TCCCACCACCCTGACCAACCAAAAGCTGAATGGACGCCATGCTGTGCTGGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CCA 90 bp GCCCCGGGCTCTGAGTGCAGGCAGCGTAGCACCAGGAAGTGGCTTTGCCGAGGTCCCCATCCAAGTCTTTaGGCAGGAACACATCGTCCA +
Preference number: 4 (lower is better)
Translates to: APGSECRQRSTRKWLCRGPHPSL*AGTHRP
Trigger: TGGACGATGTGTTCCTGCCCAAAGACTTGGATGGGG...ACCTCGGCAAAGCCACTTCCTGGTGCTACGCTGCCTGCACTCAGAGCCCGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR TCA 90 bp GGTGGGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCTGGGGAGCAGTAAGGTCTaGGTGCTGGTGGTGCTCCGA +
Preference number: 4 (lower is better)
Translates to: GGSRTGQDRWQGTSELHLGSSKV*VLVVLR
Trigger: TCGGAGCACCACCAGCACTCAGACCTTACTGCTCCC...CAGATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR TCA 90 bp GGGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCTGCAGGGAGCCACTGAGGTCTaGAGGAGTGAGGGTCTGAGC +
Preference number: 4 (lower is better)
Translates to: GSRTGQDRWQGTSELHLQGATEV*RSEGLS
Trigger: GCTCAGACCCTCACTCCTTCAGACCTCAGTGGCTCC...CTGCAGATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR TCA 90 bp GTGGTGGGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCGGAGCCACTGAGGTCTaGAGGAGTGAGGGTCTGAGC +
Preference number: 4 (lower is better)
Translates to: VVGAGQVKTGGRARQNYIGATEV*RSEGLS
Trigger: GCTCAGACCCTCACTCCTTCAGACCTCAGTGGCTCC...GATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCCACCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR TCA 90 bp GTGGTGGGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCGTCCATGGTGGTGGGTaGGGGTCTCTCCTTTCTGCC +
Preference number: 4 (lower is better)
Translates to: VVGAGQVKTGGRARQNYIVHGGG*GSLLSA
Trigger: GGCAGAAAGGAGAGACCCTCACCCACCACCATGGAC...GATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCCACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR TCA 90 bp GGTGGGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCTGGTCCATGGTGGTGGGTaGGGGTCTCTCCTTTCTGCC +
Preference number: 4 (lower is better)
Translates to: GGSRTGQDRWQGTSELHLVHGGG*GSLLSA
Trigger: GGCAGAAAGGAGAGACCCTCACCCACCACCATGGAC...CAGATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR TCA 90 bp GGTGGGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCTGCACTTTGGCAGGCTCTaGGCCCTTGCTGGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: GGSRTGQDRWQGTSELHLHFGRL*ALAGLL
Trigger: AAGCAGCCCAGCAAGGGCTCAGAGCCTGCCAAAGTG...CAGATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR TCA 90 bp AGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCTGCAGCTTGAGGAGGTAGGGGGAACCTaGGGGCCTGGAGCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: RTGQDRWQGTSELHLQLEEVGGT*GPGASL
Trigger: CAAGCTGGCTCCAGGCCCTCAGGTTCCCCCTACCTC...CTCAAGCTGCAGATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000225240.3
CDS-3UTR GCA 90 bp GAAACCAAACACAAAGAGAGCAGGTTTGGGCCAGCAGTCCCACCAGCCCTTGCTCTGAGCGGGGAAAGGTaGCACTGGGGTGGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: ETKHKESRFGPAVPPALALSGER*HWGGGQ
Trigger: CTGCCCACCACCCCAGTGGCACCTTTCCCCGCTCAG...AGCAAGGGCTGGTGGGACTGCTGGCCCAAACCTGCTCTCTTTGTGTTTGGTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR GCA 90 bp TGGTGGGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCTGCCCAGACCCTCATCTaGCTCACAGGCCAGGCCACT +
Preference number: 4 (lower is better)
Translates to: WWEQDRSRQVAGHVRTTSAQTLI*LTGQAT
Trigger: AGTGGCCTGGCCTGTGAGGCAGATGAGGGTCTGGGC...AGATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCCACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR GCA 90 bp TGGGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCTGCAGCCCAGACCCTCATCTaGCTCACAGGCCAGGCCACT +
Preference number: 4 (lower is better)
Translates to: WEQDRSRQVAGHVRTTSAAQTLI*LTGQAT
Trigger: AGTGGCCTGGCCTGTGAGGCAGATGAGGGTCTGGGC...TGCAGATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR GCA 90 bp GTGGTGGGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCGAGGCTGACTTCTCCTaGTTGTTTCGGCTCCGGCGG +
Preference number: 4 (lower is better)
Translates to: VVGAGQVKTGGRARQNYIEADFS*LFRLRR
Trigger: CCGCCGGAGCCGAAACAAGCAGGAGAAGTCAGCCTC...GATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCCACCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CCA 90 bp GGCCCCAGCACAGCATGGCGTCCATTCAGCTTTTGGTTGGTCAGGGTGGTGGGACTGACAGGAACGAGCTaGGATCCCAGTCCCCTGAGT +
Preference number: 4 (lower is better)
Translates to: GPSTAWRPFSFWLVRVVGLTGTS*DPSPLS
Trigger: ACTCAGGGGACTGGGATCCCAGCTCGTTCCTGTCAG...TCCCACCACCCTGACCAACCAAAAGCTGAATGGACGCCATGCTGTGCTGGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CCA 90 bp CCTCACAGGCCCCAGCACAGCATGGCGTCCATTCAGCTTTTGGTTGGTCAGGGTGCACCCCGAGAGTGGTaGAGGCATCTTCAGGAGTGG +
Preference number: 4 (lower is better)
Translates to: PHRPQHSMASIQLLVGQGAPREW*RHLQEW
Trigger: CCACTCCTGAAGATGCCTCCACCACTCTCGGGGTGC...ACCCTGACCAACCAAAAGCTGAATGGACGCCATGCTGTGCTGGGGCCTGTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CCA 90 bp CAGGGTGGTGGGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACTGAGAGCTCGGTGGTaGGAGAAGAGGACCACCACA +
Preference number: 4 (lower is better)
Translates to: QGGGSRTGQDRWQGTSELLRARW*EKRTTT
Trigger: TGTGGTGGTCCTCTTCTCCCACCACCGAGCTCTCAG...TAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCCACCACCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CCA 90 bp TGGTGGGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCTCGGCTGAGAGCTCGGTaGTGGGAGAAGAGGACCACC +
Preference number: 4 (lower is better)
Translates to: WWEQDRSRQVAGHVRTTSRLRAR*WEKRTT
Trigger: GGTGGTCCTCTTCTCCCACCACCGAGCTCTCAGCCG...AGATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCCACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CCA 90 bp TGGGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCTGCACGGCTGAGAGCTCGGTaGTGGGAGAAGAGGACCACC +
Preference number: 4 (lower is better)
Translates to: WEQDRSRQVAGHVRTTSARLRAR*WEKRTT
Trigger: GGTGGTCCTCTTCTCCCACCACCGAGCTCTCAGCCG...TGCAGATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CCA 90 bp CTCACAGGCCCCAGCACAGCATGGCGTCCATTCAGCTTTTGGTTGGTCAGGGTGCTCCCTGGCAGGCCTTaGCTCCTGGCTTCCAGAAAC +
Preference number: 4 (lower is better)
Translates to: LTGPSTAWRPFSFWLVRVLPGRP*LLASRN
Trigger: GTTTCTGGAAGCCAGGAGCCAAGGCCTGCCAGGGAG...CACCCTGACCAACCAAAAGCTGAATGGACGCCATGCTGTGCTGGGGCCTGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CCA 90 bp ACAGGCCCCAGCACAGCATGGCGTCCATTCAGCTTTTGGTTGGTCAGGGTGGTGCTCCCTGGCAGGCCTTaGCTCCTGGCTTCCAGAAAC +
Preference number: 4 (lower is better)
Translates to: TGPSTAWRPFSFWLVRVVLPGRP*LLASRN
Trigger: GTTTCTGGAAGCCAGGAGCCAAGGCCTGCCAGGGAG...CACCACCCTGACCAACCAAAAGCTGAATGGACGCCATGCTGTGCTGGGGCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CCA 90 bp ACAGGCCCCAGCACAGCATGGCGTCCATTCAGCTTTTGGTTGGTCAGGGTGGTGAGGGATACCAGGAGGTaGGCCCCTCACCTCTGTCCA +
Preference number: 4 (lower is better)
Translates to: TGPSTAWRPFSFWLVRVVRDTRR*APHLCP
Trigger: TGGACAGAGGTGAGGGGCCCACCTCCTGGTATCCCT...CACCACCCTGACCAACCAAAAGCTGAATGGACGCCATGCTGTGCTGGGGCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CCA 90 bp CTCACAGGCCCCAGCACAGCATGGCGTCCATTCAGCTTTTGGTTGGTCAGGGTGCACCACTGCCCACTTTaGCAGGCTCTGAGCCCTTGC +
Preference number: 4 (lower is better)
Translates to: LTGPSTAWRPFSFWLVRVHHCPL*QALSPC
Trigger: GCAAGGGCTCAGAGCCTGCCAAAGTGGGCAGTGGTG...CACCCTGACCAACCAAAAGCTGAATGGACGCCATGCTGTGCTGGGGCCTGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CCA 90 bp CTCACAGGCCCCAGCACAGCATGGCGTCCATTCAGCTTTTGGTTGGTCAGGGTGGCTCTGTGGCCTTGCTaGACCAGGGGTCTGCTCAGA +
Preference number: 4 (lower is better)
Translates to: LTGPSTAWRPFSFWLVRVALWPC*TRGLLR
Trigger: TCTGAGCAGACCCCTGGTCCAGCAAGGCCACAGAGC...CACCCTGACCAACCAAAAGCTGAATGGACGCCATGCTGTGCTGGGGCCTGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
3UTR CAA 72 bp CACAGGCCCCAGCACAGCATGGCGTCCATTCAGCTTTaGGTTGGTCAGGGTGGTGGGAGCAGGACAGGTCAA +
Preference number: 4 (lower is better)
Translates to: HRPQHSMASIQL*VGQGGGSRTGQ
Trigger: TTGACCTGTCCTGCTCCCACCACCCTGACCAACCAAAAGCTGAATGGACGCCATGCTGTGCTGGGGCCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR TCA 90 bp TGGTGGGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCTGGGAGCAGTAAGGTCTaGGTGCTGGTGGTGCTCCGA +
Preference number: 4 (lower is better)
Translates to: WWEQDRSRQVAGHVRTTSGSSKV*VLVVLR
Trigger: TCGGAGCACCACCAGCACTCAGACCTTACTGCTCCC...AGATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCCACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR TCA 90 bp CAAACACAAAGAGAGCAGGTTTGGGCCAGCAGTCCCACCAGCCCTTGCTCACAGGGTAGGACGCCGAGCTaGAGGAACCAGGGTGAGAAG +
Preference number: 4 (lower is better)
Translates to: QTQREQVWASSPTSPCSQGRTPS*RNQGEK
Trigger: CTTCTCACCCTGGTTCCTTCAGCTCGGCGTCCTACC...CTGTGAGCAAGGGCTGGTGGGACTGCTGGCCCAAACCTGCTCTCTTTGTGTTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR TCA 90 bp GAAACCAAACACAAAGAGAGCAGGTTTGGGCCAGCAGTCCCACCAGCCCTTGCTGGGCACTCTGAAGCCTaGGCGGGGAAAGGTGCCACT +
Preference number: 4 (lower is better)
Translates to: ETKHKESRFGPAVPPALAGHSEA*AGKGAT
Trigger: AGTGGCACCTTTCCCCGCTCAGGCTTCAGAGTGCCC...AGCAAGGGCTGGTGGGACTGCTGGCCCAAACCTGCTCTCTTTGTGTTTGGTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR TCA 90 bp AGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCTGCAGCTTGAGGGGCACTCTGAAGCCTaGGCGGGGAAAGGTGCCACT +
Preference number: 4 (lower is better)
Translates to: RTGQDRWQGTSELHLQLEGHSEA*AGKGAT
Trigger: AGTGGCACCTTTCCCCGCTCAGGCTTCAGAGTGCCC...CTCAAGCTGCAGATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR TCA 90 bp AACACAAAGAGAGCAGGTTTGGGCCAGCAGTCCCACCAGCCCTTGCTCACAGGCCACTGCTCTCCACGCTaGGCTCACACATACTCAGGC +
Preference number: 4 (lower is better)
Translates to: NTKRAGLGQQSHQPLLTGHCSPR*AHTYSG
Trigger: GCCTGAGTATGTGTGAGCTCAGCGTGGAGAGCAGTG...GCCTGTGAGCAAGGGCTGGTGGGACTGCTGGCCCAAACCTGCTCTCTTTGTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR TCA 90 bp CTCACAGGCCCCAGCACAGCATGGCGTCCATTCAGCTTTTGGTTGGTCAGGGTGCACTGCTCTCCACGCTaGGCTCACACATACTCAGGC +
Preference number: 4 (lower is better)
Translates to: LTGPSTAWRPFSFWLVRVHCSPR*AHTYSG
Trigger: GCCTGAGTATGTGTGAGCTCAGCGTGGAGAGCAGTG...CACCCTGACCAACCAAAAGCTGAATGGACGCCATGCTGTGCTGGGGCCTGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR TCA 90 bp GTGGTGGGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCCTGGCTTGGGTGTCTTaGCCCAGATCACCCTGGACA +
Preference number: 4 (lower is better)
Translates to: VVGAGQVKTGGRARQNYILAWVS*PRSPWT
Trigger: TGTCCAGGGTGATCTGGGTCAAGACACCCAAGCCAG...GATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCCACCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR TCA 90 bp ACAGGCCCCAGCACAGCATGGCGTCCATTCAGCTTTTGGTTGGTCAGGGTGGTGCTGGCTTGGGTGTCTTaGCCCAGATCACCCTGGACA +
Preference number: 4 (lower is better)
Translates to: TGPSTAWRPFSFWLVRVVLAWVS*PRSPWT
Trigger: TGTCCAGGGTGATCTGGGTCAAGACACCCAAGCCAG...CACCACCCTGACCAACCAAAAGCTGAATGGACGCCATGCTGTGCTGGGGCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR TCA 90 bp CAAACACAAAGAGAGCAGGTTTGGGCCAGCAGTCCCACCAGCCCTTGCTCACAGCACTTTGGCAGGCTCTaGGCCCTTGCTGGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: QTQREQVWASSPTSPCSQHFGRL*ALAGLL
Trigger: AAGCAGCCCAGCAAGGGCTCAGAGCCTGCCAAAGTG...CTGTGAGCAAGGGCTGGTGGGACTGCTGGCCCAAACCTGCTCTCTTTGTGTTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR GCA 90 bp GGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCTGCAGCAGCTGCGCTCAGAGCTaGTATCCTCTTCCTCGCCCA +
Preference number: 4 (lower is better)
Translates to: GAGQVKTGGRARQNYICSSCAQS*YPLPRP
Trigger: TGGGCGAGGAAGAGGATAGCAGCTCTGAGCGCAGCT...GCTGCAGATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR GCA 90 bp GGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCTGCAGCTTCTTTTTCAGCTTGTaGCGGGCCCGCTTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: GAGQVKTGGRARQNYICSFFFSL*RARLAA
