RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FAM189A1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000030518

Ensembl transcript IDs: ENSMUST00000119118.8, ENSMUST00000148459.3, ENSMUST00000149851.8

Found 216 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGGTTCAAGGATGGGAGACTGTGTGGGAGGGACCTAGGGAGGAGGTaGGTAGCAGCCCACAGACAGAGGCCTAATGGGGAGGCCCAGTAC +
Preference number: 1 (lower is better)
Translates to: WFKDGRLCGRDLGRR*VAAHRQRPNGEAQY
Trigger: GTACTGGGCCTCCCCATTAGGCCTCTGTCTGTGGGCTGCTACCCACCTCCTCCCTAGGTCCCTCCCACACAGTCTCCCATCCTTGAACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR GCA 90 bp GGCTCACAGGCCCATGGCGGTGCAGTGATTGCCCTTGATTATACCTaGTGCTGTGGGGGAAGCAGATGTGGGCGTTTCTGGCTTTTGCAG +
Preference number: 1 (lower is better)
Translates to: GSQAHGGAVIALDYT*CCGGSRCGRFWLLQ
Trigger: CTGCAAAAGCCAGAAACGCCCACATCTGCTTCCCCCACAGCAGCAGGTATAATCAAGGGCAATCACTGCACCGCCATGGGCCTGTGAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR TCA 90 bp CTTGCCCAAGCCACCAGCGAGCTTCCTGGATATCCTGGATGTTCTTaGCCCAGCAGGCCAAAGGCCTTTCTCTACCAAGCACGGTGGCAT +
Preference number: 1 (lower is better)
Translates to: LAQATSELPGYPGCS*PSRPKAFLYQARWH
Trigger: ATGCCACCGTGCTTGGTAGAGAAAGGCCTTTGGCCTGCTGGGTCAAGAACATCCAGGATATCCAGGAAGCTCGCTGGTGGCTTGGGCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR GCA 90 bp TCACAGGCCCATGGCGGTGCAGTGATTGCCCTTGATTATACCTGCTaGTGTGGGGGAAGCAGATGTGGGCGTTTCTGGCTTTTGCAGGAA +
Preference number: 1 (lower is better)
Translates to: SQAHGGAVIALDYTC*CGGSRCGRFWLLQE
Trigger: TTCCTGCAAAAGCCAGAAACGCCCACATCTGCTTCCCCCACAGCAGCAGGTATAATCAAGGGCAATCACTGCACCGCCATGGGCCTGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR CCA 90 bp TGTTGTCTAGTGGCTGTTACCAGTACCTCTGGCTTCCTGGAAGCCTaGAGGTTGGGCATTTTTAATGCCCTCTTGGTCCATCTGGGGCCC +
Preference number: 1 (lower is better)
Translates to: CCLVAVTSTSGFLEA*RLGIFNALLVHLGP
Trigger: GGGCCCCAGATGGACCAAGAGGGCATTAAAAATGCCCAACCTCCAGGCTTCCAGGAAGCCAGAGGTACTGGTAACAGCCACTAGACAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR CCA 90 bp GGCCCAGGGCCTGGCAAGCCAGGCATGAGAGCATCTCCTCCCAAATaGTTACTATTGGACCCAGTTCAGATATCAACACAAGCAGGGACA +
Preference number: 1 (lower is better)
Translates to: GPGPGKPGMRASPPK*LLLDPVQISTQAGT
Trigger: TGTCCCTGCTTGTGTTGATATCTGAACTGGGTCCAATAGTAACCATTTGGGAGGAGATGCTCTCATGCCTGGCTTGCCAGGCCCTGGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR CCA 90 bp GGAGAAAGAGTAACAGTTCCTTGCCCAAGCCACCAGCGAGCTTCCTaGATATCCTGGATGTTCTTGACCCAGCAGGCCAAAGGCCTTTCT +
Preference number: 1 (lower is better)
Translates to: GERVTVPCPSHQRAS*ISWMFLTQQAKGLS
Trigger: AGAAAGGCCTTTGGCCTGCTGGGTCAAGAACATCCAGGATATCCAGGAAGCTCGCTGGTGGCTTGGGCAAGGAACTGTTACTCTTTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR CCA 90 bp CTTGATTATACCTGCTGCTGTGGGGGAAGCAGATGTGGGCGTTTCTaGCTTTTGCAGGAAGTGCTTTCAAGCAGTGCTGCTCCAGACCCA +
Preference number: 1 (lower is better)
Translates to: LDYTCCCGGSRCGRF*LLQEVLSSSAAPDP
Trigger: TGGGTCTGGAGCAGCACTGCTTGAAAGCACTTCCTGCAAAAGCCAGAAACGCCCACATCTGCTTCCCCCACAGCAGCAGGTATAATCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR GCA 90 bp AGATATCAACACAAGCAGGGACAGACCTTCCAAGATGGAAGGTTGTaGAGGCAATGTGAAGAAAGACGGCTTTGCTTCCGCAAGGGACCC +
Preference number: 1 (lower is better)
Translates to: RYQHKQGQTFQDGRL*RQCEERRLCFRKGP
Trigger: GGGTCCCTTGCGGAAGCAAAGCCGTCTTTCTTCACATTGCCTGCACAACCTTCCATCTTGGAAGGTCTGTCCCTGCTTGTGTTGATATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR CCA 90 bp CTCCAAGCTTGGGTCAGTTGGAATGGGGTCGGCCCTGGCTTCTCTTaGATCATGGCTTGTTCTGAGATCCACAAATGTTTAAGCACACTG +
Preference number: 1 (lower is better)
Translates to: LQAWVSWNGVGPGFS*IMACSEIHKCLSTL
Trigger: CAGTGTGCTTAAACATTTGTGGATCTCAGAACAAGCCATGATCCAAGAGAAGCCAGGGCCGACCCCATTCCAACTGACCCAAGCTTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR GCA 90 bp GGCACAGAGGAGCATCGAGTGTTAAAGGCCTTGACTTGGGACAGATaGAGTGTCTTTATGTTCCAAAAGTGTCCCCTGTCCCAGAATTGG +
Preference number: 1 (lower is better)
Translates to: GTEEHRVLKALTWDR*SVFMFQKCPLSQNW
Trigger: CCAATTCTGGGACAGGGGACACTTTTGGAACATAAAGACACTGCATCTGTCCCAAGTCAAGGCCTTTAACACTCGATGCTCCTCTGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR TCA 90 bp TCAAGCAGTGCTGCTCCAGACCCATTGCTGAGAAGTGGTTGCTGTTaGTCTTGCCAGAAAATGCGGTCTGAAACAGCCAAGAATGTCTTA +
Preference number: 1 (lower is better)
Translates to: SSSAAPDPLLRSGCC*SCQKMRSETAKNVL
Trigger: TAAGACATTCTTGGCTGTTTCAGACCGCATTTTCTGGCAAGATCAACAGCAACCACTTCTCAGCAATGGGTCTGGAGCAGCACTGCTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR TCA 90 bp TTTTGCAGGAAGTGCTTTCAAGCAGTGCTGCTCCAGACCCATTGCTaGGAAGTGGTTGCTGTTGATCTTGCCAGAAAATGCGGTCTGAAA +
Preference number: 1 (lower is better)
Translates to: FCRKCFQAVLLQTHC*EVVAVDLARKCGLK
Trigger: TTTCAGACCGCATTTTCTGGCAAGATCAACAGCAACCACTTCTCAGCAATGGGTCTGGAGCAGCACTGCTTGAAAGCACTTCCTGCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR CCA 90 bp AATAAATACAACCTTTCCAGTTGTACGAACAGGTCTCTGGTGGTCTaGAAACAACTTCCTATAAACTCTGCCTCAGCAGCAGCTGTGGGC +
Preference number: 1 (lower is better)
Translates to: NKYNLSSCTNRSLVV*KQLPINSASAAAVG
Trigger: GCCCACAGCTGCTGCTGAGGCAGAGTTTATAGGAAGTTGTTTCCAGACCACCAGAGACCTGTTCGTACAACTGGAAAGGTTGTATTTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR GCA 90 bp CATCTCTATTATGTCTCCTGTGGAAAAGCCAAGACTACTGTCAAATaGCCGATTTATATTTTCCAGCTTGCTAACCTCAGAAAGGCAACA +
Preference number: 1 (lower is better)
Translates to: HLYYVSCGKAKTTVK*PIYIFQLANLRKAT
Trigger: TGTTGCCTTTCTGAGGTTAGCAAGCTGGAAAATATAAATCGGGCATTTGACAGTAGTCTTGGCTTTTCCACAGGAGACATAATAGAGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR-3UTR CCA 90 bp TCTAGTGGCTGTTACCAGTACCTCTGGCTTCCTGGAAGCCTGGAGGTTGGGCATTTATACCTGCTGCTGTaGGGGAAGCAGATGTGGGCG +
Preference number: 2 (lower is better)
Translates to: SSGCYQYLWLPGSLEVGHLYLLL*GKQMWA
Trigger: CGCCCACATCTGCTTCCCCCACAGCAGCAGGTATAA...ATGCCCAACCTCCAGGCTTCCAGGAAGCCAGAGGTACTGGTAACAGCCACTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR CAA 90 bp CTAGTGGCTGTTACCAGTACCTCTGGCTTCCTGGAAGCCTGGAGGTaGGGCATTTTTAATGCCCTCTTGGTCCATCTGGGGCCCAGAGAA +
Preference number: 2 (lower is better)
Translates to: LVAVTSTSGFLEAWR*GIFNALLVHLGPRE
Trigger: TTCTCTGGGCCCCAGATGGACCAAGAGGGCATTAAAAATGCCCAACCTCCAGGCTTCCAGGAAGCCAGAGGTACTGGTAACAGCCACTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR-3UTR CCA 90 bp GAGAGAAGAGTATCCTATGCCTACCAGCTGGCCACTGAACAATGGAAGGAACACGACCTAGGGAGGAGGTaGGTAGCAGCCCACAGACAG +
Preference number: 2 (lower is better)
Translates to: ERRVSYAYQLATEQWKEHDLGRR*VAAHRQ
Trigger: CTGTCTGTGGGCTGCTACCCACCTCCTCCCTAGGTC...GTGTTCCTTCCATTGTTCAGTGGCCAGCTGGTAGGCATAGGATACTCTTCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR-3UTR CCA 90 bp GAGAGAAGAGTATCCTATGCCTACCAGCTGGCCACTGAACAATGGAAGGAACACGGATGGGAGACTGTGTaGGAGGGACCTAGGGAGGAG +
Preference number: 2 (lower is better)
Translates to: ERRVSYAYQLATEQWKEHGWETV*EGPREE
Trigger: CTCCTCCCTAGGTCCCTCCCACACAGTCTCCCATCC...GTGTTCCTTCCATTGTTCAGTGGCCAGCTGGTAGGCATAGGATACTCTTCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR-3UTR CCA 90 bp GAGAGAAGAGTATCCTATGCCTACCAGCTGGCCACTGAACAATGGAAGGAACACAGGCTCACAGGCCCATaGCGGTGCAGTGATTGCCCT +
Preference number: 2 (lower is better)
Translates to: ERRVSYAYQLATEQWKEHRLTGP*RCSDCP
Trigger: AGGGCAATCACTGCACCGCCATGGGCCTGTGAGCCT...GTGTTCCTTCCATTGTTCAGTGGCCAGCTGGTAGGCATAGGATACTCTTCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR-3UTR CCA 90 bp TCTAGTGGCTGTTACCAGTACCTCTGGCTTCCTGGAAGCCTGGAGGTTGGGCATCTGGCCACTGAACAATaGAAGGAACACTCTGGTCCA +
Preference number: 2 (lower is better)
Translates to: SSGCYQYLWLPGSLEVGHLATEQ*KEHSGP
Trigger: TGGACCAGAGTGTTCCTTCCATTGTTCAGTGGCCAG...ATGCCCAACCTCCAGGCTTCCAGGAAGCCAGAGGTACTGGTAACAGCCACTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR-3UTR TCA 90 bp GAGAGAAGAGTATCCTATGCCTACCAGCTGGCCACTGAACAATGGAAGGAACACTGCTGCCACCTGAGTTaGGAAGGGACAACTCTGGGT +
Preference number: 2 (lower is better)
Translates to: ERRVSYAYQLATEQWKEHCCHLS*EGTTLG
Trigger: ACCCAGAGTTGTCCCTTCTCAACTCAGGTGGCAGCA...GTGTTCCTTCCATTGTTCAGTGGCCAGCTGGTAGGCATAGGATACTCTTCTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR-3UTR CCA 90 bp ACCCAAAATGAGCTTTCCACTCCAGGGCTGGCTGCAAGCGTTTCAAATTCTACCCCCTCTTGGTCCATCTaGGGCCCAGAGAAGGTAAAC +
Preference number: 2 (lower is better)
Translates to: TQNELSTPGLAASVSNSTPSWSI*GPEKVN
Trigger: GTTTACCTTCTCTGGGCCCCAGATGGACCAAGAGGG...GGTAGAATTTGAAACGCTTGCAGCCAGCCCTGGAGTGGAAAGCTCATTTTGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR CAA 90 bp ACAGTCCCCAGGAAGACAACTGATGGGAGAAAGAGTAACAGTTCCTaGCCCAAGCCACCAGCGAGCTTCCTGGATATCCTGGATGTTCTT +
Preference number: 2 (lower is better)
Translates to: TVPRKTTDGRKSNSS*PKPPASFLDILDVL
Trigger: AAGAACATCCAGGATATCCAGGAAGCTCGCTGGTGGCTTGGGCAAGGAACTGTTACTCTTTCTCCCATCAGTTGTCTTCCTGGGGACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR CAA 90 bp CCTGGCAAGCCAGGCATGAGAGCATCTCCTCCCAAATGGTTACTATaGGACCCAGTTCAGATATCAACACAAGCAGGGACAGACCTTCCA +
Preference number: 2 (lower is better)
Translates to: PGKPGMRASPPKWLL*DPVQISTQAGTDLP
Trigger: TGGAAGGTCTGTCCCTGCTTGTGTTGATATCTGAACTGGGTCCAATAGTAACCATTTGGGAGGAGATGCTCTCATGCCTGGCTTGCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR-3UTR TCA 90 bp AATAAATACAACCTTTCCAGTTGTACGAACAGGTCTCTGGTGGTCTGGAAACAAGCAGCAGCTGTGGGCTaGCACAGCCACATGGGGTGG +
Preference number: 2 (lower is better)
Translates to: NKYNLSSCTNRSLVVWKQAAAVG*HSHMGW
