Pregenerated sensors for FAM172A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000064138Ensembl transcript IDs: ENSMUST00000091459.12, ENSMUST00000099358.5, ENSMUST00000163257.9, ENSMUST00000224217.2
Found 132 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGGCTACGGGCGGCGGGCGGGCGGCTGCGCGCTCACAGCTCCTCGTaGTTGATCCGGTGCGAGCGCCGCGTCAGGGCCGGCTTCTGCGAG | + |
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Preference number: 1 (lower is better) Translates to: RLRAAGGRLRAHSSS*LIRCERRVRAGFCE Trigger: CTCGCAGAAGCCGGCCCTGACGCGGCGCTCGCACCGGATCAAGCACGAGGAGCTGTGAGCGCGCAGCCGCCCGCCCGCCGCCCGTAGCCT 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224217.2 |
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| 3UTR GCA 90 bp | GCGGGCGGGCGGCTGCGCGCTCACAGCTCCTCGTGCTTGATCCGGTaGGAGCGCCGCGTCAGGGCCGGCTTCTGCGAGCTGCTCTTGGCC | + |
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Preference number: 1 (lower is better) Translates to: AGGRLRAHSSSCLIR*ERRVRAGFCELLLA Trigger: GGCCAAGAGCAGCTCGCAGAAGCCGGCCCTGACGCGGCGCTCGCACCGGATCAAGCACGAGGAGCTGTGAGCGCGCAGCCGCCCGCCCGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224217.2 |
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| 3UTR GCA 90 bp | TCCTCGTGCTTGATCCGGTGCGAGCGCCGCGTCAGGGCCGGCTTCTaGGAGCTGCTCTTGGCCTCCGAGGCTTCCGCGAAGAACTTGAAG | + |
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Preference number: 1 (lower is better) Translates to: SSCLIRCERRVRAGF*ELLLASEASAKNLK Trigger: CTTCAAGTTCTTCGCGGAAGCCTCGGAGGCCAAGAGCAGCTCGCAGAAGCCGGCCCTGACGCGGCGCTCGCACCGGATCAAGCACGAGGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224217.2 |
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| 3UTR GCA 90 bp | AGACGGGAAGCTCTTCCAGGAAGTGAGCTCGTGACGGTCGGTGCCTaGAGACACTCTGGGACAGTCAGGCAGCATGGATTCCACCGATGT | + |
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Preference number: 1 (lower is better) Translates to: RREALPGSELVTVGA*RHSGTVRQHGFHRC Trigger: ACATCGGTGGAATCCATGCTGCCTGACTGTCCCAGAGTGTCTGCAGGCACCGACCGTCACGAGCTCACTTCCTGGAAGAGCTTCCCGTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224217.2 |
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| 3UTR CCA 90 bp | CGTGACGGTCGGTGCCTGCAGACACTCTGGGACAGTCAGGCAGCATaGATTCCACCGATGTATCTAATGGTTCTGAGCTGGAGACCCAGT | + |
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Preference number: 1 (lower is better) Translates to: RDGRCLQTLWDSQAA*IPPMYLMVLSWRPS Trigger: ACTGGGTCTCCAGCTCAGAACCATTAGATACATCGGTGGAATCCATGCTGCCTGACTGTCCCAGAGTGTCTGCAGGCACCGACCGTCACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224217.2 |
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| 3UTR TCA 90 bp | AAGAACTTGAAGATAGACGGGAAGCTCTTCCAGGAAGTGAGCTCGTaGCGGTCGGTGCCTGCAGACACTCTGGGACAGTCAGGCAGCATG | + |
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Preference number: 1 (lower is better) Translates to: KNLKIDGKLFQEVSS*RSVPADTLGQSGSM Trigger: CATGCTGCCTGACTGTCCCAGAGTGTCTGCAGGCACCGACCGTCACGAGCTCACTTCCTGGAAGAGCTTCCCGTCTATCTTCAAGTTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224217.2 |
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| 3UTR CCA 90 bp | AGAATCATTTGTCACTCATCAGCTGGTGATCTGGGGTGCTGCGCCTaGCTCCCTCTGGGTTGCTATAGCACAGATTCAAAAGTAGTAACA | + |