Trigger: GGCTGCCAAGCGGGCCCGGCACAAGCTGAAAAAGAA...GCTGCAGATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000021957.8
CDS-3UTR GCA 90 bp CAGGGTGGTGGGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTAGTCTGCTCAGATTCCTaGTCCAGAGTCCGTGCCTTG +
Preference number: 4 (lower is better)
Translates to: QGGGSRTGQDRWQGTSELVCSDS*SRVRAL
Trigger: CAAGGCACGGACTCTGGAGCAGGAATCTGAGCAGAC...TAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCCACCACCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR GCA 90 bp GGCCCCAGCACAGCATGGCGTCCATTCAGCTTTTGGTTGGTCAGGGTGGTGGGACTTCTTCCCAGCCTTTaGGCTCACGGTGACACAGCA +
Preference number: 4 (lower is better)
Translates to: GPSTAWRPFSFWLVRVVGLLPSL*AHGDTA
Trigger: TGCTGTGTCACCGTGAGCGCAAAGGCTGGGAAGAAG...TCCCACCACCCTGACCAACCAAAAGCTGAATGGACGCCATGCTGTGCTGGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000225240.3
CDS-3UTR CCA 90 bp AACACAAAGAGAGCAGGTTTGGGCCAGCAGTCCCACCAGCCCTTGCTCACAGGCGAGATCGCCACTGCATaGTCTCCACCTGTCTGCCTC +
Preference number: 4 (lower is better)
Translates to: NTKRAGLGQQSHQPLLTGEIATA*SPPVCL
Trigger: GAGGCAGACAGGTGGAGACCATGCAGTGGCGATCTC...GCCTGTGAGCAAGGGCTGGTGGGACTGCTGGCCCAAACCTGCTCTCTTTGTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CCA 90 bp GGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCTGCAGCGAGATCGCCACTGCATaGTCTCCACCTGTCTGCCTC +
Preference number: 4 (lower is better)
Translates to: GAGQVKTGGRARQNYICSEIATA*SPPVCL
Trigger: GAGGCAGACAGGTGGAGACCATGCAGTGGCGATCTC...GCTGCAGATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CCA 90 bp GTGGTGGGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCCTGACAGGAACGAGCTaGGATCCCAGTCCCCTGAGT +
Preference number: 4 (lower is better)
Translates to: VVGAGQVKTGGRARQNYILTGTS*DPSPLS
Trigger: ACTCAGGGGACTGGGATCCCAGCTCGTTCCTGTCAG...GATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCCACCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CCA 90 bp GTGGTGGGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCCTGAGAGCTCGGTGGTaGGAGAAGAGGACCACCACA +
Preference number: 4 (lower is better)
Translates to: VVGAGQVKTGGRARQNYILRARW*EKRTTT
Trigger: TGTGGTGGTCCTCTTCTCCCACCACCGAGCTCTCAG...GATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCCACCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CCA 90 bp CAGGGTGGTGGGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTAGCAGGCCTTGGCTCCTaGCTTCCAGAAACACGATTC +
Preference number: 4 (lower is better)
Translates to: QGGGSRTGQDRWQGTSELAGLGS*LPETRF
Trigger: GAATCGTGTTTCTGGAAGCCAGGAGCCAAGGCCTGC...TAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCCACCACCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CCA 90 bp GTGGTGGGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCCACCTCTGTCCATGGTaGTGGGTGAGGGTCTCTCCT +
Preference number: 4 (lower is better)
Translates to: VVGAGQVKTGGRARQNYIHLCPW*WVRVSP
Trigger: AGGAGAGACCCTCACCCACCACCATGGACAGAGGTG...GATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCCACCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CCA 90 bp GGTGGGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCTGCCTCACCTCTGTCCATaGTGGTGGGTGAGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: GGSRTGQDRWQGTSELHLPHLCP*WWVRVS
Trigger: AGAGACCCTCACCCACCACCATGGACAGAGGTGAGG...CAGATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CCA 90 bp TGGTGGGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCTAGGGATACCAGGAGGTaGGCCCCTCACCTCTGTCCA +
Preference number: 4 (lower is better)
Translates to: WWEQDRSRQVAGHVRTTSRDTRR*APHLCP
Trigger: TGGACAGAGGTGAGGGGCCCACCTCCTGGTATCCCT...AGATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCCACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CCA 90 bp AACACAAAGAGAGCAGGTTTGGGCCAGCAGTCCCACCAGCCCTTGCTCACAGGCTGCCTTGGCCCCACCTaGCCAATTCTGCCAGGAACT +
Preference number: 4 (lower is better)
Translates to: NTKRAGLGQQSHQPLLTGCLGPT*PILPGT
Trigger: AGTTCCTGGCAGAATTGGCCAGGTGGGGCCAAGGCA...GCCTGTGAGCAAGGGCTGGTGGGACTGCTGGCCCAAACCTGCTCTCTTTGTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR TCA 90 bp GGCCCCAGCACAGCATGGCGTCCATTCAGCTTTTGGTTGGTCAGGGTGGTGGGATTTGCAGGATGTGTGTaGCAAGGAGATCGCCACTGC +
Preference number: 4 (lower is better)
Translates to: GPSTAWRPFSFWLVRVVGFAGCV*QGDRHC
Trigger: GCAGTGGCGATCTCCTTGTCACACACATCCTGCAAA...TCCCACCACCCTGACCAACCAAAAGCTGAATGGACGCCATGCTGTGCTGGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR TCA 90 bp GGGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCTGCAGATGTCAGGCCGTTTCTaGGAGGAGCCACTGAGGTCT +
Preference number: 4 (lower is better)
Translates to: GSRTGQDRWQGTSELHLQMSGRF*EEPLRS
Trigger: AGACCTCAGTGGCTCCTCTCAGAAACGGCCTGACAT...CTGCAGATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR TCA 90 bp ACAGGCCCCAGCACAGCATGGCGTCCATTCAGCTTTTGGTTGGTCAGGGTGGTGGGGACAGGTCAAGGTTaGTGTCAGGCCGTTTCTGAG +
Preference number: 4 (lower is better)
Translates to: TGPSTAWRPFSFWLVRVVGTGQG*CQAVSE
Trigger: CTCAGAAACGGCCTGACATCAACCTTGACCTGTCCC...CACCACCCTGACCAACCAAAAGCTGAATGGACGCCATGCTGTGCTGGGGCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR TCA 90 bp CCTCACAGGCCCCAGCACAGCATGGCGTCCATTCAGCTTTTGGTTGGTCAGGGTGGGACAGGTCAAGGTTaGTGTCAGGCCGTTTCTGAG +
Preference number: 4 (lower is better)
Translates to: PHRPQHSMASIQLLVGQGGTGQG*CQAVSE
Trigger: CTCAGAAACGGCCTGACATCAACCTTGACCTGTCCC...ACCCTGACCAACCAAAAGCTGAATGGACGCCATGCTGTGCTGGGGCCTGTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR TCA 90 bp GGCCCCAGCACAGCATGGCGTCCATTCAGCTTTTGGTTGGTCAGGGTGGTGGGAGGTTGGGCACAGTGTTaGGTCTTCTCACAAGCCCAT +
Preference number: 4 (lower is better)
Translates to: GPSTAWRPFSFWLVRVVGGWAQC*VFSQAH
Trigger: ATGGGCTTGTGAGAAGACTCAACACTGTGCCCAACC...TCCCACCACCCTGACCAACCAAAAGCTGAATGGACGCCATGCTGTGCTGGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR TCA 90 bp AGCCCAGCCCCGGGCTCTGAGTGCAGGCAGCGTAGCACCAGGAAGTGGCTTTGCAAAGTCTTCTTTGCTTaGCTTCCCTGTCTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: SPAPGSECRQRSTRKWLCKVFFA*LPCLLL
Trigger: GAGCAAGAGACAGGGAAGTCAAGCAAAGAAGACTTT...GCAAAGCCACTTCCTGGTGCTACGCTGCCTGCACTCAGAGCCCGGGGCTGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR TCA 90 bp TGGTGGGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCTCCTTTGCGCTCACGGTaGCACAGCAGGCAACAAGTC +
Preference number: 4 (lower is better)
Translates to: WWEQDRSRQVAGHVRTTSPLRSR*HSRQQV
Trigger: GACTTGTTGCCTGCTGTGTCACCGTGAGCGCAAAGG...AGATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCCACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225240.3
CDS-3UTR GCA 90 bp TGGGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCTGCATCTCCTCCTCCTCCATaGTCTTTCGGCAGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: WEQDRSRQVAGHVRTTSASPPPP*SFGSSG
Trigger: GCCAGAGCTGCCGAAAGAGCATGGAGGAGGAGGAGA...TGCAGATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR GCA 90 bp GGTGGGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCTGGCAGTAAGGTCTGAGTaGTGGTGGTGCTCCGAGACA +
Preference number: 4 (lower is better)
Translates to: GGSRTGQDRWQGTSELHLAVRSE*WWCSET
Trigger: TGTCTCGGAGCACCACCAGCACTCAGACCTTACTGC...CAGATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR GCA 90 bp CTCACAGGCCCCAGCACAGCATGGCGTCCATTCAGCTTTTGGTTGGTCAGGGTGCTGTGTGCAAATTTGTaGCCCTTGCACCCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: LTGPSTAWRPFSFWLVRVLCANL*PLHPGS
Trigger: GGACCCTGGGTGCAAGGGGCACAAATTTGCACACAG...CACCCTGACCAACCAAAAGCTGAATGGACGCCATGCTGTGCTGGGGCCTGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR GCA 90 bp CTCACAGGCCCCAGCACAGCATGGCGTCCATTCAGCTTTTGGTTGGTCAGGGTGGGCCAGGCCACTGTGTaGAAATTTGTGCCCCTTGCA +
Preference number: 4 (lower is better)
Translates to: LTGPSTAWRPFSFWLVRVGQATV*KFVPLA
Trigger: TGCAAGGGGCACAAATTTGCACACAGTGGCCTGGCC...CACCCTGACCAACCAAAAGCTGAATGGACGCCATGCTGTGCTGGGGCCTGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR GCA 90 bp TGGTGGGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCTAGCTGCGCTCAGAGCTaGTATCCTCTTCCTCGCCCA +
Preference number: 4 (lower is better)
Translates to: WWEQDRSRQVAGHVRTTSSCAQS*YPLPRP
Trigger: TGGGCGAGGAAGAGGATAGCAGCTCTGAGCGCAGCT...AGATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCCACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR GCA 90 bp AACACAAAGAGAGCAGGTTTGGGCCAGCAGTCCCACCAGCCCTTGCTCACAGGCACGAGGTGCAAGAGCTaGGCTCAGAGCTGCTATCCT +
Preference number: 4 (lower is better)
Translates to: NTKRAGLGQQSHQPLLTGTRCKS*AQSCYP
Trigger: AGGATAGCAGCTCTGAGCGCAGCTCTTGCACCTCGT...GCCTGTGAGCAAGGGCTGGTGGGACTGCTGGCCCAAACCTGCTCTCTTTGTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR GCA 90 bp GGTGGGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCTGACGAGGTGCAAGAGCTaGGCTCAGAGCTGCTATCCT +
Preference number: 4 (lower is better)
Translates to: GGSRTGQDRWQGTSELHLTRCKS*AQSCYP
Trigger: AGGATAGCAGCTCTGAGCGCAGCTCTTGCACCTCGT...CAGATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR GCA 90 bp GTGGTGGGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCAGGGTCTCTCCTTTCTaGCCAAGGTGGGACTGGTTC +
Preference number: 4 (lower is better)
Translates to: VVGAGQVKTGGRARQNYIRVSPF*PRWDWF
Trigger: GAACCAGTCCCACCTTGGGCAGAAAGGAGAGACCCT...GATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCCACCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR GCA 90 bp GGCCCCAGCACAGCATGGCGTCCATTCAGCTTTTGGTTGGTCAGGGTGGTGGGACCAGGGGGCTGGACTTaGCAAAGTCTTCTTTGCTTG +
Preference number: 4 (lower is better)
Translates to: GPSTAWRPFSFWLVRVVGPGGWT*QSLLCL
Trigger: CAAGCAAAGAAGACTTTGGCAAGTCCAGCCCCCTGG...TCCCACCACCCTGACCAACCAAAAGCTGAATGGACGCCATGCTGTGCTGGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CCA 90 bp CAAACACAAAGAGAGCAGGTTTGGGCCAGCAGTCCCACCAGCCCTTGCTCACAGAAGCCTCACCAAGGATaGCAGGAGGACTCCCAAGCG +
Preference number: 4 (lower is better)
Translates to: QTQREQVWASSPTSPCSQKPHQG*QEDSQA
Trigger: CGCTTGGGAGTCCTCCTGCCATCCTTGGTGAGGCTT...CTGTGAGCAAGGGCTGGTGGGACTGCTGGCCCAAACCTGCTCTCTTTGTGTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CCA 90 bp GGGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCTGCAGAGGTCTGAGTGCTGGTaGTGCTCCGAGACAGGGAAA +
Preference number: 4 (lower is better)
Translates to: GSRTGQDRWQGTSELHLQRSECW*CSETGK
Trigger: TTTCCCTGTCTCGGAGCACCACCAGCACTCAGACCT...CTGCAGATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CCA 90 bp TGGGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCTGCAGTAAGGTCTGAGTGCTaGTGGTGCTCCGAGACAGGG +
Preference number: 4 (lower is better)
Translates to: WEQDRSRQVAGHVRTTSAVRSEC*WCSETG
Trigger: CCCTGTCTCGGAGCACCACCAGCACTCAGACCTTAC...TGCAGATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CCA 90 bp AAACCAAACACAAAGAGAGCAGGTTTGGGCCAGCAGTCCCACCAGCCCTTGCTCAGGCATCTTCAGGAGTaGCATGCTGGTGGAGGGCGG +
Preference number: 4 (lower is better)
Translates to: KPNTKRAGLGQQSHQPLLRHLQE*HAGGGR
Trigger: CCGCCCTCCACCAGCATGCCACTCCTGAAGATGCCT...GAGCAAGGGCTGGTGGGACTGCTGGCCCAAACCTGCTCTCTTTGTGTTTGGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CCA 90 bp GAAACCAAACACAAAGAGAGCAGGTTTGGGCCAGCAGTCCCACCAGCCCTTGCTGCACCCCGAGAGTGGTaGAGGCATCTTCAGGAGTGG +
Preference number: 4 (lower is better)
Translates to: ETKHKESRFGPAVPPALAAPREW*RHLQEW
Trigger: CCACTCCTGAAGATGCCTCCACCACTCTCGGGGTGC...AGCAAGGGCTGGTGGGACTGCTGGCCCAAACCTGCTCTCTTTGTGTTTGGTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CCA 90 bp ACAGGCCCCAGCACAGCATGGCGTCCATTCAGCTTTTGGTTGGTCAGGGTGGTGCTCTGTCCATGGTGGTaGGTGAGGGTCTCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: TGPSTAWRPFSFWLVRVVLCPWW*VRVSPF
Trigger: GAAAGGAGAGACCCTCACCCACCACCATGGACAGAG...CACCACCCTGACCAACCAAAAGCTGAATGGACGCCATGCTGTGCTGGGGCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CCA 90 bp GGTGGGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCTGCTCTGTCCATGGTGGTaGGTGAGGGTCTCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: GGSRTGQDRWQGTSELHLLCPWW*VRVSPF