Trigger: CCACCCCATGTGGCTGTGTCAGCCCACAGCTGCTGC...TTGTTTCCAGACCACCAGAGACCTGTTCGTACAACTGGAAAGGTTGTATTTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR-3UTR GCA 90 bp TCTAGTGGCTGTTACCAGTACCTCTGGCTTCCTGGAAGCCTGGAGGTTGGGCATGATCTTGCCAGAAAATaGGGTCTGAAACAGCCAAGA +
Preference number: 2 (lower is better)
Translates to: SSGCYQYLWLPGSLEVGHDLARK*GLKQPR
Trigger: TCTTGGCTGTTTCAGACCGCATTTTCTGGCAAGATC...ATGCCCAACCTCCAGGCTTCCAGGAAGCCAGAGGTACTGGTAACAGCCACTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR-3UTR GCA 90 bp GAGAGAAGAGTATCCTATGCCTACCAGCTGGCCACTGAACAATGGAAGGAACACGCCCTTGATTATACCTaGTGCTGTGGGGGAAGCAGA +
Preference number: 2 (lower is better)
Translates to: ERRVSYAYQLATEQWKEHALDYT*CCGGSR
Trigger: TCTGCTTCCCCCACAGCAGCAGGTATAATCAAGGGC...GTGTTCCTTCCATTGTTCAGTGGCCAGCTGGTAGGCATAGGATACTCTTCTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR-3UTR CCA 90 bp ACCCAAAATGAGCTTTCCACTCCAGGGCTGGCTGCAAGCGTTTCAAATTCTACCTGGGGGAAGCAGATGTaGGCGTTTCTGGCTTTTGCA +
Preference number: 2 (lower is better)
Translates to: TQNELSTPGLAASVSNSTWGKQM*AFLAFA
Trigger: TGCAAAAGCCAGAAACGCCCACATCTGCTTCCCCCA...GGTAGAATTTGAAACGCTTGCAGCCAGCCCTGGAGTGGAAAGCTCATTTTGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR-3UTR TCA 90 bp TTGCTAACCTCAGAAAGGCAACAGCTTATGGCAATGGTAAAGCCATCAGGGCATTATCCTGGATGTTCTTaGCCCAGCAGGCCAAAGGCC +
Preference number: 2 (lower is better)
Translates to: LLTSERQQLMAMVKPSGHYPGCS*PSRPKA
Trigger: GGCCTTTGGCCTGCTGGGTCAAGAACATCCAGGATA...ATGCCCTGATGGCTTTACCATTGCCATAAGCTGTTGCCTTTCTGAGGTTAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR-3UTR TCA 90 bp AACCTTTCCAGTTGTACGAACAGGTCTCTGGTGGTCTGGAAACAACTTCCTATACAGGGTAGTAGAGGATaGAGGACAGGCAAGGGCAGG +
Preference number: 2 (lower is better)
Translates to: NLSSCTNRSLVVWKQLPIQGSRG*RTGKGR
Trigger: CCTGCCCTTGCCTGTCCTTCATCCTCTACTACCCTG...TATAGGAAGTTGTTTCCAGACCACCAGAGACCTGTTCGTACAACTGGAAAGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR CAA 90 bp AACCAAACCAGGCACAGAGGAGCATCGAGTGTTAAAGGCCTTGACTaGGGACAGATGCAGTGTCTTTATGTTCCAAAAGTGTCCCCTGTC +
Preference number: 2 (lower is better)
Translates to: NQTRHRGASSVKGLD*GQMQCLYVPKVSPV
Trigger: GACAGGGGACACTTTTGGAACATAAAGACACTGCATCTGTCCCAAGTCAAGGCCTTTAACACTCGATGCTCCTCTGTGCCTGGTTTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR-3UTR TCA 90 bp AGAAGAGTATCCTATGCCTACCAGCTGGCCACTGAACAATGGAAGGAACACTCTCTCCAGACCCATTGCTaGGAAGTGGTTGCTGTTGAT +
Preference number: 2 (lower is better)
Translates to: RRVSYAYQLATEQWKEHSLQTHC*EVVAVD
Trigger: ATCAACAGCAACCACTTCTCAGCAATGGGTCTGGAG...AGAGTGTTCCTTCCATTGTTCAGTGGCCAGCTGGTAGGCATAGGATACTCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR-3UTR CCA 90 bp GCAAGCGTTTCAAATTCTACCAGCGTCTCCCTGGGAAGGAGACTTAAGTCCTTGCAAGGGCAGGCAAGATaGAGAGAAGAGTATCCTATG +
Preference number: 2 (lower is better)
Translates to: ASVSNSTSVSLGRRLKSLQGQAR*REEYPM
Trigger: CATAGGATACTCTTCTCTCCATCTTGCCTGCCCTTG...CAAGGACTTAAGTCTCCTTCCCAGGGAGACGCTGGTAGAATTTGAAACGCTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR-3UTR GCA 90 bp TCTGGTGGTCTGGAAACAACTTCCTATAAACTCTGCCTCAGCAGCAGCTGTGGGCGACTCCATTGCCACTaGTACTCTCTAATCTTAACA +
Preference number: 2 (lower is better)
Translates to: SGGLETTSYKLCLSSSCGRLHCH*YSLILT
Trigger: TGTTAAGATTAGAGAGTAGCAGTGGCAATGGAGTCG...CCCACAGCTGCTGCTGAGGCAGAGTTTATAGGAAGTTGTTTCCAGACCACCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR-3UTR CCA 90 bp CTCCATTGCCACTGCTACTCTCTAATCTTAACACTGAACCAAACCAGGCACAGACACCAGCGAGCTTCCTaGATATCCTGGATGTTCTTG +
Preference number: 2 (lower is better)
Translates to: LHCHCYSLILTLNQTRHRHQRAS*ISWMFL
Trigger: CAAGAACATCCAGGATATCCAGGAAGCTCGCTGGTG...TCTGTGCCTGGTTTGGTTCAGTGTTAAGATTAGAGAGTAGCAGTGGCAATGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR-3UTR CCA 90 bp GAGAGAAGAGTATCCTATGCCTACCAGCTGGCCACTGAACAATGGAAGGAACACCCCCTGTCCCAGAATTaGTATTCCCATCACATTCTT +
Preference number: 2 (lower is better)
Translates to: ERRVSYAYQLATEQWKEHPLSQN*YSHHIL
Trigger: AAGAATGTGATGGGAATACCAATTCTGGGACAGGGG...GTGTTCCTTCCATTGTTCAGTGGCCAGCTGGTAGGCATAGGATACTCTTCTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR-3UTR CCA 90 bp AACCTTTCCAGTTGTACGAACAGGTCTCTGGTGGTCTGGAAACAACTTCCTATAGAGAAGGGACAACTCTaGGTCATGAGAGAGGCTTGC +
Preference number: 2 (lower is better)
Translates to: NLSSCTNRSLVVWKQLPIEKGQL*VMREAC
Trigger: GCAAGCCTCTCTCATGACCCAGAGTTGTCCCTTCTC...TATAGGAAGTTGTTTCCAGACCACCAGAGACCTGTTCGTACAACTGGAAAGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR-3UTR CCA 90 bp TCTTGGTCCATCTGGGGCCCAGAGAAGGTAAACAAAGACATATCTGTCATCAAAGGCCCTGGCTTCTCTTaGATCATGGCTTGTTCTGAG +
Preference number: 2 (lower is better)
Translates to: SWSIWGPEKVNKDISVIKGPGFS*IMACSE
Trigger: CTCAGAACAAGCCATGATCCAAGAGAAGCCAGGGCC...TTTGATGACAGATATGTCTTTGTTTACCTTCTCTGGGCCCCAGATGGACCAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR-3UTR TCA 90 bp AGAAGAGTATCCTATGCCTACCAGCTGGCCACTGAACAATGGAAGGAACACTCTCCCGAAATAAGGCATTaGCCATTTGCATCCTTCAAC +
Preference number: 2 (lower is better)
Translates to: RRVSYAYQLATEQWKEHSPEIRH*PFASFN
Trigger: GTTGAAGGATGCAAATGGTCAATGCCTTATTTCGGG...AGAGTGTTCCTTCCATTGTTCAGTGGCCAGCTGGTAGGCATAGGATACTCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR-3UTR TCA 90 bp TCTTGGTCCATCTGGGGCCCAGAGAAGGTAAACAAAGACATATCTGTCATCAAAAAGTACTTCGTGCTATaGAGCTTGGGGCAAGCCACT +
Preference number: 2 (lower is better)
Translates to: SWSIWGPEKVNKDISVIKKYFVL*SLGQAT
Trigger: AGTGGCTTGCCCCAAGCTTCATAGCACGAAGTACTT...TTTGATGACAGATATGTCTTTGTTTACCTTCTCTGGGCCCCAGATGGACCAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR-3UTR GCA 90 bp AGCATGAAGTGCTGTAGTTTCTTTATCCATCTTATAAGCCTGTTAGGGGAGCCATGCAGGGCCAGACTTTaGAGGCTTATCAGTGTCCAC +
Preference number: 2 (lower is better)
Translates to: SMKCCSFFIHLISLLGEPCRARL*RLISVH
Trigger: GTGGACACTGATAAGCCTGCAAAGTCTGGCCCTGCA...TGGCTCCCCTAACAGGCTTATAAGATGGATAAAGAAACTACAGCACTTCATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR-3UTR GCA 90 bp TTGCTAACCTCAGAAAGGCAACAGCTTATGGCAATGGTAAAGCCATCAGGGCATGGCGTTTCTGGCTTTTaGAGGAAGTGCTTTCAAGCA +
Preference number: 2 (lower is better)
Translates to: LLTSERQQLMAMVKPSGHGVSGF*RKCFQA
Trigger: TGCTTGAAAGCACTTCCTGCAAAAGCCAGAAACGCC...ATGCCCTGATGGCTTTACCATTGCCATAAGCTGTTGCCTTTCTGAGGTTAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR-3UTR CCA 90 bp CTCTATTATGTCTCCTGTGGAAAAGCCAAGACTACTGTCAAATGCCCGATTTATGCTGTGGTTCAAGGATaGGAGACTGTGTGGGAGGGA +
Preference number: 2 (lower is better)
Translates to: LYYVSCGKAKTTVKCPIYAVVQG*ETVWEG
Trigger: TCCCTCCCACACAGTCTCCCATCCTTGAACCACAGC...ATAAATCGGGCATTTGACAGTAGTCTTGGCTTTTCCACAGGAGACATAATAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR-3UTR CCA 90 bp ACCCAAAATGAGCTTTCCACTCCAGGGCTGGCTGCAAGCGTTTCAAATTCTACCAACAAGTATTTGCTGTaGTTCAAGGATGGGAGACTG +
Preference number: 2 (lower is better)
Translates to: TQNELSTPGLAASVSNSTNKYLL*FKDGRL
Trigger: CAGTCTCCCATCCTTGAACCACAGCAAATACTTGTT...GGTAGAATTTGAAACGCTTGCAGCCAGCCCTGGAGTGGAAAGCTCATTTTGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR CAA 90 bp CAGATGCAGTGTCTTTATGTTCCAAAAGTGTCCCCTGTCCCAGAATaGGTATTCCCATCACATTCTTCAGTTCAAGAGGTGCTATACCCC +
Preference number: 2 (lower is better)
Translates to: QMQCLYVPKVSPVPE*VFPSHSSVQEVLYP
Trigger: GGGGTATAGCACCTCTTGAACTGAAGAATGTGATGGGAATACCAATTCTGGGACAGGGGACACTTTTGGAACATAAAGACACTGCATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR-3UTR TCA 90 bp AACCTTTCCAGTTGTACGAACAGGTCTCTGGTGGTCTGGAAACAACTTCCTATAATGACCTATTGCCTTTaGGAGGAAGTAATGGGTCGG +
Preference number: 2 (lower is better)
Translates to: NLSSCTNRSLVVWKQLPIMTYCL*EEVMGR
Trigger: CCGACCCATTACTTCCTCTCAAAGGCAATAGGTCAT...TATAGGAAGTTGTTTCCAGACCACCAGAGACCTGTTCGTACAACTGGAAAGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR-3UTR TCA 90 bp CTCTATTATGTCTCCTGTGGAAAAGCCAAGACTACTGTCAAATGCCCGATTTATCAGGCTGTGCTAGCATaGCCTATTGCCTTTGAGAGG +
Preference number: 2 (lower is better)
Translates to: LYYVSCGKAKTTVKCPIYQAVLA*PIAFER
Trigger: CCTCTCAAAGGCAATAGGTCATGCTAGCACAGCCTG...ATAAATCGGGCATTTGACAGTAGTCTTGGCTTTTCCACAGGAGACATAATAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR-3UTR TCA 90 bp GAGAAGGTAAACAAAGACATATCTGTCATCAAACACCCACCCAATAGCATGAAGTGTAAAGAGGCAGCATaGAAGCCACAGTGCCCTGTG +
Preference number: 2 (lower is better)
Translates to: EKVNKDISVIKHPPNSMKCKEAA*KPQCPV
Trigger: CACAGGGCACTGTGGCTTTCATGCTGCCTCTTTACA...CTTCATGCTATTGGGTGGGTGTTTGATGACAGATATGTCTTTGTTTACCTTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR-3UTR CCA 90 bp GAGAAGGTAAACAAAGACATATCTGTCATCAAACACCCACCCAATAGCATGAAGCCTATGCCTACCAGCTaGCCACTGAACAATGGAAGG +
Preference number: 2 (lower is better)
Translates to: EKVNKDISVIKHPPNSMKPMPTS*PLNNGR
Trigger: CCTTCCATTGTTCAGTGGCCAGCTGGTAGGCATAGG...CTTCATGCTATTGGGTGGGTGTTTGATGACAGATATGTCTTTGTTTACCTTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR-3UTR TCA 90 bp AATAAATACAACCTTTCCAGTTGTACGAACAGGTCTCTGGTGGTCTGGAAACAACTTAAGTCCTTGTCATaGAGCCTCCAGCCTTCCTCA +
Preference number: 2 (lower is better)
Translates to: NKYNLSSCTNRSLVVWKQLKSLS*SLQPSS
Trigger: TGAGGAAGGCTGGAGGCTTCATGACAAGGACTTAAG...TTGTTTCCAGACCACCAGAGACCTGTTCGTACAACTGGAAAGGTTGTATTTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR-3UTR GCA 90 bp AGAAGAGTATCCTATGCCTACCAGCTGGCCACTGAACAATGGAAGGAACACTCTTTGACTTGGGACAGATaGAGTGTCTTTATGTTCCAA +
Preference number: 2 (lower is better)
Translates to: RRVSYAYQLATEQWKEHSLTWDR*SVFMFQ
Trigger: TTGGAACATAAAGACACTGCATCTGTCCCAAGTCAA...AGAGTGTTCCTTCCATTGTTCAGTGGCCAGCTGGTAGGCATAGGATACTCTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR-3UTR CCA 90 bp AGCATGAAGTGCTGTAGTTTCTTTATCCATCTTATAAGCCTGTTAGGGGAGCCACCCATTGCTGAGAAGTaGTTGCTGTTGATCTTGCCA +
