Pregenerated sensors for FAM189A2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000071604Ensembl transcript IDs: ENSMUST00000096164.6
Found 132 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAGGCTGGAAGACTGGAGTCACATGGTGTTAACCATCATGTCTCCTaGCAATTCCTCTCACTGAGCAGCCAGAGGCGGCAGGCTGCTATA | + |
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Preference number: 1 (lower is better) Translates to: EAGRLESHGVNHHVS*QFLSLSSQRRQAAI Trigger: TATAGCAGCCTGCCGCCTCTGGCTGCTCAGTGAGAGGAATTGGCAGGAGACATGATGGTTAACACCATGTGACTCCAGTCTTCCAGCCTC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| 3UTR-3UTR TCA 90 bp | CCGCTTAGCTGGTCTGCTGCTTTTCCTAAAGAGGAAGGGATTGAGGGTAACCTAGCCAATTCCTCTCACTaGGCAGCCAGAGGCGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: PLSWSAAFPKEEGIEGNLANSSH*AARGGR Trigger: CCTGCCGCCTCTGGCTGCTCAGTGAGAGGAATTGGC...TAGGTTACCCTCAATCCCTTCCTCTTTAGGAAAAGCAGCAGACCAGCTAAGCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| 3UTR-3UTR TCA 90 bp | TGGTCTGCTGCTTTTCCTAAAGAGGAAGGGATTGAGGGTAACCTAAAGGAGGCTAAGAGCCATGAGGGGTaGGGCAGGCAAAGGCTAGGG | + |
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Preference number: 2 (lower is better) Translates to: WSAAFPKEEGIEGNLKEAKSHEG*GRQRLG Trigger: CCCTAGCCTTTGCCTGCCTCACCCCTCATGGCTCTT...AGCCTCCTTTAGGTTACCCTCAATCCCTTCCTCTTTAGGAAAAGCAGCAGACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| 3UTR-3UTR GCA 90 bp | TGGTCTGCTGCTTTTCCTAAAGAGGAAGGGATTGAGGGTAACCTAAAGGAGGCTAAGAACAGGAATAAGTaGCCACCCCAGGAACCCGGT | + |
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Preference number: 2 (lower is better) Translates to: WSAAFPKEEGIEGNLKEAKNRNK*PPQEPG Trigger: ACCGGGTTCCTGGGGTGGGCACTTATTCCTGTTCTT...AGCCTCCTTTAGGTTACCCTCAATCCCTTCCTCTTTAGGAAAAGCAGCAGACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| 3UTR-3UTR GCA 90 bp | TTTCCAACGCCAGCGCTTTATTCTCTGTTCTGTCTTCTAGTTTGCAAGCATGAAAGGGAGCCTGCTTTCTaGTCACCCAGTGTGCACCCC | + |
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Preference number: 2 (lower is better) Translates to: FPTPALYSLFCLLVCKHEREPAF*SPSVHP Trigger: GGGGTGCACACTGGGTGAGCAGAAAGCAGGCTCCCT...TTCATGCTTGCAAACTAGAAGACAGAACAGAGAATAAAGCGCTGGCGTTGGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| 3UTR-3UTR CCA 90 bp | TGGTCTGCTGCTTTTCCTAAAGAGGAAGGGATTGAGGGTAACCTAAAGGAGGCTCAGGAACACACAGACTaGAAGGGCCAGGAAGAACGT | + |
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Preference number: 2 (lower is better) Translates to: WSAAFPKEEGIEGNLKEAQEHTD*KGQEER Trigger: ACGTTCTTCCTGGCCCTTCCAGTCTGTGTGTTCCTG...AGCCTCCTTTAGGTTACCCTCAATCCCTTCCTCTTTAGGAAAAGCAGCAGACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| 3UTR-3UTR CAA 90 bp | TCTGCTCACCCAGTGTGCACCCCTTGGGGATACTGTGAGACCCAGCAGACAAAGACCCCAGGAACCCGGTaGAGGGGTTCCCAGTGGGGG | + |
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Preference number: 3 (lower is better) Translates to: SAHPVCTPWGYCETQQTKTPGTR*RGSQWG Trigger: CCCCCACTGGGAACCCCTCAACCGGGTTCCTGGGGT...CTTTGTCTGCTGGGTCTCACAGTATCCCCAAGGGGTGCACACTGGGTGAGCAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| 3UTR CCA 72 bp | GGGAGCCTGCTTTCTGCTCACCCAGTGTGCACCCCTTaGGGATACTGTGAGACCCAGCAGACAAAGGAGCCC | + |
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Preference number: 3 (lower is better) Translates to: GSLLSAHPVCTP*GYCETQQTKEP Trigger: GGGCTCCTTTGTCTGCTGGGTCTCACAGTATCCCCAAGGGGTGCACACTGGGTGAGCAGAAAGCAGGCTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| 3UTR GCA 72 bp | AGACTGGAGTCACATGGTGTTAACCATCATGTCTCCTaGCAATTCCTCTCACTGAGCAGCCAGAGGCGGCAG | + |
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Preference number: 3 (lower is better) Translates to: RLESHGVNHHVS*QFLSLSSQRRQ Trigger: CTGCCGCCTCTGGCTGCTCAGTGAGAGGAATTGGCAGGAGACATGATGGTTAACACCATGTGACTCCAGTCT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| 3UTR-3UTR CAA 90 bp | TTTCCAACGCCAGCGCTTTATTCTCTGTTCTGTCTTCTAGTTTGCAAGCATGAAAGCAAGGGAATGAACTaGGCAACAACAAGAGCCATG | + |
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Preference number: 3 (lower is better) Translates to: FPTPALYSLFCLLVCKHESKGMN*ATTRAM Trigger: CATGGCTCTTGTTGTTGCCAAGTTCATTCCCTTGCT...TTCATGCTTGCAAACTAGAAGACAGAACAGAGAATAAAGCGCTGGCGTTGGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS-3UTR TCA 90 bp | GGATACTGTGAGACCCAGCAGACAAAGGAGCCCTCCCTGCCTTCTTCTCCAACCACAGCGCCCCGAAGCTaGGCGCCACCATGCAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: GYCETQQTKEPSLPSSPTTAPRS*APPCSS Trigger: GCTGCTGCATGGTGGCGCTCAGCTTCGGGGCGCTGT...GGTTGGAGAAGAAGGCAGGGAGGGCTCCTTTGTCTGCTGGGTCTCACAGTATCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS-3UTR CCA 90 bp | GAGCCCTCCCTGCCTTCTTCTCCAACCAGGAACACACAGACTGGAAGGGCCAGGCTCCAGCTCAACTCCTaGGCCTGGGATGTGCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: EPSLPSSPTRNTQTGRARLQLNS*AWDVLG Trigger: GCCCAGCACATCCCAGGCCCAGGAGTTGAGCTGGAG...CCTGGCCCTTCCAGTCTGTGTGTTCCTGGTTGGAGAAGAAGGCAGGGAGGGCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS-3UTR GCA 90 bp | CCAACCAGGAACACACAGACTGGAAGGGCCAGGAAGAACGTACTTCACCCGAGTTCACCTGCGGCGAGCTaGTCAGCGACAGCGCCCCGA | + |
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Preference number: 4 (lower is better) Translates to: PTRNTQTGRARKNVLHPSSPAAS*SATAPR Trigger: TCGGGGCGCTGTCGCTGAGCAGCTCGCCGCAGGTGA...ACTCGGGTGAAGTACGTTCTTCCTGGCCCTTCCAGTCTGTGTGTTCCTGGTTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS-3UTR CCA 90 bp | CAATTCCTCTCACTGAGCAGCCAGAGGCGGCAGGCTGCTATAAATAGCCCGGCAGGGCCTGGGATGTGCTaGGCTGTGACGGGGCCATTA | + |
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Preference number: 4 (lower is better) Translates to: QFLSLSSQRRQAAINSPAGPGMC*AVTGPL Trigger: TAATGGCCCCGTCACAGCCCAGCACATCCCAGGCCC...TGCCGGGCTATTTATAGCAGCCTGCCGCCTCTGGCTGCTCAGTGAGAGGAATTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS-3UTR TCA 90 bp | GAGCCCTCCCTGCCTTCTTCTCCAACCAGGAACACACAGACTGGAAGGGCCAGGCACAGGGTCGCTCTTTaGTCTTGTCCTCAGAAGGGG | + |