Trigger: GAAAGGAGAGACCCTCACCCACCACCATGGACAGAG...CAGATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CCA 90 bp GTGGTGGGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCAGAGCTTGGGTTGCCTaGCTTGGGTGTCTTGACCCA +
Preference number: 4 (lower is better)
Translates to: VVGAGQVKTGGRARQNYIRAWVA*LGCLDP
Trigger: TGGGTCAAGACACCCAAGCCAGGCAACCCAAGCTCT...GATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCCACCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CCA 90 bp ACAGGCCCCAGCACAGCATGGCGTCCATTCAGCTTTTGGTTGGTCAGGGTGGTGAGAGCTTGGGTTGCCTaGCTTGGGTGTCTTGACCCA +
Preference number: 4 (lower is better)
Translates to: TGPSTAWRPFSFWLVRVVRAWVA*LGCLDP
Trigger: TGGGTCAAGACACCCAAGCCAGGCAACCCAAGCTCT...CACCACCCTGACCAACCAAAAGCTGAATGGACGCCATGCTGTGCTGGGGCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CCA 90 bp AAACCAAACACAAAGAGAGCAGGTTTGGGCCAGCAGTCCCACCAGCCCTTGCTCCACCACTGCCCACTTTaGCAGGCTCTGAGCCCTTGC +
Preference number: 4 (lower is better)
Translates to: KPNTKRAGLGQQSHQPLLHHCPL*QALSPC
Trigger: GCAAGGGCTCAGAGCCTGCCAAAGTGGGCAGTGGTG...GAGCAAGGGCTGGTGGGACTGCTGGCCCAAACCTGCTCTCTTTGTGTTTGGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CCA 90 bp GAAACCAAACACAAAGAGAGCAGGTTTGGGCCAGCAGTCCCACCAGCCCTTGCTGCTCTGTGGCCTTGCTaGACCAGGGGTCTGCTCAGA +
Preference number: 4 (lower is better)
Translates to: ETKHKESRFGPAVPPALAALWPC*TRGLLR
Trigger: TCTGAGCAGACCCCTGGTCCAGCAAGGCCACAGAGC...AGCAAGGGCTGGTGGGACTGCTGGCCCAAACCTGCTCTCTTTGTGTTTGGTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CCA 90 bp AACACAAAGAGAGCAGGTTTGGGCCAGCAGTCCCACCAGCCCTTGCTCACAGGCCAAGTCTGTACAGACTaGCTGGAGGTAGGGGGAACC +
Preference number: 4 (lower is better)
Translates to: NTKRAGLGQQSHQPLLTGQVCTD*LEVGGT
Trigger: GGTTCCCCCTACCTCCAGCCAGTCTGTACAGACTTG...GCCTGTGAGCAAGGGCTGGTGGGACTGCTGGCCCAAACCTGCTCTCTTTGTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000225240.3
3UTR CAA 72 bp ACAGGTGGCAGGGCACGTCAGAACTACATCTGCAGCTaGAGCTGCGGCCTTGAGGTGACCTGGAGACGTCAA +
Preference number: 4 (lower is better)
Translates to: TGGRARQNYICS*SCGLEVTWRRQ
Trigger: TTGACGTCTCCAGGTCACCTCAAGGCCGCAGCTCAAGCTGCAGATGTAGTTCTGACGTGCCCTGCCACCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR TCA 90 bp ACAGGCCCCAGCACAGCATGGCGTCCATTCAGCTTTTGGTTGGTCAGGGTGGTGTGCTCAAGAAGCTATTaGCGCGGTCCAGTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: TGPSTAWRPFSFWLVRVVCSRSY*RGPVPG
Trigger: ACCAGGAACTGGACCGCGTCAATAGCTTCTTGAGCA...CACCACCCTGACCAACCAAAAGCTGAATGGACGCCATGCTGTGCTGGGGCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR TCA 90 bp GTGGTGGGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCTGTAACGTGTGGCTCTaGGGGGAACCCAAGGTCAAA +
Preference number: 4 (lower is better)
Translates to: VVGAGQVKTGGRARQNYICNVWL*GEPKVK
Trigger: TTTGACCTTGGGTTCCCCTCAGAGCCACACGTTACA...GATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCCACCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR TCA 90 bp CAAACACAAAGAGAGCAGGTTTGGGCCAGCAGTCCCACCAGCCCTTGCTCACAGCACCAGTCCATTTTGTaGAGGGCCTTCTTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: QTQREQVWASSPTSPCSQHQSIL*RAFFPA
Trigger: GGCTGGGAAGAAGGCCCTTCACAAAATGGACTGGTG...CTGTGAGCAAGGGCTGGTGGGACTGCTGGCCCAAACCTGCTCTCTTTGTGTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225240.3
CDS-3UTR GCA 90 bp GAAACCAAACACAAAGAGAGCAGGTTTGGGCCAGCAGTCCCACCAGCCCTTGCTTCTCCTCCTCCTCCATaGTCTTTCGGCAGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: ETKHKESRFGPAVPPALASPPPP*SFGSSG
Trigger: GCCAGAGCTGCCGAAAGAGCATGGAGGAGGAGGAGA...AGCAAGGGCTGGTGGGACTGCTGGCCCAAACCTGCTCTCTTTGTGTTTGGTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR GCA 90 bp GAAACCAAACACAAAGAGAGCAGGTTTGGGCCAGCAGTCCCACCAGCCCTTGCTTCTGAGTGCTGGTGGTaGTCCGAGACAGGGAAAGCC +
Preference number: 4 (lower is better)
Translates to: ETKHKESRFGPAVPPALASECWW*SETGKA
Trigger: GGCTTTCCCTGTCTCGGAGCACCACCAGCACTCAGA...AGCAAGGGCTGGTGGGACTGCTGGCCCAAACCTGCTCTCTTTGTGTTTGGTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR GCA 90 bp TGGTGGGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCTCAAATTTGTGCCCCTTaGACCCAGGGTCCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: WWEQDRSRQVAGHVRTTSQICAP*TQGPCC
Trigger: ACAGCAGGGACCCTGGGTGCAAGGGGCACAAATTTG...AGATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCCACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR GCA 90 bp TGGTGGGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCTGGCCAGGCCACTGTGTaGAAATTTGTGCCCCTTGCA +
Preference number: 4 (lower is better)
Translates to: WWEQDRSRQVAGHVRTTSGQATV*KFVPLA
Trigger: TGCAAGGGGCACAAATTTGCACACAGTGGCCTGGCC...AGATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCCACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR GCA 90 bp CAGGGTGGTGGGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTAGAAACACGATTCACCTaGTTCAGAGCTTCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: QGGGSRTGQDRWQGTSELETRFT*FRASVA
Trigger: GGCCACAGAAGCTCTGAAGCAGGTGAATCGTGTTTC...TAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCCACCACCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR GCA 90 bp TGGTGGGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCTAGGGTCTCTCCTTTCTaGCCAAGGTGGGACTGGTTC +
Preference number: 4 (lower is better)
Translates to: WWEQDRSRQVAGHVRTTSRVSPF*PRWDWF
Trigger: GAACCAGTCCCACCTTGGGCAGAAAGGAGAGACCCT...AGATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCCACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CCA 90 bp AAACCAAACACAAAGAGAGCAGGTTTGGGCCAGCAGTCCCACCAGCCCTTGCTCAAGCCTCACCAAGGATaGCAGGAGGACTCCCAAGCG +
Preference number: 4 (lower is better)
Translates to: KPNTKRAGLGQQSHQPLLKPHQG*QEDSQA
Trigger: CGCTTGGGAGTCCTCCTGCCATCCTTGGTGAGGCTT...GAGCAAGGGCTGGTGGGACTGCTGGCCCAAACCTGCTCTCTTTGTGTTTGGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CCA 90 bp AAACCAAACACAAAGAGAGCAGGTTTGGGCCAGCAGTCCCACCAGCCCTTGCTCCACCTCTGTCCATGGTaGTGGGTGAGGGTCTCTCCT +
Preference number: 4 (lower is better)
Translates to: KPNTKRAGLGQQSHQPLLHLCPW*WVRVSP
Trigger: AGGAGAGACCCTCACCCACCACCATGGACAGAGGTG...GAGCAAGGGCTGGTGGGACTGCTGGCCCAAACCTGCTCTCTTTGTGTTTGGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CCA 90 bp GGGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCTGCAGACTTTCCTCAGAGCTTaGGTTGCCTGGCTTGGGTGT +
Preference number: 4 (lower is better)
Translates to: GSRTGQDRWQGTSELHLQTFLRA*VAWLGC
Trigger: ACACCCAAGCCAGGCAACCCAAGCTCTGAGGAAAGT...CTGCAGATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CCA 90 bp AAACCAAACACAAAGAGAGCAGGTTTGGGCCAGCAGTCCCACCAGCCCTTGCTCTGCCTTGGCCCCACCTaGCCAATTCTGCCAGGAACT +
Preference number: 4 (lower is better)
Translates to: KPNTKRAGLGQQSHQPLLCLGPT*PILPGT
Trigger: AGTTCCTGGCAGAATTGGCCAGGTGGGGCCAAGGCA...GAGCAAGGGCTGGTGGGACTGCTGGCCCAAACCTGCTCTCTTTGTGTTTGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR TCA 90 bp CAAACACAAAGAGAGCAGGTTTGGGCCAGCAGTCCCACCAGCCCTTGCTCACAGTTTGCAGGATGTGTGTaGCAAGGAGATCGCCACTGC +
Preference number: 4 (lower is better)
Translates to: QTQREQVWASSPTSPCSQFAGCV*QGDRHC
Trigger: GCAGTGGCGATCTCCTTGTCACACACATCCTGCAAA...CTGTGAGCAAGGGCTGGTGGGACTGCTGGCCCAAACCTGCTCTCTTTGTGTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR TCA 90 bp TGGGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCTGCATGCTCAAGAAGCTATTaGCGCGGTCCAGTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: WEQDRSRQVAGHVRTTSACSRSY*RGPVPG
Trigger: ACCAGGAACTGGACCGCGTCAATAGCTTCTTGAGCA...TGCAGATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR TCA 90 bp TGGTGGGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCTTGTAACGTGTGGCTCTaGGGGGAACCCAAGGTCAAA +
Preference number: 4 (lower is better)
Translates to: WWEQDRSRQVAGHVRTTSCNVWL*GEPKVK
Trigger: TTTGACCTTGGGTTCCCCTCAGAGCCACACGTTACA...AGATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCCACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR GCA 90 bp TGGTGGGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCTCCAGGGGGCTGGACTTaGCAAAGTCTTCTTTGCTTG +
Preference number: 4 (lower is better)
Translates to: WWEQDRSRQVAGHVRTTSPGGWT*QSLLCL
Trigger: CAAGCAAAGAAGACTTTGGCAAGTCCAGCCCCCTGG...AGATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCCACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR GCA 90 bp GAAACCAAACACAAAGAGAGCAGGTTTGGGCCAGCAGTCCCACCAGCCCTTGCTGTCTGCTCAGATTCCTaGTCCAGAGTCCGTGCCTTG +
Preference number: 4 (lower is better)
Translates to: ETKHKESRFGPAVPPALAVCSDS*SRVRAL
Trigger: CAAGGCACGGACTCTGGAGCAGGAATCTGAGCAGAC...AGCAAGGGCTGGTGGGACTGCTGGCCCAAACCTGCTCTCTTTGTGTTTGGTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CCA 90 bp AAACCAAACACAAAGAGAGCAGGTTTGGGCCAGCAGTCCCACCAGCCCTTGCTCAGGTCTGAGTGCTGGTaGTGCTCCGAGACAGGGAAA +
Preference number: 4 (lower is better)
Translates to: KPNTKRAGLGQQSHQPLLRSECW*CSETGK
Trigger: TTTCCCTGTCTCGGAGCACCACCAGCACTCAGACCT...GAGCAAGGGCTGGTGGGACTGCTGGCCCAAACCTGCTCTCTTTGTGTTTGGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CCA 90 bp GGCCCCAGCACAGCATGGCGTCCATTCAGCTTTTGGTTGGTCAGGGTGGTGGGATTGGCTTTCCACCTGTaGCCACAGGCTCAGATAATT +
Preference number: 4 (lower is better)
Translates to: GPSTAWRPFSFWLVRVVGLAFHL*PQAQII
Trigger: AATTATCTGAGCCTGTGGCCACAGGTGGAAAGCCAA...TCCCACCACCCTGACCAACCAAAAGCTGAATGGACGCCATGCTGTGCTGGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CCA 90 bp TGGTGGGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCTCCCCATCCAAGTCTTTaGGCAGGAACACATCGTCCA +
Preference number: 4 (lower is better)
Translates to: WWEQDRSRQVAGHVRTTSPHPSL*AGTHRP
Trigger: TGGACGATGTGTTCCTGCCCAAAGACTTGGATGGGG...AGATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CCA 90 bp CCTCACAGGCCCCAGCACAGCATGGCGTCCATTCAGCTTTTGGTTGGTCAGGGTATTCTTGACGAGCTTTaGCATGAAGTCAGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: PHRPQHSMASIQLLVGQGILDEL*HEVRGQ
Trigger: CTGCCCCCTGACTTCATGCCAAAGCTCGTCAAGAAT...ACCCTGACCAACCAAAAGCTGAATGGACGCCATGCTGTGCTGGGGCCTGTGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000225240.3
CDS-3UTR TCA 90 bp AGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCTGCAGCTTGAGGGTTGGGCACAGTGTTaGGTCTTCTCACAAGCCCAT +
Preference number: 4 (lower is better)
Translates to: RTGQDRWQGTSELHLQLEGWAQC*VFSQAH
Trigger: ATGGGCTTGTGAGAAGACTCAACACTGTGCCCAACC...CTCAAGCTGCAGATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR TCA 90 bp GGTGGGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCTGACTGGGAACTTCCTTTaGACTTTCCTCAGAGCTTGG +
Preference number: 4 (lower is better)
Translates to: GGSRTGQDRWQGTSELHLTGNFL*TFLRAW
Trigger: CCAAGCTCTGAGGAAAGTTCAAAGGAAGTTCCCAGT...CAGATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR GCA 90 bp TGGTGGGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCTGGCAGCTTCTCACCCTaGAACACCAGTCCATTTTGT +
Preference number: 4 (lower is better)
Translates to: WWEQDRSRQVAGHVRTTSGSFSP*NTSPFC
Trigger: ACAAAATGGACTGGTGTTGCAGGGTGAGAAGCTGCC...AGATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCCACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225240.3
CDS-3UTR TCA 90 bp GGTGGGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCTGAAAGTCTTCTTTGCTTaGCTTCCCTGTCTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: GGSRTGQDRWQGTSELHLKVFFA*LPCLLL
Trigger: GAGCAAGAGACAGGGAAGTCAAGCAAAGAAGACTTT...CAGATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR TCA 90 bp GGCCCCAGCACAGCATGGCGTCCATTCAGCTTTTGGTTGGTCAGGGTGGTGGGATTCACAGCAACTTTCTaGCGAGTTTGCTTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: GPSTAWRPFSFWLVRVVGFTATF*RVCFAE