Preference number: 2 (lower is better)
Translates to: SMKCCSFFIHLISLLGEPPIAEK*LLLILP
Trigger: TGGCAAGATCAACAGCAACCACTTCTCAGCAATGGG...TGGCTCCCCTAACAGGCTTATAAGATGGATAAAGAAACTACAGCACTTCATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR-3UTR CCA 90 bp AATAAATACAACCTTTCCAGTTGTACGAACAGGTCTCTGGTGGTCTGGAAACAATGGAAGCCTGGAGGTTaGGCATTTTTAATGCCCTCT +
Preference number: 2 (lower is better)
Translates to: NKYNLSSCTNRSLVVWKQWKPGG*AFLMPS
Trigger: AGAGGGCATTAAAAATGCCCAACCTCCAGGCTTCCA...TTGTTTCCAGACCACCAGAGACCTGTTCGTACAACTGGAAAGGTTGTATTTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR CAA 90 bp GAAAAGCCAAGACTACTGTCAAATGCCCGATTTATATTTTCCAGCTaGCTAACCTCAGAAAGGCAACAGCTTATGGCAATGGTAAAGCCA +
Preference number: 2 (lower is better)
Translates to: EKPRLLSNARFIFSS*LTSERQQLMAMVKP
Trigger: TGGCTTTACCATTGCCATAAGCTGTTGCCTTTCTGAGGTTAGCAAGCTGGAAAATATAAATCGGGCATTTGACAGTAGTCTTGGCTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR GCA 72 bp GCCCATGGCGGTGCAGTGATTGCCCTTGATTATACCTaGTGCTGTGGGGGAAGCAGATGTGGGCGTTTCTGG +
Preference number: 3 (lower is better)
Translates to: AHGGAVIALDYT*CCGGSRCGRFW
Trigger: CCAGAAACGCCCACATCTGCTTCCCCCACAGCAGCAGGTATAATCAAGGGCAATCACTGCACCGCCATGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR GCA 72 bp CTACCAAGCACGGTGGCATCTTGCAGGGCCAGACTTTaGAGGCTTATCAGTGTCCACATCCAGGCCCATAGC +
Preference number: 3 (lower is better)
Translates to: LPSTVASCRARL*RLISVHIQAHS
Trigger: GCTATGGGCCTGGATGTGGACACTGATAAGCCTGCAAAGTCTGGCCCTGCAAGATGCCACCGTGCTTGGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR CCA 72 bp CAAGTATTTGCTGTGGTTCAAGGATGGGAGACTGTGTaGGAGGGACCTAGGGAGGAGGTGGGTAGCAGCCCA +
Preference number: 3 (lower is better)
Translates to: QVFAVVQGWETV*EGPREEVGSSP
Trigger: TGGGCTGCTACCCACCTCCTCCCTAGGTCCCTCCCACACAGTCTCCCATCCTTGAACCACAGCAAATACTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR GCA 72 bp CATGGCGGTGCAGTGATTGCCCTTGATTATACCTGCTaGTGTGGGGGAAGCAGATGTGGGCGTTTCTGGCTT +
Preference number: 3 (lower is better)
Translates to: HGGAVIALDYTC*CGGSRCGRFWL
Trigger: AAGCCAGAAACGCCCACATCTGCTTCCCCCACAGCAGCAGGTATAATCAAGGGCAATCACTGCACCGCCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR CCA 72 bp ACCTGCTGCTGTGGGGGAAGCAGATGTGGGCGTTTCTaGCTTTTGCAGGAAGTGCTTTCAAGCAGTGCTGCT +
Preference number: 3 (lower is better)
Translates to: TCCCGGSRCGRF*LLQEVLSSSAA
Trigger: AGCAGCACTGCTTGAAAGCACTTCCTGCAAAAGCCAGAAACGCCCACATCTGCTTCCCCCACAGCAGCAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR TCA 72 bp GACCAGAGCTCACTAAGGGCAGGAGAGAAACATCTCTaGGTTAGTGGGACAGGCGACAAACAGTCCCCAGGA +
Preference number: 3 (lower is better)
Translates to: DQSSLRAGEKHL*VSGTGDKQSPG
Trigger: TCCTGGGGACTGTTTGTCGCCTGTCCCACTAACTCAGAGATGTTTCTCTCCTGCCCTTAGTGAGCTCTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR CCA 72 bp GTAACAGTTCCTTGCCCAAGCCACCAGCGAGCTTCCTaGATATCCTGGATGTTCTTGACCCAGCAGGCCAAA +
Preference number: 3 (lower is better)
Translates to: VTVPCPSHQRAS*ISWMFLTQQAK
Trigger: TTTGGCCTGCTGGGTCAAGAACATCCAGGATATCCAGGAAGCTCGCTGGTGGCTTGGGCAAGGAACTGTTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR CCA 72 bp GCCATTTTGCCCCAAGCCACCTGGTTATACCTAAGCTaGGTTTGCCTTGCTTCCGGATGTCCACCATTGGCA +
Preference number: 3 (lower is better)
Translates to: AILPQATWLYLS*VCLASGCPPLA
Trigger: TGCCAATGGTGGACATCCGGAAGCAAGGCAAACCCAGCTTAGGTATAACCAGGTGGCTTGGGGCAAAATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR CCA 72 bp TTACCAGTACCTCTGGCTTCCTGGAAGCCTGGAGGTTaGGCATTTTTAATGCCCTCTTGGTCCATCTGGGGC +
Preference number: 3 (lower is better)
Translates to: LPVPLASWKPGG*AFLMPSWSIWG
Trigger: GCCCCAGATGGACCAAGAGGGCATTAAAAATGCCCAACCTCCAGGCTTCCAGGAAGCCAGAGGTACTGGTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR TCA 72 bp ATCCTTCAACACAAGTGTGCCTGCTGCCACCTGAGTTaGGAAGGGACAACTCTGGGTCATGAGAGAGGCTTG +
Preference number: 3 (lower is better)
Translates to: ILQHKCACCHLS*EGTTLGHERGL
Trigger: CAAGCCTCTCTCATGACCCAGAGTTGTCCCTTCTCAACTCAGGTGGCAGCAGGCACACTTGTGTTGAAGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR GCA 72 bp GGAAGACAACTGATGGGAGAAAGAGTAACAGTTCCTTaGCCAAGCCACCAGCGAGCTTCCTGGATATCCTGG +
Preference number: 3 (lower is better)
Translates to: GRQLMGERVTVP*PSHQRASWISW
Trigger: CCAGGATATCCAGGAAGCTCGCTGGTGGCTTGGGCAAGGAACTGTTACTCTTTCTCCCATCAGTTGTCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR CCA 72 bp GTGGCTGTTACCAGTACCTCTGGCTTCCTGGAAGCCTaGAGGTTGGGCATTTTTAATGCCCTCTTGGTCCAT +
Preference number: 3 (lower is better)
Translates to: VAVTSTSGFLEA*RLGIFNALLVH
Trigger: ATGGACCAAGAGGGCATTAAAAATGCCCAACCTCCAGGCTTCCAGGAAGCCAGAGGTACTGGTAACAGCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR-3UTR CAA 90 bp GCAAGCGTTTCAAATTCTACCAGCGTCTCCCTGGGAAGGAGACTTAAGTCCTTGGAAAAGAGGTGTGACTaGAGGCAGGAGTGCCCCATG +
Preference number: 3 (lower is better)
Translates to: ASVSNSTSVSLGRRLKSLEKRCD*RQECPM
Trigger: CATGGGGCACTCCTGCCTCAAGTCACACCTCTTTTC...CAAGGACTTAAGTCTCCTTCCCAGGGAGACGCTGGTAGAATTTGAAACGCTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR-3UTR CAA 90 bp TTGCTAACCTCAGAAAGGCAACAGCTTATGGCAATGGTAAAGCCATCAGGGCATAAGCACGGTGGCATCTaGCAGGGCCAGACTTTGCAG +
Preference number: 3 (lower is better)
Translates to: LLTSERQQLMAMVKPSGHKHGGI*QGQTLQ
Trigger: CTGCAAAGTCTGGCCCTGCAAGATGCCACCGTGCTT...ATGCCCTGATGGCTTTACCATTGCCATAAGCTGTTGCCTTTCTGAGGTTAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR TCA 72 bp CATAACTGCCTGGGGTTCTTAGCACTAGCTCACCACTaGGGCAGGGTTAAGGAACCCAGAACAGACAAGTCA +
Preference number: 3 (lower is better)
Translates to: HNCLGFLALAHH*GRVKEPRTDKS
Trigger: TGACTTGTCTGTTCTGGGTTCCTTAACCCTGCCTCAGTGGTGAGCTAGTGCTAAGAACCCCAGGCAGTTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR CCA 72 bp ACAGTGCCCTGTGCTGAATCCAGAAACTGGTCACCCTaGCCACACTATGAAAATACCTCCAAGCTTGGGTCA +
Preference number: 3 (lower is better)
Translates to: TVPCAESRNWSP*PHYENTSKLGS
Trigger: TGACCCAAGCTTGGAGGTATTTTCATAGTGTGGCCAGGGTGACCAGTTTCTGGATTCAGCACAGGGCACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR CCA 72 bp TGGAAGCCTGGAGGTTGGGCATTTTTAATGCCCTCTTaGTCCATCTGGGGCCCAGAGAAGGTAAACAAAGAC +
Preference number: 3 (lower is better)
Translates to: WKPGGWAFLMPS*SIWGPEKVNKD
Trigger: GTCTTTGTTTACCTTCTCTGGGCCCCAGATGGACCAAGAGGGCATTAAAAATGCCCAACCTCCAGGCTTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR TCA 72 bp GGTCGGCCCTGGCTTCTCTTGGATCATGGCTTGTTCTaGGATCCACAAATGTTTAAGCACACTGCTGCATGT +
Preference number: 3 (lower is better)
Translates to: GRPWLLLDHGLF*DPQMFKHTAAC
Trigger: ACATGCAGCAGTGTGCTTAAACATTTGTGGATCTCAGAACAAGCCATGATCCAAGAGAAGCCAGGGCCGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR GCA 72 bp GCTGCCCATCGTGGATTCACATCATCAGCATCTTCTTaGCCCCAAACAGAGTCAAGGGATGTCCTAGAAGAT +
Preference number: 3 (lower is better)
Translates to: AAHRGFTSSASS*PQTESRDVLED
Trigger: ATCTTCTAGGACATCCCTTGACTCTGTTTGGGGGCAAGAAGATGCTGATGATGTGAATCCACGATGGGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR CCA 72 bp TGGGTCAGTTGGAATGGGGTCGGCCCTGGCTTCTCTTaGATCATGGCTTGTTCTGAGATCCACAAATGTTTA +
Preference number: 3 (lower is better)
Translates to: WVSWNGVGPGFS*IMACSEIHKCL
Trigger: TAAACATTTGTGGATCTCAGAACAAGCCATGATCCAAGAGAAGCCAGGGCCGACCCCATTCCAACTGACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR CCA 72 bp ATGAAAGCCACAGTGCCCTGTGCTGAATCCAGAAACTaGTCACCCTGGCCACACTATGAAAATACCTCCAAG +
Preference number: 3 (lower is better)
Translates to: MKATVPCAESRN*SPWPHYENTSK
Trigger: CTTGGAGGTATTTTCATAGTGTGGCCAGGGTGACCAGTTTCTGGATTCAGCACAGGGCACTGTGGCTTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR-3UTR CAA 90 bp GCAAGCGTTTCAAATTCTACCAGCGTCTCCCTGGGAAGGAGACTTAAGTCCTTGTCCCCTGTCCCAGAATaGGTATTCCCATCACATTCT +
Preference number: 3 (lower is better)
Translates to: ASVSNSTSVSLGRRLKSLSPVPE*VFPSHS
Trigger: AGAATGTGATGGGAATACCAATTCTGGGACAGGGGA...CAAGGACTTAAGTCTCCTTCCCAGGGAGACGCTGGTAGAATTTGAAACGCTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR-3UTR CAA 90 bp ATTCATCTCTATTATGTCTCCTGTGGAAAAGCCAAGACTACTGTCAAATGCCCGCTGCTGCCACCTGAGTaGAGAAGGGACAACTCTGGG +
Preference number: 3 (lower is better)
Translates to: IHLYYVSCGKAKTTVKCPLLPPE*RRDNSG
Trigger: CCCAGAGTTGTCCCTTCTCAACTCAGGTGGCAGCAG...CGGGCATTTGACAGTAGTCTTGGCTTTTCCACAGGAGACATAATAGAGATGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR-3UTR CAA 90 bp GCAAGCGTTTCAAATTCTACCAGCGTCTCCCTGGGAAGGAGACTTAAGTCCTTGATCATCAGCATCTTCTaGCCCCCAAACAGAGTCAAG +
Preference number: 3 (lower is better)
Translates to: ASVSNSTSVSLGRRLKSLIISIF*PPNRVK
Trigger: CTTGACTCTGTTTGGGGGCAAGAAGATGCTGATGAT...CAAGGACTTAAGTCTCCTTCCCAGGGAGACGCTGGTAGAATTTGAAACGCTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR TCA 72 bp AAGTGCTTTCAAGCAGTGCTGCTCCAGACCCATTGCTaGGAAGTGGTTGCTGTTGATCTTGCCAGAAAATGC +
Preference number: 3 (lower is better)
Translates to: KCFQAVLLQTHC*EVVAVDLARKC
Trigger: GCATTTTCTGGCAAGATCAACAGCAACCACTTCTCAGCAATGGGTCTGGAGCAGCACTGCTTGAAAGCACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR GCA 72 bp GAGCATCGAGTGTTAAAGGCCTTGACTTGGGACAGATaGAGTGTCTTTATGTTCCAAAAGTGTCCCCTGTCC +
Preference number: 3 (lower is better)
Translates to: EHRVLKALTWDR*SVFMFQKCPLS
Trigger: GGACAGGGGACACTTTTGGAACATAAAGACACTGCATCTGTCCCAAGTCAAGGCCTTTAACACTCGATGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR GCA 72 bp TGCAGAGTGATACCAGCCACACGACTCCATTGCCACTaGTACTCTCTAATCTTAACACTGAACCAAACCAGG +
Preference number: 3 (lower is better)