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Preference number: 1 (lower is better) Translates to: RIICHSSAGDLGCCA*LPLGCYSTDSKVVT Trigger: TGTTACTACTTTTGAATCTGTGCTATAGCAACCCAGAGGGAGCCAGGCGCAGCACCCCAGATCACCAGCTGATGAGTGACAAATGATTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091459.12 |
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| 3UTR CCA 90 bp | ATCCTACATTGTAAAGAATCATTTGTCACTCATCAGCTGGTGATCTaGGGTGCTGCGCCTGGCTCCCTCTGGGTTGCTATAGCACAGATT | + |
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Preference number: 1 (lower is better) Translates to: ILHCKESFVTHQLVI*GAAPGSLWVAIAQI Trigger: AATCTGTGCTATAGCAACCCAGAGGGAGCCAGGCGCAGCACCCCAGATCACCAGCTGATGAGTGACAAATGATTCTTTACAATGTAGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091459.12 |
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| 3UTR CCA 90 bp | AGTCAGGCAGCATGGATTCCACCGATGTATCTAATGGTTCTGAGCTaGAGACCCAGTTACAACAGTTCTCTCTCATCCATTCTCGGATGG | + |
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Preference number: 1 (lower is better) Translates to: SQAAWIPPMYLMVLS*RPSYNSSLSSILGW Trigger: CCATCCGAGAATGGATGAGAGAGAACTGTTGTAACTGGGTCTCCAGCTCAGAACCATTAGATACATCGGTGGAATCCATGCTGCCTGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224217.2 |
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| 3UTR TCA 90 bp | CCAGTGACAGTAAAGTACTCATCCCAAGGAAACAGAGACTTTCTCTaGATAAGGTTTAAGAGTTGCAGAGAGGAACCCGGAGGGCAGGAG | + |
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Preference number: 1 (lower is better) Translates to: PVTVKYSSQGNRDFL*IRFKSCREEPGGQE Trigger: CTCCTGCCCTCCGGGTTCCTCTCTGCAACTCTTAAACCTTATTCAGAGAAAGTCTCTGTTTCCTTGGGATGAGTACTTTACTGTCACTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091459.12 |
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| 3UTR GCA 90 bp | AGACCCAGTTACAACAGTTCTCTCTCATCCATTCTCGGATGGTTTTaGCAGCTTCTTGATGCCACACATTGTGAACAGAGTCTGTCAATG | + |
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Preference number: 1 (lower is better) Translates to: RPSYNSSLSSILGWF*QLLDATHCEQSLSM Trigger: CATTGACAGACTCTGTTCACAATGTGTGGCATCAAGAAGCTGGCAAAACCATCCGAGAATGGATGAGAGAGAACTGTTGTAACTGGGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224217.2 |
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| 3UTR TCA 90 bp | GCAGGGTACTGCCAAGTGCTTGTTGTTATCCCAAGAAAGCTGAGGTaGATAACATCCTTACACATATACCAACAGCAACCCAATCAACAG | + |
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Preference number: 1 (lower is better) Translates to: AGYCQVLVVIPRKLR*ITSLHIYQQQPNQQ Trigger: CTGTTGATTGGGTTGCTGTTGGTATATGTGTAAGGATGTTATTCACCTCAGCTTTCTTGGGATAACAACAAGCACTTGGCAGTACCCTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091459.12 |
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| 3UTR GCA 90 bp | TTTTGGTTTTTCCTAAGGTACTTCTGCCTAAGTAATGTCAGGAGATaGCCAGCCATGGCACTGAGGACTTTACTGTCCTTACAGAATTAC | + |
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Preference number: 1 (lower is better) Translates to: FWFFLRYFCLSNVRR*PAMALRTLLSLQNY Trigger: GTAATTCTGTAAGGACAGTAAAGTCCTCAGTGCCATGGCTGGGCATCTCCTGACATTACTTAGGCAGAAGTACCTTAGGAAAAACCAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091459.12 |
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| 3UTR TCA 90 bp | TGCCCAGCCATGGCACTGAGGACTTTACTGTCCTTACAGAATTACTaGATGTATGCATGTGCAAAGAGCATGACATGTTACCAGTTTAAA | + |