Trigger: TTCTGCAAAGCAAACTCGTCAGAAAGTTGCTGTGAA...TCCCACCACCCTGACCAACCAAAAGCTGAATGGACGCCATGCTGTGCTGGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR GCA 90 bp GGTGGGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCTGCACAAGACTGTGATTTaGAGGATGTGTGTGACAAGG +
Preference number: 4 (lower is better)
Translates to: GGSRTGQDRWQGTSELHLHKTVI*RMCVTR
Trigger: CCTTGTCACACACATCCTGCAAATCACAGTCTTGTG...CAGATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR GCA 90 bp GAAACCAAACACAAAGAGAGCAGGTTTGGGCCAGCAGTCCCACCAGCCCTTGCTGAAACACGATTCACCTaGTTCAGAGCTTCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: ETKHKESRFGPAVPPALAETRFT*FRASVA
Trigger: GGCCACAGAAGCTCTGAAGCAGGTGAATCGTGTTTC...AGCAAGGGCTGGTGGGACTGCTGGCCCAAACCTGCTCTCTTTGTGTTTGGTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CCA 90 bp CAAACACAAAGAGAGCAGGTTTGGGCCAGCAGTCCCACCAGCCCTTGCTCACAGTTGGCTTTCCACCTGTaGCCACAGGCTCAGATAATT +
Preference number: 4 (lower is better)
Translates to: QTQREQVWASSPTSPCSQLAFHL*PQAQII
Trigger: AATTATCTGAGCCTGTGGCCACAGGTGGAAAGCCAA...CTGTGAGCAAGGGCTGGTGGGACTGCTGGCCCAAACCTGCTCTCTTTGTGTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR TCA 90 bp AGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCTGCAGCTTGAGACTGGGAACTTCCTTTaGACTTTCCTCAGAGCTTGG +
Preference number: 4 (lower is better)
Translates to: RTGQDRWQGTSELHLQLETGNFL*TFLRAW
Trigger: CCAAGCTCTGAGGAAAGTTCAAAGGAAGTTCCCAGT...CTCAAGCTGCAGATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR TCA 90 bp GGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCTGCAGCTTCACAGCAACTTTCTaGCGAGTTTGCTTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: GAGQVKTGGRARQNYICSFTATF*RVCFAE
Trigger: TTCTGCAAAGCAAACTCGTCAGAAAGTTGCTGTGAA...GCTGCAGATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR GCA 90 bp TGGTGGGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCTCACAAGACTGTGATTTaGAGGATGTGTGTGACAAGG +
Preference number: 4 (lower is better)
Translates to: WWEQDRSRQVAGHVRTTSHKTVI*RMCVTR
Trigger: CCTTGTCACACACATCCTGCAAATCACAGTCTTGTG...AGATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCCACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR GCA 90 bp GGCCCCAGCACAGCATGGCGTCCATTCAGCTTTTGGTTGGTCAGGGTGGTGGGACAGATAATTCCTGTTTaGAACTGGGAACTTCCTTTG +
Preference number: 4 (lower is better)
Translates to: GPSTAWRPFSFWLVRVVGQIIPV*NWELPL
Trigger: CAAAGGAAGTTCCCAGTTGCAAACAGGAATTATCTG...TCCCACCACCCTGACCAACCAAAAGCTGAATGGACGCCATGCTGTGCTGGGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR GCA 90 bp CAGGGTGGTGGGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACAGATAATTCCTGTTTaGAACTGGGAACTTCCTTTG +
Preference number: 4 (lower is better)
Translates to: QGGGSRTGQDRWQGTSELQIIPV*NWELPL
Trigger: CAAAGGAAGTTCCCAGTTGCAAACAGGAATTATCTG...TAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCCACCACCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR GCA 90 bp GGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCTGCAGCCTGACGAGTTTGCTTTaGAGAATCCAAACAGAACCT +
Preference number: 4 (lower is better)
Translates to: GAGQVKTGGRARQNYICSLTSLL*RIQTEP
Trigger: AGGTTCTGTTTGGATTCTGCAAAGCAAACTCGTCAG...GCTGCAGATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR GCA 90 bp AGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCTGCAGCTTGAGCTGACGAGTTTGCTTTaGAGAATCCAAACAGAACCT +
Preference number: 4 (lower is better)
Translates to: RTGQDRWQGTSELHLQLELTSLL*RIQTEP
Trigger: AGGTTCTGTTTGGATTCTGCAAAGCAAACTCGTCAG...CTCAAGCTGCAGATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS GCA 90 bp GAGGACCACCACAGTGCCCGCTGCAGTGCCCGCTGCAGGGGTGGCTaGACCCCGAGAGTGGTGGAGGCATCTTCAGGAGTGGCATGCTGG +
Preference number: 5 (lower is better)
Translates to: EDHHSARCSARCRGG*TPRVVEASSGVACW
Trigger: CCAGCATGCCACTCCTGAAGATGCCTCCACCACTCTCGGGGTGCAGCCACCCCTGCAGCGGGCACTGCAGCGGGCACTGTGGTGGTCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CAA 90 bp AGCCCAGCCCCGGGCTCTGAGTGCAGGCAGCGTAGCACCAGGAAGTGGCTTTGCGCTGCGGCCCTTGCCTaGGGACAAGCTCTGTGGCCT +
Preference number: 5 (lower is better)
Translates to: SPAPGSECRQRSTRKWLCAAALA*GQALWP
Trigger: AGGCCACAGAGCTTGTCCCAAGGCAAGGGCCGCAGC...GCAAAGCCACTTCCTGGTGCTACGCTGCCTGCACTCAGAGCCCGGGGCTGGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS GCA 90 bp CAGGGAAAGCCTCACCAAGGATGGCAGGAGGACTCCCAAGCGAGCTaGCTGGCACAGCCCCGCTGGAGTGTGGGGAGTTCCAGAGGCCTG +
Preference number: 5 (lower is better)
Translates to: QGKPHQGWQEDSQAS*LAQPRWSVGSSRGL
Trigger: CAGGCCTCTGGAACTCCCCACACTCCAGCGGGGCTGTGCCAGGCAGCTCGCTTGGGAGTCCTCCTGCCATCCTTGGTGAGGCTTTCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS CCA 90 bp CCGGCGGCTGCGGCCCTTGCCTTGGGACAAGCTCTGTGGCCTTGCTaGACCAGGGGTCTGCTCAGATTCCTGCTCCAGAGTCCGTGCCTT +
Preference number: 5 (lower is better)
Translates to: PAAAALALGQALWPC*TRGLLRFLLQSPCL
Trigger: AAGGCACGGACTCTGGAGCAGGAATCTGAGCAGACCCCTGGTCCAGCAAGGCCACAGAGCTTGTCCCAAGGCAAGGGCCGCAGCCGCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021957.8
ENSMUST00000224249.2
ENSMUST00000225240.3
CDS-3UTR CAA 90 bp GGCCCCAGCACAGCATGGCGTCCATTCAGCTTTTGGTTGGTCAGGGTGGTGGGATTGTGCCGGGCCCGCTaGGCAGCCCTGGCGCTGTTG +
Preference number: 5 (lower is better)
Translates to: GPSTAWRPFSFWLVRVVGLCRAR*AALALL
Trigger: CAACAGCGCCAGGGCTGCCAAGCGGGCCCGGCACAA...TCCCACCACCCTGACCAACCAAAAGCTGAATGGACGCCATGCTGTGCTGGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021957.8
CDS GCA 90 bp AGGCTGACTTCTCCTGCTTGTTTCGGCTCCGGCGGCTGCGGCCCTTaGCTTGGGACAAGCTCTGTGGCCTTGCTGGACCAGGGGTCTGCT +
Preference number: 5 (lower is better)
Translates to: RLTSPACFGSGGCGP*LGTSSVALLDQGSA
Trigger: AGCAGACCCCTGGTCCAGCAAGGCCACAGAGCTTGTCCCAAGGCAAGGGCCGCAGCCGCCGGAGCCGAAACAAGCAGGAGAAGTCAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021957.8
ENSMUST00000224249.2
ENSMUST00000225240.3
CDS GCA 90 bp CCAAGGAGGAGGCTGACTTCTCCTGCTTGTTTCGGCTCCGGCGGCTaGGGCCCTTGCCTTGGGACAAGCTCTGTGGCCTTGCTGGACCAG +
Preference number: 5 (lower is better)
Translates to: PRRRLTSPACFGSGG*GPCLGTSSVALLDQ
Trigger: CTGGTCCAGCAAGGCCACAGAGCTTGTCCCAAGGCAAGGGCCGCAGCCGCCGGAGCCGAAACAAGCAGGAGAAGTCAGCCTCCTCCTTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000021957.8
ENSMUST00000224249.2
ENSMUST00000225240.3
CDS CCA 90 bp GTTTCGGCTCCGGCGGCTGCGGCCCTTGCCTTGGGACAAGCTCTGTaGCCTTGCTGGACCAGGGGTCTGCTCAGATTCCTGCTCCAGAGT +
Preference number: 5 (lower is better)
Translates to: VSAPAAAALALGQAL*PCWTRGLLRFLLQS
Trigger: ACTCTGGAGCAGGAATCTGAGCAGACCCCTGGTCCAGCAAGGCCACAGAGCTTGTCCCAAGGCAAGGGCCGCAGCCGCCGGAGCCGAAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021957.8
ENSMUST00000224249.2
ENSMUST00000225240.3
CDS-3UTR CAA 90 bp AGCCCAGCCCCGGGCTCTGAGTGCAGGCAGCGTAGCACCAGGAAGTGGCTTTGCGCAGCGAGTGGCGCATaGTGGCCGAAGAACTCACAG +
Preference number: 5 (lower is better)
Translates to: SPAPGSECRQRSTRKWLCAASGA*WPKNSQ
Trigger: CTGTGAGTTCTTCGGCCACAATGCGCCACTCGCTGC...GCAAAGCCACTTCCTGGTGCTACGCTGCCTGCACTCAGAGCCCGGGGCTGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021957.8
CDS CCA 90 bp GGATGGCAGGAGGACTCCCAAGCGAGCTGCCTGGCACAGCCCCGCTaGAGTGTGGGGAGTTCCAGAGGCCTGAGAGCTTATGTGCTGACA +
Preference number: 5 (lower is better)
Translates to: GWQEDSQASCLAQPR*SVGSSRGLRAYVLT
Trigger: TGTCAGCACATAAGCTCTCAGGCCTCTGGAACTCCCCACACTCCAGCGGGGCTGTGCCAGGCAGCTCGCTTGGGAGTCCTCCTGCCATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CAA 90 bp ACCAGGAAGTGGCTTTGCCGAGGTCCTCACAGGCCCCAGCACAGCATGGCGTCCGCGCTGTTGGGGACTTaGGGCTCCGTGCTGTTGATG +
Preference number: 5 (lower is better)
Translates to: TRKWLCRGPHRPQHSMASALLGT*GSVLLM
Trigger: CATCAACAGCACGGAGCCCAAAGTCCCCAACAGCGC...GGACGCCATGCTGTGCTGGGGCCTGTGAGGACCTCGGCAAAGCCACTTCCTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021957.8
CDS-3UTR CAA 90 bp GGGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCTGCAGGCAGCCCTGGCGCTGTaGGGGACTTTGGGCTCCGTG +
Preference number: 5 (lower is better)
Translates to: GSRTGQDRWQGTSELHLQAALAL*GTLGSV
Trigger: CACGGAGCCCAAAGTCCCCAACAGCGCCAGGGCTGC...CTGCAGATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021957.8
CDS-3UTR CAA 90 bp GTGGTGGGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCGGCTGTCAGCCTGAATaGGTCCTGGCCGGCTCCCCG +
Preference number: 5 (lower is better)
Translates to: VVGAGQVKTGGRARQNYIGCQPE*VLAGSP
Trigger: CGGGGAGCCGGCCAGGACCAATTCAGGCTGACAGCC...GATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCCACCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CAA 90 bp ACAGGCCCCAGCACAGCATGGCGTCCATTCAGCTTTTGGTTGGTCAGGGTGGTGGGCTGTCAGCCTGAATaGGTCCTGGCCGGCTCCCCG +
Preference number: 5 (lower is better)
Translates to: TGPSTAWRPFSFWLVRVVGCQPE*VLAGSP
Trigger: CGGGGAGCCGGCCAGGACCAATTCAGGCTGACAGCC...CACCACCCTGACCAACCAAAAGCTGAATGGACGCCATGCTGTGCTGGGGCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CAA 90 bp GGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCTGCAGCCGGCGGCTGCGGCCCTaGCCTTGGGACAAGCTCTGT +
Preference number: 5 (lower is better)
Translates to: GAGQVKTGGRARQNYICSRRLRP*PWDKLC
Trigger: ACAGAGCTTGTCCCAAGGCAAGGGCCGCAGCCGCCG...GCTGCAGATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CAA 90 bp GGGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCTGCAGCGGCGGCTGCGGCCCTaGCCTTGGGACAAGCTCTGT +
Preference number: 5 (lower is better)
Translates to: GSRTGQDRWQGTSELHLQRRLRP*PWDKLC
Trigger: ACAGAGCTTGTCCCAAGGCAAGGGCCGCAGCCGCCG...CTGCAGATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS TCA 90 bp GGGATACCAGGAGGTGGGCCCCTCACCTCTGTCCATGGTGGTGGGTaGGGGTCTCTCCTTTCTGCCCAAGGTGGGACTGGTTCACTTGGG +
Preference number: 5 (lower is better)
Translates to: GIPGGGPLTSVHGGG*GSLLSAQGGTGSLG
Trigger: CCCAAGTGAACCAGTCCCACCTTGGGCAGAAAGGAGAGACCCTCACCCACCACCATGGACAGAGGTGAGGGGCCCACCTCCTGGTATCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000021957.8
ENSMUST00000224249.2
ENSMUST00000225240.3
CDS GCA 90 bp GACAAGCTCTGTGGCCTTGCTGGACCAGGGGTCTGCTCAGATTCCTaGTCCAGAGTCCGTGCCTTGGCCCCACCTGGCCAATTCTGCCAG +
Preference number: 5 (lower is better)
Translates to: DKLCGLAGPGVCSDS*SRVRALAPPGQFCQ
Trigger: CTGGCAGAATTGGCCAGGTGGGGCCAAGGCACGGACTCTGGAGCAGGAATCTGAGCAGACCCCTGGTCCAGCAAGGCCACAGAGCTTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000021957.8
ENSMUST00000224249.2
ENSMUST00000225240.3
CDS CCA 90 bp TCCTGCAAGCGGCTGCTCAAGAAGCTATTGACGCGGTCCAGTTCCTaGTCAGGCCACTCTAGGAGCCTCTCCCTGGCAGGCCTTGGCTCC +
Preference number: 5 (lower is better)
Translates to: SCKRLLKKLLTRSSS*SGHSRSLSLAGLGS
Trigger: GGAGCCAAGGCCTGCCAGGGAGAGGCTCCTAGAGTGGCCTGACCAGGAACTGGACCGCGTCAATAGCTTCTTGAGCAGCCGCTTGCAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS CCA 90 bp CCCATTCTCAGGGATACCAGGAGGTGGGCCCCTCACCTCTGTCCATaGTGGTGGGTGAGGGTCTCTCCTTTCTGCCCAAGGTGGGACTGG +
Preference number: 5 (lower is better)
Translates to: PILRDTRRWAPHLCP*WWVRVSPFCPRWDW
Trigger: CCAGTCCCACCTTGGGCAGAAAGGAGAGACCCTCACCCACCACCATGGACAGAGGTGAGGGGCCCACCTCCTGGTATCCCTGAGAATGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021957.8
ENSMUST00000224249.2
ENSMUST00000225240.3
CDS CCA 90 bp TTGGCAGGCTCTGAGCCCTTGCTGGGCTGCTTGGGGCTAGATACCTaGCTCTTGGCACCGGAAGCCTCTAGATTGGCTGGTGACCAGGGG +
Preference number: 5 (lower is better)
Translates to: LAGSEPLLGCLGLDT*LLAPEASRLAGDQG
Trigger: CCCCTGGTCACCAGCCAATCTAGAGGCTTCCGGTGCCAAGAGCCAGGTATCTAGCCCCAAGCAGCCCAGCAAGGGCTCAGAGCCTGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021957.8
ENSMUST00000224249.2
ENSMUST00000225240.3
CDS-3UTR CAA 90 bp GGCCCCAGCACAGCATGGCGTCCATTCAGCTTTTGGTTGGTCAGGGTGGTGGGAGCACCACTGCCCACTTaGGCAGGCTCTGAGCCCTTG +
Preference number: 5 (lower is better)
Translates to: GPSTAWRPFSFWLVRVVGAPLPT*AGSEPL
Trigger: CAAGGGCTCAGAGCCTGCCAAAGTGGGCAGTGGTGC...TCCCACCACCCTGACCAACCAAAAGCTGAATGGACGCCATGCTGTGCTGGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS GCA 90 bp CCAGTGGGGCTGTTAGGGGGAGCAGTAAGGTCTGAGTGCTGGTGGTaGTCCGAGACAGGGAAAGCCTCACCAAGGATGGCAGGAGGACTC +
