Pregenerated sensors for FAM187B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046826Ensembl transcript IDs: ENSMUST00000058093.6, ENSMUST00000128384.3, ENSMUST00000129773.2
Found 119 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTTGGCTCACACACCTCCAGTGGCTCATGTGGTGCCACTTATGGATaGCTAGAGCTAAGGATGGGACAGTGGAGAGATACCAGGTCCTCT | + |
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Preference number: 1 (lower is better) Translates to: VGSHTSSGSCGATYG*LELRMGQWRDTRSS Trigger: AGAGGACCTGGTATCTCTCCACTGTCCCATCCTTAGCTCTAGCCATCCATAAGTGGCACCACATGAGCCACTGGAGGTGTGTGAGCCAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058093.6 ENSMUST00000128384.3 ENSMUST00000129773.2 |
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| 3UTR CCA 90 bp | CTTTGTTGGCTCACACACCTCCAGTGGCTCATGTGGTGCCACTTATaGATGGCTAGAGCTAAGGATGGGACAGTGGAGAGATACCAGGTC | + |
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Preference number: 1 (lower is better) Translates to: LCWLTHLQWLMWCHL*MARAKDGTVERYQV Trigger: GACCTGGTATCTCTCCACTGTCCCATCCTTAGCTCTAGCCATCCATAAGTGGCACCACATGAGCCACTGGAGGTGTGTGAGCCAACAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058093.6 ENSMUST00000128384.3 ENSMUST00000129773.2 |
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| 3UTR-3UTR CCA 90 bp | AAAGTCACACCACACACCCTGAGAAGGTTCCCTCCTTCCCTTTCTCCTTCTAAGCTCCAGTGGCTCATGTaGTGCCACTTATGGATGGCT | + |
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Preference number: 2 (lower is better) Translates to: KVTPHTLRRFPPSLSPSKLQWLM*CHLWMA Trigger: AGCCATCCATAAGTGGCACCACATGAGCCACTGGAG...CTTAGAAGGAGAAAGGGAAGGAGGGAACCTTCTCAGGGTGTGTGGTGTGACTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058093.6 ENSMUST00000129773.2 |
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| 3UTR-3UTR CCA 90 bp | AGTCTGTCATTAGTGTCTGATCTGGGAAGAACAGATGGTTGTTCACAGCTGCCCAATCCAGGTCTTTGTTaGCTCACACACCTCCAGTGG | + |
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Preference number: 2 (lower is better) Translates to: SLSLVSDLGRTDGCSQLPNPGLC*LTHLQW Trigger: CCACTGGAGGTGTGTGAGCCAACAAAGACCTGGATT...GGGCAGCTGTGAACAACCATCTGTTCTTCCCAGATCAGACACTAATGACAGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058093.6 ENSMUST00000129773.2 |
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| 3UTR-3UTR TCA 90 bp | TTAGTGTCTGATCTGGGAAGAACAGATGGTTGTTCACAGCTGCCCAGAGAAAGTTCTGTACAATGGGGGTaGTCAATAGGTAAGCCGAGC | + |
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Preference number: 2 (lower is better) Translates to: LVSDLGRTDGCSQLPRESSVQWG*SIGKPS Trigger: GCTCGGCTTACCTATTGATCACCCCCATTGTACAGA...ACTTTCTCTGGGCAGCTGTGAACAACCATCTGTTCTTCCCAGATCAGACACTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058093.6 ENSMUST00000129773.2 |
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| 3UTR-3UTR TCA 90 bp | TCATTAGTGTCTGATCTGGGAAGAACAGATGGTTGTTCACAGCTGCCCAGAGAATCTGTACAATGGGGGTaGTCAATAGGTAAGCCGAGC | + |
|
Preference number: 2 (lower is better) Translates to: SLVSDLGRTDGCSQLPRESVQWG*SIGKPS Trigger: GCTCGGCTTACCTATTGATCACCCCCATTGTACAGA...TTCTCTGGGCAGCTGTGAACAACCATCTGTTCTTCCCAGATCAGACACTAATGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058093.6 ENSMUST00000129773.2 |
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| 3UTR-3UTR CCA 90 bp | TTAGTGTCTGATCTGGGAAGAACAGATGGTTGTTCACAGCTGCCCAGAGAAAGTCTAAGGATGGGACAGTaGAGAGATACCAGGTCCTCT | + |
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Preference number: 2 (lower is better) Translates to: LVSDLGRTDGCSQLPRESLRMGQ*RDTRSS Trigger: AGAGGACCTGGTATCTCTCCACTGTCCCATCCTTAG...ACTTTCTCTGGGCAGCTGTGAACAACCATCTGTTCTTCCCAGATCAGACACTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058093.6 ENSMUST00000129773.2 |
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| 3UTR CCA 72 bp | CACACCTCCAGTGGCTCATGTGGTGCCACTTATGGATaGCTAGAGCTAAGGATGGGACAGTGGAGAGATACC | + |
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Preference number: 3 (lower is better) Translates to: HTSSGSCGATYG*LELRMGQWRDT Trigger: GGTATCTCTCCACTGTCCCATCCTTAGCTCTAGCCATCCATAAGTGGCACCACATGAGCCACTGGAGGTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058093.6 ENSMUST00000128384.3 ENSMUST00000129773.2 |
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| 3UTR CCA 72 bp | CTCACACACCTCCAGTGGCTCATGTGGTGCCACTTATaGATGGCTAGAGCTAAGGATGGGACAGTGGAGAGA | + |
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Preference number: 3 (lower is better) Translates to: LTHLQWLMWCHL*MARAKDGTVER Trigger: TCTCTCCACTGTCCCATCCTTAGCTCTAGCCATCCATAAGTGGCACCACATGAGCCACTGGAGGTGTGTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058093.6 ENSMUST00000128384.3 ENSMUST00000129773.2 |
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| 3UTR TCA 72 bp | TTCACAGCTGCCCAGAGAAAGTCACACCACACACCCTaGGAAGGTTCCCTCCTTCCCTTTCTCCTTCTAAGG | + |
|
Preference number: 3 (lower is better) Translates to: FTAAQRKSHHTP*EGSLLPFLLLR Trigger: CCTTAGAAGGAGAAAGGGAAGGAGGGAACCTTCTCAGGGTGTGTGGTGTGACTTTCTCTGGGCAGCTGTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058093.6 ENSMUST00000129773.2 |
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| 3UTR GCA 72 bp | CTTTGTTGGCTCACACACCTCCAGTGGCTCATGTGGTaGCACTTATGGATGGCTAGAGCTAAGGATGGGACA | + |
|
Preference number: 3 (lower is better) Translates to: LCWLTHLQWLMW*HLWMARAKDGT Trigger: TGTCCCATCCTTAGCTCTAGCCATCCATAAGTGGCACCACATGAGCCACTGGAGGTGTGTGAGCCAACAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058093.6 ENSMUST00000128384.3 ENSMUST00000129773.2 |
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| 3UTR CCA 72 bp | GCCACTTATGGATGGCTAGAGCTAAGGATGGGACAGTaGAGAGATACCAGGTCCTCTTGGCTACAGAAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: ATYGWLELRMGQ*RDTRSSWLQKA Trigger: AGCCTTCTGTAGCCAAGAGGACCTGGTATCTCTCCACTGTCCCATCCTTAGCTCTAGCCATCCATAAGTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058093.6 ENSMUST00000128384.3 ENSMUST00000129773.2 |
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| 3UTR CCA 72 bp | GTGAAGTGGCCACTAGATCTTAATCCAGGTCTTTGTTaGCTCACACACCTCCAGTGGCTCATGTGGTGCCAC | + |
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Preference number: 3 (lower is better) Translates to: VKWPLDLNPGLC*LTHLQWLMWCH Trigger: GTGGCACCACATGAGCCACTGGAGGTGTGTGAGCCAACAAAGACCTGGATTAAGATCTAGTGGCCACTTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058093.6 ENSMUST00000129773.2 |