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Preference number: 4 (lower is better) Translates to: EPSLPSSPTRNTQTGRARHRVAL*SCPQKG Trigger: CCCCTTCTGAGGACAAGATCAAAGAGCGACCCTGTG...CCTGGCCCTTCCAGTCTGTGTGTTCCTGGTTGGAGAAGAAGGCAGGGAGGGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS-3UTR TCA 90 bp | GAGCCCTCCCTGCCTTCTTCTCCAACCAGGAACACACAGACTGGAAGGGCCAGGCTCTCCTCCGAATGGTaGAGCACAGGGTCGCTCTTT | + |
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Preference number: 4 (lower is better) Translates to: EPSLPSSPTRNTQTGRARLSSEW*STGSLF Trigger: AAAGAGCGACCCTGTGCTTCACCATTCGGAGGAGAG...CCTGGCCCTTCCAGTCTGTGTGTTCCTGGTTGGAGAAGAAGGCAGGGAGGGCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS-3UTR GCA 90 bp | GGGGATACTGTGAGACCCAGCAGACAAAGGAGCCCTCCCTGCCTTCTTCTCCAACACGAGTTCTTCACCTaGGGCGAGCTGCTCAGCGAC | + |
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Preference number: 4 (lower is better) Translates to: GDTVRPSRQRSPPCLLLQHEFFT*GELLSD Trigger: GTCGCTGAGCAGCTCGCCGCAGGTGAAGAACTCGTG...TTGGAGAAGAAGGCAGGGAGGGCTCCTTTGTCTGCTGGGTCTCACAGTATCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS-3UTR GCA 90 bp | GAGCCCTCCCTGCCTTCTTCTCCAACCAGGAACACACAGACTGGAAGGGCCAGGCCTTTCTGTCTGCGTTaGAGCTTCGCAGCTGAGCAC | + |
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Preference number: 4 (lower is better) Translates to: EPSLPSSPTRNTQTGRARPFCLR*SFAAEH Trigger: GTGCTCAGCTGCGAAGCTGCAACGCAGACAGAAAGG...CCTGGCCCTTCCAGTCTGTGTGTTCCTGGTTGGAGAAGAAGGCAGGGAGGGCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS-3UTR CCA 90 bp | GGATACTGTGAGACCCAGCAGACAAAGGAGCCCTCCCTGCCTTCTTCTCCAACCCTCAACTCCTGGGCCTaGGATGTGCTGGGCTGTGAC | + |
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Preference number: 4 (lower is better) Translates to: GYCETQQTKEPSLPSSPTLNSWA*DVLGCD Trigger: GTCACAGCCCAGCACATCCCAGGCCCAGGAGTTGAG...GGTTGGAGAAGAAGGCAGGGAGGGCTCCTTTGTCTGCTGGGTCTCACAGTATCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS-3UTR TCA 90 bp | CCAACCAGGAACACACAGACTGGAAGGGCCAGGAAGAACGTACTTCACCCGAGTGGATGTGCTGGGCTGTaGCGGGGCCATTATCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: PTRNTQTGRARKNVLHPSGCAGL*RGHYLL Trigger: GAGCAGATAATGGCCCCGTCACAGCCCAGCACATCC...ACTCGGGTGAAGTACGTTCTTCCTGGCCCTTCCAGTCTGTGTGTTCCTGGTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS-3UTR CCA 90 bp | GGATACTGTGAGACCCAGCAGACAAAGGAGCCCTCCCTGCCTTCTTCTCCAACCGGAGCCAGCCCAGAATaGGCACGAGTTCTTCACCTG | + |
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Preference number: 4 (lower is better) Translates to: GYCETQQTKEPSLPSSPTGASPE*ARVLHL Trigger: CAGGTGAAGAACTCGTGCCCATTCTGGGCTGGCTCC...GGTTGGAGAAGAAGGCAGGGAGGGCTCCTTTGTCTGCTGGGTCTCACAGTATCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS-3UTR CCA 90 bp | TCTGCTCACCCAGTGTGCACCCCTTGGGGATACTGTGAGACCCAGCAGACAAAGCACACCTGGGCACGCTaGACACAAACTGGGCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: SAHPVCTPWGYCETQQTKHTWAR*TQTGLL Trigger: AAGGAGCCCAGTTTGTGTCCAGCGTGCCCAGGTGTG...CTTTGTCTGCTGGGTCTCACAGTATCCCCAAGGGGTGCACACTGGGTGAGCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS-3UTR GCA 90 bp | TGGTCTGCTGCTTTTCCTAAAGAGGAAGGGATTGAGGGTAACCTAAAGGAGGCTCCTGGGCCTGGGATGTaGTGGGCTGTGACGGGGCCA | + |
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Preference number: 4 (lower is better) Translates to: WSAAFPKEEGIEGNLKEAPGPGM*WAVTGP Trigger: TGGCCCCGTCACAGCCCAGCACATCCCAGGCCCAGG...AGCCTCCTTTAGGTTACCCTCAATCCCTTCCTCTTTAGGAAAAGCAGCAGACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS-3UTR GCA 90 bp | GAGCCCTCCCTGCCTTCTTCTCCAACCAGGAACACACAGACTGGAAGGGCCAGGCTGTCAGAGAGAAGGTaGTTAGATCTCCACAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: EPSLPSSPTRNTQTGRARLSERR*LDLHSC Trigger: GCAGCTGTGGAGATCTAAGCACCTTCTCTCTGACAG...CCTGGCCCTTCCAGTCTGTGTGTTCCTGGTTGGAGAAGAAGGCAGGGAGGGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS-3UTR CCA 90 bp | GAGCCCTCCCTGCCTTCTTCTCCAACCAGGAACACACAGACTGGAAGGGCCAGGGGTCCTTCTGGCATTTaGAATGAAGACTCCTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: EPSLPSSPTRNTQTGRARGPSGI*NEDSCS Trigger: GGAGCAGGAGTCTTCATTCCAAATGCCAGAAGGACC...CCTGGCCCTTCCAGTCTGTGTGTTCCTGGTTGGAGAAGAAGGCAGGGAGGGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS-3UTR TCA 90 bp | GGGGATACTGTGAGACCCAGCAGACAAAGGAGCCCTCCCTGCCTTCTTCTCCAATATGGGGCAGTGGGATaGCATCAGAACCAACCATCC | + |
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Preference number: 4 (lower is better) Translates to: GDTVRPSRQRSPPCLLLQYGAVG*HQNQPS Trigger: GGATGGTTGGTTCTGATGTCATCCCACTGCCCCATA...TTGGAGAAGAAGGCAGGGAGGGCTCCTTTGTCTGCTGGGTCTCACAGTATCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS-3UTR GCA 90 bp | CCAACCAGGAACACACAGACTGGAAGGGCCAGGAAGAACGTACTTCACCCGAGTGAATGTCCGGAGTCATaGTGCAGGAGGACTGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: PTRNTQTGRARKNVLHPSECPES*CRRTAP Trigger: TGGAGCAGTCCTCCTGCAGCATGACTCCGGACATTC...ACTCGGGTGAAGTACGTTCTTCCTGGCCCTTCCAGTCTGTGTGTTCCTGGTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS-3UTR CCA 90 bp | GAGCCCTCCCTGCCTTCTTCTCCAACCAGGAACACACAGACTGGAAGGGCCAGGTCACCAGCAGTATCATaGGCCTTTTCCAAGTCGTCA | + |
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Preference number: 4 (lower is better) Translates to: EPSLPSSPTRNTQTGRARSPAVS*AFSKSS Trigger: TGACGACTTGGAAAAGGCCCATGATACTGCTGGTGA...CCTGGCCCTTCCAGTCTGTGTGTTCCTGGTTGGAGAAGAAGGCAGGGAGGGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS-3UTR CCA 90 bp | GGGGATACTGTGAGACCCAGCAGACAAAGGAGCCCTCCCTGCCTTCTTCTCCAAAGAAGGAGGAGGCACTaGTGGCACAAAGTCATCTGG | + |
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Preference number: 4 (lower is better) Translates to: GDTVRPSRQRSPPCLLLQRRRRH*WHKVIW Trigger: CCAGATGACTTTGTGCCACCAGTGCCTCCTCCTTCT...TTGGAGAAGAAGGCAGGGAGGGCTCCTTTGTCTGCTGGGTCTCACAGTATCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS-3UTR CCA 90 bp | TTTCTGCTCACCCAGTGTGCACCCCTTGGGGATACTGTGAGACCCAGCAGACAAACTGCTCCAGGAACCTaGCCACTAGCAGCTTCGTGT | + |
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Preference number: 4 (lower is better) Translates to: FLLTQCAPLGDTVRPSRQTAPGT*PLAASC Trigger: ACACGAAGCTGCTAGTGGCCAGGTTCCTGGAGCAGT...TTGTCTGCTGGGTCTCACAGTATCCCCAAGGGGTGCACACTGGGTGAGCAGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS-3UTR CCA 90 bp | GGGGATACTGTGAGACCCAGCAGACAAAGGAGCCCTCCCTGCCTTCTTCTCCAATACATGGCCTTCTGCTaGCAAAGATCTGGAGGTAGC | + |