Preference number: 5 (lower is better)
Translates to: PVGLLGGAVRSECWW*SETGKASPRMAGGL
Trigger: GAGTCCTCCTGCCATCCTTGGTGAGGCTTTCCCTGTCTCGGAGCACCACCAGCACTCAGACCTTACTGCTCCCCCTAACAGCCCCACTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS GCA 90 bp TCTGCACCACTGCCCACTTTGGCAGGCTCTGAGCCCTTGCTGGGCTaGTTGGGGCTAGATACCTGGCTCTTGGCACCGGAAGCCTCTAGA +
Preference number: 5 (lower is better)
Translates to: SAPLPTLAGSEPLLG*LGLDTWLLAPEASR
Trigger: TCTAGAGGCTTCCGGTGCCAAGAGCCAGGTATCTAGCCCCAAGCAGCCCAGCAAGGGCTCAGAGCCTGCCAAAGTGGGCAGTGGTGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021957.8
ENSMUST00000224249.2
ENSMUST00000225240.3
CDS GCA 90 bp TCTTTGGGCAGGAACACATCGTCCAAGGAGGAGGCTGACTTCTCCTaGTTGTTTCGGCTCCGGCGGCTGCGGCCCTTGCCTTGGGACAAG +
Preference number: 5 (lower is better)
Translates to: SLGRNTSSKEEADFS*LFRLRRLRPLPWDK
Trigger: CTTGTCCCAAGGCAAGGGCCGCAGCCGCCGGAGCCGAAACAAGCAGGAGAAGTCAGCCTCCTCCTTGGACGATGTGTTCCTGCCCAAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS CCA 90 bp GGACCAGTGGGGCTGTTAGGGGGAGCAGTAAGGTCTGAGTGCTGGTaGTGCTCCGAGACAGGGAAAGCCTCACCAAGGATGGCAGGAGGA +
Preference number: 5 (lower is better)
Translates to: GPVGLLGGAVRSECW*CSETGKASPRMAGG
Trigger: TCCTCCTGCCATCCTTGGTGAGGCTTTCCCTGTCTCGGAGCACCACCAGCACTCAGACCTTACTGCTCCCCCTAACAGCCCCACTGGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS CCA 90 bp GGAGGACCAGTGGGGCTGTTAGGGGGAGCAGTAAGGTCTGAGTGCTaGTGGTGCTCCGAGACAGGGAAAGCCTCACCAAGGATGGCAGGA +
Preference number: 5 (lower is better)
Translates to: GGPVGLLGGAVRSEC*WCSETGKASPRMAG
Trigger: TCCTGCCATCCTTGGTGAGGCTTTCCCTGTCTCGGAGCACCACCAGCACTCAGACCTTACTGCTCCCCCTAACAGCCCCACTGGTCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS CCA 90 bp CTCAGGGATACCAGGAGGTGGGCCCCTCACCTCTGTCCATGGTGGTaGGTGAGGGTCTCTCCTTTCTGCCCAAGGTGGGACTGGTTCACT +
Preference number: 5 (lower is better)
Translates to: LRDTRRWAPHLCPWW*VRVSPFCPRWDWFT
Trigger: AGTGAACCAGTCCCACCTTGGGCAGAAAGGAGAGACCCTCACCCACCACCATGGACAGAGGTGAGGGGCCCACCTCCTGGTATCCCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021957.8
ENSMUST00000224249.2
ENSMUST00000225240.3
CDS CCA 90 bp ACAAGTCTGTACAGACTGGCTGGAGGTAGGGGGAACCTGAGGGCCTaGAGCCAGCTTGGGCTCTTCTTCCTCTCGGGGACCGTCGCAATC +
Preference number: 5 (lower is better)
Translates to: TSLYRLAGGRGNLRA*SQLGLFFLSGTVAI
Trigger: GATTGCGACGGTCCCCGAGAGGAAGAAGAGCCCAAGCTGGCTCCAGGCCCTCAGGTTCCCCCTACCTCCAGCCAGTCTGTACAGACTTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000225240.3
CDS-3UTR CAA 90 bp CAAACACAAAGAGAGCAGGTTTGGGCCAGCAGTCCCACCAGCCCTTGCTCACAGTCCGCCTGGTCAGCCTaGAGCGGAGCTTCTCCCGGA +
Preference number: 5 (lower is better)
Translates to: QTQREQVWASSPTSPCSQSAWSA*SGASPG
Trigger: TCCGGGAGAAGCTCCGCTCAAGGCTGACCAGGCGGA...CTGTGAGCAAGGGCTGGTGGGACTGCTGGCCCAAACCTGCTCTCTTTGTGTTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021957.8
CDS-3UTR CAA 90 bp AGCCCAGCCCCGGGCTCTGAGTGCAGGCAGCGTAGCACCAGGAAGTGGCTTTGCACCAGGGGGCTGGACTaGCCAAAGTCTTCTTTGCTT +
Preference number: 5 (lower is better)
Translates to: SPAPGSECRQRSTRKWLCTRGLD*PKSSLL
Trigger: AAGCAAAGAAGACTTTGGCAAGTCCAGCCCCCTGGT...GCAAAGCCACTTCCTGGTGCTACGCTGCCTGCACTCAGAGCCCGGGGCTGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CAA 90 bp GTGGTGGGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCCCGGAAGCCTCTAGATaGGCTGGTGACCAGGGGGCT +
Preference number: 5 (lower is better)
Translates to: VVGAGQVKTGGRARQNYIPEASR*AGDQGA
Trigger: AGCCCCCTGGTCACCAGCCAATCTAGAGGCTTCCGG...GATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCCACCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CAA 90 bp CCTCACAGGCCCCAGCACAGCATGGCGTCCATTCAGCTTTTGGTTGGTCAGGGTGCACCACTGCCCACTTaGGCAGGCTCTGAGCCCTTG +
Preference number: 5 (lower is better)
Translates to: PHRPQHSMASIQLLVGQGAPLPT*AGSEPL
Trigger: CAAGGGCTCAGAGCCTGCCAAAGTGGGCAGTGGTGC...ACCCTGACCAACCAAAAGCTGAATGGACGCCATGCTGTGCTGGGGCCTGTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CAA 90 bp AACACAAAGAGAGCAGGTTTGGGCCAGCAGTCCCACCAGCCCTTGCTCACAGGCGCTGACTTCTCCTGCTaGTTTCGGCTCCGGCGGCTG +
Preference number: 5 (lower is better)
Translates to: NTKRAGLGQQSHQPLLTGADFSC*FRLRRL
Trigger: CAGCCGCCGGAGCCGAAACAAGCAGGAGAAGTCAGC...GCCTGTGAGCAAGGGCTGGTGGGACTGCTGGCCCAAACCTGCTCTCTTTGTGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CAA 90 bp ACAGGCCCCAGCACAGCATGGCGTCCATTCAGCTTTTGGTTGGTCAGGGTGGTGGCTGACTTCTCCTGCTaGTTTCGGCTCCGGCGGCTG +
Preference number: 5 (lower is better)
Translates to: TGPSTAWRPFSFWLVRVVADFSC*FRLRRL
Trigger: CAGCCGCCGGAGCCGAAACAAGCAGGAGAAGTCAGC...CACCACCCTGACCAACCAAAAGCTGAATGGACGCCATGCTGTGCTGGGGCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS GCA 90 bp CCTTGCTGGACCAGGGGTCTGCTCAGATTCCTGCTCCAGAGTCCGTaGCTTGGCCCCACCTGGCCAATTCTGCCAGGAACTACCCTTCTT +
Preference number: 5 (lower is better)
Translates to: PCWTRGLLRFLLQSP*LGPTWPILPGTTLL
Trigger: AAGAAGGGTAGTTCCTGGCAGAATTGGCCAGGTGGGGCCAAGGCACGGACTCTGGAGCAGGAATCTGAGCAGACCCCTGGTCCAGCAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000021957.8
ENSMUST00000224249.2
ENSMUST00000225240.3
CDS CCA 90 bp GGGAGTTCCAGAGGCCTGAGAGCTTATGTGCTGACAGGAACGAGCTaGGATCCCAGTCCCCTGAGTTCCCATGGCAGGAAGAGGAGGAGG +
Preference number: 5 (lower is better)
Translates to: GSSRGLRAYVLTGTS*DPSPLSSHGRKRRR
Trigger: CCTCCTCCTCTTCCTGCCATGGGAACTCAGGGGACTGGGATCCCAGCTCGTTCCTGTCAGCACATAAGCTCTCAGGCCTCTGGAACTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS CCA 90 bp ATTCTCAGGGATACCAGGAGGTGGGCCCCTCACCTCTGTCCATGGTaGTGGGTGAGGGTCTCTCCTTTCTGCCCAAGGTGGGACTGGTTC +
Preference number: 5 (lower is better)
Translates to: ILRDTRRWAPHLCPW*WVRVSPFCPRWDWF
Trigger: GAACCAGTCCCACCTTGGGCAGAAAGGAGAGACCCTCACCCACCACCATGGACAGAGGTGAGGGGCCCACCTCCTGGTATCCCTGAGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021957.8
ENSMUST00000224249.2
ENSMUST00000225240.3
CDS CCA 90 bp CTGGACCAGGGGTCTGCTCAGATTCCTGCTCCAGAGTCCGTGCCTTaGCCCCACCTGGCCAATTCTGCCAGGAACTACCCTTCTTGTCAG +
Preference number: 5 (lower is better)
Translates to: LDQGSAQIPAPESVP*PHLANSARNYPSCQ
Trigger: CTGACAAGAAGGGTAGTTCCTGGCAGAATTGGCCAGGTGGGGCCAAGGCACGGACTCTGGAGCAGGAATCTGAGCAGACCCCTGGTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000021957.8
ENSMUST00000224249.2
ENSMUST00000225240.3
CDS-3UTR CAA 90 bp AACACAAAGAGAGCAGGTTTGGGCCAGCAGTCCCACCAGCCCTTGCTCACAGGCGCAAATTTGTGCCCCTaGCACCCAGGGTCCCTGCTG +
Preference number: 5 (lower is better)
Translates to: NTKRAGLGQQSHQPLLTGANLCP*HPGSLL
Trigger: CAGCAGGGACCCTGGGTGCAAGGGGCACAAATTTGC...GCCTGTGAGCAAGGGCTGGTGGGACTGCTGGCCCAAACCTGCTCTCTTTGTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CAA 90 bp GTGGTGGGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCGCAAATTTGTGCCCCTaGCACCCAGGGTCCCTGCTG +
Preference number: 5 (lower is better)
Translates to: VVGAGQVKTGGRARQNYIANLCP*HPGSLL
Trigger: CAGCAGGGACCCTGGGTGCAAGGGGCACAAATTTGC...GATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCCACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CAA 90 bp CTCACAGGCCCCAGCACAGCATGGCGTCCATTCAGCTTTTGGTTGGTCAGGGTGCCTGGCTTGGGTGTCTaGACCCAGATCACCCTGGAC +
Preference number: 5 (lower is better)
Translates to: LTGPSTAWRPFSFWLVRVPGLGV*TQITLD
Trigger: GTCCAGGGTGATCTGGGTCAAGACACCCAAGCCAGG...CACCCTGACCAACCAAAAGCTGAATGGACGCCATGCTGTGCTGGGGCCTGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CAA 90 bp AGCCCAGCCCCGGGCTCTGAGTGCAGGCAGCGTAGCACCAGGAAGTGGCTTTGCGTCTCTTGCTCTTTTTaGGCTTTCCACCTGTGGCCA +
Preference number: 5 (lower is better)
Translates to: SPAPGSECRQRSTRKWLCVSCSF*AFHLWP
Trigger: TGGCCACAGGTGGAAAGCCAAAAAAGAGCAAGAGAC...GCAAAGCCACTTCCTGGTGCTACGCTGCCTGCACTCAGAGCCCGGGGCTGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CAA 90 bp TGGGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCTGCACCGGAAGCCTCTAGATaGGCTGGTGACCAGGGGGCT +
Preference number: 5 (lower is better)
Translates to: WEQDRSRQVAGHVRTTSAPEASR*AGDQGA
Trigger: AGCCCCCTGGTCACCAGCCAATCTAGAGGCTTCCGG...TGCAGATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CAA 90 bp GAAACCAAACACAAAGAGAGCAGGTTTGGGCCAGCAGTCCCACCAGCCCTTGCTGCTGCGGCCCTTGCCTaGGGACAAGCTCTGTGGCCT +
Preference number: 5 (lower is better)
Translates to: ETKHKESRFGPAVPPALAAAALA*GQALWP
Trigger: AGGCCACAGAGCTTGTCCCAAGGCAAGGGCCGCAGC...AGCAAGGGCTGGTGGGACTGCTGGCCCAAACCTGCTCTCTTTGTGTTTGGTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CAA 90 bp GCCCCGGGCTCTGAGTGCAGGCAGCGTAGCACCAGGAAGTGGCTTTGCCGAGGTCTAGGAGTGGTTTTCTaGAGGCTGAAGTTGGTCCAG +
Preference number: 5 (lower is better)
Translates to: APGSECRQRSTRKWLCRGLGVVF*RLKLVQ
Trigger: CTGGACCAACTTCAGCCTCAAGAAAACCACTCCTAG...ACCTCGGCAAAGCCACTTCCTGGTGCTACGCTGCCTGCACTCAGAGCCCGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CAA 90 bp GGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCTGCAGCCCACTGTGTGCAAATTaGTGCCCCTTGCACCCAGGG +
Preference number: 5 (lower is better)
Translates to: GAGQVKTGGRARQNYICSPLCAN*CPLHPG
Trigger: CCCTGGGTGCAAGGGGCACAAATTTGCACACAGTGG...GCTGCAGATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CAA 90 bp GGGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCTGCAGTCCTTCTTTTTCAGCTaGTGCCGGGCCCGCTTGGCA +
Preference number: 5 (lower is better)
Translates to: GSRTGQDRWQGTSELHLQSFFFS*CRARLA
Trigger: TGCCAAGCGGGCCCGGCACAAGCTGAAAAAGAAGGA...CTGCAGATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000021957.8
CDS-3UTR CAA 90 bp ACAGGCCCCAGCACAGCATGGCGTCCATTCAGCTTTTGGTTGGTCAGGGTGGTGGTGGGACTGGTTCACTaGGGGCTTGTAACGTGTGGC +
Preference number: 5 (lower is better)
Translates to: TGPSTAWRPFSFWLVRVVVGLVH*GLVTCG
Trigger: GCCACACGTTACAAGCCCCAAGTGAACCAGTCCCAC...CACCACCCTGACCAACCAAAAGCTGAATGGACGCCATGCTGTGCTGGGGCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CAA 90 bp TGGGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCTGCACCTGGCTTGGGTGTCTaGACCCAGATCACCCTGGAC +
Preference number: 5 (lower is better)
Translates to: WEQDRSRQVAGHVRTTSAPGLGV*TQITLD
Trigger: GTCCAGGGTGATCTGGGTCAAGACACCCAAGCCAGG...TGCAGATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CAA 90 bp GTGGTGGGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCTCCTCAGAGCTTGGGTaGCCTGGCTTGGGTGTCTTG +
Preference number: 5 (lower is better)
Translates to: VVGAGQVKTGGRARQNYISSELG*PGLGVL
Trigger: CAAGACACCCAAGCCAGGCAACCCAAGCTCTGAGGA...GATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCCACCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CAA 90 bp GGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCTGCAGCTCCTCAGAGCTTGGGTaGCCTGGCTTGGGTGTCTTG +
Preference number: 5 (lower is better)
Translates to: GAGQVKTGGRARQNYICSSSELG*PGLGVL
Trigger: CAAGACACCCAAGCCAGGCAACCCAAGCTCTGAGGA...GCTGCAGATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CAA 90 bp AGCCCAGCCCCGGGCTCTGAGTGCAGGCAGCGTAGCACCAGGAAGTGGCTTTGCTTCTCTTTTTCCGCATaGTGGCCGAAGAACTCACAG +
Preference number: 5 (lower is better)
Translates to: SPAPGSECRQRSTRKWLCFSFSA*WPKNSQ
Trigger: CTGTGAGTTCTTCGGCCACAATGCGGAAAAAGAGAA...GCAAAGCCACTTCCTGGTGCTACGCTGCCTGCACTCAGAGCCCGGGGCTGGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000225240.3
CDS TCA 90 bp GAAGTCAGGGGGCAGCTTCTCACCCTGCAACACCAGTCCATTTTGTaGAGGGCCTTCTTCCCAGCCTTTGCGCTCACGGTGACACAGCAG +
Preference number: 5 (lower is better)
Translates to: EVRGQLLTLQHQSIL*RAFFPAFALTVTQQ
Trigger: CTGCTGTGTCACCGTGAGCGCAAAGGCTGGGAAGAAGGCCCTTCACAAAATGGACTGGTGTTGCAGGGTGAGAAGCTGCCCCCTGACTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000225240.3
CDS-3UTR CAA 90 bp CAAACACAAAGAGAGCAGGTTTGGGCCAGCAGTCCCACCAGCCCTTGCTCACAGGTGGGACTGGTTCACTaGGGGCTTGTAACGTGTGGC +
Preference number: 5 (lower is better)
Translates to: QTQREQVWASSPTSPCSQVGLVH*GLVTCG