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| 3UTR GCA 72 bp | TGTCTGATCTGGGAAGAACAGATGGTTGTTCACAGCTaGCCAGAGAAAGTCACACCACACACCCTGAGAAGG | + |
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Preference number: 3 (lower is better) Translates to: CLIWEEQMVVHS*PEKVTPHTLRR Trigger: CCTTCTCAGGGTGTGTGGTGTGACTTTCTCTGGGCAGCTGTGAACAACCATCTGTTCTTCCCAGATCAGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058093.6 ENSMUST00000129773.2 |
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| 3UTR CCA 72 bp | CTTAATCCAGGTCTTTGTTGGCTCACACACCTCCAGTaGCTCATGTGGTGCCACTTATGGATGGCTAGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: LNPGLCWLTHLQ*LMWCHLWMARA Trigger: AGCTCTAGCCATCCATAAGTGGCACCACATGAGCCACTGGAGGTGTGTGAGCCAACAAAGACCTGGATTAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058093.6 ENSMUST00000129773.2 |
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| CDS-3UTR CCA 90 bp | TGGATGGCTAGAGCTAAGGATGGGACAGTGGAGAGATACCAGGTCCTCTTGGCTTGGCAGGCTTGTAGCTaGAGTTCAGGCCTCAGGCGG | + |
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Preference number: 4 (lower is better) Translates to: WMARAKDGTVERYQVLLAWQACS*SSGLRR Trigger: CCGCCTGAGGCCTGAACTCCAGCTACAAGCCTGCCA...AGCCAAGAGGACCTGGTATCTCTCCACTGTCCCATCCTTAGCTCTAGCCATCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058093.6 |
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| CDS-3UTR TCA 90 bp | CACTTATGGATGGCTAGAGCTAAGGATGGGACAGTGGAGAGATACCAGGTCCTCCTGGGAGAGCAGAGCTaGGCAGTGTCCACAGGATGG | + |
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Preference number: 4 (lower is better) Translates to: HLWMARAKDGTVERYQVLLGEQS*AVSTGW Trigger: CCATCCTGTGGACACTGCTCAGCTCTGCTCTCCCAG...GAGGACCTGGTATCTCTCCACTGTCCCATCCTTAGCTCTAGCCATCCATAAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128384.3 |
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| CDS-3UTR CCA 90 bp | AGAGCTAAGGATGGGACAGTGGAGAGATACCAGGTCCTCTTGGCTACAGAAGGCTGTCTGGCTGGATTCTaGGCTGCCAAGGGTTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: RAKDGTVERYQVLLATEGCLAGF*AAKGSG Trigger: CCCAGAACCCTTGGCAGCCCAGAATCCAGCCAGACA...GCCTTCTGTAGCCAAGAGGACCTGGTATCTCTCCACTGTCCCATCCTTAGCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058093.6 ENSMUST00000128384.3 ENSMUST00000129773.2 |
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| CDS-3UTR CCA 90 bp | GGATGGCTAGAGCTAAGGATGGGACAGTGGAGAGATACCAGGTCCTCTTGGCTATCTGCCTTGTCTGGCTaGATTCTGGGCTGCCAAGGG | + |
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Preference number: 4 (lower is better) Translates to: GWLELRMGQWRDTRSSWLSALSG*ILGCQG Trigger: CCCTTGGCAGCCCAGAATCCAGCCAGACAAGGCAGA...TAGCCAAGAGGACCTGGTATCTCTCCACTGTCCCATCCTTAGCTCTAGCCATCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058093.6 ENSMUST00000128384.3 ENSMUST00000129773.2 |
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| CDS-3UTR CCA 90 bp | ATGTGGTGCCACTTATGGATGGCTAGAGCTAAGGATGGGACAGTGGAGAGATACGTGGGGCCCCAACACTaGGAGAGCAGAGCTGAGCAG | + |
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Preference number: 4 (lower is better) Translates to: MWCHLWMARAKDGTVERYVGPQH*ESRAEQ Trigger: CTGCTCAGCTCTGCTCTCCCAGTGTTGGGGCCCCAC...GTATCTCTCCACTGTCCCATCCTTAGCTCTAGCCATCCATAAGTGGCACCACAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128384.3 |
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| CDS-3UTR TCA 90 bp | GCTAGAGCTAAGGATGGGACAGTGGAGAGATACCAGGTCCTCTTGGCTACAGAATTCACCAGGAGGACCTaGCTCCTCTTCTTGCCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ARAKDGTVERYQVLLATEFTRRT*LLFLPQ Trigger: CTGCGGCAAGAAGAGGAGTCAGGTCCTCCTGGTGAA...TTCTGTAGCCAAGAGGACCTGGTATCTCTCCACTGTCCCATCCTTAGCTCTAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058093.6 ENSMUST00000128384.3 ENSMUST00000129773.2 |
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| CDS-3UTR TCA 90 bp | CTAGAGCTAAGGATGGGACAGTGGAGAGATACCAGGTCCTCTTGGCTACAGAAGTTCACCAGGAGGACCTaGCTCCTCTTCTTGCCGCAG | + |
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Preference number: 4 (lower is better) Translates to: LELRMGQWRDTRSSWLQKFTRRT*LLFLPQ Trigger: CTGCGGCAAGAAGAGGAGTCAGGTCCTCCTGGTGAA...CTTCTGTAGCCAAGAGGACCTGGTATCTCTCCACTGTCCCATCCTTAGCTCTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058093.6 ENSMUST00000128384.3 ENSMUST00000129773.2 |
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| CDS-3UTR TCA 90 bp | AGAGCTAAGGATGGGACAGTGGAGAGATACCAGGTCCTCTTGGCTACAGAAGGCCCTCTAAGGGCTCCTTaGTGTAGCAGTAACCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: RAKDGTVERYQVLLATEGPLRAP*CSSNPG Trigger: GCCTGGGTTACTGCTACATCAAGGAGCCCTTAGAGG...GCCTTCTGTAGCCAAGAGGACCTGGTATCTCTCCACTGTCCCATCCTTAGCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128384.3 |
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| CDS-3UTR CCA 90 bp | GCTAAGGATGGGACAGTGGAGAGATACCAGGTCCTCTTGGCTACAGAAGGCTCATCAGTGGGGTTGAACTaGGCTATGAGCTCCTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: AKDGTVERYQVLLATEGSSVGLN*AMSSCS Trigger: GGAGCAGGAGCTCATAGCCCAGTTCAACCCCACTGA...TGAGCCTTCTGTAGCCAAGAGGACCTGGTATCTCTCCACTGTCCCATCCTTAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058093.6 ENSMUST00000128384.3 ENSMUST00000129773.2 |
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| CDS-3UTR CCA 90 bp | TGCCACTTATGGATGGCTAGAGCTAAGGATGGGACAGTGGAGAGATACCAGGTCTGTCTGGCTGGATTCTaGGCTGCCAAGGGTTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: CHLWMARAKDGTVERYQVCLAGF*AAKGSG Trigger: CCCAGAACCCTTGGCAGCCCAGAATCCAGCCAGACA...GACCTGGTATCTCTCCACTGTCCCATCCTTAGCTCTAGCCATCCATAAGTGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058093.6 ENSMUST00000128384.3 ENSMUST00000129773.2 |
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| CDS-3UTR CCA 90 bp | TGCCACTTATGGATGGCTAGAGCTAAGGATGGGACAGTGGAGAGATACCAGGTCGGTGGACTGGGAAGATaGCTGTGTACTGGCCACCAG | + |
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Preference number: 4 (lower is better) Translates to: CHLWMARAKDGTVERYQVGGLGR*LCTGHQ Trigger: CTGGTGGCCAGTACACAGCCATCTTCCCAGTCCACC...GACCTGGTATCTCTCCACTGTCCCATCCTTAGCTCTAGCCATCCATAAGTGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128384.3 |
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| CDS-3UTR TCA 90 bp | AAAGTCACACCACACACCCTGAGAAGGTTCCCTCCTTCCCTTTCTCCTTCTAAGTTCACCAGGAGGACCTaGCTCCTCTTCTTGCCGCAG | + |