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Preference number: 4 (lower is better) Translates to: GDTVRPSRQRSPPCLLLQYMAFC*QRSGGS Trigger: GCTACCTCCAGATCTTTGCCAGCAGAAGGCCATGTA...TTGGAGAAGAAGGCAGGGAGGGCTCCTTTGTCTGCTGGGTCTCACAGTATCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS-3UTR CCA 90 bp | GGGGATACTGTGAGACCCAGCAGACAAAGGAGCCCTCCCTGCCTTCTTCTCCAATGCTCCTGGTCAGTCTaGCTCACTACAGCTTCGTAT | + |
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Preference number: 4 (lower is better) Translates to: GDTVRPSRQRSPPCLLLQCSWSV*LTTASY Trigger: ATACGAAGCTGTAGTGAGCCAGACTGACCAGGAGCA...TTGGAGAAGAAGGCAGGGAGGGCTCCTTTGTCTGCTGGGTCTCACAGTATCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS-3UTR CCA 90 bp | CCGCTTAGCTGGTCTGCTGCTTTTCCTAAAGAGGAAGGGATTGAGGGTAACCTAACCAATAAGGCTGTGTaGCCGCTCAGCCTCCGCTCG | + |
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Preference number: 4 (lower is better) Translates to: PLSWSAAFPKEEGIEGNLTNKAV*PLSLRS Trigger: CGAGCGGAGGCTGAGCGGCCACACAGCCTTATTGGT...TAGGTTACCCTCAATCCCTTCCTCTTTAGGAAAAGCAGCAGACCAGCTAAGCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS-3UTR GCA 90 bp | CAATTCCTCTCACTGAGCAGCCAGAGGCGGCAGGCTGCTATAAATAGCCCGGCATTCTTCCACGTCCTCTaGAGACATCTGGGATTCATC | + |
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Preference number: 4 (lower is better) Translates to: QFLSLSSQRRQAAINSPAFFHVL*RHLGFI Trigger: GATGAATCCCAGATGTCTGCAGAGGACGTGGAAGAA...TGCCGGGCTATTTATAGCAGCCTGCCGCCTCTGGCTGCTCAGTGAGAGGAATTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS-3UTR GCA 90 bp | GGATACTGTGAGACCCAGCAGACAAAGGAGCCCTCCCTGCCTTCTTCTCCAACCATGGCTTCTTCCATGTaGCCCTCATCGGATTTCAGA | + |
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Preference number: 4 (lower is better) Translates to: GYCETQQTKEPSLPSSPTMASSM*PSSDFR Trigger: TCTGAAATCCGATGAGGGGCACATGGAAGAAGCCAT...GGTTGGAGAAGAAGGCAGGGAGGGCTCCTTTGTCTGCTGGGTCTCACAGTATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS-3UTR GCA 90 bp | TTTCCAACGCCAGCGCTTTATTCTCTGTTCTGTCTTCTAGTTTGCAAGCATGAACCACAGCTGCGCAGGTaGAGCAGGCCGGGCTGTCTC | + |
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Preference number: 4 (lower is better) Translates to: FPTPALYSLFCLLVCKHEPQLRR*SRPGCL Trigger: GAGACAGCCCGGCCTGCTGCACCTGCGCAGCTGTGG...TTCATGCTTGCAAACTAGAAGACAGAACAGAGAATAAAGCGCTGGCGTTGGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS-3UTR GCA 90 bp | TTTCCAACGCCAGCGCTTTATTCTCTGTTCTGTCTTCTAGTTTGCAAGCATGAATCAGCCTCCGCTCGCTaGTGGGGCCTCCTCTCGGCT | + |
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Preference number: 4 (lower is better) Translates to: FPTPALYSLFCLLVCKHESASAR*WGLLSA Trigger: AGCCGAGAGGAGGCCCCAGCAGCGAGCGGAGGCTGA...TTCATGCTTGCAAACTAGAAGACAGAACAGAGAATAAAGCGCTGGCGTTGGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS-3UTR CCA 90 bp | CCAACCAGGAACACACAGACTGGAAGGGCCAGGAAGAACGTACTTCACCCGAGTACAGCACTACAAGGCTaGACCGGGAAGAGTTTCAAG | + |
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Preference number: 4 (lower is better) Translates to: PTRNTQTGRARKNVLHPSTALQG*TGKSFK Trigger: CTTGAAACTCTTCCCGGTCCAGCCTTGTAGTGCTGT...ACTCGGGTGAAGTACGTTCTTCCTGGCCCTTCCAGTCTGTGTGTTCCTGGTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS-3UTR TCA 90 bp | CCAACCAGGAACACACAGACTGGAAGGGCCAGGAAGAACGTACTTCACCCGAGTACACTTCCACACCCTTaGTGCGTGCTCCATAGATAT | + |
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Preference number: 4 (lower is better) Translates to: PTRNTQTGRARKNVLHPSTLPHP*CVLHRY Trigger: ATATCTATGGAGCACGCATCAAGGGTGTGGAAGTGT...ACTCGGGTGAAGTACGTTCTTCCTGGCCCTTCCAGTCTGTGTGTTCCTGGTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS-3UTR GCA 90 bp | GGATACTGTGAGACCCAGCAGACAAAGGAGCCCTCCCTGCCTTCTTCTCCAACCAACAGAAGCAGATCTTaGCTTCACCTAAGTCCACCA | + |
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Preference number: 4 (lower is better) Translates to: GYCETQQTKEPSLPSSPTNRSRS*LHLSPP Trigger: TGGTGGACTTAGGTGAAGGCAAGATCTGCTTCTGTT...GGTTGGAGAAGAAGGCAGGGAGGGCTCCTTTGTCTGCTGGGTCTCACAGTATCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS-3UTR GCA 90 bp | ACAAAACACCGCTTAGCTGGTCTGCTGCTTTTCCTAAAGAGGAAGGGATTGAGGTGTCCGGAGTCATGCTaGAGGAGGACTGCTCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: TKHRLAGLLLFLKRKGLRCPESC*RRTAPG Trigger: TCCTGGAGCAGTCCTCCTGCAGCATGACTCCGGACA...CCTCAATCCCTTCCTCTTTAGGAAAAGCAGCAGACCAGCTAAGCGGTGTTTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS-3UTR CCA 90 bp | GGATACTGTGAGACCCAGCAGACAAAGGAGCCCTCCCTGCCTTCTTCTCCAACCATAGATATGGGGCAGTaGGATGACATCAGAACCAAC | + |
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Preference number: 4 (lower is better) Translates to: GYCETQQTKEPSLPSSPTIDMGQ*DDIRTN Trigger: GTTGGTTCTGATGTCATCCCACTGCCCCATATCTAT...GGTTGGAGAAGAAGGCAGGGAGGGCTCCTTTGTCTGCTGGGTCTCACAGTATCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS-3UTR TCA 90 bp | TGGTCTGCTGCTTTTCCTAAAGAGGAAGGGATTGAGGGTAACCTAAAGGAGGCTGGAAACTGGCACTCGTaGTGGCTTCTTCCATGTGCC | + |
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Preference number: 4 (lower is better) Translates to: WSAAFPKEEGIEGNLKEAGNWHS*WLLPCA Trigger: GGCACATGGAAGAAGCCATCACGAGTGCCAGTTTCC...AGCCTCCTTTAGGTTACCCTCAATCCCTTCCTCTTTAGGAAAAGCAGCAGACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS-3UTR CCA 90 bp | ACAAAACACCGCTTAGCTGGTCTGCTGCTTTTCCTAAAGAGGAAGGGATTGAGGCCACCAGATCACACCTaGGCACGCTGGACACAAACT | + |
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Preference number: 4 (lower is better) Translates to: TKHRLAGLLLFLKRKGLRPPDHT*ARWTQT Trigger: AGTTTGTGTCCAGCGTGCCCAGGTGTGATCTGGTGG...CCTCAATCCCTTCCTCTTTAGGAAAAGCAGCAGACCAGCTAAGCGGTGTTTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS-3UTR CCA 90 bp | CCAACCAGGAACACACAGACTGGAAGGGCCAGGAAGAACGTACTTCACCCGAGTTCCTCTGCAGACATCTaGGATTCATCAATACATGGC | + |