Translates to: CRVIPATRLHCH*YSLILTLNQTR
Trigger: CCTGGTTTGGTTCAGTGTTAAGATTAGAGAGTAGCAGTGGCAATGGAGTCGTGTGGCTGGTATCACTCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR CCA 72 bp GGAGGTTGGGCATTTTTAATGCCCTCTTGGTCCATCTaGGGCCCAGAGAAGGTAAACAAAGACATATCTGTC +
Preference number: 3 (lower is better)
Translates to: GGWAFLMPSWSI*GPEKVNKDISV
Trigger: GACAGATATGTCTTTGTTTACCTTCTCTGGGCCCCAGATGGACCAAGAGGGCATTAAAAATGCCCAACCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR CCA 72 bp CCTGGCAAGCCAGGCATGAGAGCATCTCCTCCCAAATaGTTACTATTGGACCCAGTTCAGATATCAACACAA +
Preference number: 3 (lower is better)
Translates to: PGKPGMRASPPK*LLLDPVQISTQ
Trigger: TTGTGTTGATATCTGAACTGGGTCCAATAGTAACCATTTGGGAGGAGATGCTCTCATGCCTGGCTTGCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR-3UTR CAA 90 bp TGGGCATTTTTAATGCCCTCTTGGTCCATCTGGGGCCCAGAGAAGGTAAACAAACTGATAAAGGTGTCATaGCAGAGTGATACCAGCCAC +
Preference number: 3 (lower is better)
Translates to: WAFLMPSWSIWGPEKVNKLIKVS*QSDTSH
Trigger: GTGGCTGGTATCACTCTGCAATGACACCTTTATCAG...TTTGTTTACCTTCTCTGGGCCCCAGATGGACCAAGAGGGCATTAAAAATGCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR-3UTR CAA 90 bp TGGGCATTTTTAATGCCCTCTTGGTCCATCTGGGGCCCAGAGAAGGTAAACAAAAAAATACCTCCAAGCTaGGGTCAGTTGGAATGGGGT +
Preference number: 3 (lower is better)
Translates to: WAFLMPSWSIWGPEKVNKKIPPS*GQLEWG
Trigger: ACCCCATTCCAACTGACCCAAGCTTGGAGGTATTTT...TTTGTTTACCTTCTCTGGGCCCCAGATGGACCAAGAGGGCATTAAAAATGCCCA
48% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR-3UTR CAA 90 bp GAGAGAAGAGTATCCTATGCCTACCAGCTGGCCACTGAACAATGGAAGGAACACACAAGTAACAAGTATTaGCTGTGGTTCAAGGATGGG +
Preference number: 3 (lower is better)
Translates to: ERRVSYAYQLATEQWKEHTSNKY*LWFKDG
Trigger: CCCATCCTTGAACCACAGCAAATACTTGTTACTTGT...GTGTTCCTTCCATTGTTCAGTGGCCAGCTGGTAGGCATAGGATACTCTTCTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR-3UTR CAA 90 bp TGGGCATTTTTAATGCCCTCTTGGTCCATCTGGGGCCCAGAGAAGGTAAACAAAATTGCTGAGAAGTGGTaGCTGTTGATCTTGCCAGAA +
Preference number: 3 (lower is better)
Translates to: WAFLMPSWSIWGPEKVNKIAEKW*LLILPE
Trigger: TTCTGGCAAGATCAACAGCAACCACTTCTCAGCAAT...TTTGTTTACCTTCTCTGGGCCCCAGATGGACCAAGAGGGCATTAAAAATGCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR-3UTR CAA 90 bp AGCATGAAGTGCTGTAGTTTCTTTATCCATCTTATAAGCCTGTTAGGGGAGCCAGGGCGTTTCTGGCTTTaGCAGGAAGTGCTTTCAAGC +
Preference number: 3 (lower is better)
Translates to: SMKCCSFFIHLISLLGEPGRFWL*QEVLSS
Trigger: GCTTGAAAGCACTTCCTGCAAAAGCCAGAAACGCCC...TGGCTCCCCTAACAGGCTTATAAGATGGATAAAGAAACTACAGCACTTCATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR CCA 72 bp AACCTTTCCAGTTGTACGAACAGGTCTCTGGTGGTCTaGAAACAACTTCCTATAAACTCTGCCTCAGCAGCA +
Preference number: 3 (lower is better)
Translates to: NLSSCTNRSLVV*KQLPINSASAA
Trigger: TGCTGCTGAGGCAGAGTTTATAGGAAGTTGTTTCCAGACCACCAGAGACCTGTTCGTACAACTGGAAAGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR-3UTR CAA 90 bp CTCTATTATGTCTCCTGTGGAAAAGCCAAGACTACTGTCAAATGCCCGATTTATCGAGTGTTAAAGGCCTaGACTTGGGACAGATGCAGT +
Preference number: 3 (lower is better)
Translates to: LYYVSCGKAKTTVKCPIYRVLKA*TWDRCS
Trigger: ACTGCATCTGTCCCAAGTCAAGGCCTTTAACACTCG...ATAAATCGGGCATTTGACAGTAGTCTTGGCTTTTCCACAGGAGACATAATAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR GCA 72 bp AGGGAGCTTATTGTTAAAACACAAGTAACAAGTATTTaGTGTGGTTCAAGGATGGGAGACTGTGTGGGAGGG +
Preference number: 3 (lower is better)
Translates to: RELIVKTQVTSI*CGSRMGDCVGG
Trigger: CCCTCCCACACAGTCTCCCATCCTTGAACCACAGCAAATACTTGTTACTTGTGTTTTAACAATAAGCTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR CCA 72 bp GTCTTTATGTTCCAAAAGTGTCCCCTGTCCCAGAATTaGTATTCCCATCACATTCTTCAGTTCAAGAGGTGC +
Preference number: 3 (lower is better)
Translates to: VFMFQKCPLSQN*YSHHILQFKRC
Trigger: GCACCTCTTGAACTGAAGAATGTGATGGGAATACCAATTCTGGGACAGGGGACACTTTTGGAACATAAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR CCA 72 bp CTTGCTTCCCAAGAGTATGTAGGAAAGCTTTCATTGTaGATTTATTTGCATGATAGCCCAGTGGGCAAGAAG +
Preference number: 3 (lower is better)
Translates to: LASQEYVGKLSL*IYLHDSPVGKK
Trigger: CTTCTTGCCCACTGGGCTATCATGCAAATAAATCCACAATGAAAGCTTTCCTACATACTCTTGGGAAGCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR-3UTR CAA 90 bp GAGAAGGTAAACAAAGACATATCTGTCATCAAACACCCACCCAATAGCATGAAGTCATTGTGGATTTATTaGCATGATAGCCCAGTGGGC +
Preference number: 3 (lower is better)
Translates to: EKVNKDISVIKHPPNSMKSLWIY*HDSPVG
Trigger: GCCCACTGGGCTATCATGCAAATAAATCCACAATGA...CTTCATGCTATTGGGTGGGTGTTTGATGACAGATATGTCTTTGTTTACCTTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR GCA 72 bp TATGTCTCCTGTGGAAAAGCCAAGACTACTGTCAAATaGCCGATTTATATTTTCCAGCTTGCTAACCTCAGA +
Preference number: 3 (lower is better)
Translates to: YVSCGKAKTTVK*PIYIFQLANLR
Trigger: TCTGAGGTTAGCAAGCTGGAAAATATAAATCGGGCATTTGACAGTAGTCTTGGCTTTTCCACAGGAGACATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
CDS-3UTR TCA 90 bp TGGGCATTTTTAATGCCCTCTTGGTCCATCTGGGGCCCAGAGAAGGTAAACAAACGCGGGCGGAGGTGGTaGGAGCCAGCGCCGCGAAGC +
Preference number: 4 (lower is better)
Translates to: WAFLMPSWSIWGPEKVNKRGRRW*EPAPRS
Trigger: GCTTCGCGGCGCTGGCTCTCACCACCTCCGCCCGCG...TTTGTTTACCTTCTCTGGGCCCCAGATGGACCAAGAGGGCATTAAAAATGCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
CDS-3UTR GCA 90 bp TCTGGTGGTCTGGAAACAACTTCCTATAAACTCTGCCTCAGCAGCAGCTGTGGGCATCCGAGCGCCATCTaGGTGGCCCCGAGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: SGGLETTSYKLCLSSSCGHPSAI*VAPRAS
Trigger: GCTGGCTCTCGGGGCCACGCAGATGGCGCTCGGATG...CCCACAGCTGCTGCTGAGGCAGAGTTTATAGGAAGTTGTTTCCAGACCACCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
CDS-3UTR TCA 90 bp ACCAGGCACAGAGGAGCATCGAGTGTTAAAGGCCTTGACTTGGGACAGATGCAGAGCTCACGGCCACGATaGGGCATCCGAGCGCCATCT +
Preference number: 4 (lower is better)
Translates to: TRHRGASSVKGLDLGQMQSSRPR*GIRAPS
Trigger: AGATGGCGCTCGGATGCCTCATCGTGGCCGTGAGCT...CTGCATCTGTCCCAAGTCAAGGCCTTTAACACTCGATGCTCCTCTGTGCCTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
CDS-3UTR TCA 90 bp TCTAGTGGCTGTTACCAGTACCTCTGGCTTCCTGGAAGCCTGGAGGTTGGGCATTGGGTCACCAGTGGATaGGTGCTGGTGCTGACAGGC +
Preference number: 4 (lower is better)
Translates to: SSGCYQYLWLPGSLEVGHWVTSG*VLVLTG
Trigger: GCCTGTCAGCACCAGCACTCATCCACTGGTGACCCA...ATGCCCAACCTCCAGGCTTCCAGGAAGCCAGAGGTACTGGTAACAGCCACTAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
CDS-3UTR GCA 90 bp GCAAGCGTTTCAAATTCTACCAGCGTCTCCCTGGGAAGGAGACTTAAGTCCTTGCGAGAGCCAGCACGATaGGGGAACGGCCCGGGCACT +
Preference number: 4 (lower is better)
Translates to: ASVSNSTSVSLGRRLKSLREPAR*GNGPGT
Trigger: AGTGCCCGGGCCGTTCCCGCATCGTGCTGGCTCTCG...CAAGGACTTAAGTCTCCTTCCCAGGGAGACGCTGGTAGAATTTGAAACGCTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
CDS-3UTR GCA 90 bp TACCAAGCACGGTGGCATCTTGCAGGGCCAGACTTTGCAGGCTTATCAGTGTCCGTGTCTCCCCGAGGTTaGTGCATCCGGATGAGTGGT +
Preference number: 4 (lower is better)
Translates to: YQARWHLAGPDFAGLSVSVSPRG*CIRMSG
Trigger: ACCACTCATCCGGATGCAGCAACCTCGGGGAGACAC...GGACACTGATAAGCCTGCAAAGTCTGGCCCTGCAAGATGCCACCGTGCTTGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
CDS-3UTR CCA 90 bp ACAGAGGAGCATCGAGTGTTAAAGGCCTTGACTTGGGACAGATGCAGTGTCTTTTGGCCTCCTCCACCCTaGGCTCCTCCGAGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: TEEHRVLKALTWDRCSVFWPPPP*APPRWP
Trigger: TGGCCACCTCGGAGGAGCCCAGGGTGGAGGAGGCCA...AAAGACACTGCATCTGTCCCAAGTCAAGGCCTTTAACACTCGATGCTCCTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
CDS-3UTR GCA 90 bp TCTAGTGGCTGTTACCAGTACCTCTGGCTTCCTGGAAGCCTGGAGGTTGGGCATTCTCCCCGAGGTTGCTaGATCCGGATGAGTGGTGTT +
Preference number: 4 (lower is better)
Translates to: SSGCYQYLWLPGSLEVGHSPRGC*IRMSGV
Trigger: AACACCACTCATCCGGATGCAGCAACCTCGGGGAGA...ATGCCCAACCTCCAGGCTTCCAGGAAGCCAGAGGTACTGGTAACAGCCACTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
CDS-3UTR GCA 90 bp TACCAAGCACGGTGGCATCTTGCAGGGCCAGACTTTGCAGGCTTATCAGTGTCCTTGGGGTGTCTAAAGTaGCATCAGGGGATGGGTGGC +
Preference number: 4 (lower is better)
Translates to: YQARWHLAGPDFAGLSVSLGCLK*HQGMGG
Trigger: GCCACCCATCCCCTGATGGCACTTTAGACACCCCAA...GGACACTGATAAGCCTGCAAAGTCTGGCCCTGCAAGATGCCACCGTGCTTGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
CDS-3UTR GCA 90 bp TACCAAGCACGGTGGCATCTTGCAGGGCCAGACTTTGCAGGCTTATCAGTGTCCCAGAACCCTGGTGTCTaGATAGGCCTTGCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: YQARWHLAGPDFAGLSVSQNPGV*IGLALH
Trigger: GTGGAGAGCAAGGCCTATGCAGACACCAGGGTTCTG...GGACACTGATAAGCCTGCAAAGTCTGGCCCTGCAAGATGCCACCGTGCTTGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
CDS-3UTR CCA 90 bp GCAAGCGTTTCAAATTCTACCAGCGTCTCCCTGGGAAGGAGACTTAAGTCCTTGCCATCAGGGGATGGGTaGCTTGGGCCCAGTGAGGTG +
Preference number: 4 (lower is better)
Translates to: ASVSNSTSVSLGRRLKSLPSGDG*LGPSEV
Trigger: CACCTCACTGGGCCCAAGCCACCCATCCCCTGATGG...CAAGGACTTAAGTCTCCTTCCCAGGGAGACGCTGGTAGAATTTGAAACGCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR CAA 72 bp AGCCACCAGCGAGCTTCCTGGATATCCTGGATGTTCTaGACCCAGCAGGCCAAAGGCCTTTCTCTACCAAGC +
Preference number: 4 (lower is better)
Translates to: SHQRASWISWMF*TQQAKGLSLPS
Trigger: GCTTGGTAGAGAAAGGCCTTTGGCCTGCTGGGTCAAGAACATCCAGGATATCCAGGAAGCTCGCTGGTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR CAA 72 bp TGCTGTGGGGGAAGCAGATGTGGGCGTTTCTGGCTTTaGCAGGAAGTGCTTTCAAGCAGTGCTGCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: CCGGSRCGRFWL*QEVLSSSAAPD
Trigger: GTCTGGAGCAGCACTGCTTGAAAGCACTTCCTGCAAAAGCCAGAAACGCCCACATCTGCTTCCCCCACAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