Trigger: GCCACACGTTACAAGCCCCAAGTGAACCAGTCCCAC...CTGTGAGCAAGGGCTGGTGGGACTGCTGGCCCAAACCTGCTCTCTTTGTGTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CAA 90 bp CAGGGTGGTGGGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTAATCACCCTGGACAGGTaGGGCACAGTGTTGAGTCTT +
Preference number: 5 (lower is better)
Translates to: QGGGSRTGQDRWQGTSELITLDR*GTVLSL
Trigger: AAGACTCAACACTGTGCCCAACCTGTCCAGGGTGAT...TAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCCACCACCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CAA 90 bp GGCCCCAGCACAGCATGGCGTCCATTCAGCTTTTGGTTGGTCAGGGTGGTGGGAACCAGGGGGCTGGACTaGCCAAAGTCTTCTTTGCTT +
Preference number: 5 (lower is better)
Translates to: GPSTAWRPFSFWLVRVVGTRGLD*PKSSLL
Trigger: AAGCAAAGAAGACTTTGGCAAGTCCAGCCCCCTGGT...TCCCACCACCCTGACCAACCAAAAGCTGAATGGACGCCATGCTGTGCTGGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS GCA 90 bp TCCCTGGCAGGCCTTGGCTCCTGGCTTCCAGAAACACGATTCACCTaGTTCAGAGCTTCTGTGGCCAACCGAGCCTTCTCTTTTTCCGCA +
Preference number: 5 (lower is better)
Translates to: SLAGLGSWLPETRFT*FRASVANRAFSFSA
Trigger: TGCGGAAAAAGAGAAGGCTCGGTTGGCCACAGAAGCTCTGAAGCAGGTGAATCGTGTTTCTGGAAGCCAGGAGCCAAGGCCTGCCAGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000225240.3
CDS-3UTR CAA 90 bp GGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCTGCAGCTTGGGCTCCGTGCTGTaGATGAATTCCAGCAGCTCA +
Preference number: 5 (lower is better)
Translates to: GAGQVKTGGRARQNYICSLGSVL*MNSSSS
Trigger: TGAGCTGCTGGAATTCATCAACAGCACGGAGCCCAA...GCTGCAGATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021957.8
CDS-3UTR CAA 90 bp TGGTGGGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCTTCCTTGACAGTGCTCTaGATCTCCTGCAAGCGGCTG +
Preference number: 5 (lower is better)
Translates to: WWEQDRSRQVAGHVRTTSSLTVL*ISCKRL
Trigger: CAGCCGCTTGCAGGAGATCAAGAGCACTGTCAAGGA...AGATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCCACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CAA 90 bp CAAACACAAAGAGAGCAGGTTTGGGCCAGCAGTCCCACCAGCCCTTGCTCACAGTCCTTGACAGTGCTCTaGATCTCCTGCAAGCGGCTG +
Preference number: 5 (lower is better)
Translates to: QTQREQVWASSPTSPCSQSLTVL*ISCKRL
Trigger: CAGCCGCTTGCAGGAGATCAAGAGCACTGTCAAGGA...CTGTGAGCAAGGGCTGGTGGGACTGCTGGCCCAAACCTGCTCTCTTTGTGTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CAA 90 bp CAAACACAAAGAGAGCAGGTTTGGGCCAGCAGTCCCACCAGCCCTTGCTCACAGGCACAGAGGGAGTCCTaGACAGTGCTCTTGATCTCC +
Preference number: 5 (lower is better)
Translates to: QTQREQVWASSPTSPCSQAQRES*TVLLIS
Trigger: GGAGATCAAGAGCACTGTCAAGGACTCCCTCTGTGC...CTGTGAGCAAGGGCTGGTGGGACTGCTGGCCCAAACCTGCTCTCTTTGTGTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CAA 90 bp TGGGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCTGCAGCACAGAGGGAGTCCTaGACAGTGCTCTTGATCTCC +
Preference number: 5 (lower is better)
Translates to: WEQDRSRQVAGHVRTTSAAQRES*TVLLIS
Trigger: GGAGATCAAGAGCACTGTCAAGGACTCCCTCTGTGC...TGCAGATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CAA 90 bp GGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCTGCAGCAGGTTGGGCACAGTGTaGAGTCTTCTCACAAGCCCA +
Preference number: 5 (lower is better)
Translates to: GAGQVKTGGRARQNYICSRLGTV*SLLTSP
Trigger: TGGGCTTGTGAGAAGACTCAACACTGTGCCCAACCT...GCTGCAGATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CAA 90 bp CTCACAGGCCCCAGCACAGCATGGCGTCCATTCAGCTTTTGGTTGGTCAGGGTGAGGTTGGGCACAGTGTaGAGTCTTCTCACAAGCCCA +
Preference number: 5 (lower is better)
Translates to: LTGPSTAWRPFSFWLVRVRLGTV*SLLTSP
Trigger: TGGGCTTGTGAGAAGACTCAACACTGTGCCCAACCT...CACCCTGACCAACCAAAAGCTGAATGGACGCCATGCTGTGCTGGGGCCTGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CAA 90 bp ACAGGCCCCAGCACAGCATGGCGTCCATTCAGCTTTTGGTTGGTCAGGGTGGTGATCACCCTGGACAGGTaGGGCACAGTGTTGAGTCTT +
Preference number: 5 (lower is better)
Translates to: TGPSTAWRPFSFWLVRVVITLDR*GTVLSL
Trigger: AAGACTCAACACTGTGCCCAACCTGTCCAGGGTGAT...CACCACCCTGACCAACCAAAAGCTGAATGGACGCCATGCTGTGCTGGGGCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CAA 90 bp TGGGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCTGCAACCCCATCCAAGTCTTaGGGCAGGAACACATCGTCC +
Preference number: 5 (lower is better)
Translates to: WEQDRSRQVAGHVRTTSATPSKS*GRNTSS
Trigger: GGACGATGTGTTCCTGCCCAAAGACTTGGATGGGGT...TGCAGATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS TCA 90 bp GTCAAGGTTGATGTCAGGCCGTTTCTGAGAGGAGCCACTGAGGTCTaGAGGAGTGAGGGTCTGAGCTTCCACAGTCCCCTCCTTAAACCC +
Preference number: 5 (lower is better)
Translates to: VKVDVRPFLRGATEV*RSEGLSFHSPLLKP
Trigger: GGGTTTAAGGAGGGGACTGTGGAAGCTCAGACCCTCACTCCTTCAGACCTCAGTGGCTCCTCTCAGAAACGGCCTGACATCAACCTTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS TCA 90 bp AGTCCATTTTGTGAAGGGCCTTCTTCCCAGCCTTTGCGCTCACGGTaGCACAGCAGGCAACAAGTCTGTACAGACTGGCTGGAGGTAGGG +
Preference number: 5 (lower is better)
Translates to: SPFCEGPSSQPLRSR*HSRQQVCTDWLEVG
Trigger: CCCTACCTCCAGCCAGTCTGTACAGACTTGTTGCCTGCTGTGTCACCGTGAGCGCAAAGGCTGGGAAGAAGGCCCTTCACAAAATGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225240.3
CDS GCA 90 bp TCCCTGGCAGGCCTTGGCTCCTGGCTTCCAGAAACACGATTCACCTaGTTCAGAGCTTCTGTGGCCAACCGAGCCTTCTCTTTTTCCTTC +
Preference number: 5 (lower is better)
Translates to: SLAGLGSWLPETRFT*FRASVANRAFSFSF
Trigger: GAAGGAAAAAGAGAAGGCTCGGTTGGCCACAGAAGCTCTGAAGCAGGTGAATCGTGTTTCTGGAAGCCAGGAGCCAAGGCCTGCCAGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000021957.8
CDS GCA 90 bp CCTGCAACACCAGTCCATTTTGTGAAGGGCCTTCTTCCCAGCCTTTaGGCTCACGGTGACACAGCAGGCAACAAGTCTGTACAGACTGGC +
Preference number: 5 (lower is better)
Translates to: PATPVHFVKGLLPSL*AHGDTAGNKSVQTG
Trigger: GCCAGTCTGTACAGACTTGTTGCCTGCTGTGTCACCGTGAGCGCAAAGGCTGGGAAGAAGGCCCTTCACAAAATGGACTGGTGTTGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225240.3
CDS-3UTR CAA 90 bp AGCCCAGCCCCGGGCTCTGAGTGCAGGCAGCGTAGCACCAGGAAGTGGCTTTGCTCAGATAATTCCTGTTaGCAACTGGGAACTTCCTTT +
Preference number: 5 (lower is better)
Translates to: SPAPGSECRQRSTRKWLCSDNSC*QLGTSF
Trigger: AAAGGAAGTTCCCAGTTGCAAACAGGAATTATCTGA...GCAAAGCCACTTCCTGGTGCTACGCTGCCTGCACTCAGAGCCCGGGGCTGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CAA 90 bp GAAACCAAACACAAAGAGAGCAGGTTTGGGCCAGCAGTCCCACCAGCCCTTGCTACCCCATCCAAGTCTTaGGGCAGGAACACATCGTCC +
Preference number: 5 (lower is better)
Translates to: ETKHKESRFGPAVPPALATPSKS*GRNTSS
Trigger: GGACGATGTGTTCCTGCCCAAAGACTTGGATGGGGT...AGCAAGGGCTGGTGGGACTGCTGGCCCAAACCTGCTCTCTTTGTGTTTGGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CAA 90 bp CCTCACAGGCCCCAGCACAGCATGGCGTCCATTCAGCTTTTGGTTGGTCAGGGTTCCAAACAGAACCTCTaGAAGTACTCCACCTCTCGG +
Preference number: 5 (lower is better)
Translates to: PHRPQHSMASIQLLVGQGSKQNL*KYSTSR
Trigger: CCGAGAGGTGGAGTACTTCAAGAGGTTCTGTTTGGA...ACCCTGACCAACCAAAAGCTGAATGGACGCCATGCTGTGCTGGGGCCTGTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CAA 90 bp GGGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCTGCAGCTAGGAGTGGTTTTCTaGAGGCTGAAGTTGGTCCAG +
Preference number: 5 (lower is better)
Translates to: GSRTGQDRWQGTSELHLQLGVVF*RLKLVQ
Trigger: CTGGACCAACTTCAGCCTCAAGAAAACCACTCCTAG...CTGCAGATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CAA 90 bp GGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCTGCAGCCCACAAGACTGTGATTaGCAGGATGTGTGTGACAAG +
Preference number: 5 (lower is better)
Translates to: GAGQVKTGGRARQNYICSPQDCD*QDVCDK
Trigger: CTTGTCACACACATCCTGCAAATCACAGTCTTGTGG...GCTGCAGATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CAA 90 bp GGCCCCAGCACAGCATGGCGTCCATTCAGCTTTTGGTTGGTCAGGGTGGTGGGACAAAGTCTTCTTTGCTaGACTTCCCTGTCTCTTGCT +
Preference number: 5 (lower is better)
Translates to: GPSTAWRPFSFWLVRVVGQSLLC*TSLSLA
Trigger: AGCAAGAGACAGGGAAGTCAAGCAAAGAAGACTTTG...TCCCACCACCCTGACCAACCAAAAGCTGAATGGACGCCATGCTGTGCTGGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CAA 90 bp ACCAGGAAGTGGCTTTGCCGAGGTCCTCACAGGCCCCAGCACAGCATGGCGTCCAACTTTCTGACGAGTTaGCTTTGCAGAATCCAAACA +
Preference number: 5 (lower is better)
Translates to: TRKWLCRGPHRPQHSMASNFLTS*LCRIQT
Trigger: TGTTTGGATTCTGCAAAGCAAACTCGTCAGAAAGTT...GGACGCCATGCTGTGCTGGGGCCTGTGAGGACCTCGGCAAAGCCACTTCCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CAA 90 bp TGGTGGGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCTTCGCCTAGGAGATTCTaGACGAGCTTTGGCATGAAG +
Preference number: 5 (lower is better)
Translates to: WWEQDRSRQVAGHVRTTSSPRRF*TSFGMK
Trigger: CTTCATGCCAAAGCTCGTCAAGAATCTCCTAGGCGA...AGATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCCACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225240.3
CDS GCA 90 bp TTCTTGACGAGCTTTGGCATGAAGTCAGGGGGCAGCTTCTCACCCTaGAACACCAGTCCATTTTGTGAAGGGCCTTCTTCCCAGCCTTTG +
Preference number: 5 (lower is better)
Translates to: FLTSFGMKSGGSFSP*NTSPFCEGPSSQPL
Trigger: CAAAGGCTGGGAAGAAGGCCCTTCACAAAATGGACTGGTGTTGCAGGGTGAGAAGCTGCCCCCTGACTTCATGCCAAAGCTCGTCAAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000225240.3
CDS-3UTR CAA 90 bp TGGTGGGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCTCCACAAGACTGTGATTaGCAGGATGTGTGTGACAAG +
Preference number: 5 (lower is better)
Translates to: WWEQDRSRQVAGHVRTTSPQDCD*QDVCDK
Trigger: CTTGTCACACACATCCTGCAAATCACAGTCTTGTGG...AGATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCCACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CAA 90 bp GAAACCAAACACAAAGAGAGCAGGTTTGGGCCAGCAGTCCCACCAGCCCTTGCTTCCAAACAGAACCTCTaGAAGTACTCCACCTCTCGG +
Preference number: 5 (lower is better)
Translates to: ETKHKESRFGPAVPPALASKQNL*KYSTSR
Trigger: CCGAGAGGTGGAGTACTTCAAGAGGTTCTGTTTGGA...AGCAAGGGCTGGTGGGACTGCTGGCCCAAACCTGCTCTCTTTGTGTTTGGTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS GCA 90 bp AAGAGGACGAGGATGAATGAGAGTCACCCCCACAAGACTGTGATTTaGAGGATGTGTGTGACAAGGAGATCGCCACTGCATGGTCTCCAC +
Preference number: 5 (lower is better)
Translates to: KRTRMNESHPHKTVI*RMCVTRRSPLHGLH
Trigger: GTGGAGACCATGCAGTGGCGATCTCCTTGTCACACACATCCTGCAAATCACAGTCTTGTGGGGGTGACTCTCATTCATCCTCGTCCTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CAA 90 bp CAAACACAAAGAGAGCAGGTTTGGGCCAGCAGTCCCACCAGCCCTTGCTCACAGCAAAGTCTTCTTTGCTaGACTTCCCTGTCTCTTGCT +
Preference number: 5 (lower is better)
Translates to: QTQREQVWASSPTSPCSQQSLLC*TSLSLA
Trigger: AGCAAGAGACAGGGAAGTCAAGCAAAGAAGACTTTG...CTGTGAGCAAGGGCTGGTGGGACTGCTGGCCCAAACCTGCTCTCTTTGTGTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS CCA 90 bp GCTTTCCACCTGTGGCCACAGGCTCAGATAATTCCTGTTTGCAACTaGGAACTTCCTTTGAACTTTCCTCAGAGCTTGGGTTGCCTGGCT +
Preference number: 5 (lower is better)
Translates to: AFHLWPQAQIIPVCN*ELPLNFPQSLGCLA
Trigger: AGCCAGGCAACCCAAGCTCTGAGGAAAGTTCAAAGGAAGTTCCCAGTTGCAAACAGGAATTATCTGAGCCTGTGGCCACAGGTGGAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000021957.8
ENSMUST00000224249.2
ENSMUST00000225240.3
CDS-3UTR CAA 90 bp GGTGGGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCTGAACTTTCTGACGAGTTaGCTTTGCAGAATCCAAACA +
Preference number: 5 (lower is better)
Translates to: GGSRTGQDRWQGTSELHLNFLTS*LCRIQT
Trigger: TGTTTGGATTCTGCAAAGCAAACTCGTCAGAAAGTT...CAGATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS-3UTR CAA 90 bp TGGTGGGAGCAGGACAGGTCAAGACAGGTGGCAGGGCACGTCAGAACTACATCTTCAGATAATTCCTGTTaGCAACTGGGAACTTCCTTT +
Preference number: 5 (lower is better)
Translates to: WWEQDRSRQVAGHVRTTSSDNSC*QLGTSF
Trigger: AAAGGAAGTTCCCAGTTGCAAACAGGAATTATCTGA...AGATGTAGTTCTGACGTGCCCTGCCACCTGTCTTGACCTGTCCTGCTCCCACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS CAA 90 bp GGCTCCGGCGGCTGCGGCCCTTGCCTTGGGACAAGCTCTGTGGCCTaGCTGGACCAGGGGTCTGCTCAGATTCCTGCTCCAGAGTCCGTG +
Preference number: 6 (lower is better)
Translates to: GSGGCGPCLGTSSVA*LDQGSAQIPAPESV
Trigger: CACGGACTCTGGAGCAGGAATCTGAGCAGACCCCTGGTCCAGCAAGGCCACAGAGCTTGTCCCAAGGCAAGGGCCGCAGCCGCCGGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021957.8