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Preference number: 4 (lower is better) Translates to: PTRNTQTGRARKNVLHPSSSADI*DSSIHG Trigger: GCCATGTATTGATGAATCCCAGATGTCTGCAGAGGA...ACTCGGGTGAAGTACGTTCTTCCTGGCCCTTCCAGTCTGTGTGTTCCTGGTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS-3UTR GCA 90 bp | GAGCCCTCCCTGCCTTCTTCTCCAACCAGGAACACACAGACTGGAAGGGCCAGGCATTTTCTTTGTCTGTaGATTTGGCTGGTTGAAATT | + |
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Preference number: 4 (lower is better) Translates to: EPSLPSSPTRNTQTGRARHFLCL*IWLVEI Trigger: AATTTCAACCAGCCAAATGCACAGACAAAGAAAATG...CCTGGCCCTTCCAGTCTGTGTGTTCCTGGTTGGAGAAGAAGGCAGGGAGGGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS-3UTR CCA 90 bp | TGGTCTGCTGCTTTTCCTAAAGAGGAAGGGATTGAGGGTAACCTAAAGGAGGCTCCACCAAACACACTGTaGTGGTCAAGGCGTTCAAGG | + |
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Preference number: 4 (lower is better) Translates to: WSAAFPKEEGIEGNLKEAPPNTL*WSRRSR Trigger: CCTTGAACGCCTTGACCACCACAGTGTGTTTGGTGG...AGCCTCCTTTAGGTTACCCTCAATCCCTTCCTCTTTAGGAAAAGCAGCAGACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS-3UTR CCA 90 bp | TTTCTGCTCACCCAGTGTGCACCCCTTGGGGATACTGTGAGACCCAGCAGACAAGGATTCATCAATACATaGCCTTCTGCTGGCAAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: FLLTQCAPLGDTVRPSRQGFINT*PSAGKD Trigger: ATCTTTGCCAGCAGAAGGCCATGTATTGATGAATCC...TTGTCTGCTGGGTCTCACAGTATCCCCAAGGGGTGCACACTGGGTGAGCAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS-3UTR CCA 90 bp | TTTCTGCTCACCCAGTGTGCACCCCTTGGGGATACTGTGAGACCCAGCAGACAATGCAGGAGTAAAATGTaGCAAAGTAAGAAGGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: FLLTQCAPLGDTVRPSRQCRSKM*QSKKEE Trigger: CTCCTCCTTCTTACTTTGCCACATTTTACTCCTGCA...TTGTCTGCTGGGTCTCACAGTATCCCCAAGGGGTGCACACTGGGTGAGCAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS-3UTR TCA 90 bp | TGGTCTGCTGCTTTTCCTAAAGAGGAAGGGATTGAGGGTAACCTAAAGGAGGCTCTTGACAGCCTAGGATaGAGCCTGCGAGATTTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: WSAAFPKEEGIEGNLKEALDSLG*SLRDLG Trigger: TCCTAAATCTCGCAGGCTTCATCCTAGGCTGTCAAG...AGCCTCCTTTAGGTTACCCTCAATCCCTTCCTCTTTAGGAAAAGCAGCAGACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS-3UTR GCA 90 bp | CCGCTTAGCTGGTCTGCTGCTTTTCCTAAAGAGGAAGGGATTGAGGGTAACCTATTCTTAAGCAGAAGGTaGACAGCACTACAAGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PLSWSAAFPKEEGIEGNLFLSRR*TALQGW Trigger: CCAGCCTTGTAGTGCTGTGCACCTTCTGCTTAAGAA...TAGGTTACCCTCAATCCCTTCCTCTTTAGGAAAAGCAGCAGACCAGCTAAGCGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS-3UTR TCA 90 bp | CCGCTTAGCTGGTCTGCTGCTTTTCCTAAAGAGGAAGGGATTGAGGGTAACCTATTCTCTACAAGTTCATaGATGTCCGGAGTCATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PLSWSAAFPKEEGIEGNLFSTSS*MSGVML Trigger: CAGCATGACTCCGGACATTCATGAACTTGTAGAGAA...TAGGTTACCCTCAATCCCTTCCTCTTTAGGAAAAGCAGCAGACCAGCTAAGCGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS-3UTR GCA 90 bp | TTTCCAACGCCAGCGCTTTATTCTCTGTTCTGTCTTCTAGTTTGCAAGCATGAAAGCCTCCTTTCTGTCTaGGTTGCAGCTTCGCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FPTPALYSLFCLLVCKHESLLSV*VAASQL Trigger: CAGCTGCGAAGCTGCAACGCAGACAGAAAGGAGGCT...TTCATGCTTGCAAACTAGAAGACAGAACAGAGAATAAAGCGCTGGCGTTGGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS-3UTR TCA 90 bp | TTTCCAACGCCAGCGCTTTATTCTCTGTTCTGTCTTCTAGTTTGCAAGCATGAAACAAACTGGGCTCCTTaGCAGCCTAGGATGAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: FPTPALYSLFCLLVCKHETNWAP*QPRMKP Trigger: AGGCTTCATCCTAGGCTGTCAAGGAGCCCAGTTTGT...TTCATGCTTGCAAACTAGAAGACAGAACAGAGAATAAAGCGCTGGCGTTGGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS-3UTR GCA 90 bp | TTTCCAACGCCAGCGCTTTATTCTCTGTTCTGTCTTCTAGTTTGCAAGCATGAACTTGAGTTATCTGCGTaGAAACTGGCTCTGCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: FPTPALYSLFCLLVCKHELELSA*KLALLG Trigger: GCCCAGCAGAGCCAGTTTGCACGCAGATAACTCAAG...TTCATGCTTGCAAACTAGAAGACAGAACAGAGAATAAAGCGCTGGCGTTGGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS-3UTR CCA 90 bp | TTTCCAACGCCAGCGCTTTATTCTCTGTTCTGTCTTCTAGTTTGCAAGCATGAAGAAGACTCCTGCTCCTaGTCAGTCTGGCTCACTACA | + |
|
Preference number: 4 (lower is better) Translates to: FPTPALYSLFCLLVCKHEEDSCS*SVWLTT Trigger: TGTAGTGAGCCAGACTGACCAGGAGCAGGAGTCTTC...TTCATGCTTGCAAACTAGAAGACAGAACAGAGAATAAAGCGCTGGCGTTGGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS-3UTR TCA 90 bp | TGGTCTGCTGCTTTTCCTAAAGAGGAAGGGATTGAGGGTAACCTAAAGGAGGCTGTGCATTTGGCTGGTTaGAATTCTTCACAACAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: WSAAFPKEEGIEGNLKEAVHLAG*NSSQQK Trigger: CTTCTGTTGTGAAGAATTTCAACCAGCCAAATGCAC...AGCCTCCTTTAGGTTACCCTCAATCCCTTCCTCTTTAGGAAAAGCAGCAGACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS-3UTR GCA 90 bp | TTTCCAACGCCAGCGCTTTATTCTCTGTTCTGTCTTCTAGTTTGCAAGCATGAACAATACATGGCCTTCTaGTGGCAAAGATCTGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: FPTPALYSLFCLLVCKHEQYMAF*WQRSGG Trigger: ACCTCCAGATCTTTGCCAGCAGAAGGCCATGTATTG...TTCATGCTTGCAAACTAGAAGACAGAACAGAGAATAAAGCGCTGGCGTTGGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS-3UTR TCA 90 bp | TTTCCAACGCCAGCGCTTTATTCTCTGTTCTGTCTTCTAGTTTGCAAGCATGAAAAGTCGTCAATCCAATaGTTCCAGAGAGTATCACCG | + |
|
Preference number: 4 (lower is better) Translates to: FPTPALYSLFCLLVCKHEKSSIQ*FQRVSP Trigger: CGGTGATACTCTCTGGAATCATTGGATTGACGACTT...TTCATGCTTGCAAACTAGAAGACAGAACAGAGAATAAAGCGCTGGCGTTGGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS TCA 90 bp | AGTTCTTCACCTGCGGCGAGCTGCTCAGCGACAGCGCCCCGAAGCTaGGCGCCACCATGCAGCAGCCCAGGATCAGCTGCAGGAGCCCGA | + |
|
Preference number: 5 (lower is better) Translates to: SSSPAASCSATAPRS*APPCSSPGSAAGAR Trigger: TCGGGCTCCTGCAGCTGATCCTGGGCTGCTGCATGGTGGCGCTCAGCTTCGGGGCGCTGTCGCTGAGCAGCTCGCCGCAGGTGAAGAACT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS CCA 90 bp | ATGACACCAATAAGGCTGTGTGGCCGCTCAGCCTCCGCTCGCTGCTaGGGCCTCCTCTCGGCTCTCGGCCTTGCTGTCAGAGAGAAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: MTPIRLCGRSASARC*GLLSALGLAVREKV Trigger: CACCTTCTCTCTGACAGCAAGGCCGAGAGCCGAGAGGAGGCCCCAGCAGCGAGCGGAGGCTGAGCGGCCACACAGCCTTATTGGTGTCAT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS GCA 90 bp | CTTGCTGTCAGAGAGAAGGTGCTTAGATCTCCACAGCTGCGCAGGTaGAGCAGGCCGGGCTGTCTCCTCCAGCTCAACTCCTGGGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LAVREKVLRSPQLRR*SRPGCLLQLNSWAW Trigger: CCAGGCCCAGGAGTTGAGCTGGAGGAGACAGCCCGGCCTGCTGCACCTGCGCAGCTGTGGAGATCTAAGCACCTTCTCTCTGACAGCAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS CCA 90 bp | AGGTGCAGCAGGCCGGGCTGTCTCCTCCAGCTCAACTCCTGGGCCTaGGATGTGCTGGGCTGTGACGGGGCCATTATCTGCTCTAGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: RCSRPGCLLQLNSWA*DVLGCDGAIICSRK Trigger: TTTCCTAGAGCAGATAATGGCCCCGTCACAGCCCAGCACATCCCAGGCCCAGGAGTTGAGCTGGAGGAGACAGCCCGGCCTGCTGCACCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS-3UTR CAA 90 bp | GGATACTGTGAGACCCAGCAGACAAAGGAGCCCTCCCTGCCTTCTTCTCCAACCAGCGGGGTCTGCATCTaGATGCCCGTGGCCTCGCGC | + |