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Preference number: 1 (lower is better) Translates to: CPAMALRTLLSLQNY*MYACAKSMTCYQFK Trigger: TTTAAACTGGTAACATGTCATGCTCTTTGCACATGCATACATTCAGTAATTCTGTAAGGACAGTAAAGTCCTCAGTGCCATGGCTGGGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091459.12 |
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| 3UTR TCA 90 bp | TACTGTCCTTACAGAATTACTGAATGTATGCATGTGCAAAGAGCATaGCATGTTACCAGTTTAAACCTTGCTAAAATCAGTTCATGGGAT | + |
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Preference number: 1 (lower is better) Translates to: YCPYRITECMHVQRA*HVTSLNLAKISSWD Trigger: ATCCCATGAACTGATTTTAGCAAGGTTTAAACTGGTAACATGTCATGCTCTTTGCACATGCATACATTCAGTAATTCTGTAAGGACAGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091459.12 |
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| 3UTR-3UTR CCA 90 bp | CAGCCTCGGTCGCCGGGGCCCACAGTGCGAGGCCCGGCTCAGCCGCAGGCAACTTCTGCGAGCTGCTCTTaGCCTCCGAGGCTTCCGCGA | + |
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Preference number: 2 (lower is better) Translates to: QPRSPGPTVRGPAQPQATSASCS*PPRLPR Trigger: TCGCGGAAGCCTCGGAGGCCAAGAGCAGCTCGCAGA...AGTTGCCTGCGGCTGAGCCGGGCCTCGCACTGTGGGCCCCGGCGACCGAGGCTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224217.2 |
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| 3UTR-3UTR GCA 90 bp | CTCCCGGCGCTTTCAGCCTCGGTCGCCGGGGCCCACAGTGCGAGGCCCGGCTCACCGCTGAAGCCATATTaGTTTGACAGTTGCACTCAT | + |
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Preference number: 2 (lower is better) Translates to: LPALSASVAGAHSARPGSPLKPY*FDSCTH Trigger: ATGAGTGCAACTGTCAAAGCAATATGGCTTCAGCGG...TGAGCCGGGCCTCGCACTGTGGGCCCCGGCGACCGAGGCTGAAAGCGCCGGGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000091459.12 ENSMUST00000099358.5 ENSMUST00000224217.2 |
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| 3UTR-3UTR TCA 90 bp | CTGCGAGCTGCTCTTGGCCTCCGAGGCTTCCGCGAAGAACTTGAAGATAGACGGCAGGAAGTGAGCTCGTaGCGGTCGGTGCCTGCAGAC | + |
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Preference number: 2 (lower is better) Translates to: LRAALGLRGFREELEDRRQEVSS*RSVPAD Trigger: GTCTGCAGGCACCGACCGTCACGAGCTCACTTCCTG...CCGTCTATCTTCAAGTTCTTCGCGGAAGCCTCGGAGGCCAAGAGCAGCTCGCAG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224217.2 |
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| 3UTR-3UTR GCA 90 bp | TCAGCCTCGGTCGCCGGGGCCCACAGTGCGAGGCCCGGCTCAGCCGCAGGCAACTCTCCTTTTGAGGGTTaGGGTACTTCTCATAGAAAT | + |
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Preference number: 2 (lower is better) Translates to: SASVAGAHSARPGSAAGNSPFEG*GTSHRN Trigger: ATTTCTATGAGAAGTACCGCAACCCTCAAAAGGAGA...GTTGCCTGCGGCTGAGCCGGGCCTCGCACTGTGGGCCCCGGCGACCGAGGCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224217.2 |
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| 3UTR-3UTR TCA 90 bp | TGCGAGCGCCGCGTCAGGGCCGGCTTCTGCGAGCTGCTCTTGGCCTCCGAGGCTATTTCTTTCTCCTTTTaGGGGTTGCGGTACTTCTCA | + |
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Preference number: 2 (lower is better) Translates to: CERRVRAGFCELLLASEAISFSF*GLRYFS Trigger: TGAGAAGTACCGCAACCCTCAAAAGGAGAAAGAAAT...AGCCTCGGAGGCCAAGAGCAGCTCGCAGAAGCCGGCCCTGACGCGGCGCTCGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224217.2 |
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| 3UTR-3UTR TCA 90 bp | CTGCGAGCTGCTCTTGGCCTCCGAGGCTTCCGCGAAGAACTTGAAGATAGACGGAGCTCTTCCAGGAAGTaGGCTCGTGACGGTCGGTGC | + |