ENSMUST00000224249.2
ENSMUST00000225240.3
CDS TCA 72 bp GTGGCAGTGGCAGCAGCCATAGGGCACTCTGAAGCCTaGGCGGGGAAAGGTGCCACTGGGGTGGTGGGCAGC +
Preference number: 6 (lower is better)
Translates to: VAVAAAIGHSEA*AGKGATGVVGS
Trigger: GCTGCCCACCACCCCAGTGGCACCTTTCCCCGCTCAGGCTTCAGAGTGCCCTATGGCTGCTGCCACTGCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS GCA 72 bp CCTCACCAAGGATGGCAGGAGGACTCCCAAGCGAGCTaGCTGGCACAGCCCCGCTGGAGTGTGGGGAGTTCC +
Preference number: 6 (lower is better)
Translates to: PHQGWQEDSQAS*LAQPRWSVGSS
Trigger: GGAACTCCCCACACTCCAGCGGGGCTGTGCCAGGCAGCTCGCTTGGGAGTCCTCCTGCCATCCTTGGTGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS CCA 72 bp GCAGTGCCCGCTGCAGGGGTGGCTGCACCCCGAGAGTaGTGGAGGCATCTTCAGGAGTGGCATGCTGGTGGA +
Preference number: 6 (lower is better)
Translates to: AVPAAGVAAPRE*WRHLQEWHAGG
Trigger: TCCACCAGCATGCCACTCCTGAAGATGCCTCCACCACTCTCGGGGTGCAGCCACCCCTGCAGCGGGCACTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS CCA 72 bp CCGGCGGCTGCGGCCCTTGCCTTGGGACAAGCTCTGTaGCCTTGCTGGACCAGGGGTCTGCTCAGATTCCTG +
Preference number: 6 (lower is better)
Translates to: PAAAALALGQAL*PCWTRGLLRFL
Trigger: CAGGAATCTGAGCAGACCCCTGGTCCAGCAAGGCCACAGAGCTTGTCCCAAGGCAAGGGCCGCAGCCGCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021957.8
ENSMUST00000224249.2
ENSMUST00000225240.3
CDS CAA 72 bp CTGCTTGTTTCGGCTCCGGCGGCTGCGGCCCTTGCCTaGGGACAAGCTCTGTGGCCTTGCTGGACCAGGGGT +
Preference number: 6 (lower is better)
Translates to: LLVSAPAAAALA*GQALWPCWTRG
Trigger: ACCCCTGGTCCAGCAAGGCCACAGAGCTTGTCCCAAGGCAAGGGCCGCAGCCGCCGGAGCCGAAACAAGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021957.8
ENSMUST00000224249.2
ENSMUST00000225240.3
CDS CAA 90 bp CGGCTCCCCGGACTGCCCTCTCCAGGTTCTGCACCACTGCCCACTTaGGCAGGCTCTGAGCCCTTGCTGGGCTGCTTGGGGCTAGATACC +
Preference number: 6 (lower is better)
Translates to: RLPGLPSPGSAPLPT*AGSEPLLGCLGLDT
Trigger: GGTATCTAGCCCCAAGCAGCCCAGCAAGGGCTCAGAGCCTGCCAAAGTGGGCAGTGGTGCAGAACCTGGAGAGGGCAGTCCGGGGAGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000021957.8
ENSMUST00000224249.2
ENSMUST00000225240.3
CDS CAA 90 bp GAGGCTGACTTCTCCTGCTTGTTTCGGCTCCGGCGGCTGCGGCCCTaGCCTTGGGACAAGCTCTGTGGCCTTGCTGGACCAGGGGTCTGC +
Preference number: 6 (lower is better)
Translates to: EADFSCLFRLRRLRP*PWDKLCGLAGPGVC
Trigger: GCAGACCCCTGGTCCAGCAAGGCCACAGAGCTTGTCCCAAGGCAAGGGCCGCAGCCGCCGGAGCCGAAACAAGCAGGAGAAGTCAGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021957.8
ENSMUST00000224249.2
ENSMUST00000225240.3
CDS GCA 72 bp TCTCCTGCTTGTTTCGGCTCCGGCGGCTGCGGCCCTTaGCTTGGGACAAGCTCTGTGGCCTTGCTGGACCAG +
Preference number: 6 (lower is better)
Translates to: SPACFGSGGCGP*LGTSSVALLDQ
Trigger: CTGGTCCAGCAAGGCCACAGAGCTTGTCCCAAGGCAAGGGCCGCAGCCGCCGGAGCCGAAACAAGCAGGAGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000021957.8
ENSMUST00000224249.2
ENSMUST00000225240.3
CDS CCA 72 bp CCGAGAGTGGTGGAGGCATCTTCAGGAGTGGCATGCTaGTGGAGGGCGGATGAGGGCTCTGACATGGCCCCG +
Preference number: 6 (lower is better)
Translates to: PRVVEASSGVAC*WRADEGSDMAP
Trigger: CGGGGCCATGTCAGAGCCCTCATCCGCCCTCCACCAGCATGCCACTCCTGAAGATGCCTCCACCACTCTCGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS CAA 72 bp GGACTGCCCTCTCCAGGTTCTGCACCACTGCCCACTTaGGCAGGCTCTGAGCCCTTGCTGGGCTGCTTGGGG +
Preference number: 6 (lower is better)
Translates to: GLPSPGSAPLPT*AGSEPLLGCLG
Trigger: CCCCAAGCAGCCCAGCAAGGGCTCAGAGCCTGCCAAAGTGGGCAGTGGTGCAGAACCTGGAGAGGGCAGTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000021957.8
ENSMUST00000224249.2
ENSMUST00000225240.3
CDS TCA 72 bp GGGTGGTGGGCAGCGGGGGTGGGTAGGACGCCGAGCTaGAGGAACCAGGGTGAGAAGGAATCAGAGATGCTG +
Preference number: 6 (lower is better)
Translates to: GWWAAGVGRTPS*RNQGEKESEML
Trigger: CAGCATCTCTGATTCCTTCTCACCCTGGTTCCTTCAGCTCGGCGTCCTACCCACCCCCGCTGCCCACCACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS GCA 72 bp ACCCCGAGAGTGGTGGAGGCATCTTCAGGAGTGGCATaGTGGTGGAGGGCGGATGAGGGCTCTGACATGGCC +
Preference number: 6 (lower is better)
Translates to: TPRVVEASSGVA*WWRADEGSDMA
Trigger: GGCCATGTCAGAGCCCTCATCCGCCCTCCACCAGCATGCCACTCCTGAAGATGCCTCCACCACTCTCGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS GCA 72 bp TGTGGCCTTGCTGGACCAGGGGTCTGCTCAGATTCCTaGTCCAGAGTCCGTGCCTTGGCCCCACCTGGCCAA +
Preference number: 6 (lower is better)
Translates to: CGLAGPGVCSDS*SRVRALAPPGQ
Trigger: TTGGCCAGGTGGGGCCAAGGCACGGACTCTGGAGCAGGAATCTGAGCAGACCCCTGGTCCAGCAAGGCCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000021957.8
ENSMUST00000224249.2
ENSMUST00000225240.3
CDS CCA 72 bp ACCAGGAGGTGGGCCCCTCACCTCTGTCCATGGTGGTaGGTGAGGGTCTCTCCTTTCTGCCCAAGGTGGGAC +
Preference number: 6 (lower is better)
Translates to: TRRWAPHLCPWW*VRVSPFCPRWD
Trigger: GTCCCACCTTGGGCAGAAAGGAGAGACCCTCACCCACCACCATGGACAGAGGTGAGGGGCCCACCTCCTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021957.8
ENSMUST00000224249.2
ENSMUST00000225240.3
CDS CCA 72 bp TACAGACTGGCTGGAGGTAGGGGGAACCTGAGGGCCTaGAGCCAGCTTGGGCTCTTCTTCCTCTCGGGGACC +
Preference number: 6 (lower is better)
Translates to: YRLAGGRGNLRA*SQLGLFFLSGT
Trigger: GGTCCCCGAGAGGAAGAAGAGCCCAAGCTGGCTCCAGGCCCTCAGGTTCCCCCTACCTCCAGCCAGTCTGTA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000225240.3
CDS CAA 72 bp AGCTTGTGCCGGGCCCGCTTGGCAGCCCTGGCGCTGTaGGGGACTTTGGGCTCCGTGCTGTTGATGAATTCC +
Preference number: 6 (lower is better)
Translates to: SLCRARLAALAL*GTLGSVLLMNS
Trigger: GGAATTCATCAACAGCACGGAGCCCAAAGTCCCCAACAGCGCCAGGGCTGCCAAGCGGGCCCGGCACAAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021957.8
CDS CAA 72 bp TTCTCCTGCTTGTTTCGGCTCCGGCGGCTGCGGCCCTaGCCTTGGGACAAGCTCTGTGGCCTTGCTGGACCA +
Preference number: 6 (lower is better)
Translates to: FSCLFRLRRLRP*PWDKLCGLAGP
Trigger: TGGTCCAGCAAGGCCACAGAGCTTGTCCCAAGGCAAGGGCCGCAGCCGCCGGAGCCGAAACAAGCAGGAGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000021957.8
ENSMUST00000224249.2
ENSMUST00000225240.3
CDS CAA 90 bp GGCTCTGAGCCCTTGCTGGGCTGCTTGGGGCTAGATACCTGGCTCTaGGCACCGGAAGCCTCTAGATTGGCTGGTGACCAGGGGGCTGGA +
Preference number: 6 (lower is better)
Translates to: GSEPLLGCLGLDTWL*APEASRLAGDQGAG
Trigger: TCCAGCCCCCTGGTCACCAGCCAATCTAGAGGCTTCCGGTGCCAAGAGCCAGGTATCTAGCCCCAAGCAGCCCAGCAAGGGCTCAGAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000021957.8
ENSMUST00000224249.2
ENSMUST00000225240.3
CDS CAA 90 bp TTGGGCAGGAACACATCGTCCAAGGAGGAGGCTGACTTCTCCTGCTaGTTTCGGCTCCGGCGGCTGCGGCCCTTGCCTTGGGACAAGCTC +
Preference number: 6 (lower is better)
Translates to: LGRNTSSKEEADFSC*FRLRRLRPLPWDKL
Trigger: GAGCTTGTCCCAAGGCAAGGGCCGCAGCCGCCGGAGCCGAAACAAGCAGGAGAAGTCAGCCTCCTCCTTGGACGATGTGTTCCTGCCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS CCA 72 bp CTGTTGATGAATTCCAGCAGCTCATCCACATCTCGGTaGTCCACCGCAGGCTCCCCAGGGATCCCGCCCAGG +
Preference number: 6 (lower is better)
Translates to: LLMNSSSSSTSR*STAGSPGIPPR
Trigger: CCTGGGCGGGATCCCTGGGGAGCCTGCGGTGGACCACCGAGATGTGGATGAGCTGCTGGAATTCATCAACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021957.8
CDS CCA 72 bp GATACCAGGAGGTGGGCCCCTCACCTCTGTCCATGGTaGTGGGTGAGGGTCTCTCCTTTCTGCCCAAGGTGG +
Preference number: 6 (lower is better)
Translates to: DTRRWAPHLCPW*WVRVSPFCPRW
Trigger: CCACCTTGGGCAGAAAGGAGAGACCCTCACCCACCACCATGGACAGAGGTGAGGGGCCCACCTCCTGGTATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021957.8
ENSMUST00000224249.2
ENSMUST00000225240.3
CDS CCA 72 bp AGGGATACCAGGAGGTGGGCCCCTCACCTCTGTCCATaGTGGTGGGTGAGGGTCTCTCCTTTCTGCCCAAGG +
Preference number: 6 (lower is better)
Translates to: RDTRRWAPHLCP*WWVRVSPFCPR
Trigger: CCTTGGGCAGAAAGGAGAGACCCTCACCCACCACCATGGACAGAGGTGAGGGGCCCACCTCCTGGTATCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021957.8
ENSMUST00000224249.2
ENSMUST00000225240.3
CDS CCA 72 bp GCGGCCCTTGCCTTGGGACAAGCTCTGTGGCCTTGCTaGACCAGGGGTCTGCTCAGATTCCTGCTCCAGAGT +
Preference number: 6 (lower is better)
Translates to: AALALGQALWPC*TRGLLRFLLQS
Trigger: ACTCTGGAGCAGGAATCTGAGCAGACCCCTGGTCCAGCAAGGCCACAGAGCTTGTCCCAAGGCAAGGGCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021957.8
ENSMUST00000224249.2
ENSMUST00000225240.3
CDS CAA 72 bp GGGGTCTGCTCAGATTCCTGCTCCAGAGTCCGTGCCTaGGCCCCACCTGGCCAATTCTGCCAGGAACTACCC +
Preference number: 6 (lower is better)
Translates to: GVCSDSCSRVRA*APPGQFCQELP
Trigger: GGGTAGTTCCTGGCAGAATTGGCCAGGTGGGGCCAAGGCACGGACTCTGGAGCAGGAATCTGAGCAGACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000021957.8
ENSMUST00000224249.2
ENSMUST00000225240.3
CDS CAA 72 bp AACACATCGTCCAAGGAGGAGGCTGACTTCTCCTGCTaGTTTCGGCTCCGGCGGCTGCGGCCCTTGCCTTGG +
Preference number: 6 (lower is better)
Translates to: NTSSKEEADFSC*FRLRRLRPLPW
Trigger: CCAAGGCAAGGGCCGCAGCCGCCGGAGCCGAAACAAGCAGGAGAAGTCAGCCTCCTCCTTGGACGATGTGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS CAA 90 bp CGCTTGGCAGCCCTGGCGCTGTTGGGGACTTTGGGCTCCGTGCTGTaGATGAATTCCAGCAGCTCATCCACATCTCGGTGGTCCACCGCA +
Preference number: 6 (lower is better)
Translates to: RLAALALLGTLGSVL*MNSSSSSTSRWSTA
Trigger: TGCGGTGGACCACCGAGATGTGGATGAGCTGCTGGAATTCATCAACAGCACGGAGCCCAAAGTCCCCAACAGCGCCAGGGCTGCCAAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021957.8
CDS CAA 90 bp GCACCACTGCCCACTTTGGCAGGCTCTGAGCCCTTGCTGGGCTGCTaGGGGCTAGATACCTGGCTCTTGGCACCGGAAGCCTCTAGATTG +
Preference number: 6 (lower is better)
Translates to: APLPTLAGSEPLLGC*GLDTWLLAPEASRL
Trigger: CAATCTAGAGGCTTCCGGTGCCAAGAGCCAGGTATCTAGCCCCAAGCAGCCCAGCAAGGGCTCAGAGCCTGCCAAAGTGGGCAGTGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021957.8
ENSMUST00000224249.2
ENSMUST00000225240.3
CDS TCA 72 bp AGGACCAGTGGGGCTGTTAGGGGGAGCAGTAAGGTCTaGGTGCTGGTGGTGCTCCGAGACAGGGAAAGCCTC +
Preference number: 6 (lower is better)
Translates to: RTSGAVRGSSKV*VLVVLRDRESL
Trigger: GAGGCTTTCCCTGTCTCGGAGCACCACCAGCACTCAGACCTTACTGCTCCCCCTAACAGCCCCACTGGTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS GCA 72 bp CCAGTGGGGCTGTTAGGGGGAGCAGTAAGGTCTGAGTaGTGGTGGTGCTCCGAGACAGGGAAAGCCTCACCA +
Preference number: 6 (lower is better)
Translates to: PVGLLGGAVRSE*WWCSETGKASP
Trigger: TGGTGAGGCTTTCCCTGTCTCGGAGCACCACCAGCACTCAGACCTTACTGCTCCCCCTAACAGCCCCACTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS GCA 72 bp ACCAGGGGTCTGCTCAGATTCCTGCTCCAGAGTCCGTaGCTTGGCCCCACCTGGCCAATTCTGCCAGGAACT +
Preference number: 6 (lower is better)
Translates to: TRGLLRFLLQSP*LGPTWPILPGT
Trigger: AGTTCCTGGCAGAATTGGCCAGGTGGGGCCAAGGCACGGACTCTGGAGCAGGAATCTGAGCAGACCCCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000021957.8
ENSMUST00000224249.2
ENSMUST00000225240.3
CDS CCA 72 bp GTGGGGCTGTTAGGGGGAGCAGTAAGGTCTGAGTGCTaGTGGTGCTCCGAGACAGGGAAAGCCTCACCAAGG +
Preference number: 6 (lower is better)
Translates to: VGLLGGAVRSEC*WCSETGKASPR
Trigger: CCTTGGTGAGGCTTTCCCTGTCTCGGAGCACCACCAGCACTCAGACCTTACTGCTCCCCCTAACAGCCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS CCA 72 bp GGGTCTGCTCAGATTCCTGCTCCAGAGTCCGTGCCTTaGCCCCACCTGGCCAATTCTGCCAGGAACTACCCT +
Preference number: 6 (lower is better)
Translates to: GSAQIPAPESVP*PHLANSARNYP
Trigger: AGGGTAGTTCCTGGCAGAATTGGCCAGGTGGGGCCAAGGCACGGACTCTGGAGCAGGAATCTGAGCAGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021957.8
ENSMUST00000224249.2
ENSMUST00000225240.3
CDS CAA 72 bp CCCTTGCTGGGCTGCTTGGGGCTAGATACCTGGCTCTaGGCACCGGAAGCCTCTAGATTGGCTGGTGACCAG +
Preference number: 6 (lower is better)
Translates to: PLLGCLGLDTWL*APEASRLAGDQ
Trigger: CTGGTCACCAGCCAATCTAGAGGCTTCCGGTGCCAAGAGCCAGGTATCTAGCCCCAAGCAGCCCAGCAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021957.8
ENSMUST00000224249.2
ENSMUST00000225240.3
CDS CAA 90 bp GCTGGACCAGGGGTCTGCTCAGATTCCTGCTCCAGAGTCCGTGCCTaGGCCCCACCTGGCCAATTCTGCCAGGAACTACCCTTCTTGTCA +
Preference number: 6 (lower is better)