|
Preference number: 5 (lower is better) Translates to: GYCETQQTKEPSLPSSPTSGVCI*MPVASR Trigger: GCGCGAGGCCACGGGCATCAAGATGCAGACCCCGCT...GGTTGGAGAAGAAGGCAGGGAGGGCTCCTTTGTCTGCTGGGTCTCACAGTATCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS GCA 90 bp | CTCTCGGCCTTGCTGTCAGAGAGAAGGTGCTTAGATCTCCACAGCTaGGCAGGTGCAGCAGGCCGGGCTGTCTCCTCCAGCTCAACTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LSALLSERRCLDLHS*AGAAGRAVSSSSTP Trigger: AGGAGTTGAGCTGGAGGAGACAGCCCGGCCTGCTGCACCTGCGCAGCTGTGGAGATCTAAGCACCTTCTCTCTGACAGCAAGGCCGAGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS TCA 90 bp | CGGGGTAGCTCTCTCCTCCGAATGGTGAAGCACAGGGTCGCTCTTTaGTCTTGTCCTCAGAAGGGGGAGAGCTCTCCGGCTTCTCGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RGSSLLRMVKHRVAL*SCPQKGESSPASRR Trigger: CCTCCGAGAAGCCGGAGAGCTCTCCCCCTTCTGAGGACAAGATCAAAGAGCGACCCTGTGCTTCACCATTCGGAGGAGAGAGCTACCCCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS GCA 90 bp | CCTCTCCTCAGAGTCACTGTAGCGAGATCTAGCCTCCTTTCTGTCTaGGTTGCAGCTTCGCAGCTGAGCACCGGGGTAGCTCTCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PLLRVTVARSSLLSV*VAASQLSTGVALSS Trigger: GGAGGAGAGAGCTACCCCGGTGCTCAGCTGCGAAGCTGCAACGCAGACAGAAAGGAGGCTAGATCTCGCTACAGTGACTCTGAGGAGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS TCA 90 bp | ACCTGGGCACGCTGGACACAAACTGGGCTCCTTGACAGCCTAGGATaGAGCCTGCGAGATTTAGGAGGATGCAAACCACAGAGAGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: TWARWTQTGLLDSLG*SLRDLGGCKPQRAA Trigger: TGCTGCTCTCTGTGGTTTGCATCCTCCTAAATCTCGCAGGCTTCATCCTAGGCTGTCAAGGAGCCCAGTTTGTGTCCAGCGTGCCCAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS TCA 90 bp | TCCACCAGATCACACCTGGGCACGCTGGACACAAACTGGGCTCCTTaGCAGCCTAGGATGAAGCCTGCGAGATTTAGGAGGATGCAAACC | + |
|
Preference number: 5 (lower is better) Translates to: STRSHLGTLDTNWAP*QPRMKPARFRRMQT Trigger: GGTTTGCATCCTCCTAAATCTCGCAGGCTTCATCCTAGGCTGTCAAGGAGCCCAGTTTGTGTCCAGCGTGCCCAGGTGTGATCTGGTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS GCA 90 bp | GCTTCGTGTCTATGTATGACCTGTAATCTATCAGAGAGCGGGGTCTaGATCTTGATGCCCGTGGCCTCGCGCCTCTCCTCAGAGTCACTG | + |
|
Preference number: 5 (lower is better) Translates to: ASCLCMTCNLSESGV*ILMPVASRLSSESL Trigger: CAGTGACTCTGAGGAGAGGCGCGAGGCCACGGGCATCAAGATGCAGACCCCGCTCTCTGATAGATTACAGGTCATACATAGACACGAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS CCA 90 bp | CAAAGATCTGGAGGTAGCGCAGGGCAGCAGCCACCAAACACACTGTaGTGGTCAAGGCGTTCAAGGCACACAGGGCAAACAGGACTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: QRSGGSAGQQPPNTL*WSRRSRHTGQTGLS Trigger: AGAAAGTCCTGTTTGCCCTGTGTGCCTTGAACGCCTTGACCACCACAGTGTGTTTGGTGGCTGCTGCCCTGCGCTACCTCCAGATCTTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS-3UTR CAA 90 bp | TTTCTGCTCACCCAGTGTGCACCCCTTGGGGATACTGTGAGACCCAGCAGACAAGGTCGCTCTTTGATCTaGTCCTCAGAAGGGGGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: FLLTQCAPLGDTVRPSRQGRSLI*SSEGGE Trigger: CTCTCCCCCTTCTGAGGACAAGATCAAAGAGCGACC...TTGTCTGCTGGGTCTCACAGTATCCCCAAGGGGTGCACACTGGGTGAGCAGAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS CCA 90 bp | CGTCCTCTGCAGACATCTGGGATTCATCAATACATGGCCTTCTGCTaGCAAAGATCTGGAGGTAGCGCAGGGCAGCAGCCACCAAACACA | + |
|
Preference number: 5 (lower is better) Translates to: RPLQTSGIHQYMAFC*QRSGGSAGQQPPNT Trigger: TGTGTTTGGTGGCTGCTGCCCTGCGCTACCTCCAGATCTTTGCCAGCAGAAGGCCATGTATTGATGAATCCCAGATGTCTGCAGAGGACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS CCA 90 bp | GTGTTCTTCCACGTCCTCTGCAGACATCTGGGATTCATCAATACATaGCCTTCTGCTGGCAAAGATCTGGAGGTAGCGCAGGGCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VFFHVLCRHLGFINT*PSAGKDLEVAQGSS Trigger: GCTGCTGCCCTGCGCTACCTCCAGATCTTTGCCAGCAGAAGGCCATGTATTGATGAATCCCAGATGTCTGCAGAGGACGTGGAAGAACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS TCA 90 bp | TGGGCTGTGACGGGGCCATTATCTGCTCTAGGAAACTGGCACTCGTaGTGGCTTCTTCCATGTGCCCCTCATCGGATTTCAGAACAGACT | + |
|
Preference number: 5 (lower is better) Translates to: WAVTGPLSALGNWHS*WLLPCAPHRISEQT Trigger: AGTCTGTTCTGAAATCCGATGAGGGGCACATGGAAGAAGCCATCACGAGTGCCAGTTTCCTAGAGCAGATAATGGCCCCGTCACAGCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS CCA 90 bp | GAACACTTCCACACCCTTGATGCGTGCTCCATAGATATGGGGCAGTaGGATGACATCAGAACCAACCATCCTGCGGTTCATCCGAGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: EHFHTLDACSIDMGQ*DDIRTNHPAVHPRC Trigger: ACACCTCGGATGAACCGCAGGATGGTTGGTTCTGATGTCATCCCACTGCCCCATATCTATGGAGCACGCATCAAGGGTGTGGAAGTGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS CCA 90 bp | AGTCGTGTTAGTAAGAGCCCCACCTTGAGTTATCTGCGTGCAAACTaGCTCTGCTGGGCTCGCAGCAGTTTCTGGTCCTTCTGGCATTTG | + |
|
Preference number: 5 (lower is better) Translates to: SRVSKSPTLSYLRAN*LCWARSSFWSFWHL Trigger: CAAATGCCAGAAGGACCAGAAACTGCTGCGAGCCCAGCAGAGCCAGTTTGCACGCAGATAACTCAAGGTGGGGCTCTTACTAACACGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS-3UTR CAA 90 bp | CCGCTTAGCTGGTCTGCTGCTTTTCCTAAAGAGGAAGGGATTGAGGGTAACCTAGCACAGGGTCGCTCTTaGATCTTGTCCTCAGAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: PLSWSAAFPKEEGIEGNLAQGRS*ILSSEG Trigger: CCCTTCTGAGGACAAGATCAAAGAGCGACCCTGTGC...TAGGTTACCCTCAATCCCTTCCTCTTTAGGAAAAGCAGCAGACCAGCTAAGCGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS TCA 90 bp | AGCTCTCCGGCTTCTCGGAGGCTGAACCAGAGTGAGAATAGGAGTTaGTCCAGATGTGTTTTCTTCACCAGTCGTGTTAGTAAGAGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: SSPASRRLNQSENRS*SRCVFFTSRVSKSP Trigger: GGGGCTCTTACTAACACGACTGGTGAAGAAAACACATCTGGATCAACTCCTATTCTCACTCTGGTTCAGCCTCCGAGAAGCCGGAGAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS TCA 90 bp | GATCTTGTCCTCAGAAGGGGGAGAGCTCTCCGGCTTCTCGGAGGCTaGACCAGAGTGAGAATAGGAGTTGATCCAGATGTGTTTTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: DLVLRRGRALRLLGG*TRVRIGVDPDVFSS Trigger: TGAAGAAAACACATCTGGATCAACTCCTATTCTCACTCTGGTTCAGCCTCCGAGAAGCCGGAGAGCTCTCCCCCTTCTGAGGACAAGATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS GCA 90 bp | CAGACTTTATGTTCTCTACAAGTTCATGAATGTCCGGAGTCATGCTaGAGGAGGACTGCTCCAGGAACCTGGCCACTAGCAGCTTCGTGT | + |