CDS-3UTR CCA 90 bp TGGGCATTTTTAATGCCCTCTTGGTCCATCTGGGGCCCAGAGAAGGTAAACAAAGAGGCAAAGTCCAGGTaGAGACCCCTGTGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: WAFLMPSWSIWGPEKVNKEAKSR*RPLWAS
Trigger: GGAGGCCCACAGGGGTCTCCACCTGGACTTTGCCTC...TTTGTTTACCTTCTCTGGGCCCCAGATGGACCAAGAGGGCATTAAAAATGCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR CAA 72 bp GTTACCAGTACCTCTGGCTTCCTGGAAGCCTGGAGGTaGGGCATTTTTAATGCCCTCTTGGTCCATCTGGGG +
Preference number: 4 (lower is better)
Translates to: VTSTSGFLEAWR*GIFNALLVHLG
Trigger: CCCCAGATGGACCAAGAGGGCATTAAAAATGCCCAACCTCCAGGCTTCCAGGAAGCCAGAGGTACTGGTAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
CDS-3UTR GCA 90 bp AGAAGAGTATCCTATGCCTACCAGCTGGCCACTGAACAATGGAAGGAACACTCTGCTTGGTTGTGCCTGTaGGCTCAAGCTGGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: RRVSYAYQLATEQWKEHSAWLCL*AQAGCL
Trigger: GAGGCAGCCAGCTTGAGCGCACAGGCACAACCAAGC...AGAGTGTTCCTTCCATTGTTCAGTGGCCAGCTGGTAGGCATAGGATACTCTTCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
CDS-3UTR GCA 90 bp TTGCTAACCTCAGAAAGGCAACAGCTTATGGCAATGGTAAAGCCATCAGGGCATCCCTGGGCTTGGTTGTaGCTGTGCGCTCAAGCTGGC +
Preference number: 4 (lower is better)
Translates to: LLTSERQQLMAMVKPSGHPWAWL*LCAQAG
Trigger: GCCAGCTTGAGCGCACAGGCACAACCAAGCCCAGGG...ATGCCCTGATGGCTTTACCATTGCCATAAGCTGTTGCCTTTCTGAGGTTAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
CDS-3UTR CCA 90 bp GAGAGAAGAGTATCCTATGCCTACCAGCTGGCCACTGAACAATGGAAGGAACACGAGTCTGGTGGAGAATaGTGCCGTGGGGAGTCACAC +
Preference number: 4 (lower is better)
Translates to: ERRVSYAYQLATEQWKEHESGGE*CRGESH
Trigger: GTGTGACTCCCCACGGCACCATTCTCCACCAGACTC...GTGTTCCTTCCATTGTTCAGTGGCCAGCTGGTAGGCATAGGATACTCTTCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
CDS-3UTR CCA 90 bp TCTGGTGGTCTGGAAACAACTTCCTATAAACTCTGCCTCAGCAGCAGCTGTGGGAAGTCCAGAGTCTGGTaGAGAATGGTGCCGTGGGGA +
Preference number: 4 (lower is better)
Translates to: SGGLETTSYKLCLSSSCGKSRVW*RMVPWG
Trigger: TCCCCACGGCACCATTCTCCACCAGACTCTGGACTT...CCCACAGCTGCTGCTGAGGCAGAGTTTATAGGAAGTTGTTTCCAGACCACCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
CDS-3UTR CCA 90 bp CCAGGAAGACAACTGATGGGAGAAAGAGTAACAGTTCCTTGCCCAAGCCACCAGGTAAGGTCTCTGGCTTaGTCCCTTGGCCCGTTTTCC +
Preference number: 4 (lower is better)
Translates to: PGRQLMGERVTVPCPSHQVRSLA*SLGPFS
Trigger: GGAAAACGGGCCAAGGGACCAAGCCAGAGACCTTAC...CTGGTGGCTTGGGCAAGGAACTGTTACTCTTTCTCCCATCAGTTGTCTTCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
CDS-3UTR CCA 90 bp GAGAAGGTAAACAAAGACATATCTGTCATCAAACACCCACCCAATAGCATGAAGCGAGCGCCATCTGCGTaGCCCCGAGAGCCAGCACGA +
Preference number: 4 (lower is better)
Translates to: EKVNKDISVIKHPPNSMKRAPSA*PREPAR
Trigger: TCGTGCTGGCTCTCGGGGCCACGCAGATGGCGCTCG...CTTCATGCTATTGGGTGGGTGTTTGATGACAGATATGTCTTTGTTTACCTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
CDS-3UTR CCA 90 bp GCAAGCGTTTCAAATTCTACCAGCGTCTCCCTGGGAAGGAGACTTAAGTCCTTGTCTGCATGCAGCACATaGCTGTGGCCAAGGCACACA +
Preference number: 4 (lower is better)
Translates to: ASVSNSTSVSLGRRLKSLSACST*LWPRHT
Trigger: TGTGTGCCTTGGCCACAGCCATGTGCTGCATGCAGA...CAAGGACTTAAGTCTCCTTCCCAGGGAGACGCTGGTAGAATTTGAAACGCTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
CDS-3UTR CCA 90 bp AGAAGAGTATCCTATGCCTACCAGCTGGCCACTGAACAATGGAAGGAACACTCTCCTGTGCGCTCAAGCTaGCTGCCTCTGGAGACATGT +
Preference number: 4 (lower is better)
Translates to: RRVSYAYQLATEQWKEHSPVRSS*LPLETC
Trigger: ACATGTCTCCAGAGGCAGCCAGCTTGAGCGCACAGG...AGAGTGTTCCTTCCATTGTTCAGTGGCCAGCTGGTAGGCATAGGATACTCTTCT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
CDS-3UTR CCA 90 bp TTGCTAACCTCAGAAAGGCAACAGCTTATGGCAATGGTAAAGCCATCAGGGCATCACACGCCCTGGGCTTaGTTGTGCCTGTGCGCTCAA +
Preference number: 4 (lower is better)
Translates to: LLTSERQQLMAMVKPSGHHTPWA*LCLCAQ
Trigger: TTGAGCGCACAGGCACAACCAAGCCCAGGGCGTGTG...ATGCCCTGATGGCTTTACCATTGCCATAAGCTGTTGCCTTTCTGAGGTTAGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
CDS-3UTR TCA 90 bp AGAAGAGTATCCTATGCCTACCAGCTGGCCACTGAACAATGGAAGGAACACTCTGTTGCTGCATCCGGATaGGTGGTGTTGCAGCTCACA +
Preference number: 4 (lower is better)
Translates to: RRVSYAYQLATEQWKEHSVAASG*VVLQLT
Trigger: TGTGAGCTGCAACACCACTCATCCGGATGCAGCAAC...AGAGTGTTCCTTCCATTGTTCAGTGGCCAGCTGGTAGGCATAGGATACTCTTCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
CDS-3UTR TCA 90 bp TGGGCATTTTTAATGCCCTCTTGGTCCATCTGGGGCCCAGAGAAGGTAAACAAAAGCCATGGCTGGCTGTaGTGTGGAGACTGCTTCACT +
Preference number: 4 (lower is better)
Translates to: WAFLMPSWSIWGPEKVNKSHGWL*CGDCFT
Trigger: AGTGAAGCAGTCTCCACATCACAGCCAGCCATGGCT...TTTGTTTACCTTCTCTGGGCCCCAGATGGACCAAGAGGGCATTAAAAATGCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
CDS-3UTR TCA 90 bp AGCATGAAGTGCTGTAGTTTCTTTATCCATCTTATAAGCCTGTTAGGGGAGCCAGATGAGTGCTGGTGCTaGCAGGCAGCCATGGCTGGC +
Preference number: 4 (lower is better)
Translates to: SMKCCSFFIHLISLLGEPDECWC*QAAMAG
Trigger: GCCAGCCATGGCTGCCTGTCAGCACCAGCACTCATC...TGGCTCCCCTAACAGGCTTATAAGATGGATAAAGAAACTACAGCACTTCATGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
CDS-3UTR CCA 90 bp TCTGGTGGTCTGGAAACAACTTCCTATAAACTCTGCCTCAGCAGCAGCTGTGGGGGAGTGAGACCTATGTaGGAAGAACATCTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: SGGLETTSYKLCLSSSCGGVRPM*EEHLQD
Trigger: GTCCTGCAGATGTTCTTCCCACATAGGTCTCACTCC...CCCACAGCTGCTGCTGAGGCAGAGTTTATAGGAAGTTGTTTCCAGACCACCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
CDS-3UTR CCA 90 bp ACCCAAAATGAGCTTTCCACTCCAGGGCTGGCTGCAAGCGTTTCAAATTCTACCTCAAAGTCCAGAGTCTaGTGGAGAATGGTGCCGTGG +
Preference number: 4 (lower is better)
Translates to: TQNELSTPGLAASVSNSTSKSRV*WRMVPW
Trigger: CCACGGCACCATTCTCCACCAGACTCTGGACTTTGA...GGTAGAATTTGAAACGCTTGCAGCCAGCCCTGGAGTGGAAAGCTCATTTTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR CAA 72 bp AGGAAGACAACTGATGGGAGAAAGAGTAACAGTTCCTaGCCCAAGCCACCAGCGAGCTTCCTGGATATCCTG +
Preference number: 4 (lower is better)
Translates to: RKTTDGRKSNSS*PKPPASFLDIL
Trigger: CAGGATATCCAGGAAGCTCGCTGGTGGCTTGGGCAAGGAACTGTTACTCTTTCTCCCATCAGTTGTCTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR CAA 72 bp CTGGAAGCCTGGAGGTTGGGCATTTTTAATGCCCTCTaGGTCCATCTGGGGCCCAGAGAAGGTAAACAAAGA +
Preference number: 4 (lower is better)
Translates to: LEAWRLGIFNAL*VHLGPREGKQR
Trigger: TCTTTGTTTACCTTCTCTGGGCCCCAGATGGACCAAGAGGGCATTAAAAATGCCCAACCTCCAGGCTTCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
CDS-3UTR GCA 90 bp AGAAGAGTATCCTATGCCTACCAGCTGGCCACTGAACAATGGAAGGAACACTCTCCGGATGAGTGGTGTTaGAGCTCACAGCATACACAC +
Preference number: 4 (lower is better)
Translates to: RRVSYAYQLATEQWKEHSPDEWC*SSQHTH
Trigger: GTGTGTATGCTGTGAGCTGCAACACCACTCATCCGG...AGAGTGTTCCTTCCATTGTTCAGTGGCCAGCTGGTAGGCATAGGATACTCTTCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
CDS-3UTR GCA 90 bp TTGCTAACCTCAGAAAGGCAACAGCTTATGGCAATGGTAAAGCCATCAGGGCATCAGAGACCATCTGCATaGAGCACATGGCTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: LLTSERQQLMAMVKPSGHQRPSA*STWLWP
Trigger: TGGCCACAGCCATGTGCTGCATGCAGATGGTCTCTG...ATGCCCTGATGGCTTTACCATTGCCATAAGCTGTTGCCTTTCTGAGGTTAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
CDS-3UTR GCA 90 bp AACCTTTCCAGTTGTACGAACAGGTCTCTGGTGGTCTGGAAACAACTTCCTATATCTGGTGGAGAATGGTaGCGTGGGGAGTCACACAGG +
Preference number: 4 (lower is better)
Translates to: NLSSCTNRSLVVWKQLPISGGEW*RGESHR
Trigger: CCTGTGTGACTCCCCACGGCACCATTCTCCACCAGA...TATAGGAAGTTGTTTCCAGACCACCAGAGACCTGTTCGTACAACTGGAAAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
CDS-3UTR GCA 90 bp TCTTGGTCCATCTGGGGCCCAGAGAAGGTAAACAAAGACATATCTGTCATCAAATGCGCTCAAGCTGGCTaGCTCTGGAGACATGTGGTG +
Preference number: 4 (lower is better)
Translates to: SWSIWGPEKVNKDISVIKCAQAG*LWRHVV
Trigger: CACCACATGTCTCCAGAGGCAGCCAGCTTGAGCGCA...TTTGATGACAGATATGTCTTTGTTTACCTTCTCTGGGCCCCAGATGGACCAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
CDS-3UTR CCA 90 bp AGAAGAGTATCCTATGCCTACCAGCTGGCCACTGAACAATGGAAGGAACACTCTCTGCATCCGGATGAGTaGTGTTGCAGCTCACAGCAT +
Preference number: 4 (lower is better)
Translates to: RRVSYAYQLATEQWKEHSLHPDE*CCSSQH
Trigger: ATGCTGTGAGCTGCAACACCACTCATCCGGATGCAG...AGAGTGTTCCTTCCATTGTTCAGTGGCCAGCTGGTAGGCATAGGATACTCTTCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
CDS-3UTR CCA 90 bp AACCTTTCCAGTTGTACGAACAGGTCTCTGGTGGTCTGGAAACAACTTCCTATATGTGGGCCTCCGCTGTaGGTGTACAGGTGTACTCTG +
Preference number: 4 (lower is better)
Translates to: NLSSCTNRSLVVWKQLPICGPPL*VYRCTL
Trigger: CAGAGTACACCTGTACACCCACAGCGGAGGCCCACA...TATAGGAAGTTGTTTCCAGACCACCAGAGACCTGTTCGTACAACTGGAAAGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
CDS-3UTR CCA 90 bp TCTTGGTCCATCTGGGGCCCAGAGAAGGTAAACAAAGACATATCTGTCATCAAACAAGCTGGCTGCCTCTaGAGACATGTGGTGAGGGAC +
Preference number: 4 (lower is better)
Translates to: SWSIWGPEKVNKDISVIKQAGCL*RHVVRD
Trigger: GTCCCTCACCACATGTCTCCAGAGGCAGCCAGCTTG...TTTGATGACAGATATGTCTTTGTTTACCTTCTCTGGGCCCCAGATGGACCAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR CAA 72 bp CAACACAAGCAGGGACAGACCTTCCAAGATGGAAGGTaGTGCAGGCAATGTGAAGAAAGACGGCTTTGCTTC +
Preference number: 4 (lower is better)
Translates to: QHKQGQTFQDGR*CRQCEERRLCF
Trigger: GAAGCAAAGCCGTCTTTCTTCACATTGCCTGCACAACCTTCCATCTTGGAAGGTCTGTCCCTGCTTGTGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR CAA 72 bp TGCTGCCCATCGTGGATTCACATCATCAGCATCTTCTaGCCCCCAAACAGAGTCAAGGGATGTCCTAGAAGA +
Preference number: 4 (lower is better)
Translates to: CCPSWIHIISIF*PPNRVKGCPRR