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Preference number: 2 (lower is better) Translates to: LRAALGLRGFREELEDRRSSSRK*ARDGRC Trigger: GCACCGACCGTCACGAGCTCACTTCCTGGAAGAGCT...CCGTCTATCTTCAAGTTCTTCGCGGAAGCCTCGGAGGCCAAGAGCAGCTCGCAG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224217.2 |
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| 3UTR-3UTR GCA 90 bp | CCTCGGTCGCCGGGGCCCACAGTGCGAGGCCCGGCTCAGCCGCAGGCAACTCGGCTTACTTTTTACATCTaGTTCTCGTTGAATCATCAG | + |
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Preference number: 2 (lower is better) Translates to: PRSPGPTVRGPAQPQATRLTFYI*FSLNHQ Trigger: CTGATGATTCAACGAGAAGCAGATGTAAAAAGTAAG...CCGAGTTGCCTGCGGCTGAGCCGGGCCTCGCACTGTGGGCCCCGGCGACCGAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000224217.2 |
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| 3UTR-3UTR CCA 90 bp | GGCCTCCGAGGCTTCCGCGAAGAACTTGAAGATAGACGGGAAGCTCTTCCAGGATGCCTGCAGACACTCTaGGACAGTCAGGCAGCATGG | + |
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Preference number: 2 (lower is better) Translates to: GLRGFREELEDRREALPGCLQTL*DSQAAW Trigger: CCATGCTGCCTGACTGTCCCAGAGTGTCTGCAGGCA...TCCTGGAAGAGCTTCCCGTCTATCTTCAAGTTCTTCGCGGAAGCCTCGGAGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224217.2 |
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| 3UTR-3UTR TCA 90 bp | GGCCTCCGAGGCTTCCGCGAAGAACTTGAAGATAGACGGGAAGCTCTTCCAGGACCCACTGACCTGCCCTaGCAACACCACTACCATGAA | + |
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Preference number: 2 (lower is better) Translates to: GLRGFREELEDRREALPGPTDLP*QHHYHE Trigger: TTCATGGTAGTGGTGTTGTCAGGGCAGGTCAGTGGG...TCCTGGAAGAGCTTCCCGTCTATCTTCAAGTTCTTCGCGGAAGCCTCGGAGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224217.2 |
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| 3UTR-3UTR GCA 90 bp | GGAAGTGAGCTCGTGACGGTCGGTGCCTGCAGACACTCTGGGACAGTCAGGCAGCCGCTGAAGCCATATTaGTTTGACAGTTGCACTCAT | + |
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Preference number: 2 (lower is better) Translates to: GSELVTVGACRHSGTVRQPLKPY*FDSCTH Trigger: ATGAGTGCAACTGTCAAAGCAATATGGCTTCAGCGG...CTGCCTGACTGTCCCAGAGTGTCTGCAGGCACCGACCGTCACGAGCTCACTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224217.2 |
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| 3UTR-3UTR GCA 90 bp | CTGCGAGCTGCTCTTGGCCTCCGAGGCTTCCGCGAAGAACTTGAAGATAGACGGATTCTCGGATGGTTTTaGCAGCTTCTTGATGCCACA | + |
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Preference number: 2 (lower is better) Translates to: LRAALGLRGFREELEDRRILGWF*QLLDAT Trigger: TGTGGCATCAAGAAGCTGGCAAAACCATCCGAGAAT...CCGTCTATCTTCAAGTTCTTCGCGGAAGCCTCGGAGGCCAAGAGCAGCTCGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224217.2 |
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| 3UTR-3UTR GCA 90 bp | AATGGTTCTGAGCTGGAGACCCAGTTACAACAGTTCTCTCTCATCCATTCTCGGCCTTTCCCGCTTCCCTaGTGGCTCATCTGTACCATC | + |
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Preference number: 2 (lower is better) Translates to: NGSELETQLQQFSLIHSRPFPLP*WLICTI Trigger: GATGGTACAGATGAGCCAGCAGGGAAGCGGGAAAGG...CCGAGAATGGATGAGAGAGAACTGTTGTAACTGGGTCTCCAGCTCAGAACCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224217.2 |