|
Preference number: 5 (lower is better) Translates to: QTLCSLQVHECPESC*RRTAPGTWPLAASC Trigger: ACACGAAGCTGCTAGTGGCCAGGTTCCTGGAGCAGTCCTCCTGCAGCATGACTCCGGACATTCATGAACTTGTAGAGAACATAAAGTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS GCA 90 bp | GAACAGACTTTATGTTCTCTACAAGTTCATGAATGTCCGGAGTCATaGTGCAGGAGGACTGCTCCAGGAACCTGGCCACTAGCAGCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: EQTLCSLQVHECPES*CRRTAPGTWPLAAS Trigger: CGAAGCTGCTAGTGGCCAGGTTCCTGGAGCAGTCCTCCTGCAGCATGACTCCGGACATTCATGAACTTGTAGAGAACATAAAGTCTGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS CCA 90 bp | AACCAACCATCCTGCGGTTCATCCGAGGTGTGCAGGAGTAAAATGTaGCAAAGTAAGAAGGAGGAGGCACTGGTGGCACAAAGTCATCTG | + |
|
Preference number: 5 (lower is better) Translates to: NQPSCGSSEVCRSKM*QSKKEEALVAQSHL Trigger: CAGATGACTTTGTGCCACCAGTGCCTCCTCCTTCTTACTTTGCCACATTTTACTCCTGCACACCTCGGATGAACCGCAGGATGGTTGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS CCA 90 bp | CATGAATGTCCGGAGTCATGCTGCAGGAGGACTGCTCCAGGAACCTaGCCACTAGCAGCTTCGTGTCTATGTATGACCTGTAATCTATCA | + |
|
Preference number: 5 (lower is better) Translates to: HECPESCCRRTAPGT*PLAASCLCMTCNLS Trigger: TGATAGATTACAGGTCATACATAGACACGAAGCTGCTAGTGGCCAGGTTCCTGGAGCAGTCCTCCTGCAGCATGACTCCGGACATTCATG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS GCA 90 bp | AAAGTCATCTGGGTCTGGAATCCGACCGTGTTCTTCCACGTCCTCTaGAGACATCTGGGATTCATCAATACATGGCCTTCTGCTGGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: KVIWVWNPTVFFHVL*RHLGFINTWPSAGK Trigger: TTTGCCAGCAGAAGGCCATGTATTGATGAATCCCAGATGTCTGCAGAGGACGTGGAAGAACACGGTCGGATTCCAGACCCAGATGACTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS TCA 90 bp | CCCTCATCGGATTTCAGAACAGACTTTATGTTCTCTACAAGTTCATaGATGTCCGGAGTCATGCTGCAGGAGGACTGCTCCAGGAACCTG | + |
|
Preference number: 5 (lower is better) Translates to: PSSDFRTDFMFSTSS*MSGVMLQEDCSRNL Trigger: CAGGTTCCTGGAGCAGTCCTCCTGCAGCATGACTCCGGACATTCATGAACTTGTAGAGAACATAAAGTCTGTTCTGAAATCCGATGAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS-3UTR CAA 90 bp | TGGTCTGCTGCTTTTCCTAAAGAGGAAGGGATTGAGGGTAACCTAAAGGAGGCTCAACAGAAGCAGATCTaGCCTTCACCTAAGTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: WSAAFPKEEGIEGNLKEAQQKQI*PSPKST Trigger: GGTGGACTTAGGTGAAGGCAAGATCTGCTTCTGTTG...AGCCTCCTTTAGGTTACCCTCAATCCCTTCCTCTTTAGGAAAAGCAGCAGACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS CCA 90 bp | GCAAACAGGACTTTCTTAAGCAGAAGGTGCACAGCACTACAAGGCTaGACCGGGAAGAGTTTCAAGGCATTTTCTTTGTCTGTGCATTTG | + |
|
Preference number: 5 (lower is better) Translates to: ANRTFLSRRCTALQG*TGKSFKAFSLSVHL Trigger: CAAATGCACAGACAAAGAAAATGCCTTGAAACTCTTCCCGGTCCAGCCTTGTAGTGCTGTGCACCTTCTGCTTAAGAAAGTCCTGTTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS-3UTR CAA 90 bp | ACAAAACACCGCTTAGCTGGTCTGCTGCTTTTCCTAAAGAGGAAGGGATTGAGGTTCAAGGCATTTTCTTaGTCTGTGCATTTGGCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: TKHRLAGLLLFLKRKGLRFKAFS*SVHLAG Trigger: ACCAGCCAAATGCACAGACAAAGAAAATGCCTTGAA...CCTCAATCCCTTCCTCTTTAGGAAAAGCAGCAGACCAGCTAAGCGGTGTTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS GCA 90 bp | ATTATCTGCTCTAGGAAACTGGCACTCGTGATGGCTTCTTCCATGTaGCCCTCATCGGATTTCAGAACAGACTTTATGTTCTCTACAAGT | + |
|
Preference number: 5 (lower is better) Translates to: IICSRKLALVMASSM*PSSDFRTDFMFSTS Trigger: ACTTGTAGAGAACATAAAGTCTGTTCTGAAATCCGATGAGGGGCACATGGAAGAAGCCATCACGAGTGCCAGTTTCCTAGAGCAGATAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS-3UTR CAA 90 bp | TGGTCTGCTGCTTTTCCTAAAGAGGAAGGGATTGAGGGTAACCTAAAGGAGGCTTGTGCATTTGGCTGGTaGAAATTCTTCACAACAGAA | + |
|
Preference number: 5 (lower is better) Translates to: WSAAFPKEEGIEGNLKEACAFGW*KFFTTE Trigger: TTCTGTTGTGAAGAATTTCAACCAGCCAAATGCACA...AGCCTCCTTTAGGTTACCCTCAATCCCTTCCTCTTTAGGAAAAGCAGCAGACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS TCA 90 bp | GGGAAGAGTTTCAAGGCATTTTCTTTGTCTGTGCATTTGGCTGGTTaGAATTCTTCACAACAGAAGCAGATCTTGCCTTCACCTAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: GKSFKAFSLSVHLAG*NSSQQKQILPSPKS Trigger: GGACTTAGGTGAAGGCAAGATCTGCTTCTGTTGTGAAGAATTTCAACCAGCCAAATGCACAGACAAAGAAAATGCCTTGAAACTCTTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS GCA 72 bp | AAGCTGAGCGCCACCATGCAGCAGCCCAGGATCAGCTaGAGGAGCCCGAGCGACAGCAGCGGGCGCGCGGGC | + |
|
Preference number: 6 (lower is better) Translates to: KLSATMQQPRIS*RSPSDSSGRAG Trigger: GCCCGCGCGCCCGCTGCTGTCGCTCGGGCTCCTGCAGCTGATCCTGGGCTGCTGCATGGTGGCGCTCAGCTT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS TCA 72 bp | CCTGCGGCGAGCTGCTCAGCGACAGCGCCCCGAAGCTaGGCGCCACCATGCAGCAGCCCAGGATCAGCTGCA | + |
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Preference number: 6 (lower is better) Translates to: PAASCSATAPRS*APPCSSPGSAA Trigger: TGCAGCTGATCCTGGGCTGCTGCATGGTGGCGCTCAGCTTCGGGGCGCTGTCGCTGAGCAGCTCGCCGCAGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS CAA 90 bp | GCTCAGCCTCCGCTCGCTGCTGGGGCCTCCTCTCGGCTCTCGGCCTaGCTGTCAGAGAGAAGGTGCTTAGATCTCCACAGCTGCGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: AQPPLAAGASSRLSA*LSERRCLDLHSCAG Trigger: ACCTGCGCAGCTGTGGAGATCTAAGCACCTTCTCTCTGACAGCAAGGCCGAGAGCCGAGAGGAGGCCCCAGCAGCGAGCGGAGGCTGAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS CAA 72 bp | CCGCTCGCTGCTGGGGCCTCCTCTCGGCTCTCGGCCTaGCTGTCAGAGAGAAGGTGCTTAGATCTCCACAGC | + |
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Preference number: 6 (lower is better) Translates to: PLAAGASSRLSA*LSERRCLDLHS Trigger: GCTGTGGAGATCTAAGCACCTTCTCTCTGACAGCAAGGCCGAGAGCCGAGAGGAGGCCCCAGCAGCGAGCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS GCA 72 bp | AGAGAGAAGGTGCTTAGATCTCCACAGCTGCGCAGGTaGAGCAGGCCGGGCTGTCTCCTCCAGCTCAACTCC | + |