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Preference number: 4 (lower is better) Translates to: KVTPHTLRRFPPSLSPSKFTRRT*LLFLPQ Trigger: CTGCGGCAAGAAGAGGAGTCAGGTCCTCCTGGTGAA...CTTAGAAGGAGAAAGGGAAGGAGGGAACCTTCTCAGGGTGTGTGGTGTGACTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058093.6 ENSMUST00000129773.2 |
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| CDS-3UTR CCA 90 bp | CTGATCTGGGAAGAACAGATGGTTGTTCACAGCTGCCCAGAGAAAGTCACACCAGCCTCAGGCGGCTGTTaGTCACCTTCTCCTCTCTCA | + |
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Preference number: 4 (lower is better) Translates to: LIWEEQMVVHSCPEKVTPASGGC*SPSPLS Trigger: TGAGAGAGGAGAAGGTGACCAACAGCCGCCTGAGGC...TGGTGTGACTTTCTCTGGGCAGCTGTGAACAACCATCTGTTCTTCCCAGATCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058093.6 |
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| CDS-3UTR CCA 90 bp | ATGTGGTGCCACTTATGGATGGCTAGAGCTAAGGATGGGACAGTGGAGAGATACTGTCTGGCTGGATTCTaGGCTGCCAAGGGTTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: MWCHLWMARAKDGTVERYCLAGF*AAKGSG Trigger: CCCAGAACCCTTGGCAGCCCAGAATCCAGCCAGACA...GTATCTCTCCACTGTCCCATCCTTAGCTCTAGCCATCCATAAGTGGCACCACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058093.6 ENSMUST00000128384.3 ENSMUST00000129773.2 |
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| CDS-3UTR CCA 90 bp | TTATGGATGGCTAGAGCTAAGGATGGGACAGTGGAGAGATACCAGGTCCTCTTGTCTGCCTTGTCTGGCTaGATTCTGGGCTGCCAAGGG | + |
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Preference number: 4 (lower is better) Translates to: LWMARAKDGTVERYQVLLSALSG*ILGCQG Trigger: CCCTTGGCAGCCCAGAATCCAGCCAGACAAGGCAGA...CAAGAGGACCTGGTATCTCTCCACTGTCCCATCCTTAGCTCTAGCCATCCATAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058093.6 ENSMUST00000128384.3 ENSMUST00000129773.2 |
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| CDS-3UTR CCA 90 bp | CTGATCTGGGAAGAACAGATGGTTGTTCACAGCTGCCCAGAGAAAGTCACACCATCTGCCTTGTCTGGCTaGATTCTGGGCTGCCAAGGG | + |
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Preference number: 4 (lower is better) Translates to: LIWEEQMVVHSCPEKVTPSALSG*ILGCQG Trigger: CCCTTGGCAGCCCAGAATCCAGCCAGACAAGGCAGA...TGGTGTGACTTTCTCTGGGCAGCTGTGAACAACCATCTGTTCTTCCCAGATCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058093.6 ENSMUST00000129773.2 |
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| CDS-3UTR CCA 90 bp | ATGTGGTGCCACTTATGGATGGCTAGAGCTAAGGATGGGACAGTGGAGAGATACGGAGTCTGCCTTGTCTaGCTGGATTCTGGGCTGCCA | + |
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Preference number: 4 (lower is better) Translates to: MWCHLWMARAKDGTVERYGVCLV*LDSGLP Trigger: TGGCAGCCCAGAATCCAGCCAGACAAGGCAGACTCC...GTATCTCTCCACTGTCCCATCCTTAGCTCTAGCCATCCATAAGTGGCACCACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058093.6 ENSMUST00000128384.3 ENSMUST00000129773.2 |
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| CDS-3UTR CCA 90 bp | CTGATCTGGGAAGAACAGATGGTTGTTCACAGCTGCCCAGAGAAAGTCACACCAGGAGTCTGCCTTGTCTaGCTGGATTCTGGGCTGCCA | + |
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Preference number: 4 (lower is better) Translates to: LIWEEQMVVHSCPEKVTPGVCLV*LDSGLP Trigger: TGGCAGCCCAGAATCCAGCCAGACAAGGCAGACTCC...TGGTGTGACTTTCTCTGGGCAGCTGTGAACAACCATCTGTTCTTCCCAGATCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058093.6 ENSMUST00000129773.2 |
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| CDS-3UTR CCA 90 bp | GGATGGCTAGAGCTAAGGATGGGACAGTGGAGAGATACCAGGTCCTCTTGGCTAAGAGCACATCATGGCTaGAGAGGAGAGCCAGGAAAC | + |
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Preference number: 4 (lower is better) Translates to: GWLELRMGQWRDTRSSWLRAHHG*RGEPGN Trigger: GTTTCCTGGCTCTCCTCTCCAGCCATGATGTGCTCT...TAGCCAAGAGGACCTGGTATCTCTCCACTGTCCCATCCTTAGCTCTAGCCATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128384.3 |
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| CDS-3UTR GCA 90 bp | GCTAGAGCTAAGGATGGGACAGTGGAGAGATACCAGGTCCTCTTGGCTACAGAACCTGACTCCTCTTCTTaGCGCAGACAGGACGGAAAA | + |
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Preference number: 4 (lower is better) Translates to: ARAKDGTVERYQVLLATEPDSSS*RRQDGK Trigger: TTTTCCGTCCTGTCTGCGGCAAGAAGAGGAGTCAGG...TTCTGTAGCCAAGAGGACCTGGTATCTCTCCACTGTCCCATCCTTAGCTCTAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058093.6 ENSMUST00000128384.3 ENSMUST00000129773.2 |
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| CDS-3UTR CCA 90 bp | ATGTGGTGCCACTTATGGATGGCTAGAGCTAAGGATGGGACAGTGGAGAGATACTCAGTGGGGTTGAACTaGGCTATGAGCTCCTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: MWCHLWMARAKDGTVERYSVGLN*AMSSCS Trigger: GGAGCAGGAGCTCATAGCCCAGTTCAACCCCACTGA...GTATCTCTCCACTGTCCCATCCTTAGCTCTAGCCATCCATAAGTGGCACCACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058093.6 ENSMUST00000128384.3 ENSMUST00000129773.2 |
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| CDS-3UTR CCA 90 bp | GGATGGCTAGAGCTAAGGATGGGACAGTGGAGAGATACCAGGTCCTCTTGGCTAGTAAGCATGGTGGACTaGGAAGATGGCTGTGTACTG | + |
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Preference number: 4 (lower is better) Translates to: GWLELRMGQWRDTRSSWLVSMVD*EDGCVL Trigger: CAGTACACAGCCATCTTCCCAGTCCACCATGCTTAC...TAGCCAAGAGGACCTGGTATCTCTCCACTGTCCCATCCTTAGCTCTAGCCATCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128384.3 |
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| CDS-3UTR GCA 90 bp | CCACTAGATCTTAATCCAGGTCTTTGTTGGCTCACACACCTCCAGTGGCTCATGGCAGTATCACGTCACTaGCTGAGAGCAGGGCATACT | + |
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Preference number: 4 (lower is better) Translates to: PLDLNPGLCWLTHLQWLMAVSRH*LRAGHT Trigger: AGTATGCCCTGCTCTCAGGCAGTGACGTGATACTGC...CATGAGCCACTGGAGGTGTGTGAGCCAACAAAGACCTGGATTAAGATCTAGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058093.6 |
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| CDS-3UTR GCA 90 bp | ATGTGGTGCCACTTATGGATGGCTAGAGCTAAGGATGGGACAGTGGAGAGATACCCTGACTCCTCTTCTTaGCGCAGACAGGACGGAAAA | + |
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Preference number: 4 (lower is better) Translates to: MWCHLWMARAKDGTVERYPDSSS*RRQDGK Trigger: TTTTCCGTCCTGTCTGCGGCAAGAAGAGGAGTCAGG...GTATCTCTCCACTGTCCCATCCTTAGCTCTAGCCATCCATAAGTGGCACCACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058093.6 ENSMUST00000128384.3 ENSMUST00000129773.2 |
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| CDS-3UTR CCA 90 bp | CCACTAGATCTTAATCCAGGTCTTTGTTGGCTCACACACCTCCAGTGGCTCATGTCTGGGCCCACAGCATaGGAAGAGAAAGACCAACCA | + |