Trigger: TCTTCTAGGACATCCCTTGACTCTGTTTGGGGGCAAGAAGATGCTGATGATGTGAATCCACGATGGGCAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
CDS-3UTR CCA 90 bp TATATTTTCCAGCTTGCTAACCTCAGAAAGGCAACAGCTTATGGCAATGGTAAAACGAGCTGGGCGTTCTaGCAGGAGAGGATGGAGCCG +
Preference number: 4 (lower is better)
Translates to: YIFQLANLRKATAYGNGKTSWAF*QERMEP
Trigger: CGGCTCCATCCTCTCCTGCCAGAACGCCCAGCTCGT...TTTACCATTGCCATAAGCTGTTGCCTTTCTGAGGTTAGCAAGCTGGAAAATATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
CDS-3UTR CCA 90 bp AACCTTTCCAGTTGTACGAACAGGTCTCTGGTGGTCTGGAAACAACTTCCTATATGCAGCACATGGCTGTaGCCAAGGCACACACAATGG +
Preference number: 4 (lower is better)
Translates to: NLSSCTNRSLVVWKQLPICSTWL*PRHTQW
Trigger: CCATTGTGTGTGCCTTGGCCACAGCCATGTGCTGCA...TATAGGAAGTTGTTTCCAGACCACCAGAGACCTGTTCGTACAACTGGAAAGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR CAA 72 bp CCAGGCATGAGAGCATCTCCTCCCAAATGGTTACTATaGGACCCAGTTCAGATATCAACACAAGCAGGGACA +
Preference number: 4 (lower is better)
Translates to: PGMRASPPKWLL*DPVQISTQAGT
Trigger: TGTCCCTGCTTGTGTTGATATCTGAACTGGGTCCAATAGTAACCATTTGGGAGGAGATGCTCTCATGCCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
CDS-3UTR TCA 90 bp AACCTTTCCAGTTGTACGAACAGGTCTCTGGTGGTCTGGAAACAACTTCCTATATCTGGAGACATGTGGTaGGGGACTGGAGTGGGTATA +
Preference number: 4 (lower is better)
Translates to: NLSSCTNRSLVVWKQLPISGDMW*GTGVGI
Trigger: TATACCCACTCCAGTCCCTCACCACATGTCTCCAGA...TATAGGAAGTTGTTTCCAGACCACCAGAGACCTGTTCGTACAACTGGAAAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
CDS-3UTR CCA 90 bp AATAAATACAACCTTTCCAGTTGTACGAACAGGTCTCTGGTGGTCTGGAAACAAGCTGACAGGCAGCCATaGCTGGCTGTGATGTGGAGA +
Preference number: 4 (lower is better)
Translates to: NKYNLSSCTNRSLVVWKQADRQP*LAVMWR
Trigger: TCTCCACATCACAGCCAGCCATGGCTGCCTGTCAGC...TTGTTTCCAGACCACCAGAGACCTGTTCGTACAACTGGAAAGGTTGTATTTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
CDS-3UTR GCA 90 bp TCTTGGTCCATCTGGGGCCCAGAGAAGGTAAACAAAGACATATCTGTCATCAAATGTGGGAAGAACATCTaGAGGACATCAGCAGAGACC +
Preference number: 4 (lower is better)
Translates to: SWSIWGPEKVNKDISVIKCGKNI*RTSAET
Trigger: GGTCTCTGCTGATGTCCTGCAGATGTTCTTCCCACA...TTTGATGACAGATATGTCTTTGTTTACCTTCTCTGGGCCCCAGATGGACCAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
CDS-3UTR CCA 90 bp CTCTATTATGTCTCCTGTGGAAAAGCCAAGACTACTGTCAAATGCCCGATTTATTTGGGTCCCCAGAGCTaGAGTCAACCACCTGGTGAT +
Preference number: 4 (lower is better)
Translates to: LYYVSCGKAKTTVKCPIYLGPQS*SQPPGD
Trigger: ATCACCAGGTGGTTGACTCCAGCTCTGGGGACCCAA...ATAAATCGGGCATTTGACAGTAGTCTTGGCTTTTCCACAGGAGACATAATAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR CAA 72 bp AAACCAGGCACAGAGGAGCATCGAGTGTTAAAGGCCTaGACTTGGGACAGATGCAGTGTCTTTATGTTCCAA +
Preference number: 4 (lower is better)
Translates to: KPGTEEHRVLKA*TWDRCSVFMFQ
Trigger: TTGGAACATAAAGACACTGCATCTGTCCCAAGTCAAGGCCTTTAACACTCGATGCTCCTCTGTGCCTGGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR CAA 72 bp AGGAACCCAGAACAGACAAGTCAAATTGCAAGACTGTaGTCTAGTGGCTGTTACCAGTACCTCTGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: RNPEQTSQIARL*SSGCYQYLWLP
Trigger: AGGAAGCCAGAGGTACTGGTAACAGCCACTAGACAACAGTCTTGCAATTTGACTTGTCTGTTCTGGGTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
CDS-3UTR CCA 90 bp TATATTTTCCAGCTTGCTAACCTCAGAAAGGCAACAGCTTATGGCAATGGTAAACATGTGGTGAGGGACTaGAGTGGGTATAAGGGGCGT +
Preference number: 4 (lower is better)
Translates to: YIFQLANLRKATAYGNGKHVVRD*SGYKGR
Trigger: ACGCCCCTTATACCCACTCCAGTCCCTCACCACATG...TTTACCATTGCCATAAGCTGTTGCCTTTCTGAGGTTAGCAAGCTGGAAAATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR CAA 72 bp CAAGAGTATGTAGGAAAGCTTTCATTGTGGATTTATTaGCATGATAGCCCAGTGGGCAAGAAGGTGGTCCCA +
Preference number: 4 (lower is better)
Translates to: QEYVGKLSLWIY*HDSPVGKKVVP
Trigger: TGGGACCACCTTCTTGCCCACTGGGCTATCATGCAAATAAATCCACAATGAAAGCTTTCCTACATACTCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR CAA 72 bp GTGCTTGCTTCCCAAGAGTATGTAGGAAAGCTTTCATaGTGGATTTATTTGCATGATAGCCCAGTGGGCAAG +
Preference number: 4 (lower is better)
Translates to: VLASQEYVGKLS*WIYLHDSPVGK
Trigger: CTTGCCCACTGGGCTATCATGCAAATAAATCCACAATGAAAGCTTTCCTACATACTCTTGGGAAGCAAGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
CDS-3UTR GCA 90 bp TATATTTTCCAGCTTGCTAACCTCAGAAAGGCAACAGCTTATGGCAATGGTAAAAGGGAGGCTGCAGTGTaGGTGTTCCAAAAACTTAGC +
Preference number: 4 (lower is better)
Translates to: YIFQLANLRKATAYGNGKREAAV*VFQKLS
Trigger: GCTAAGTTTTTGGAACACGCACACTGCAGCCTCCCT...TTTACCATTGCCATAAGCTGTTGCCTTTCTGAGGTTAGCAAGCTGGAAAATATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
3UTR CAA 72 bp AGACTACTGTCAAATGCCCGATTTATATTTTCCAGCTaGCTAACCTCAGAAAGGCAACAGCTTATGGCAATG +
Preference number: 4 (lower is better)
Translates to: RLLSNARFIFSS*LTSERQQLMAM
Trigger: CATTGCCATAAGCTGTTGCCTTTCTGAGGTTAGCAAGCTGGAAAATATAAATCGGGCATTTGACAGTAGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
CDS GCA 90 bp AGCGCCGCGAAGCTCACGGCCACGATGAGGCATCCGAGCGCCATCTaGGTGGCCCCGAGAGCCAGCACGATGCGGGAACGGCCCGGGCAC +
Preference number: 5 (lower is better)
Translates to: SAAKLTATMRHPSAI*VAPRASTMRERPGH
Trigger: GTGCCCGGGCCGTTCCCGCATCGTGCTGGCTCTCGGGGCCACGCAGATGGCGCTCGGATGCCTCATCGTGGCCGTGAGCTTCGCGGCGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000119118.8
ENSMUST00000148459.3
CDS TCA 90 bp ACCAAAGATGGCCTCCTCCACCCTGGGCTCCTCCGAGGTGGCCATTaGTCGTATGGTGCCCACCACATGTCGCACCTCTGTAGGGAGGCT +
Preference number: 5 (lower is better)
Translates to: TKDGLLHPGLLRGGH*SYGAHHMSHLCREA
Trigger: AGCCTCCCTACAGAGGTGCGACATGTGGTGGGCACCATACGATCAATGGCCACCTCGGAGGAGCCCAGGGTGGAGGAGGCCATCTTTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
CDS CCA 90 bp CTGTCGAACTTGATCAACTGGCAGCCTTCGAGGGAGCTGACGAGCTaGGCGTTCTGGCAGGAGAGGATGGAGCCGGCCAGGTTGAGCATC +
Preference number: 5 (lower is better)
Translates to: LSNLINWQPSRELTS*AFWQERMEPARLSI
Trigger: GATGCTCAACCTGGCCGGCTCCATCCTCTCCTGCCAGAACGCCCAGCTCGTCAGCTCCCTCGAAGGCTGCCAGTTGATCAAGTTCGACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000119118.8
ENSMUST00000149851.8
CDS CCA 90 bp CAGGATGCCAGGGCTGTTGATGGCAACATCATACAGAGTGCTGAATaGCGAGGAGGCAAAGTCCAGGTGGAGACCCCTGTGGGCCTCCGC +
Preference number: 5 (lower is better)
Translates to: QDARAVDGNIIQSAE*RGGKVQVETPVGLR
Trigger: GCGGAGGCCCACAGGGGTCTCCACCTGGACTTTGCCTCCTCGCCATTCAGCACTCTGTATGATGTTGCCATCAACAGCCCTGGCATCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000119118.8
ENSMUST00000149851.8
CDS-3UTR CAA 90 bp TCTAGTGGCTGTTACCAGTACCTCTGGCTTCCTGGAAGCCTGGAGGTTGGGCATCCACACGCCCTGGGCTaGGTTGTGCCTGTGCGCTCA +
Preference number: 5 (lower is better)
Translates to: SSGCYQYLWLPGSLEVGHPHALG*VVPVRS
Trigger: TGAGCGCACAGGCACAACCAAGCCCAGGGCGTGTGG...ATGCCCAACCTCCAGGCTTCCAGGAAGCCAGAGGTACTGGTAACAGCCACTAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
CDS CCA 90 bp CAGAGCTGGAGTCAACCACCTGGTGATCAACACTTGCAACCTGGCTaGCGGGCGTCTGACCCACCACAGCTTCATATGGTGGGGGTAGCT +
Preference number: 5 (lower is better)
Translates to: QSWSQPPGDQHLQPG*RASDPPQLHMVGVA
Trigger: AGCTACCCCCACCATATGAAGCTGTGGTGGGTCAGACGCCCGCCAGCCAGGTTGCAAGTGTTGATCACCAGGTGGTTGACTCCAGCTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
CDS CCA 90 bp TGTCTAAAGTGCCATCAGGGGATGGGTGGCTTGGGCCCAGTGAGGTaGCACCCTCTGATGTTGGGAGACTCGTGCTACTTGCAGGCACTG +
Preference number: 5 (lower is better)
Translates to: CLKCHQGMGGLGPVR*HPLMLGDSCYLQAL
Trigger: CAGTGCCTGCAAGTAGCACGAGTCTCCCAACATCAGAGGGTGCCACCTCACTGGGCCCAAGCCACCCATCCCCTGATGGCACTTTAGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
CDS CCA 90 bp GGCCGCTCTTTGGAGACGGTCTGTAAGGTCTCTGGCTTGGTCCCTTaGCCCGTTTTCCAGGTATCTGGGTCACCAGTGGATGAGTGCTGG +
Preference number: 5 (lower is better)
Translates to: GRSLETVCKVSGLVP*PVFQVSGSPVDECW
Trigger: CCAGCACTCATCCACTGGTGACCCAGATACCTGGAAAACGGGCCAAGGGACCAAGCCAGAGACCTTACAGACCGTCTCCAAAGAGCGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
CDS TCA 90 bp CCTCTGATGTTGGGAGACTCGTGCTACTTGCAGGCACTGGAGTGCTaGAGTCAGCAGCGGTGTTTGGGTCCCCAGAGCTGGAGTCAACCA +
Preference number: 5 (lower is better)
Translates to: PLMLGDSCYLQALEC*SQQRCLGPQSWSQP
Trigger: TGGTTGACTCCAGCTCTGGGGACCCAAACACCGCTGCTGACTTCAGCACTCCAGTGCCTGCAAGTAGCACGAGTCTCCCAACATCAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
CDS TCA 90 bp CCCGTTTTCCAGGTATCTGGGTCACCAGTGGATGAGTGCTGGTGCTaGCAGGCAGCCATGGCTGGCTGTGATGTGGAGACTGCTTCACTC +
Preference number: 5 (lower is better)
Translates to: PVFQVSGSPVDECWC*QAAMAGCDVETASL
Trigger: GAGTGAAGCAGTCTCCACATCACAGCCAGCCATGGCTGCCTGTCAGCACCAGCACTCATCCACTGGTGACCCAGATACCTGGAAAACGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
CDS CCA 90 bp AGCTCACAGCATACACACACCTCCACACTGTCGAACTTGATCAACTaGCAGCCTTCGAGGGAGCTGACGAGCTGGGCGTTCTGGCAGGAG +
Preference number: 5 (lower is better)
Translates to: SSQHTHTSTLSNLIN*QPSRELTSWAFWQE
Trigger: CTCCTGCCAGAACGCCCAGCTCGTCAGCTCCCTCGAAGGCTGCCAGTTGATCAAGTTCGACAGTGTGGAGGTGTGTGTATGCTGTGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000119118.8
ENSMUST00000149851.8
CDS CCA 90 bp GCCGTGGGGAGTCACACAGGCAGCGTTGGCGGAGTGAGACCTATGTaGGAAGAACATCTGCAGGACATCAGCAGAGACCATCTGCATGCA +
Preference number: 5 (lower is better)
Translates to: AVGSHTGSVGGVRPM*EEHLQDISRDHLHA
Trigger: TGCATGCAGATGGTCTCTGCTGATGTCCTGCAGATGTTCTTCCCACATAGGTCTCACTCCGCCAACGCTGCCTGTGTGACTCCCCACGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000119118.8
ENSMUST00000149851.8
CDS CCA 90 bp GAGTCTGGTGGAGAATGGTGCCGTGGGGAGTCACACAGGCAGCGTTaGCGGAGTGAGACCTATGTGGGAAGAACATCTGCAGGACATCAG +
Preference number: 5 (lower is better)