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Preference number: 6 (lower is better) Translates to: REKVLRSPQLRR*SRPGCLLQLNS Trigger: GGAGTTGAGCTGGAGGAGACAGCCCGGCCTGCTGCACCTGCGCAGCTGTGGAGATCTAAGCACCTTCTCTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS GCA 72 bp | TTGCTGTCAGAGAGAAGGTGCTTAGATCTCCACAGCTaGGCAGGTGCAGCAGGCCGGGCTGTCTCCTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: LLSERRCLDLHS*AGAAGRAVSSS Trigger: GCTGGAGGAGACAGCCCGGCCTGCTGCACCTGCGCAGCTGTGGAGATCTAAGCACCTTCTCTCTGACAGCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS CCA 72 bp | GATTCCAGAGAGTATCACCGAGGAGCCAGCCCAGAATaGGCACGAGTTCTTCACCTGCGGCGAGCTGCTCAG | + |
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Preference number: 6 (lower is better) Translates to: DSREYHRGASPE*ARVLHLRRAAQ Trigger: CTGAGCAGCTCGCCGCAGGTGAAGAACTCGTGCCCATTCTGGGCTGGCTCCTCGGTGATACTCTCTGGAATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS CCA 72 bp | GGTAGCGCAGGGCAGCAGCCACCAAACACACTGTGGTaGTCAAGGCGTTCAAGGCACACAGGGCAAACAGGA | + |
|
Preference number: 6 (lower is better) Translates to: GSAGQQPPNTLW*SRRSRHTGQTG Trigger: TCCTGTTTGCCCTGTGTGCCTTGAACGCCTTGACCACCACAGTGTGTTTGGTGGCTGCTGCCCTGCGCTACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS CCA 72 bp | GGAGGTAGCGCAGGGCAGCAGCCACCAAACACACTGTaGTGGTCAAGGCGTTCAAGGCACACAGGGCAAACA | + |
|
Preference number: 6 (lower is better) Translates to: GGSAGQQPPNTL*WSRRSRHTGQT Trigger: TGTTTGCCCTGTGTGCCTTGAACGCCTTGACCACCACAGTGTGTTTGGTGGCTGCTGCCCTGCGCTACCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS CAA 72 bp | CCTCCGAATGGTGAAGCACAGGGTCGCTCTTTGATCTaGTCCTCAGAAGGGGGAGAGCTCTCCGGCTTCTCG | + |
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Preference number: 6 (lower is better) Translates to: PPNGEAQGRSLI*SSEGGELSGFS Trigger: CGAGAAGCCGGAGAGCTCTCCCCCTTCTGAGGACAAGATCAAAGAGCGACCCTGTGCTTCACCATTCGGAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS TCA 72 bp | TCACACCTGGGCACGCTGGACACAAACTGGGCTCCTTaGCAGCCTAGGATGAAGCCTGCGAGATTTAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: SHLGTLDTNWAP*QPRMKPARFRR Trigger: CCTCCTAAATCTCGCAGGCTTCATCCTAGGCTGTCAAGGAGCCCAGTTTGTGTCCAGCGTGCCCAGGTGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS TCA 72 bp | TCTCTCCTCCGAATGGTGAAGCACAGGGTCGCTCTTTaGTCTTGTCCTCAGAAGGGGGAGAGCTCTCCGGCT | + |
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Preference number: 6 (lower is better) Translates to: SLLRMVKHRVAL*SCPQKGESSPA Trigger: AGCCGGAGAGCTCTCCCCCTTCTGAGGACAAGATCAAAGAGCGACCCTGTGCTTCACCATTCGGAGGAGAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS TCA 72 bp | CAGCTGAGCACCGGGGTAGCTCTCTCCTCCGAATGGTaGAGCACAGGGTCGCTCTTTGATCTTGTCCTCAGA | + |
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Preference number: 6 (lower is better) Translates to: QLSTGVALSSEW*STGSLFDLVLR Trigger: TCTGAGGACAAGATCAAAGAGCGACCCTGTGCTTCACCATTCGGAGGAGAGAGCTACCCCGGTGCTCAGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS GCA 72 bp | AGAGTCACTGTAGCGAGATCTAGCCTCCTTTCTGTCTaGGTTGCAGCTTCGCAGCTGAGCACCGGGGTAGCT | + |
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Preference number: 6 (lower is better) Translates to: RVTVARSSLLSV*VAASQLSTGVA Trigger: AGCTACCCCGGTGCTCAGCTGCGAAGCTGCAACGCAGACAGAAAGGAGGCTAGATCTCGCTACAGTGACTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS CCA 72 bp | CCGGAGTCATGCTGCAGGAGGACTGCTCCAGGAACCTaGCCACTAGCAGCTTCGTGTCTATGTATGACCTGT | + |
|
Preference number: 6 (lower is better) Translates to: PESCCRRTAPGT*PLAASCLCMTC Trigger: ACAGGTCATACATAGACACGAAGCTGCTAGTGGCCAGGTTCCTGGAGCAGTCCTCCTGCAGCATGACTCCGG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS CAA 72 bp | ATGACCTGTAATCTATCAGAGAGCGGGGTCTGCATCTaGATGCCCGTGGCCTCGCGCCTCTCCTCAGAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: MTCNLSESGVCI*MPVASRLSSES Trigger: TGACTCTGAGGAGAGGCGCGAGGCCACGGGCATCAAGATGCAGACCCCGCTCTCTGATAGATTACAGGTCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS TCA 72 bp | CTCAGAAGGGGGAGAGCTCTCCGGCTTCTCGGAGGCTaGACCAGAGTGAGAATAGGAGTTGATCCAGATGTG | + |
|
Preference number: 6 (lower is better) Translates to: LRRGRALRLLGG*TRVRIGVDPDV Trigger: CACATCTGGATCAACTCCTATTCTCACTCTGGTTCAGCCTCCGAGAAGCCGGAGAGCTCTCCCCCTTCTGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS GCA 72 bp | CTATGTATGACCTGTAATCTATCAGAGAGCGGGGTCTaGATCTTGATGCCCGTGGCCTCGCGCCTCTCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: LCMTCNLSESGV*ILMPVASRLSS Trigger: TGAGGAGAGGCGCGAGGCCACGGGCATCAAGATGCAGACCCCGCTCTCTGATAGATTACAGGTCATACATAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS CCA 72 bp | AGATCTTGCCTTCACCTAAGTCCACCAGATCACACCTaGGCACGCTGGACACAAACTGGGCTCCTTGACAGC | + |
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Preference number: 6 (lower is better) Translates to: RSCLHLSPPDHT*ARWTQTGLLDS Trigger: GCTGTCAAGGAGCCCAGTTTGTGTCCAGCGTGCCCAGGTGTGATCTGGTGGACTTAGGTGAAGGCAAGATCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS CCA 72 bp | CCCACCTTGAGTTATCTGCGTGCAAACTGGCTCTGCTaGGCTCGCAGCAGTTTCTGGTCCTTCTGGCATTTG | + |
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Preference number: 6 (lower is better) Translates to: PTLSYLRANWLC*ARSSFWSFWHL Trigger: CAAATGCCAGAAGGACCAGAAACTGCTGCGAGCCCAGCAGAGCCAGTTTGCACGCAGATAACTCAAGGTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS CCA 72 bp | AGTAAGAGCCCCACCTTGAGTTATCTGCGTGCAAACTaGCTCTGCTGGGCTCGCAGCAGTTTCTGGTCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SKSPTLSYLRAN*LCWARSSFWSF Trigger: GAAGGACCAGAAACTGCTGCGAGCCCAGCAGAGCCAGTTTGCACGCAGATAACTCAAGGTGGGGCTCTTACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS TCA 72 bp | CGCTGGACACAAACTGGGCTCCTTGACAGCCTAGGATaGAGCCTGCGAGATTTAGGAGGATGCAAACCACAG | + |
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Preference number: 6 (lower is better) Translates to: RWTQTGLLDSLG*SLRDLGGCKPQ Trigger: CTGTGGTTTGCATCCTCCTAAATCTCGCAGGCTTCATCCTAGGCTGTCAAGGAGCCCAGTTTGTGTCCAGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS GCA 72 bp | GCACACAGGGCAAACAGGACTTTCTTAAGCAGAAGGTaGACAGCACTACAAGGCTGGACCGGGAAGAGTTTC | + |