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Preference number: 4 (lower is better) Translates to: PLDLNPGLCWLTHLQWLMSGPTA*EEKDQP Trigger: TGGTTGGTCTTTCTCTTCCCATGCTGTGGGCCCAGA...CATGAGCCACTGGAGGTGTGTGAGCCAACAAAGACCTGGATTAAGATCTAGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058093.6 |
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| CDS-3UTR CCA 90 bp | CTAAGGATGGGACAGTGGAGAGATACCAGGTCCTCTTGGCTACAGAAGGCTCAGGTCGAGCATTGCTGTTaGGTTTGTCCAGCAGATATG | + |
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Preference number: 4 (lower is better) Translates to: LRMGQWRDTRSSWLQKAQVEHCC*VCPADM Trigger: CATATCTGCTGGACAAACCCAACAGCAATGCTCGAC...CTGAGCCTTCTGTAGCCAAGAGGACCTGGTATCTCTCCACTGTCCCATCCTTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058093.6 |
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| CDS-3UTR CCA 90 bp | TCATTAGTGTCTGATCTGGGAAGAACAGATGGTTGTTCACAGCTGCCCAGAGAAGGAGTCTGCCTTGTCTaGCTGGATTCTGGGCTGCCA | + |
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Preference number: 4 (lower is better) Translates to: SLVSDLGRTDGCSQLPREGVCLV*LDSGLP Trigger: TGGCAGCCCAGAATCCAGCCAGACAAGGCAGACTCC...TTCTCTGGGCAGCTGTGAACAACCATCTGTTCTTCCCAGATCAGACACTAATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058093.6 ENSMUST00000129773.2 |
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| CDS-3UTR CCA 90 bp | CTAGAGCTAAGGATGGGACAGTGGAGAGATACCAGGTCCTCTTGGCTACAGAAGTGCCAAGGTCCCCATTaGGTATACACTACCTCTCTG | + |
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Preference number: 4 (lower is better) Translates to: LELRMGQWRDTRSSWLQKCQGPH*VYTTSL Trigger: CAGAGAGGTAGTGTATACCCAATGGGGACCTTGGCA...CTTCTGTAGCCAAGAGGACCTGGTATCTCTCCACTGTCCCATCCTTAGCTCTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128384.3 |
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| CDS-3UTR TCA 90 bp | CACTTATGGATGGCTAGAGCTAAGGATGGGACAGTGGAGAGATACCAGGTCCTCTACACTACCTCTCTGTaGCTCAGGTTCAGTGTCTCA | + |
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Preference number: 4 (lower is better) Translates to: HLWMARAKDGTVERYQVLYTTSL*LRFSVS Trigger: TGAGACACTGAACCTGAGTCACAGAGAGGTAGTGTA...GAGGACCTGGTATCTCTCCACTGTCCCATCCTTAGCTCTAGCCATCCATAAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128384.3 |
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| CDS-3UTR GCA 90 bp | TTAGTGTCTGATCTGGGAAGAACAGATGGTTGTTCACAGCTGCCCAGAGAAAGTTGCCTCCCAGGTTCATaGTCTCATTTCCCATGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LVSDLGRTDGCSQLPRESCLPGS*SHFPWA Trigger: AGCCCATGGGAAATGAGAGCATGAACCTGGGAGGCA...ACTTTCTCTGGGCAGCTGTGAACAACCATCTGTTCTTCCCAGATCAGACACTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058093.6 |
||
| CDS-3UTR TCA 90 bp | CACTTATGGATGGCTAGAGCTAAGGATGGGACAGTGGAGAGATACCAGGTCCTCTGGCATGCAGCTTGGTaGTATCTTGGAAATCAATCT | + |
|
Preference number: 4 (lower is better) Translates to: HLWMARAKDGTVERYQVLWHAAW*YLGNQS Trigger: AGATTGATTTCCAAGATATCACCAAGCTGCATGCCA...GAGGACCTGGTATCTCTCCACTGTCCCATCCTTAGCTCTAGCCATCCATAAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128384.3 |
||
| CDS-3UTR CCA 90 bp | TTATGGATGGCTAGAGCTAAGGATGGGACAGTGGAGAGATACCAGGTCCTCTTGCAAAACATCTGTAAGTaGCAGGCTGGAAGACCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LWMARAKDGTVERYQVLLQNICK*QAGRPS Trigger: TGAAGGTCTTCCAGCCTGCCACTTACAGATGTTTTG...CAAGAGGACCTGGTATCTCTCCACTGTCCCATCCTTAGCTCTAGCCATCCATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058093.6 ENSMUST00000128384.3 ENSMUST00000129773.2 |
||
| CDS-3UTR CCA 90 bp | GCTAGAGCTAAGGATGGGACAGTGGAGAGATACCAGGTCCTCTTGGCTACAGAAATGGAGACCACCTTCTaGGCTCTTTCTTATATTGGA | + |
|
Preference number: 4 (lower is better) Translates to: ARAKDGTVERYQVLLATEMETTF*ALSYIG Trigger: TCCAATATAAGAAAGAGCCCAGAAGGTGGTCTCCAT...TTCTGTAGCCAAGAGGACCTGGTATCTCTCCACTGTCCCATCCTTAGCTCTAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128384.3 |
||
| CDS-3UTR CCA 90 bp | TTCTTTAGTCTGTCATTAGTGTCTGATCTGGGAAGAACAGATGGTTGTTCACAGTCAGTGGGGTTGAACTaGGCTATGAGCTCCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FFSLSLVSDLGRTDGCSQSVGLN*AMSSCS Trigger: GGAGCAGGAGCTCATAGCCCAGTTCAACCCCACTGA...CTGTGAACAACCATCTGTTCTTCCCAGATCAGACACTAATGACAGACTAAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058093.6 ENSMUST00000129773.2 |
||
| CDS-3UTR GCA 90 bp | CACTTATGGATGGCTAGAGCTAAGGATGGGACAGTGGAGAGATACCAGGTCCTCAGAAAAATACCAAAGTaGTTTGGGGTAGTTACACTG | + |
|
Preference number: 4 (lower is better) Translates to: HLWMARAKDGTVERYQVLRKIPK*FGVVTL Trigger: CAGTGTAACTACCCCAAAGCACTTTGGTATTTTTCT...GAGGACCTGGTATCTCTCCACTGTCCCATCCTTAGCTCTAGCCATCCATAAGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058093.6 |
||
| CDS CCA 90 bp | TTGGTCTCCGTGGCGGTGTCACAGGGTACCTGGCAGGCTTGTAGCTaGAGTTCAGGCCTCAGGCGGCTGTTGGTCACCTTCTCCTCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LVSVAVSQGTWQACS*SSGLRRLLVTFSSL Trigger: GAGAGAGGAGAAGGTGACCAACAGCCGCCTGAGGCCTGAACTCCAGCTACAAGCCTGCCAGGTACCCTGTGACACCGCCACGGAGACCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058093.6 |
||
| CDS CCA 90 bp | AGAGCCAGGAAACATTCCTTGGCCTTGGGACAGCTGACGGGAGTGTaGGGCCCCAACACTGGGAGAGCAGAGCTGAGCAGTGTCCACAGG | + |
|
Preference number: 5 (lower is better) Translates to: RARKHSLALGQLTGV*GPNTGRAELSSVHR Trigger: CCTGTGGACACTGCTCAGCTCTGCTCTCCCAGTGTTGGGGCCCCACACTCCCGTCAGCTGTCCCAAGGCCAAGGAATGTTTCCTGGCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128384.3 |
||
| CDS CCA 90 bp | GTACCTGGCAGGCTTGTAGCTGGAGTTCAGGCCTCAGGCGGCTGTTaGTCACCTTCTCCTCTCTCAGGTAGAGCCAGCAAGGCATGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: VPGRLVAGVQASGGC*SPSPLSGRASKAWA Trigger: AGCCCATGCCTTGCTGGCTCTACCTGAGAGAGGAGAAGGTGACCAACAGCCGCCTGAGGCCTGAACTCCAGCTACAAGCCTGCCAGGTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058093.6 |
||
| CDS TCA 90 bp | CCCACAAGTAGAGCCCACAGGGTACAGGCTCCTCTAAGGGCTCCTTaGTGTAGCAGTAACCCAGGCGTTTGCGCTCTCCCTGTCTCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: PTSRAHRVQAPLRAP*CSSNPGVCALPVSH Trigger: GTGGGAGACAGGGAGAGCGCAAACGCCTGGGTTACTGCTACATCAAGGAGCCCTTAGAGGAGCCTGTACCCTGTGGGCTCTACTTGTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128384.3 |
||
| CDS CCA 90 bp | GGCTGTTGGTCACCTTCTCCTCTCTCAGGTAGAGCCAGCAAGGCATaGGCTTTTCTTGGGGCTCCTCCACATAGCAGTAGCCTAGACGTT | + |
|
Preference number: 5 (lower is better) Translates to: GCWSPSPLSGRASKA*AFLGAPPHSSSLDV Trigger: AACGTCTAGGCTACTGCTATGTGGAGGAGCCCCAAGAAAAGCCCATGCCTTGCTGGCTCTACCTGAGAGAGGAGAAGGTGACCAACAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058093.6 |