Translates to: ESGGEWCRGESHRQR*RSETYVGRTSAGHQ
Trigger: CTGATGTCCTGCAGATGTTCTTCCCACATAGGTCTCACTCCGCCAACGCTGCCTGTGTGACTCCCCACGGCACCATTCTCCACCAGACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000119118.8
ENSMUST00000149851.8
CDS CCA 90 bp CGTGCTACTTGCAGGCACTGGAGTGCTGAAGTCAGCAGCGGTGTTTaGGTCCCCAGAGCTGGAGTCAACCACCTGGTGATCAACACTTGC +
Preference number: 5 (lower is better)
Translates to: RATCRHWSAEVSSGV*VPRAGVNHLVINTC
Trigger: GCAAGTGTTGATCACCAGGTGGTTGACTCCAGCTCTGGGGACCCAAACACCGCTGCTGACTTCAGCACTCCAGTGCCTGCAAGTAGCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
CDS-3UTR CAA 90 bp TCTAGTGGCTGTTACCAGTACCTCTGGCTTCCTGGAAGCCTGGAGGTTGGGCATAGTGTCTCCCCGAGGTaGCTGCATCCGGATGAGTGG +
Preference number: 5 (lower is better)
Translates to: SSGCYQYLWLPGSLEVGHSVSPR*LHPDEW
Trigger: CCACTCATCCGGATGCAGCAACCTCGGGGAGACACT...ATGCCCAACCTCCAGGCTTCCAGGAAGCCAGAGGTACTGGTAACAGCCACTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
CDS TCA 90 bp CAGTGGGTTCAGCTTCAGTGTCTCCCCGAGGTTGCTGCATCCGGATaGGTGGTGTTGCAGCTCACAGCATACACACACCTCCACACTGTC +
Preference number: 5 (lower is better)
Translates to: QWVQLQCLPEVAASG*VVLQLTAYTHLHTV
Trigger: GACAGTGTGGAGGTGTGTGTATGCTGTGAGCTGCAACACCACTCATCCGGATGCAGCAACCTCGGGGAGACACTGAAGCTGAACCCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000119118.8
ENSMUST00000148459.3
ENSMUST00000149851.8
CDS CCA 90 bp GGGTTCAGCTTCAGTGTCTCCCCGAGGTTGCTGCATCCGGATGAGTaGTGTTGCAGCTCACAGCATACACACACCTCCACACTGTCGAAC +
Preference number: 5 (lower is better)
Translates to: GFSFSVSPRLLHPDE*CCSSQHTHTSTLSN
Trigger: GTTCGACAGTGTGGAGGTGTGTGTATGCTGTGAGCTGCAACACCACTCATCCGGATGCAGCAACCTCGGGGAGACACTGAAGCTGAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000119118.8
ENSMUST00000148459.3
ENSMUST00000149851.8
CDS CCA 90 bp AAGAGTGTGGCCGCTCTTTGGAGACGGTCTGTAAGGTCTCTGGCTTaGTCCCTTGGCCCGTTTTCCAGGTATCTGGGTCACCAGTGGATG +
Preference number: 5 (lower is better)
Translates to: KSVAALWRRSVRSLA*SLGPFSRYLGHQWM
Trigger: CATCCACTGGTGACCCAGATACCTGGAAAACGGGCCAAGGGACCAAGCCAGAGACCTTACAGACCGTCTCCAAAGAGCGGCCACACTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
CDS GCA 90 bp AAGAGGAGATCCTTCAAGGTCAGCCGCACAGCGTTACAGTTTTCCTaGAGTGGGTTCAGCTTCAGTGTCTCCCCGAGGTTGCTGCATCCG +
Preference number: 5 (lower is better)
Translates to: KRRSFKVSRTALQFS*SGFSFSVSPRLLHP
Trigger: CGGATGCAGCAACCTCGGGGAGACACTGAAGCTGAACCCACTGCAGGAAAACTGTAACGCTGTGCGGCTGACCTTGAAGGATCTCCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000119118.8
ENSMUST00000148459.3
ENSMUST00000149851.8
CDS-3UTR CAA 90 bp ACCCAAAATGAGCTTTCCACTCCAGGGCTGGCTGCAAGCGTTTCAAATTCTACCACGCCCTGGGCTTGGTaGTGCCTGTGCGCTCAAGCT +
Preference number: 5 (lower is better)
Translates to: TQNELSTPGLAASVSNSTTPWAW*CLCAQA
Trigger: AGCTTGAGCGCACAGGCACAACCAAGCCCAGGGCGT...GGTAGAATTTGAAACGCTTGCAGCCAGCCCTGGAGTGGAAAGCTCATTTTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
CDS GCA 90 bp AGCTTCAGTGTCTCCCCGAGGTTGCTGCATCCGGATGAGTGGTGTTaGAGCTCACAGCATACACACACCTCCACACTGTCGAACTTGATC +
Preference number: 5 (lower is better)
Translates to: SFSVSPRLLHPDEWC*SSQHTHTSTLSNLI
Trigger: GATCAAGTTCGACAGTGTGGAGGTGTGTGTATGCTGTGAGCTGCAACACCACTCATCCGGATGCAGCAACCTCGGGGAGACACTGAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000119118.8
ENSMUST00000148459.3
ENSMUST00000149851.8
CDS GCA 90 bp AGTTTTCCTGCAGTGGGTTCAGCTTCAGTGTCTCCCCGAGGTTGCTaGATCCGGATGAGTGGTGTTGCAGCTCACAGCATACACACACCT +
Preference number: 5 (lower is better)
Translates to: SFPAVGSASVSPRGC*IRMSGVAAHSIHTP
Trigger: AGGTGTGTGTATGCTGTGAGCTGCAACACCACTCATCCGGATGCAGCAACCTCGGGGAGACACTGAAGCTGAACCCACTGCAGGAAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000119118.8
ENSMUST00000148459.3
ENSMUST00000149851.8
CDS GCA 90 bp GACCTATGTGGGAAGAACATCTGCAGGACATCAGCAGAGACCATCTaGATGCAGCACATGGCTGTGGCCAAGGCACACACAATGGTGGAG +
Preference number: 5 (lower is better)
Translates to: DLCGKNICRTSAETI*MQHMAVAKAHTMVE
Trigger: CTCCACCATTGTGTGTGCCTTGGCCACAGCCATGTGCTGCATGCAGATGGTCTCTGCTGATGTCCTGCAGATGTTCTTCCCACATAGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000119118.8
ENSMUST00000149851.8
CDS-3UTR CAA 90 bp ACCAGGCACAGAGGAGCATCGAGTGTTAAAGGCCTTGACTTGGGACAGATGCAGTGGCACCCTCTGATGTaGGGAGACTCGTGCTACTTG +
Preference number: 5 (lower is better)
Translates to: TRHRGASSVKGLDLGQMQWHPLM*GDSCYL
Trigger: CAAGTAGCACGAGTCTCCCAACATCAGAGGGTGCCA...CTGCATCTGTCCCAAGTCAAGGCCTTTAACACTCGATGCTCCTCTGTGCCTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
CDS GCA 90 bp TACAGTTTTCCTGCAGTGGGTTCAGCTTCAGTGTCTCCCCGAGGTTaGTGCATCCGGATGAGTGGTGTTGCAGCTCACAGCATACACACA +
Preference number: 5 (lower is better)
Translates to: YSFPAVGSASVSPRG*CIRMSGVAAHSIHT
Trigger: TGTGTGTATGCTGTGAGCTGCAACACCACTCATCCGGATGCAGCAACCTCGGGGAGACACTGAAGCTGAACCCACTGCAGGAAAACTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000119118.8
ENSMUST00000148459.3
ENSMUST00000149851.8
CDS-3UTR CAA 90 bp AAAGGCCTTTCTCTACCAAGCACGGTGGCATCTTGCAGGGCCAGACTTTGCAGGAGGATGCCAGGGCTGTaGATGGCAACATCATACAGA +
Preference number: 5 (lower is better)
Translates to: KGLSLPSTVASCRARLCRRMPGL*MATSYR
Trigger: TCTGTATGATGTTGCCATCAACAGCCCTGGCATCCT...CCTGCAAAGTCTGGCCCTGCAAGATGCCACCGTGCTTGGTAGAGAAAGGCCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
CDS-3UTR CAA 90 bp TCTGGTGGTCTGGAAACAACTTCCTATAAACTCTGCCTCAGCAGCAGCTGTGGGTGTAAGGTCTCTGGCTaGGTCCCTTGGCCCGTTTTC +
Preference number: 5 (lower is better)
Translates to: SGGLETTSYKLCLSSSCGCKVSG*VPWPVF
Trigger: GAAAACGGGCCAAGGGACCAAGCCAGAGACCTTACA...CCCACAGCTGCTGCTGAGGCAGAGTTTATAGGAAGTTGTTTCCAGACCACCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
CDS-3UTR CAA 90 bp ACAGAGGAGCATCGAGTGTTAAAGGCCTTGACTTGGGACAGATGCAGTGTCTTTATGGTGGAGAGGACATaGAGGGCACAGACACTGAAG +
Preference number: 5 (lower is better)
Translates to: TEEHRVLKALTWDRCSVFMVERT*RAQTLK
Trigger: CTTCAGTGTCTGTGCCCTCAATGTCCTCTCCACCAT...AAAGACACTGCATCTGTCCCAAGTCAAGGCCTTTAACACTCGATGCTCCTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
CDS-3UTR CAA 90 bp AATAAATACAACCTTTCCAGTTGTACGAACAGGTCTCTGGTGGTCTGGAAACAAAGTCAGCAGCGGTGTTaGGGTCCCCAGAGCTGGAGT +
Preference number: 5 (lower is better)
Translates to: NKYNLSSCTNRSLVVWKQSQQRC*GPQSWS
Trigger: ACTCCAGCTCTGGGGACCCAAACACCGCTGCTGACT...TTGTTTCCAGACCACCAGAGACCTGTTCGTACAACTGGAAAGGTTGTATTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
CDS GCA 72 bp CGAGCGCCATCTGCGTGGCCCCGAGAGCCAGCACGATaGGGGAACGGCCCGGGCACTCGCGCAGGCGGGACA +
Preference number: 6 (lower is better)
Translates to: RAPSAWPREPAR*GNGPGTRAGGT
Trigger: TGTCCCGCCTGCGCGAGTGCCCGGGCCGTTCCCGCATCGTGCTGGCTCTCGGGGCCACGCAGATGGCGCTCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000119118.8
ENSMUST00000148459.3
CDS GCA 72 bp AAGCTCACGGCCACGATGAGGCATCCGAGCGCCATCTaGGTGGCCCCGAGAGCCAGCACGATGCGGGAACGG +
Preference number: 6 (lower is better)
Translates to: KLTATMRHPSAI*VAPRASTMRER
Trigger: CCGTTCCCGCATCGTGCTGGCTCTCGGGGCCACGCAGATGGCGCTCGGATGCCTCATCGTGGCCGTGAGCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000119118.8
ENSMUST00000148459.3
CDS CCA 72 bp TGGCAGCCTTCGAGGGAGCTGACGAGCTGGGCGTTCTaGCAGGAGAGGATGGAGCCGGCCAGGTTGAGCATC +
Preference number: 6 (lower is better)
Translates to: WQPSRELTSWAF*QERMEPARLSI
Trigger: GATGCTCAACCTGGCCGGCTCCATCCTCTCCTGCCAGAACGCCCAGCTCGTCAGCTCCCTCGAAGGCTGCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000119118.8
ENSMUST00000149851.8
CDS TCA 72 bp GGCCTCCTCCACCCTGGGCTCCTCCGAGGTGGCCATTaGTCGTATGGTGCCCACCACATGTCGCACCTCTGT +
Preference number: 6 (lower is better)
Translates to: GLLHPGLLRGGH*SYGAHHMSHLC
Trigger: ACAGAGGTGCGACATGTGGTGGGCACCATACGATCAATGGCCACCTCGGAGGAGCCCAGGGTGGAGGAGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
CDS GCA 72 bp CCCTGGGCTTGGTTGTGCCTGTGCGCTCAAGCTGGCTaGCTCTGGAGACATGTGGTGAGGGACTGGAGTGGG +
Preference number: 6 (lower is better)
Translates to: PWAWLCLCAQAG*LWRHVVRDWSG
Trigger: CCCACTCCAGTCCCTCACCACATGTCTCCAGAGGCAGCCAGCTTGAGCGCACAGGCACAACCAAGCCCAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
CDS GCA 72 bp CCCAGAGCTGGAGTCAACCACCTGGTGATCAACACTTaGAACCTGGCTGGCGGGCGTCTGACCCACCACAGC +
Preference number: 6 (lower is better)
Translates to: PRAGVNHLVINT*NLAGGRLTHHS
Trigger: GCTGTGGTGGGTCAGACGCCCGCCAGCCAGGTTGCAAGTGTTGATCACCAGGTGGTTGACTCCAGCTCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
CDS CCA 72 bp CAAAGTCCAGGTGGAGACCCCTGTGGGCCTCCGCTGTaGGTGTACAGGTGTACTCTGGAGGGTAGTAGGGCG +
Preference number: 6 (lower is better)
Translates to: QSPGGDPCGPPL*VYRCTLEGSRA
Trigger: CGCCCTACTACCCTCCAGAGTACACCTGTACACCCACAGCGGAGGCCCACAGGGGTCTCCACCTGGACTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000119118.8
ENSMUST00000149851.8
CDS CAA 72 bp GGTGGCTTGGGCCCAGTGAGGTGGCACCCTCTGATGTaGGGAGACTCGTGCTACTTGCAGGCACTGGAGTGC +
Preference number: 6 (lower is better)
Translates to: GGLGPVRWHPLM*GDSCYLQALEC
Trigger: GCACTCCAGTGCCTGCAAGTAGCACGAGTCTCCCAACATCAGAGGGTGCCACCTCACTGGGCCCAAGCCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
CDS CCA 72 bp TACAGAGTGCTGAATGGCGAGGAGGCAAAGTCCAGGTaGAGACCCCTGTGGGCCTCCGCTGTGGGTGTACAG +
Preference number: 6 (lower is better)
Translates to: YRVLNGEEAKSR*RPLWASAVGVQ
Trigger: CTGTACACCCACAGCGGAGGCCCACAGGGGTCTCCACCTGGACTTTGCCTCCTCGCCATTCAGCACTCTGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000119118.8
ENSMUST00000149851.8
CDS CCA 72 bp TGCCATCAGGGGATGGGTGGCTTGGGCCCAGTGAGGTaGCACCCTCTGATGTTGGGAGACTCGTGCTACTTG +
Preference number: 6 (lower is better)