Translates to: AGPGVCSDSCSRVRA*APPGQFCQELPFLS
Trigger: TGACAAGAAGGGTAGTTCCTGGCAGAATTGGCCAGGTGGGGCCAAGGCACGGACTCTGGAGCAGGAATCTGAGCAGACCCCTGGTCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000021957.8
ENSMUST00000224249.2
ENSMUST00000225240.3
CDS CAA 90 bp CGGCAGCTCTGGCAGACCCACAGAGGCATCTCGCCTAGGAGATTCTaGACGAGCTTTGGCATGAAGTCAGGGGGCAGCTTCTCACCCTGC +
Preference number: 6 (lower is better)
Translates to: RQLWQTHRGISPRRF*TSFGMKSGGSFSPC
Trigger: GCAGGGTGAGAAGCTGCCCCCTGACTTCATGCCAAAGCTCGTCAAGAATCTCCTAGGCGAGATGCCTCTGTGGGTCTGCCAGAGCTGCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000225240.3
CDS CCA 72 bp GGGCTGTTAGGGGGAGCAGTAAGGTCTGAGTGCTGGTaGTGCTCCGAGACAGGGAAAGCCTCACCAAGGATG +
Preference number: 6 (lower is better)
Translates to: GLLGGAVRSECW*CSETGKASPRM
Trigger: CATCCTTGGTGAGGCTTTCCCTGTCTCGGAGCACCACCAGCACTCAGACCTTACTGCTCCCCCTAACAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS CCA 72 bp TCTGAGCCCTTGCTGGGCTGCTTGGGGCTAGATACCTaGCTCTTGGCACCGGAAGCCTCTAGATTGGCTGGT +
Preference number: 6 (lower is better)
Translates to: SEPLLGCLGLDT*LLAPEASRLAG
Trigger: ACCAGCCAATCTAGAGGCTTCCGGTGCCAAGAGCCAGGTATCTAGCCCCAAGCAGCCCAGCAAGGGCTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021957.8
ENSMUST00000224249.2
ENSMUST00000225240.3
CDS CAA 72 bp GCCCTGGCGCTGTTGGGGACTTTGGGCTCCGTGCTGTaGATGAATTCCAGCAGCTCATCCACATCTCGGTGG +
Preference number: 6 (lower is better)
Translates to: ALALLGTLGSVL*MNSSSSSTSRW
Trigger: CCACCGAGATGTGGATGAGCTGCTGGAATTCATCAACAGCACGGAGCCCAAAGTCCCCAACAGCGCCAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021957.8
CDS CAA 90 bp TTCTTTTTCAGCTTGTGCCGGGCCCGCTTGGCAGCCCTGGCGCTGTaGGGGACTTTGGGCTCCGTGCTGTTGATGAATTCCAGCAGCTCA +
Preference number: 6 (lower is better)
Translates to: FFFSLCRARLAALAL*GTLGSVLLMNSSSS
Trigger: TGAGCTGCTGGAATTCATCAACAGCACGGAGCCCAAAGTCCCCAACAGCGCCAGGGCTGCCAAGCGGGCCCGGCACAAGCTGAAAAAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000021957.8
CDS CAA 90 bp GTGGGTGAGGGTCTCTCCTTTCTGCCCAAGGTGGGACTGGTTCACTaGGGGCTTGTAACGTGTGGCTCTGAGGGGAACCCAAGGTCAAAG +
Preference number: 6 (lower is better)
Translates to: VGEGLSFLPKVGLVH*GLVTCGSEGNPRSK
Trigger: CTTTGACCTTGGGTTCCCCTCAGAGCCACACGTTACAAGCCCCAAGTGAACCAGTCCCACCTTGGGCAGAAAGGAGAGACCCTCACCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000021957.8
ENSMUST00000224249.2
ENSMUST00000225240.3
CDS TCA 72 bp GATGTCAGGCCGTTTCTGAGAGGAGCCACTGAGGTCTaGAGGAGTGAGGGTCTGAGCTTCCACAGTCCCCTC +
Preference number: 6 (lower is better)
Translates to: DVRPFLRGATEV*RSEGLSFHSPL
Trigger: GAGGGGACTGTGGAAGCTCAGACCCTCACTCCTTCAGACCTCAGTGGCTCCTCTCAGAAACGGCCTGACATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS TCA 72 bp GGGCAGCTTCTCACCCTGCAACACCAGTCCATTTTGTaGAGGGCCTTCTTCCCAGCCTTTGCGCTCACGGTG +
Preference number: 6 (lower is better)
Translates to: GQLLTLQHQSIL*RAFFPAFALTV
Trigger: CACCGTGAGCGCAAAGGCTGGGAAGAAGGCCCTTCACAAAATGGACTGGTGTTGCAGGGTGAGAAGCTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225240.3
CDS GCA 72 bp CTGTTAGGGGGAGCAGTAAGGTCTGAGTGCTGGTGGTaGTCCGAGACAGGGAAAGCCTCACCAAGGATGGCA +
Preference number: 6 (lower is better)
Translates to: LLGGAVRSECWW*SETGKASPRMA
Trigger: TGCCATCCTTGGTGAGGCTTTCCCTGTCTCGGAGCACCACCAGCACTCAGACCTTACTGCTCCCCCTAACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS CAA 72 bp CTAGATACCTGGCTCTTGGCACCGGAAGCCTCTAGATaGGCTGGTGACCAGGGGGCTGGACTTGCCAAAGTC +
Preference number: 6 (lower is better)
Translates to: LDTWLLAPEASR*AGDQGAGLAKV
Trigger: GACTTTGGCAAGTCCAGCCCCCTGGTCACCAGCCAATCTAGAGGCTTCCGGTGCCAAGAGCCAGGTATCTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000021957.8
ENSMUST00000224249.2
ENSMUST00000225240.3
CDS TCA 72 bp TTTCCTCAGAGCTTGGGTTGCCTGGCTTGGGTGTCTTaGCCCAGATCACCCTGGACAGGTTGGGCACAGTGT +
Preference number: 6 (lower is better)
Translates to: FPQSLGCLAWVS*PRSPWTGWAQC
Trigger: ACACTGTGCCCAACCTGTCCAGGGTGATCTGGGTCAAGACACCCAAGCCAGGCAACCCAAGCTCTGAGGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000021957.8
ENSMUST00000224249.2
ENSMUST00000225240.3
CDS TCA 72 bp TGTGAAGGGCCTTCTTCCCAGCCTTTGCGCTCACGGTaGCACAGCAGGCAACAAGTCTGTACAGACTGGCTG +
Preference number: 6 (lower is better)
Translates to: CEGPSSQPLRSR*HSRQQVCTDWL
Trigger: CAGCCAGTCTGTACAGACTTGTTGCCTGCTGTGTCACCGTGAGCGCAAAGGCTGGGAAGAAGGCCCTTCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225240.3
CDS GCA 72 bp GGCCTTGGCTCCTGGCTTCCAGAAACACGATTCACCTaGTTCAGAGCTTCTGTGGCCAACCGAGCCTTCTCT +
Preference number: 6 (lower is better)
Translates to: GLGSWLPETRFT*FRASVANRAFS
Trigger: AGAGAAGGCTCGGTTGGCCACAGAAGCTCTGAAGCAGGTGAATCGTGTTTCTGGAAGCCAGGAGCCAAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS GCA 72 bp GCACAGAGGGAGTCCTTGACAGTGCTCTTGATCTCCTaGAAGCGGCTGCTCAAGAAGCTATTGACGCGGTCC +
Preference number: 6 (lower is better)
Translates to: AQRESLTVLLIS*KRLLKKLLTRS
Trigger: GGACCGCGTCAATAGCTTCTTGAGCAGCCGCTTGCAGGAGATCAAGAGCACTGTCAAGGACTCCCTCTGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS CCA 72 bp GCCAATTCTGCCAGGAACTACCCTTCTTGTCAGTTTTaGGGCTGTCAGCCTGAATTGGTCCTGGCCGGCTCC +
Preference number: 6 (lower is better)
Translates to: ANSARNYPSCQF*GCQPELVLAGS
Trigger: GGAGCCGGCCAGGACCAATTCAGGCTGACAGCCCCAAAACTGACAAGAAGGGTAGTTCCTGGCAGAATTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021957.8
ENSMUST00000224249.2
ENSMUST00000225240.3
CDS CAA 72 bp CTCTTGATCTCCTGCAAGCGGCTGCTCAAGAAGCTATaGACGCGGTCCAGTTCCTGGTCAGGCCACTCTAGG +
Preference number: 6 (lower is better)
Translates to: LLISCKRLLKKL*TRSSSWSGHSR
Trigger: CCTAGAGTGGCCTGACCAGGAACTGGACCGCGTCAATAGCTTCTTGAGCAGCCGCTTGCAGGAGATCAAGAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS CAA 72 bp AGCTCACACATACTCAGGCTGGCACAGAGGGAGTCCTaGACAGTGCTCTTGATCTCCTGCAAGCGGCTGCTC +
Preference number: 6 (lower is better)
Translates to: SSHILRLAQRES*TVLLISCKRLL
Trigger: GAGCAGCCGCTTGCAGGAGATCAAGAGCACTGTCAAGGACTCCCTCTGTGCCAGCCTGAGTATGTGTGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS CAA 72 bp TGGCAGACCCACAGAGGCATCTCGCCTAGGAGATTCTaGACGAGCTTTGGCATGAAGTCAGGGGGCAGCTTC +
Preference number: 6 (lower is better)
Translates to: WQTHRGISPRRF*TSFGMKSGGSF
Trigger: GAAGCTGCCCCCTGACTTCATGCCAAAGCTCGTCAAGAATCTCCTAGGCGAGATGCCTCTGTGGGTCTGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000225240.3
CDS CAA 90 bp TCACACATACTCAGGCTGGCACAGAGGGAGTCCTTGACAGTGCTCTaGATCTCCTGCAAGCGGCTGCTCAAGAAGCTATTGACGCGGTCC +
Preference number: 6 (lower is better)
Translates to: SHILRLAQRESLTVL*ISCKRLLKKLLTRS
Trigger: GGACCGCGTCAATAGCTTCTTGAGCAGCCGCTTGCAGGAGATCAAGAGCACTGTCAAGGACTCCCTCTGTGCCAGCCTGAGTATGTGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS CAA 90 bp TCCACGCTGAGCTCACACATACTCAGGCTGGCACAGAGGGAGTCCTaGACAGTGCTCTTGATCTCCTGCAAGCGGCTGCTCAAGAAGCTA +
Preference number: 6 (lower is better)
Translates to: STLSSHILRLAQRES*TVLLISCKRLLKKL
Trigger: TAGCTTCTTGAGCAGCCGCTTGCAGGAGATCAAGAGCACTGTCAAGGACTCCCTCTGTGCCAGCCTGAGTATGTGTGAGCTCAGCGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS CAA 90 bp GGGTTGCCTGGCTTGGGTGTCTTGACCCAGATCACCCTGGACAGGTaGGGCACAGTGTTGAGTCTTCTCACAAGCCCATTCTCAGGGATA +
Preference number: 6 (lower is better)
Translates to: GLPGLGVLTQITLDR*GTVLSLLTSPFSGI
Trigger: TATCCCTGAGAATGGGCTTGTGAGAAGACTCAACACTGTGCCCAACCTGTCCAGGGTGATCTGGGTCAAGACACCCAAGCCAGGCAACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000021957.8
ENSMUST00000224249.2
ENSMUST00000225240.3
CDS CAA 90 bp CTGGGAACTTCCTTTGAACTTTCCTCAGAGCTTGGGTTGCCTGGCTaGGGTGTCTTGACCCAGATCACCCTGGACAGGTTGGGCACAGTG +
Preference number: 6 (lower is better)
Translates to: LGTSFELSSELGLPG*GVLTQITLDRLGTV
Trigger: CACTGTGCCCAACCTGTCCAGGGTGATCTGGGTCAAGACACCCAAGCCAGGCAACCCAAGCTCTGAGGAAAGTTCAAAGGAAGTTCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000021957.8
ENSMUST00000224249.2
ENSMUST00000225240.3
CDS CAA 72 bp GGCTTGGGTGTCTTGACCCAGATCACCCTGGACAGGTaGGGCACAGTGTTGAGTCTTCTCACAAGCCCATTC +
Preference number: 6 (lower is better)
Translates to: GLGVLTQITLDR*GTVLSLLTSPF
Trigger: GAATGGGCTTGTGAGAAGACTCAACACTGTGCCCAACCTGTCCAGGGTGATCTGGGTCAAGACACCCAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000021957.8
ENSMUST00000224249.2
ENSMUST00000225240.3
CDS GCA 72 bp CCAGTCCATTTTGTGAAGGGCCTTCTTCCCAGCCTTTaGGCTCACGGTGACACAGCAGGCAACAAGTCTGTA +
Preference number: 6 (lower is better)
Translates to: PVHFVKGLLPSL*AHGDTAGNKSV
Trigger: TACAGACTTGTTGCCTGCTGTGTCACCGTGAGCGCAAAGGCTGGGAAGAAGGCCCTTCACAAAATGGACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225240.3
CDS GCA 72 bp AGCTTTGGCATGAAGTCAGGGGGCAGCTTCTCACCCTaGAACACCAGTCCATTTTGTGAAGGGCCTTCTTCC +
Preference number: 6 (lower is better)
Translates to: SFGMKSGGSFSP*NTSPFCEGPSS
Trigger: GGAAGAAGGCCCTTCACAAAATGGACTGGTGTTGCAGGGTGAGAAGCTGCCCCCTGACTTCATGCCAAAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000225240.3
CDS CAA 72 bp CTGGGAACTTCCTTTGAACTTTCCTCAGAGCTTGGGTaGCCTGGCTTGGGTGTCTTGACCCAGATCACCCTG +
Preference number: 6 (lower is better)
Translates to: LGTSFELSSELG*PGLGVLTQITL
Trigger: CAGGGTGATCTGGGTCAAGACACCCAAGCCAGGCAACCCAAGCTCTGAGGAAAGTTCAAAGGAAGTTCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000021957.8
ENSMUST00000224249.2
ENSMUST00000225240.3
CDS CAA 90 bp TGGCACCGGAAGCCTCTAGATTGGCTGGTGACCAGGGGGCTGGACTaGCCAAAGTCTTCTTTGCTTGACTTCCCTGTCTCTTGCTCTTTT +
Preference number: 6 (lower is better)
Translates to: WHRKPLDWLVTRGLD*PKSSLLDFPVSCSF
Trigger: AAAAGAGCAAGAGACAGGGAAGTCAAGCAAAGAAGACTTTGGCAAGTCCAGCCCCCTGGTCACCAGCCAATCTAGAGGCTTCCGGTGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000021957.8
ENSMUST00000224249.2
ENSMUST00000225240.3
CDS CAA 72 bp TTGACCCAGATCACCCTGGACAGGTTGGGCACAGTGTaGAGTCTTCTCACAAGCCCATTCTCAGGGATACCA +
Preference number: 6 (lower is better)
Translates to: LTQITLDRLGTV*SLLTSPFSGIP
Trigger: TGGTATCCCTGAGAATGGGCTTGTGAGAAGACTCAACACTGTGCCCAACCTGTCCAGGGTGATCTGGGTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000021957.8
ENSMUST00000224249.2
ENSMUST00000225240.3
CDS CAA 72 bp AAGCCTCTAGATTGGCTGGTGACCAGGGGGCTGGACTaGCCAAAGTCTTCTTTGCTTGACTTCCCTGTCTCT +
Preference number: 6 (lower is better)
Translates to: KPLDWLVTRGLD*PKSSLLDFPVS
Trigger: AGAGACAGGGAAGTCAAGCAAAGAAGACTTTGGCAAGTCCAGCCCCCTGGTCACCAGCCAATCTAGAGGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000021957.8
ENSMUST00000224249.2
ENSMUST00000225240.3
CDS CAA 90 bp TGTTTGCAACTGGGAACTTCCTTTGAACTTTCCTCAGAGCTTGGGTaGCCTGGCTTGGGTGTCTTGACCCAGATCACCCTGGACAGGTTG +
Preference number: 6 (lower is better)
Translates to: CLQLGTSFELSSELG*PGLGVLTQITLDRL
Trigger: CAACCTGTCCAGGGTGATCTGGGTCAAGACACCCAAGCCAGGCAACCCAAGCTCTGAGGAAAGTTCAAAGGAAGTTCCCAGTTGCAAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000021957.8
ENSMUST00000224249.2
ENSMUST00000225240.3
CDS GCA 72 bp AGGATGAATGAGAGTCACCCCCACAAGACTGTGATTTaGAGGATGTGTGTGACAAGGAGATCGCCACTGCAT +
Preference number: 6 (lower is better)
Translates to: RMNESHPHKTVI*RMCVTRRSPLH
Trigger: ATGCAGTGGCGATCTCCTTGTCACACACATCCTGCAAATCACAGTCTTGTGGGGGTGACTCTCATTCATCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3
CDS CCA 72 bp TTCCAGAAACACGATTCACCTGCTTCAGAGCTTCTGTaGCCAACCGAGCCTTCTCTTTTTCCTTCTTTTTCA +
Preference number: 6 (lower is better)
Translates to: FQKHDSPASELL*PTEPSLFPSFS
Trigger: TGAAAAAGAAGGAAAAAGAGAAGGCTCGGTTGGCCACAGAAGCTCTGAAGCAGGTGAATCGTGTTTCTGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000021957.8
CDS CAA 72 bp GAAGTTGGTCCAGTTCACAGCAACTTTCTGACGAGTTaGCTTTGCAGAATCCAAACAGAACCTCTTGAAGTA +
Preference number: 6 (lower is better)
Translates to: EVGPVHSNFLTS*LCRIQTEPLEV
Trigger: TACTTCAAGAGGTTCTGTTTGGATTCTGCAAAGCAAACTCGTCAGAAAGTTGCTGTGAACTGGACCAACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021957.8
ENSMUST00000225240.3