||
| CDS-3UTR CAA 90 bp | AGAGCTAAGGATGGGACAGTGGAGAGATACCAGGTCCTCTTGGCTACAGAAGGCACCCTCCCATCAGGCTaGGAGTTGACCAGGGACAGT | + |
|
Preference number: 5 (lower is better) Translates to: RAKDGTVERYQVLLATEGTLPSG*ELTRDS Trigger: ACTGTCCCTGGTCAACTCCAAGCCTGATGGGAGGGT...GCCTTCTGTAGCCAAGAGGACCTGGTATCTCTCCACTGTCCCATCCTTAGCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058093.6 |
||
| CDS CCA 90 bp | TGGGTTTGTCCAGCAGATATGTGTCAAAGACAAAGTACGGCTGGTTaGTCTCCGTGGCGGTGTCACAGGGTACCTGGCAGGCTTGTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: WVCPADMCQRQSTAG*SPWRCHRVPGRLVA Trigger: AGCTACAAGCCTGCCAGGTACCCTGTGACACCGCCACGGAGACCAACCAGCCGTACTTTGTCTTTGACACATATCTGCTGGACAAACCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058093.6 |
||
| CDS CCA 90 bp | CTGTTGGGTTTGTCCAGCAGATATGTGTCAAAGACAAAGTACGGCTaGTTGGTCTCCGTGGCGGTGTCACAGGGTACCTGGCAGGCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: LLGLSSRYVSKTKYG*LVSVAVSQGTWQAC Trigger: ACAAGCCTGCCAGGTACCCTGTGACACCGCCACGGAGACCAACCAGCCGTACTTTGTCTTTGACACATATCTGCTGGACAAACCCAACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058093.6 |
||
| CDS-3UTR CAA 90 bp | TGGATGGCTAGAGCTAAGGATGGGACAGTGGAGAGATACCAGGTCCTCTTGGCTAGGCATGGGCTTTTCTaGGGGCTCCTCCACATAGCA | + |
|
Preference number: 5 (lower is better) Translates to: WMARAKDGTVERYQVLLARHGLF*GLLHIA Trigger: TGCTATGTGGAGGAGCCCCAAGAAAAGCCCATGCCT...AGCCAAGAGGACCTGGTATCTCTCCACTGTCCCATCCTTAGCTCTAGCCATCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058093.6 |
||
| CDS-3UTR CAA 90 bp | TGGATGGCTAGAGCTAAGGATGGGACAGTGGAGAGATACCAGGTCCTCTTGGCTCATGTCAGAGGGCTGTaGTCAGCTTCCCAGTGGACA | + |
|
Preference number: 5 (lower is better) Translates to: WMARAKDGTVERYQVLLAHVRGL*SASQWT Trigger: TGTCCACTGGGAAGCTGACAACAGCCCTCTGACATG...AGCCAAGAGGACCTGGTATCTCTCCACTGTCCCATCCTTAGCTCTAGCCATCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058093.6 ENSMUST00000128384.3 |
||
| CDS-3UTR CAA 90 bp | CTAAGGATGGGACAGTGGAGAGATACCAGGTCCTCTTGGCTACAGAAGGCTCAGCATGTCAGAGGGCTGTaGTCAGCTTCCCAGTGGACA | + |
|
Preference number: 5 (lower is better) Translates to: LRMGQWRDTRSSWLQKAQHVRGL*SASQWT Trigger: TGTCCACTGGGAAGCTGACAACAGCCCTCTGACATG...CTGAGCCTTCTGTAGCCAAGAGGACCTGGTATCTCTCCACTGTCCCATCCTTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058093.6 ENSMUST00000128384.3 |
||
| CDS TCA 90 bp | GTGGACAGGCCTGTAGATGGATGCGAAGGGACAGGTAAGCCGTGCTaGTCCGGACTCCTCTGTGAGCTTGAAGTTATCGAAGATGACGTA | + |
|
Preference number: 5 (lower is better) Translates to: VDRPVDGCEGTGKPC*SGLLCELEVIEDDV Trigger: TACGTCATCTTCGATAACTTCAAGCTCACAGAGGAGTCCGGATCAGCACGGCTTACCTGTCCCTTCGCATCCATCTACAGGCCTGTCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128384.3 |
||
| CDS-3UTR CAA 90 bp | CTTAATCCAGGTCTTTGTTGGCTCACACACCTCCAGTGGCTCATGTGGTGCCACGCGCTCACCTGGCTTTaGGCAACGGTTACAATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LNPGLCWLTHLQWLMWCHALTWL*ATVTIL Trigger: CAAGATTGTAACCGTTGCCAAAAGCCAGGTGAGCGC...GTGGCACCACATGAGCCACTGGAGGTGTGTGAGCCAACAAAGACCTGGATTAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058093.6 |
||
| CDS-3UTR CAA 90 bp | CTAGAGCTAAGGATGGGACAGTGGAGAGATACCAGGTCCTCTTGGCTACAGAAGAAACATTCCTTGGCCTaGGGACAGCTGACGGGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: LELRMGQWRDTRSSWLQKKHSLA*GQLTGV Trigger: CACTCCCGTCAGCTGTCCCAAGGCCAAGGAATGTTT...CTTCTGTAGCCAAGAGGACCTGGTATCTCTCCACTGTCCCATCCTTAGCTCTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128384.3 |
||
| CDS-3UTR CAA 90 bp | TTATGGATGGCTAGAGCTAAGGATGGGACAGTGGAGAGATACCAGGTCCTCTTGGCCAGGAAACATTCCTaGGCCTTGGGACAGCTGACG | + |
|
Preference number: 5 (lower is better) Translates to: LWMARAKDGTVERYQVLLARKHS*ALGQLT Trigger: CGTCAGCTGTCCCAAGGCCAAGGAATGTTTCCTGGC...CAAGAGGACCTGGTATCTCTCCACTGTCCCATCCTTAGCTCTAGCCATCCATAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128384.3 |
||
| CDS TCA 90 bp | TGCCTGAGAGCAGGGCATACTGACACACATTCTTGTAGGGACAGCTaGTTAGTCTCTGGGCCCACAGCATGGGAAGAGAAAGACCAACCA | + |
|
Preference number: 5 (lower is better) Translates to: CLRAGHTDTHSCRDS*LVSGPTAWEEKDQP Trigger: TGGTTGGTCTTTCTCTTCCCATGCTGTGGGCCCAGAGACTAATCAGCTGTCCCTACAAGAATGTGTGTCAGTATGCCCTGCTCTCAGGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058093.6 |
||
| CDS CCA 90 bp | CAGCACCATCAACTTCAATCTCCTAAGAACGGAGTCTGCCTTGTCTaGCTGGATTCTGGGCTGCCAAGGGTTCTGGGCTTTGGATTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: QHHQLQSPKNGVCLV*LDSGLPRVLGFGLS Trigger: AGACAATCCAAAGCCCAGAACCCTTGGCAGCCCAGAATCCAGCCAGACAAGGCAGACTCCGTTCTTAGGAGATTGAAGTTGATGGTGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058093.6 ENSMUST00000128384.3 ENSMUST00000129773.2 |
||
| CDS-3UTR CAA 90 bp | GCTAGAGCTAAGGATGGGACAGTGGAGAGATACCAGGTCCTCTTGGCTACAGAAATTTCCCATGGGCTCTaGGCCCAGGTCTTTGTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: ARAKDGTVERYQVLLATEISHGL*AQVFVS Trigger: ACTCACAAAGACCTGGGCCAAGAGCCCATGGGAAAT...TTCTGTAGCCAAGAGGACCTGGTATCTCTCCACTGTCCCATCCTTAGCTCTAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058093.6 |
||
| CDS-3UTR CAA 90 bp | CTAAGGATGGGACAGTGGAGAGATACCAGGTCCTCTTGGCTACAGAAGGCTCAGTTGGAGGGTAATGGGTaGTGGATATGGAGACCACCT | + |
|
Preference number: 5 (lower is better) Translates to: LRMGQWRDTRSSWLQKAQLEGNG*WIWRPP Trigger: AGGTGGTCTCCATATCCACAACCCATTACCCTCCAA...CTGAGCCTTCTGTAGCCAAGAGGACCTGGTATCTCTCCACTGTCCCATCCTTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128384.3 |
||
| CDS-3UTR CAA 90 bp | CTAGAGCTAAGGATGGGACAGTGGAGAGATACCAGGTCCTCTTGGCTACAGAAGCTGCCAAGGTCCCCATaGGGTATACACTACCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LELRMGQWRDTRSSWLQKLPRSP*GIHYLS Trigger: AGAGAGGTAGTGTATACCCAATGGGGACCTTGGCAG...CTTCTGTAGCCAAGAGGACCTGGTATCTCTCCACTGTCCCATCCTTAGCTCTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128384.3 |
||
| CDS-3UTR CAA 90 bp | CACTTATGGATGGCTAGAGCTAAGGATGGGACAGTGGAGAGATACCAGGTCCTCTGTCTCCCACAGTTATaGCATCTCTGCCAAGGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: HLWMARAKDGTVERYQVLCLPQL*HLCQGP Trigger: GGGACCTTGGCAGAGATGCAATAACTGTGGGAGACA...GAGGACCTGGTATCTCTCCACTGTCCCATCCTTAGCTCTAGCCATCCATAAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128384.3 |
||
| CDS-3UTR CAA 90 bp | TTATGGATGGCTAGAGCTAAGGATGGGACAGTGGAGAGATACCAGGTCCTCTTGCACTTGAGTCGAGCATaGCTGTTGGGTTTGTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LWMARAKDGTVERYQVLLHLSRA*LLGLSS Trigger: GCTGGACAAACCCAACAGCAATGCTCGACTCAAGTG...CAAGAGGACCTGGTATCTCTCCACTGTCCCATCCTTAGCTCTAGCCATCCATAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058093.6 |