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Preference number: 6 (lower is better) Translates to: AHRANRTFLSRR*TALQGWTGKSF Trigger: GAAACTCTTCCCGGTCCAGCCTTGTAGTGCTGTGCACCTTCTGCTTAAGAAAGTCCTGTTTGCCCTGTGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS GCA 72 bp | GTCCAGAGGACAGAACACTTCCACACCCTTGATGCGTaGTCCATAGATATGGGGCAGTGGGATGACATCAGA | + |
|
Preference number: 6 (lower is better) Translates to: VQRTEHFHTLDA*SIDMGQWDDIR Trigger: TCTGATGTCATCCCACTGCCCCATATCTATGGAGCACGCATCAAGGGTGTGGAAGTGTTCTGTCCTCTGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS GCA 72 bp | TGTTCTCTACAAGTTCATGAATGTCCGGAGTCATGCTaGAGGAGGACTGCTCCAGGAACCTGGCCACTAGCA | + |
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Preference number: 6 (lower is better) Translates to: CSLQVHECPESC*RRTAPGTWPLA Trigger: TGCTAGTGGCCAGGTTCCTGGAGCAGTCCTCCTGCAGCATGACTCCGGACATTCATGAACTTGTAGAGAACA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS CCA 72 bp | CACGTCCTCTGCAGACATCTGGGATTCATCAATACATaGCCTTCTGCTGGCAAAGATCTGGAGGTAGCGCAG | + |
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Preference number: 6 (lower is better) Translates to: HVLCRHLGFINT*PSAGKDLEVAQ Trigger: CTGCGCTACCTCCAGATCTTTGCCAGCAGAAGGCCATGTATTGATGAATCCCAGATGTCTGCAGAGGACGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS CCA 72 bp | TCCTGCGGTTCATCCGAGGTGTGCAGGAGTAAAATGTaGCAAAGTAAGAAGGAGGAGGCACTGGTGGCACAA | + |
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Preference number: 6 (lower is better) Translates to: SCGSSEVCRSKM*QSKKEEALVAQ Trigger: TTGTGCCACCAGTGCCTCCTCCTTCTTACTTTGCCACATTTTACTCCTGCACACCTCGGATGAACCGCAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS CCA 72 bp | CACACCCTTGATGCGTGCTCCATAGATATGGGGCAGTaGGATGACATCAGAACCAACCATCCTGCGGTTCAT | + |
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Preference number: 6 (lower is better) Translates to: HTLDACSIDMGQ*DDIRTNHPAVH Trigger: ATGAACCGCAGGATGGTTGGTTCTGATGTCATCCCACTGCCCCATATCTATGGAGCACGCATCAAGGGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS CCA 72 bp | GGTCCTTCTGGCATTTGGAATGAAGACTCCTGCTCCTaGTCAGTCTGGCTCACTACAGCTTCGTATGGAGGT | + |
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Preference number: 6 (lower is better) Translates to: GPSGIWNEDSCS*SVWLTTASYGG Trigger: ACCTCCATACGAAGCTGTAGTGAGCCAGACTGACCAGGAGCAGGAGTCTTCATTCCAAATGCCAGAAGGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS TCA 72 bp | GCAGTATCATGGGCCTTTTCCAAGTCGTCAATCCAATaGTTCCAGAGAGTATCACCGAGGAGCCAGCCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: AVSWAFSKSSIQ*FQRVSPRSQPR Trigger: TCTGGGCTGGCTCCTCGGTGATACTCTCTGGAATCATTGGATTGACGACTTGGAAAAGGCCCATGATACTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS TCA 72 bp | TTTTCTTCACCAGTCGTGTTAGTAAGAGCCCCACCTTaGGTTATCTGCGTGCAAACTGGCTCTGCTGGGCTC | + |
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Preference number: 6 (lower is better) Translates to: FSSPVVLVRAPP*VICVQTGSAGL Trigger: GAGCCCAGCAGAGCCAGTTTGCACGCAGATAACTCAAGGTGGGGCTCTTACTAACACGACTGGTGAAGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS CCA 72 bp | ATCCGACCGTGTTCTTCCACGTCCTCTGCAGACATCTaGGATTCATCAATACATGGCCTTCTGCTGGCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: IRPCSSTSSADI*DSSIHGLLLAK Trigger: CTTTGCCAGCAGAAGGCCATGTATTGATGAATCCCAGATGTCTGCAGAGGACGTGGAAGAACACGGTCGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS CCA 72 bp | GTAAAATGTGGCAAAGTAAGAAGGAGGAGGCACTGGTaGCACAAAGTCATCTGGGTCTGGAATCCGACCGTG | + |
|
Preference number: 6 (lower is better) Translates to: VKCGKVRRRRHW*HKVIWVWNPTV Trigger: CACGGTCGGATTCCAGACCCAGATGACTTTGTGCCACCAGTGCCTCCTCCTTCTTACTTTGCCACATTTTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS CCA 72 bp | GGAGTAAAATGTGGCAAAGTAAGAAGGAGGAGGCACTaGTGGCACAAAGTCATCTGGGTCTGGAATCCGACC | + |
|
Preference number: 6 (lower is better) Translates to: GVKCGKVRRRRH*WHKVIWVWNPT Trigger: GGTCGGATTCCAGACCCAGATGACTTTGTGCCACCAGTGCCTCCTCCTTCTTACTTTGCCACATTTTACTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS CAA 72 bp | GTTTTCTTCACCAGTCGTGTTAGTAAGAGCCCCACCTaGAGTTATCTGCGTGCAAACTGGCTCTGCTGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: VFFTSRVSKSPT*SYLRANWLCWA Trigger: AGCCCAGCAGAGCCAGTTTGCACGCAGATAACTCAAGGTGGGGCTCTTACTAACACGACTGGTGAAGAAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS GCA 72 bp | CATCAGAACCAACCATCCTGCGGTTCATCCGAGGTGTaGAGGAGTAAAATGTGGCAAAGTAAGAAGGAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: HQNQPSCGSSEV*RSKMWQSKKEE Trigger: CTCCTCCTTCTTACTTTGCCACATTTTACTCCTGCACACCTCGGATGAACCGCAGGATGGTTGGTTCTGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS GCA 72 bp | TTATGTTCTCTACAAGTTCATGAATGTCCGGAGTCATaGTGCAGGAGGACTGCTCCAGGAACCTGGCCACTA | + |
|
Preference number: 6 (lower is better) Translates to: LCSLQVHECPES*CRRTAPGTWPL Trigger: TAGTGGCCAGGTTCCTGGAGCAGTCCTCCTGCAGCATGACTCCGGACATTCATGAACTTGTAGAGAACATAA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS GCA 72 bp | TGGCTGGTTGAAATTCTTCACAACAGAAGCAGATCTTaGCTTCACCTAAGTCCACCAGATCACACCTGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: WLVEILHNRSRS*LHLSPPDHTWA Trigger: TGCCCAGGTGTGATCTGGTGGACTTAGGTGAAGGCAAGATCTGCTTCTGTTGTGAAGAATTTCAACCAGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS GCA 72 bp | TCTAGGAAACTGGCACTCGTGATGGCTTCTTCCATGTaGCCCTCATCGGATTTCAGAACAGACTTTATGTTC | + |
|
Preference number: 6 (lower is better) Translates to: SRKLALVMASSM*PSSDFRTDFMF Trigger: GAACATAAAGTCTGTTCTGAAATCCGATGAGGGGCACATGGAAGAAGCCATCACGAGTGCCAGTTTCCTAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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| CDS TCA 72 bp | GATTTCAGAACAGACTTTATGTTCTCTACAAGTTCATaGATGTCCGGAGTCATGCTGCAGGAGGACTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: DFRTDFMFSTSS*MSGVMLQEDCS Trigger: GGAGCAGTCCTCCTGCAGCATGACTCCGGACATTCATGAACTTGTAGAGAACATAAAGTCTGTTCTGAAATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096164.6 |
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