Translates to: CHQGMGGLGPVR*HPLMLGDSCYL
Trigger: CAAGTAGCACGAGTCTCCCAACATCAGAGGGTGCCACCTCACTGGGCCCAAGCCACCCATCCCCTGATGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
CDS TCA 72 bp TTGGGAGACTCGTGCTACTTGCAGGCACTGGAGTGCTaGAGTCAGCAGCGGTGTTTGGGTCCCCAGAGCTGG +
Preference number: 6 (lower is better)
Translates to: LGDSCYLQALEC*SQQRCLGPQSW
Trigger: CCAGCTCTGGGGACCCAAACACCGCTGCTGACTTCAGCACTCCAGTGCCTGCAAGTAGCACGAGTCTCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
CDS TCA 72 bp TTGGCCCGTTTTCCAGGTATCTGGGTCACCAGTGGATaGGTGCTGGTGCTGACAGGCAGCCATGGCTGGCTG +
Preference number: 6 (lower is better)
Translates to: LARFPGIWVTSG*VLVLTGSHGWL
Trigger: CAGCCAGCCATGGCTGCCTGTCAGCACCAGCACTCATCCACTGGTGACCCAGATACCTGGAAAACGGGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
CDS GCA 72 bp CCTGCAGTGGGTTCAGCTTCAGTGTCTCCCCGAGGTTaGTGCATCCGGATGAGTGGTGTTGCAGCTCACAGC +
Preference number: 6 (lower is better)
Translates to: PAVGSASVSPRG*CIRMSGVAAHS
Trigger: GCTGTGAGCTGCAACACCACTCATCCGGATGCAGCAACCTCGGGGAGACACTGAAGCTGAACCCACTGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000119118.8
ENSMUST00000148459.3
ENSMUST00000149851.8
CDS CCA 72 bp TCCCTTGGCCCGTTTTCCAGGTATCTGGGTCACCAGTaGATGAGTGCTGGTGCTGACAGGCAGCCATGGCTG +
Preference number: 6 (lower is better)
Translates to: SLGPFSRYLGHQ*MSAGADRQPWL
Trigger: CAGCCATGGCTGCCTGTCAGCACCAGCACTCATCCACTGGTGACCCAGATACCTGGAAAACGGGCCAAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
CDS CAA 90 bp TGTTTGGGTCCCCAGAGCTGGAGTCAACCACCTGGTGATCAACACTaGCAACCTGGCTGGCGGGCGTCTGACCCACCACAGCTTCATATG +
Preference number: 6 (lower is better)
Translates to: CLGPQSWSQPPGDQH*QPGWRASDPPQLHM
Trigger: CATATGAAGCTGTGGTGGGTCAGACGCCCGCCAGCCAGGTTGCAAGTGTTGATCACCAGGTGGTTGACTCCAGCTCTGGGGACCCAAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
CDS TCA 72 bp GTGCCGTGGGGAGTCACACAGGCAGCGTTGGCGGAGTaGGACCTATGTGGGAAGAACATCTGCAGGACATCA +
Preference number: 6 (lower is better)
Translates to: VPWGVTQAALAE*DLCGKNICRTS
Trigger: TGATGTCCTGCAGATGTTCTTCCCACATAGGTCTCACTCCGCCAACGCTGCCTGTGTGACTCCCCACGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000119118.8
ENSMUST00000149851.8
CDS TCA 72 bp CAGGTATCTGGGTCACCAGTGGATGAGTGCTGGTGCTaGCAGGCAGCCATGGCTGGCTGTGATGTGGAGACT +
Preference number: 6 (lower is better)
Translates to: QVSGSPVDECWC*QAAMAGCDVET
Trigger: AGTCTCCACATCACAGCCAGCCATGGCTGCCTGTCAGCACCAGCACTCATCCACTGGTGACCCAGATACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
CDS GCA 72 bp GTCTCCCCGAGGTTGCTGCATCCGGATGAGTGGTGTTaGAGCTCACAGCATACACACACCTCCACACTGTCG +
Preference number: 6 (lower is better)
Translates to: VSPRLLHPDEWC*SSQHTHTSTLS
Trigger: CGACAGTGTGGAGGTGTGTGTATGCTGTGAGCTGCAACACCACTCATCCGGATGCAGCAACCTCGGGGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000119118.8
ENSMUST00000148459.3
ENSMUST00000149851.8
CDS CCA 72 bp CACCAGTGGATGAGTGCTGGTGCTGACAGGCAGCCATaGCTGGCTGTGATGTGGAGACTGCTTCACTCGATG +
Preference number: 6 (lower is better)
Translates to: HQWMSAGADRQP*LAVMWRLLHSM
Trigger: CATCGAGTGAAGCAGTCTCCACATCACAGCCAGCCATGGCTGCCTGTCAGCACCAGCACTCATCCACTGGTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
CDS CCA 72 bp GCCGCTCTTTGGAGACGGTCTGTAAGGTCTCTGGCTTaGTCCCTTGGCCCGTTTTCCAGGTATCTGGGTCAC +
Preference number: 6 (lower is better)
Translates to: AALWRRSVRSLA*SLGPFSRYLGH
Trigger: GTGACCCAGATACCTGGAAAACGGGCCAAGGGACCAAGCCAGAGACCTTACAGACCGTCTCCAAAGAGCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
CDS CAA 72 bp GGCCGCTCTTTGGAGACGGTCTGTAAGGTCTCTGGCTaGGTCCCTTGGCCCGTTTTCCAGGTATCTGGGTCA +
Preference number: 6 (lower is better)
Translates to: GRSLETVCKVSG*VPWPVFQVSGS
Trigger: TGACCCAGATACCTGGAAAACGGGCCAAGGGACCAAGCCAGAGACCTTACAGACCGTCTCCAAAGAGCGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
CDS CAA 90 bp CAGCACATGGCTGTGGCCAAGGCACACACAATGGTGGAGAGGACATaGAGGGCACAGACACTGAAGAGGAGATCCTTCAAGGTCAGCCGC +
Preference number: 6 (lower is better)
Translates to: QHMAVAKAHTMVERT*RAQTLKRRSFKVSR
Trigger: GCGGCTGACCTTGAAGGATCTCCTCTTCAGTGTCTGTGCCCTCAATGTCCTCTCCACCATTGTGTGTGCCTTGGCCACAGCCATGTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000119118.8
ENSMUST00000148459.3
ENSMUST00000149851.8
CDS TCA 72 bp CAGCTTCAGTGTCTCCCCGAGGTTGCTGCATCCGGATaGGTGGTGTTGCAGCTCACAGCATACACACACCTC +
Preference number: 6 (lower is better)
Translates to: QLQCLPEVAASG*VVLQLTAYTHL
Trigger: GAGGTGTGTGTATGCTGTGAGCTGCAACACCACTCATCCGGATGCAGCAACCTCGGGGAGACACTGAAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000119118.8
ENSMUST00000148459.3
ENSMUST00000149851.8
CDS GCA 72 bp GCAGTGGGTTCAGCTTCAGTGTCTCCCCGAGGTTGCTaGATCCGGATGAGTGGTGTTGCAGCTCACAGCATA +
Preference number: 6 (lower is better)
Translates to: AVGSASVSPRGC*IRMSGVAAHSI
Trigger: TATGCTGTGAGCTGCAACACCACTCATCCGGATGCAGCAACCTCGGGGAGACACTGAAGCTGAACCCACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000119118.8
ENSMUST00000148459.3
ENSMUST00000149851.8
CDS CCA 72 bp CATACACACACCTCCACACTGTCGAACTTGATCAACTaGCAGCCTTCGAGGGAGCTGACGAGCTGGGCGTTC +
Preference number: 6 (lower is better)
Translates to: HTHTSTLSNLIN*QPSRELTSWAF
Trigger: GAACGCCCAGCTCGTCAGCTCCCTCGAAGGCTGCCAGTTGATCAAGTTCGACAGTGTGGAGGTGTGTGTATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000119118.8
ENSMUST00000149851.8
CDS CCA 72 bp GCAGGACATCAGCAGAGACCATCTGCATGCAGCACATaGCTGTGGCCAAGGCACACACAATGGTGGAGAGGA +
Preference number: 6 (lower is better)
Translates to: AGHQQRPSACST*LWPRHTQWWRG
Trigger: TCCTCTCCACCATTGTGTGTGCCTTGGCCACAGCCATGTGCTGCATGCAGATGGTCTCTGCTGATGTCCTGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000119118.8
ENSMUST00000148459.3
ENSMUST00000149851.8
CDS CCA 72 bp AGTCAACCACCTGGTGATCAACACTTGCAACCTGGCTaGCGGGCGTCTGACCCACCACAGCTTCATATGGTG +
Preference number: 6 (lower is better)
Translates to: SQPPGDQHLQPG*RASDPPQLHMV
Trigger: CACCATATGAAGCTGTGGTGGGTCAGACGCCCGCCAGCCAGGTTGCAAGTGTTGATCACCAGGTGGTTGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
CDS CAA 90 bp AAAGAGTGTGGCCGCTCTTTGGAGACGGTCTGTAAGGTCTCTGGCTaGGTCCCTTGGCCCGTTTTCCAGGTATCTGGGTCACCAGTGGAT +
Preference number: 6 (lower is better)
Translates to: KECGRSLETVCKVSG*VPWPVFQVSGSPVD
Trigger: ATCCACTGGTGACCCAGATACCTGGAAAACGGGCCAAGGGACCAAGCCAGAGACCTTACAGACCGTCTCCAAAGAGCGGCCACACTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
CDS GCA 72 bp TCCTTCAAGGTCAGCCGCACAGCGTTACAGTTTTCCTaGAGTGGGTTCAGCTTCAGTGTCTCCCCGAGGTTG +
Preference number: 6 (lower is better)
Translates to: SFKVSRTALQFS*SGFSFSVSPRL
Trigger: CAACCTCGGGGAGACACTGAAGCTGAACCCACTGCAGGAAAACTGTAACGCTGTGCGGCTGACCTTGAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000119118.8
ENSMUST00000148459.3
ENSMUST00000149851.8
CDS GCA 72 bp CACCACATGTCGCACCTCTGTAGGGAGGCTGCAGTGTaGGTGTTCCAAAAACTTAGCCACCAGAACCCTGGT +
Preference number: 6 (lower is better)
Translates to: HHMSHLCREAAV*VFQKLSHQNPG
Trigger: ACCAGGGTTCTGGTGGCTAAGTTTTTGGAACACGCACACTGCAGCCTCCCTACAGAGGTGCGACATGTGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
CDS CCA 72 bp TTCAGTGTCTCCCCGAGGTTGCTGCATCCGGATGAGTaGTGTTGCAGCTCACAGCATACACACACCTCCACA +
Preference number: 6 (lower is better)
Translates to: FSVSPRLLHPDE*CCSSQHTHTST
Trigger: TGTGGAGGTGTGTGTATGCTGTGAGCTGCAACACCACTCATCCGGATGCAGCAACCTCGGGGAGACACTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000119118.8
ENSMUST00000148459.3
ENSMUST00000149851.8
CDS CCA 72 bp AGGGCTGTTGATGGCAACATCATACAGAGTGCTGAATaGCGAGGAGGCAAAGTCCAGGTGGAGACCCCTGTG +
Preference number: 6 (lower is better)
Translates to: RAVDGNIIQSAE*RGGKVQVETPV
Trigger: CACAGGGGTCTCCACCTGGACTTTGCCTCCTCGCCATTCAGCACTCTGTATGATGTTGCCATCAACAGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000119118.8
ENSMUST00000149851.8
CDS CCA 72 bp TTGGAGACGGTCTGTAAGGTCTCTGGCTTGGTCCCTTaGCCCGTTTTCCAGGTATCTGGGTCACCAGTGGAT +
Preference number: 6 (lower is better)
Translates to: LETVCKVSGLVP*PVFQVSGSPVD
Trigger: ATCCACTGGTGACCCAGATACCTGGAAAACGGGCCAAGGGACCAAGCCAGAGACCTTACAGACCGTCTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
CDS CCA 72 bp AGGCCTTGCTCTCCACTAAAGAGTGTGGCCGCTCTTTaGAGACGGTCTGTAAGGTCTCTGGCTTGGTCCCTT +
Preference number: 6 (lower is better)
Translates to: RPCSPLKSVAAL*RRSVRSLAWSL
Trigger: AAGGGACCAAGCCAGAGACCTTACAGACCGTCTCCAAAGAGCGGCCACACTCTTTAGTGGAGAGCAAGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119118.8
CDS CCA 72 bp AGTCACACAGGCAGCGTTGGCGGAGTGAGACCTATGTaGGAAGAACATCTGCAGGACATCAGCAGAGACCAT +
Preference number: 6 (lower is better)
Translates to: SHTGSVGGVRPM*EEHLQDISRDH
Trigger: ATGGTCTCTGCTGATGTCCTGCAGATGTTCTTCCCACATAGGTCTCACTCCGCCAACGCTGCCTGTGTGACT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000119118.8
ENSMUST00000149851.8
CDS CAA 72 bp GCTGTGGCCAAGGCACACACAATGGTGGAGAGGACATaGAGGGCACAGACACTGAAGAGGAGATCCTTCAAG +
Preference number: 6 (lower is better)
Translates to: AVAKAHTMVERT*RAQTLKRRSFK
Trigger: CTTGAAGGATCTCCTCTTCAGTGTCTGTGCCCTCAATGTCCTCTCCACCATTGTGTGTGCCTTGGCCACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000119118.8
ENSMUST00000148459.3
ENSMUST00000149851.8
CDS CAA 90 bp TTACAGTTTTCCTGCAGTGGGTTCAGCTTCAGTGTCTCCCCGAGGTaGCTGCATCCGGATGAGTGGTGTTGCAGCTCACAGCATACACAC +
Preference number: 6 (lower is better)
Translates to: LQFSCSGFSFSVSPR*LHPDEWCCSSQHTH
Trigger: GTGTGTATGCTGTGAGCTGCAACACCACTCATCCGGATGCAGCAACCTCGGGGAGACACTGAAGCTGAACCCACTGCAGGAAAACTGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000119118.8
ENSMUST00000148459.3
ENSMUST00000149851.8