||
| CDS TCA 90 bp | ACTGCAGGTCGCTCCCAGGCAGTACCCTCCCATCAGGCTTGGAGTTaGCCAGGGACAGTTTGTCCTCTAAAGATGAAGAAAAATACCAAA | + |
|
Preference number: 5 (lower is better) Translates to: TAGRSQAVPSHQAWS*PGTVCPLKMKKNTK Trigger: TTTGGTATTTTTCTTCATCTTTAGAGGACAAACTGTCCCTGGTCAACTCCAAGCCTGATGGGAGGGTACTGCCTGGGAGCGACCTGCAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058093.6 |
||
| CDS GCA 90 bp | AATACCAAAGTGCTTTGGGGTAGTTACACTGCAGTATCACGTCACTaGCTGAGAGCAGGGCATACTGACACACATTCTTGTAGGGACAGC | + |
|
Preference number: 5 (lower is better) Translates to: NTKVLWGSYTAVSRH*LRAGHTDTHSCRDS Trigger: GCTGTCCCTACAAGAATGTGTGTCAGTATGCCCTGCTCTCAGGCAGTGACGTGATACTGCAGTGTAACTACCCCAAAGCACTTTGGTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058093.6 |
||
| CDS CCA 90 bp | AATAACCAGTTTGTATCGGAGATAGTGCATTCCAAGAGCACATCATaGCTGGAGAGGAGAGCCAGGAAACATTCCTTGGCCTTGGGACAG | + |
|
Preference number: 5 (lower is better) Translates to: NNQFVSEIVHSKSTS*LERRARKHSLALGQ Trigger: CTGTCCCAAGGCCAAGGAATGTTTCCTGGCTCTCCTCTCCAGCCATGATGTGCTCTTGGAATGCACTATCTCCGATACAAACTGGTTATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128384.3 |
||
| CDS-3UTR CAA 90 bp | TTATGGATGGCTAGAGCTAAGGATGGGACAGTGGAGAGATACCAGGTCCTCTTGGTAAAAACAAGAACCTaGCCTCCCAGGTTCATGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LWMARAKDGTVERYQVLLVKTRT*PPRFML Trigger: GAGCATGAACCTGGGAGGCAAGGTTCTTGTTTTTAC...CAAGAGGACCTGGTATCTCTCCACTGTCCCATCCTTAGCTCTAGCCATCCATAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058093.6 |
||
| CDS-3UTR CAA 90 bp | AGAGCTAAGGATGGGACAGTGGAGAGATACCAGGTCCTCTTGGCTACAGAAGGCGGGCTCTTTCTTATATaGGAAACACTGGATAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: RAKDGTVERYQVLLATEGGLFLI*ETLDRL Trigger: CAACCTATCCAGTGTTTCCAATATAAGAAAGAGCCC...GCCTTCTGTAGCCAAGAGGACCTGGTATCTCTCCACTGTCCCATCCTTAGCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128384.3 |
||
| CDS-3UTR CAA 90 bp | GCTAGAGCTAAGGATGGGACAGTGGAGAGATACCAGGTCCTCTTGGCTACAGAATTGACCAGGGACAGTTaGTCCTCTAAAGATGAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: ARAKDGTVERYQVLLATELTRDS*SSKDEE Trigger: TTCTTCATCTTTAGAGGACAAACTGTCCCTGGTCAA...TTCTGTAGCCAAGAGGACCTGGTATCTCTCCACTGTCCCATCCTTAGCTCTAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058093.6 |
||
| CDS-3UTR CAA 90 bp | GGATGGCTAGAGCTAAGGATGGGACAGTGGAGAGATACCAGGTCCTCTTGGCTACAGCTTGGTGATATCTaGGAAATCAATCTTGTAACT | + |
|
Preference number: 5 (lower is better) Translates to: GWLELRMGQWRDTRSSWLQLGDI*EINLVT Trigger: AGTTACAAGATTGATTTCCAAGATATCACCAAGCTG...TAGCCAAGAGGACCTGGTATCTCTCCACTGTCCCATCCTTAGCTCTAGCCATCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128384.3 |
||
| CDS CCA 72 bp | GGCTGGTTGGTCTCCGTGGCGGTGTCACAGGGTACCTaGCAGGCTTGTAGCTGGAGTTCAGGCCTCAGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: GWLVSVAVSQGT*QACSWSSGLRR Trigger: CCGCCTGAGGCCTGAACTCCAGCTACAAGCCTGCCAGGTACCCTGTGACACCGCCACGGAGACCAACCAGCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058093.6 |
||
| CDS TCA 72 bp | GGAGAGCCAGGAAACATTCCTTGGCCTTGGGACAGCTaGCGGGAGTGTGGGGCCCCAACACTGGGAGAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: GEPGNIPWPWDS*RECGAPTLGEQ Trigger: CTGCTCTCCCAGTGTTGGGGCCCCACACTCCCGTCAGCTGTCCCAAGGCCAAGGAATGTTTCCTGGCTCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128384.3 |
||
| CDS CCA 72 bp | CTTGGGACAGCTGACGGGAGTGTGGGGCCCCAACACTaGGAGAGCAGAGCTGAGCAGTGTCCACAGGATGGT | + |
|
Preference number: 6 (lower is better) Translates to: LGTADGSVGPQH*ESRAEQCPQDG Trigger: ACCATCCTGTGGACACTGCTCAGCTCTGCTCTCCCAGTGTTGGGGCCCCACACTCCCGTCAGCTGTCCCAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128384.3 |
||
| CDS CAA 72 bp | TGGCTGGAGAGGAGAGCCAGGAAACATTCCTTGGCCTaGGGACAGCTGACGGGAGTGTGGGGCCCCAACACT | + |
|
Preference number: 6 (lower is better) Translates to: WLERRARKHSLA*GQLTGVWGPNT Trigger: AGTGTTGGGGCCCCACACTCCCGTCAGCTGTCCCAAGGCCAAGGAATGTTTCCTGGCTCTCCTCTCCAGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128384.3 |
||
| CDS CAA 72 bp | ACATCATGGCTGGAGAGGAGAGCCAGGAAACATTCCTaGGCCTTGGGACAGCTGACGGGAGTGTGGGGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: TSWLERRARKHS*ALGQLTGVWGP Trigger: GGGGCCCCACACTCCCGTCAGCTGTCCCAAGGCCAAGGAATGTTTCCTGGCTCTCCTCTCCAGCCATGATGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128384.3 |
||
| CDS GCA 72 bp | ATGATGGTGCTGACCGTCTGGCCAGAGAGCTGGTCCTaGCATGTCAGAGGGCTGTTGTCAGCTTCCCAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: MMVLTVWPESWS*HVRGLLSASQW Trigger: CCACTGGGAAGCTGACAACAGCCCTCTGACATGGCAGGACCAGCTCTCTGGCCAGACGGTCAGCACCATCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058093.6 ENSMUST00000128384.3 |
||
| CDS CCA 72 bp | AGGTCCATGATGGTGCTGACCGTCTGGCCAGAGAGCTaGTCCTGCCATGTCAGAGGGCTGTTGTCAGCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: RSMMVLTVWPES*SCHVRGLLSAS Trigger: GGAAGCTGACAACAGCCCTCTGACATGGCAGGACCAGCTCTCTGGCCAGACGGTCAGCACCATCATGGACCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058093.6 ENSMUST00000128384.3 |
||
| CDS TCA 72 bp | AGAGCCCACAGGGTACAGGCTCCTCTAAGGGCTCCTTaGTGTAGCAGTAACCCAGGCGTTTGCGCTCTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: RAHRVQAPLRAP*CSSNPGVCALP Trigger: AGGGAGAGCGCAAACGCCTGGGTTACTGCTACATCAAGGAGCCCTTAGAGGAGCCTGTACCCTGTGGGCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128384.3 |
||
| CDS CCA 72 bp | AGGCTTGTAGCTGGAGTTCAGGCCTCAGGCGGCTGTTaGTCACCTTCTCCTCTCTCAGGTAGAGCCAGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: RLVAGVQASGGC*SPSPLSGRASK Trigger: CTTGCTGGCTCTACCTGAGAGAGGAGAAGGTGACCAACAGCCGCCTGAGGCCTGAACTCCAGCTACAAGCCT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058093.6 |
||
| CDS CAA 90 bp | CTTGTCTGGCTGGATTCTGGGCTGCCAAGGGTTCTGGGCTTTGGATaGTCTCTCAGTGGGGTTGAACTGGGCTATGAGCTCCTGCTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: LVWLDSGLPRVLGFG*SLSGVELGYELLLH Trigger: GTGGAGCAGGAGCTCATAGCCCAGTTCAACCCCACTGAGAGACAATCCAAAGCCCAGAACCCTTGGCAGCCCAGAATCCAGCCAGACAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058093.6 ENSMUST00000128384.3 ENSMUST00000129773.2 |
||
| CDS CCA 72 bp | CCAGCAGATATGTGTCAAAGACAAAGTACGGCTGGTTaGTCTCCGTGGCGGTGTCACAGGGTACCTGGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: PADMCQRQSTAG*SPWRCHRVPGR Trigger: CCTGCCAGGTACCCTGTGACACCGCCACGGAGACCAACCAGCCGTACTTTGTCTTTGACACATATCTGCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058093.6 |
||
| CDS CCA 72 bp | GCCTTGTCTGGCTGGATTCTGGGCTGCCAAGGGTTCTaGGCTTTGGATTGTCTCTCAGTGGGGTTGAACTGG | + |
|
Preference number: 6 (lower is better) Translates to: ALSGWILGCQGF*ALDCLSVGLNW Trigger: CCAGTTCAACCCCACTGAGAGACAATCCAAAGCCCAGAACCCTTGGCAGCCCAGAATCCAGCCAGACAAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058093.6 ENSMUST00000128384.3 ENSMUST00000129773.2 |
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| CDS CCA 72 bp | TCACCTTCTCCTCTCTCAGGTAGAGCCAGCAAGGCATaGGCTTTTCTTGGGGCTCCTCCACATAGCAGTAGC | + |
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Preference number: 6 (lower is better) Translates to: SPSPLSGRASKA*AFLGAPPHSSS Trigger: GCTACTGCTATGTGGAGGAGCCCCAAGAAAAGCCCATGCCTTGCTGGCTCTACCTGAGAGAGGAGAAGGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058093.6 |
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| CDS CAA 72 bp | TGCAGGTCGCTCCCAGGCAGTACCCTCCCATCAGGCTaGGAGTTGACCAGGGACAGTTTGTCCTCTAAAGAT | + |
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Preference number: 6 (lower is better) Translates to: CRSLPGSTLPSG*ELTRDSLSSKD Trigger: ATCTTTAGAGGACAAACTGTCCCTGGTCAACTCCAAGCCTGATGGGAGGGTACTGCCTGGGAGCGACCTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058093.6 |
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| CDS CAA 72 bp | TCCAGCAGATATGTGTCAAAGACAAAGTACGGCTGGTaGGTCTCCGTGGCGGTGTCACAGGGTACCTGGCAG | + |
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Preference number: 6 (lower is better) Translates to: SSRYVSKTKYGW*VSVAVSQGTWQ Trigger: CTGCCAGGTACCCTGTGACACCGCCACGGAGACCAACCAGCCGTACTTTGTCTTTGACACATATCTGCTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058093.6 |
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| CDS CAA 72 bp | TCTGGCTGGATTCTGGGCTGCCAAGGGTTCTGGGCTTaGGATTGTCTCTCAGTGGGGTTGAACTGGGCTATG | + |
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Preference number: 6 (lower is better) Translates to: SGWILGCQGFWA*DCLSVGLNWAM Trigger: CATAGCCCAGTTCAACCCCACTGAGAGACAATCCAAAGCCCAGAACCCTTGGCAGCCCAGAATCCAGCCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058093.6 ENSMUST00000128384.3 ENSMUST00000129773.2 |
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| CDS CAA 90 bp | TTGGGTTTGTCCAGCAGATATGTGTCAAAGACAAAGTACGGCTGGTaGGTCTCCGTGGCGGTGTCACAGGGTACCTGGCAGGCTTGTAGC | + |
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Preference number: 6 (lower is better) Translates to: LGLSSRYVSKTKYGW*VSVAVSQGTWQACS Trigger: GCTACAAGCCTGCCAGGTACCCTGTGACACCGCCACGGAGACCAACCAGCCGTACTTTGTCTTTGACACATATCTGCTGGACAAACCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058093.6 |
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| CDS GCA 72 bp | CCAGGCGTTTGCGCTCTCCCTGTCTCCCACAGTTATTaGATCTCTGCCAAGGTCCCCATTGGGTATACACTA | + |
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Preference number: 6 (lower is better) Translates to: PGVCALPVSHSY*ISAKVPIGYTL Trigger: TAGTGTATACCCAATGGGGACCTTGGCAGAGATGCAATAACTGTGGGAGACAGGGAGAGCGCAAACGCCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128384.3 |
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| CDS CCA 72 bp | TTGTCCAGCAGATATGTGTCAAAGACAAAGTACGGCTaGTTGGTCTCCGTGGCGGTGTCACAGGGTACCTGG | + |
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Preference number: 6 (lower is better) Translates to: LSSRYVSKTKYG*LVSVAVSQGTW Trigger: CCAGGTACCCTGTGACACCGCCACGGAGACCAACCAGCCGTACTTTGTCTTTGACACATATCTGCTGGACAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058093.6 |
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| CDS TCA 72 bp | CGCTCCCAGGCAGTACCCTCCCATCAGGCTTGGAGTTaGCCAGGGACAGTTTGTCCTCTAAAGATGAAGAAA | + |
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Preference number: 6 (lower is better) Translates to: RSQAVPSHQAWS*PGTVCPLKMKK Trigger: TTTCTTCATCTTTAGAGGACAAACTGTCCCTGGTCAACTCCAAGCCTGATGGGAGGGTACTGCCTGGGAGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058093.6 |
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| CDS TCA 72 bp | CCTGTAGATGGATGCGAAGGGACAGGTAAGCCGTGCTaGTCCGGACTCCTCTGTGAGCTTGAAGTTATCGAA | + |
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Preference number: 6 (lower is better) Translates to: PVDGCEGTGKPC*SGLLCELEVIE Trigger: TTCGATAACTTCAAGCTCACAGAGGAGTCCGGATCAGCACGGCTTACCTGTCCCTTCGCATCCATCTACAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128384.3 |
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| CDS CCA 72 bp | CAACTTCAATCTCCTAAGAACGGAGTCTGCCTTGTCTaGCTGGATTCTGGGCTGCCAAGGGTTCTGGGCTTT | + |
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Preference number: 6 (lower is better) Translates to: QLQSPKNGVCLV*LDSGLPRVLGF Trigger: AAAGCCCAGAACCCTTGGCAGCCCAGAATCCAGCCAGACAAGGCAGACTCCGTTCTTAGGAGATTGAAGTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058093.6 ENSMUST00000128384.3 ENSMUST00000129773.2 |
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| CDS CAA 72 bp | TCGCTCCCAGGCAGTACCCTCCCATCAGGCTTGGAGTaGACCAGGGACAGTTTGTCCTCTAAAGATGAAGAA | + |
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Preference number: 6 (lower is better) Translates to: SLPGSTLPSGLE*TRDSLSSKDEE Trigger: TTCTTCATCTTTAGAGGACAAACTGTCCCTGGTCAACTCCAAGCCTGATGGGAGGGTACTGCCTGGGAGCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058093.6 |
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| CDS CAA 72 bp | ATCGAAGATGACGTAGTCTCCACCCGTCAGATGACCTaGGCACCCCACAAAGCAGATTTCCACCTGCATCTC | + |
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Preference number: 6 (lower is better) Translates to: IEDDVVSTRQMT*APHKADFHLHL Trigger: GAGATGCAGGTGGAAATCTGCTTTGTGGGGTGCCAAGGTCATCTGACGGGTGGAGACTACGTCATCTTCGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128384.3 |
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| CDS CAA 90 bp | TCAGACAACTGCAGGTCGCTCCCAGGCAGTACCCTCCCATCAGGCTaGGAGTTGACCAGGGACAGTTTGTCCTCTAAAGATGAAGAAAAA | + |
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Preference number: 6 (lower is better) Translates to: SDNCRSLPGSTLPSG*ELTRDSLSSKDEEK Trigger: TTTTTCTTCATCTTTAGAGGACAAACTGTCCCTGGTCAACTCCAAGCCTGATGGGAGGGTACTGCCTGGGAGCGACCTGCAGTTGTCTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058093.6 |
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| CDS CAA 90 bp | AAGAACCTTGCCTCCCAGGTTCATGCTCTCATTTCCCATGGGCTCTaGGCCCAGGTCTTTGTGAGTGATGTGCAACAGAGCTATGTTCTG | + |
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Preference number: 6 (lower is better) Translates to: KNLASQVHALISHGL*AQVFVSDVQQSYVL Trigger: CAGAACATAGCTCTGTTGCACATCACTCACAAAGACCTGGGCCAAGAGCCCATGGGAAATGAGAGCATGAACCTGGGAGGCAAGGTTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058093.6 |
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| CDS TCA 72 bp | GCAGGGCATACTGACACACATTCTTGTAGGGACAGCTaGTTAGTCTCTGGGCCCACAGCATGGGAAGAGAAA | + |
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Preference number: 6 (lower is better) Translates to: AGHTDTHSCRDS*LVSGPTAWEEK Trigger: TTTCTCTTCCCATGCTGTGGGCCCAGAGACTAATCAGCTGTCCCTACAAGAATGTGTGTCAGTATGCCCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058093.6 |
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| CDS CCA 72 bp | TTCCATACTTGTCCAGGCATTGGTAGAGGCCCGTGTTaGAGGGTAATGGGTTGTGGATATGGAGACCACCTT | + |
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Preference number: 6 (lower is better) Translates to: FHTCPGIGRGPC*RVMGCGYGDHL Trigger: AAGGTGGTCTCCATATCCACAACCCATTACCCTCCAACACGGGCCTCTACCAATGCCTGGACAAGTATGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128384.3 |
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| CDS CAA 90 bp | AACTGCAGGTCGCTCCCAGGCAGTACCCTCCCATCAGGCTTGGAGTaGACCAGGGACAGTTTGTCCTCTAAAGATGAAGAAAAATACCAA | + |
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Preference number: 6 (lower is better) Translates to: NCRSLPGSTLPSGLE*TRDSLSSKDEEKYQ Trigger: TTGGTATTTTTCTTCATCTTTAGAGGACAAACTGTCCCTGGTCAACTCCAAGCCTGATGGGAGGGTACTGCCTGGGAGCGACCTGCAGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058093.6 |
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| CDS CAA 90 bp | CTCTCCCTGTCTCCCACAGTTATTGCATCTCTGCCAAGGTCCCCATaGGGTATACACTACCTCTCTGTGACTCAGGTTCAGTGTCTCATT | + |
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Preference number: 6 (lower is better) Translates to: LSLSPTVIASLPRSP*GIHYLSVTQVQCLI Trigger: AATGAGACACTGAACCTGAGTCACAGAGAGGTAGTGTATACCCAATGGGGACCTTGGCAGAGATGCAATAACTGTGGGAGACAGGGAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128384.3 |
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| CDS TCA 72 bp | TTTGGGGTAGTTACACTGCAGTATCACGTCACTGCCTaGGAGCAGGGCATACTGACACACATTCTTGTAGGG | + |
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Preference number: 6 (lower is better) Translates to: FGVVTLQYHVTA*EQGILTHILVG Trigger: CCCTACAAGAATGTGTGTCAGTATGCCCTGCTCTCAGGCAGTGACGTGATACTGCAGTGTAACTACCCCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058093.6 |
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| CDS TCA 72 bp | TGCCAAGGTCCCCATTGGGTATACACTACCTCTCTGTaGCTCAGGTTCAGTGTCTCATTCATTAGGGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: CQGPHWVYTTSL*LRFSVSFIRGF Trigger: GAAGCCCCTAATGAATGAGACACTGAACCTGAGTCACAGAGAGGTAGTGTATACCCAATGGGGACCTTGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128384.3 |
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| CDS GCA 72 bp | GTGCTTTGGGGTAGTTACACTGCAGTATCACGTCACTaGCTGAGAGCAGGGCATACTGACACACATTCTTGT | + |
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Preference number: 6 (lower is better) Translates to: VLWGSYTAVSRH*LRAGHTDTHSC Trigger: ACAAGAATGTGTGTCAGTATGCCCTGCTCTCAGGCAGTGACGTGATACTGCAGTGTAACTACCCCAAAGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058093.6 |
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| CDS GCA 72 bp | TTGCGCTCACCTGGCTTTTGGCAACGGTTACAATCTTaGCAAGGATCCCAGCGGGTAAAAACAAGAACCTTG | + |
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Preference number: 6 (lower is better) Translates to: LRSPGFWQRLQS*QGSQRVKTRTL Trigger: CAAGGTTCTTGTTTTTACCCGCTGGGATCCTTGGCAAGATTGTAACCGTTGCCAAAAGCCAGGTGAGCGCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058093.6 |
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| CDS CAA 72 bp | TCTCCCACAGTTATTGCATCTCTGCCAAGGTCCCCATaGGGTATACACTACCTCTCTGTGACTCAGGTTCAG | + |
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Preference number: 6 (lower is better) Translates to: SPTVIASLPRSP*GIHYLSVTQVQ Trigger: CTGAACCTGAGTCACAGAGAGGTAGTGTATACCCAATGGGGACCTTGGCAGAGATGCAATAACTGTGGGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128384.3 |
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| CDS CAA 90 bp | AATGGGTTGTGGATATGGAGACCACCTTCTGGGCTCTTTCTTATATaGGAAACACTGGATAGGTTGACGGGCTTACCACCTCCACTGAGC | + |
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Preference number: 6 (lower is better) Translates to: NGLWIWRPPSGLFLI*ETLDRLTGLPPPLS Trigger: GCTCAGTGGAGGTGGTAAGCCCGTCAACCTATCCAGTGTTTCCAATATAAGAAAGAGCCCAGAAGGTGGTCTCCATATCCACAACCCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128384.3 |
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| CDS CAA 90 bp | ATGCAGCTTGGTGATATCTTGGAAATCAATCTTGTAACTGGTCACTaGGGTTCCATACTTGTCCAGGCATTGGTAGAGGCCCGTGTTGGA | + |
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Preference number: 6 (lower is better) Translates to: MQLGDILEINLVTGH*GSILVQALVEARVG Trigger: TCCAACACGGGCCTCTACCAATGCCTGGACAAGTATGGAACCCAAGTGACCAGTTACAAGATTGATTTCCAAGATATCACCAAGCTGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128384.3 |
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| CDS CAA 72 bp | ATGGAAGCCAAGGGACACTTGAGTCGAGCATTGCTGTaGGGTTTGTCCAGCAGATATGTGTCAAAGACAAAG | + |
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Preference number: 6 (lower is better) Translates to: MEAKGHLSRALL*GLSSRYVSKTK Trigger: CTTTGTCTTTGACACATATCTGCTGGACAAACCCAACAGCAATGCTCGACTCAAGTGTCCCTTGGCTTCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058093.6 |
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| CDS CAA 72 bp | TCTGGGCTCTTTCTTATATTGGAAACACTGGATAGGTaGACGGGCTTACCACCTCCACTGAGCCTAGAGAAT | + |
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Preference number: 6 (lower is better) Translates to: SGLFLILETLDR*TGLPPPLSLEN Trigger: ATTCTCTAGGCTCAGTGGAGGTGGTAAGCCCGTCAACCTATCCAGTGTTTCCAATATAAGAAAGAGCCCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128384.3 |
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| CDS CAA 72 bp | GGTGATATCTTGGAAATCAATCTTGTAACTGGTCACTaGGGTTCCATACTTGTCCAGGCATTGGTAGAGGCC | + |
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Preference number: 6 (lower is better) Translates to: GDILEINLVTGH*GSILVQALVEA Trigger: GGCCTCTACCAATGCCTGGACAAGTATGGAACCCAAGTGACCAGTTACAAGATTGATTTCCAAGATATCACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128384.3 |
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