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| 3UTR CAA 90 bp | CCTTTTGAGGGTTGCGGTACTTCTCATAGAAATCACGACGCTTCTTaGTTTCCTTGGAGACCTTATCTCTCCTTTCCCGCTTCCCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: PFEGCGTSHRNHDAS*FPWRPYLSFPASLL Trigger: CAGCAGGGAAGCGGGAAAGGAGAGATAAGGTCTCCAAGGAAACAAAGAAGCGTCGTGATTTCTATGAGAAGTACCGCAACCCTCAAAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224217.2 |
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| 3UTR-3UTR CCA 90 bp | TCCATTCTCGGATGGTTTTGCCAGCTTCTTGATGCCACACATTGTGAACAGAGTTTCCCGCTTCCCTGCTaGCTCATCTGTACCATCAGA | + |
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Preference number: 2 (lower is better) Translates to: SILGWFCQLLDATHCEQSFPLPC*LICTIR Trigger: TCTGATGGTACAGATGAGCCAGCAGGGAAGCGGGAA...ACTCTGTTCACAATGTGTGGCATCAAGAAGCTGGCAAAACCATCCGAGAATGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224217.2 |
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| 3UTR-3UTR CCA 90 bp | GGCCTCCGAGGCTTCCGCGAAGAACTTGAAGATAGACGGGAAGCTCTTCCAGGATATCTTGTGATGATTTaGCACCAGTATCAAGTCAAA | + |
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Preference number: 2 (lower is better) Translates to: GLRGFREELEDRREALPGYLVMI*HQYQVK Trigger: TTTGACTTGATACTGGTGCCAAATCATCACAAGATA...TCCTGGAAGAGCTTCCCGTCTATCTTCAAGTTCTTCGCGGAAGCCTCGGAGGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224217.2 |
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| 3UTR CAA 90 bp | ACAACAGTTCTCTCTCATCCATTCTCGGATGGTTTTGCCAGCTTCTaGATGCCACACATTGTGAACAGAGTCTGTCAATGCCACAGCAGT | + |
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Preference number: 2 (lower is better) Translates to: TTVLSHPFSDGFASF*MPHIVNRVCQCHSS Trigger: ACTGCTGTGGCATTGACAGACTCTGTTCACAATGTGTGGCATCAAGAAGCTGGCAAAACCATCCGAGAATGGATGAGAGAGAACTGTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224217.2 |
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| 3UTR-3UTR GCA 90 bp | AGAAATATTAACCCTGGCCTCCCTGTAGGCAGGGTACTGCCAAGTGCTTGTTGTATCACAATCTCACCATaGACTGGATATAACCTTCAC | + |
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Preference number: 2 (lower is better) Translates to: RNINPGLPVGRVLPSACCITISP*TGYNLH Trigger: GTGAAGGTTATATCCAGTGCATGGTGAGATTGTGAT...ACAACAAGCACTTGGCAGTACCCTGCCTACAGGGAGGCCAGGGTTAATATTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091459.12 |
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| 3UTR-3UTR TCA 90 bp | TACAGGGCAGCGCCCTATCACAGGAAGAGAACAGTAAACATTTTGGCCTCAAAATTCGACATTCCCTCCTaGAATCAGAGACATAAAGAC | + |
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Preference number: 2 (lower is better) Translates to: YRAAPYHRKRTVNILASKFDIPS*NQRHKD Trigger: GTCTTTATGTCTCTGATTTCAGGAGGGAATGTCGAA...TTTTGAGGCCAAAATGTTTACTGTTCTCTTCCTGTGATAGGGCGCTGCCCTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091459.12 ENSMUST00000099358.5 |
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| 3UTR-3UTR TCA 90 bp | GCAAAACGCTATTTAGACGGACACATCACGACCCTGCGCTGGAGAAAGAAAGCAACAACACCACTACCATaGATTAAAACCATCAGTTTC | + |
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Preference number: 2 (lower is better) Translates to: AKRYLDGHITTLRWRKKATTPLP*IKTISF Trigger: GAAACTGATGGTTTTAATTCATGGTAGTGGTGTTGT...TGCTTTCTTTCTCCAGCGCAGGGTCGTGATGTGTCCGTCTAAATAGCGTTTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224217.2 |
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| 3UTR-3UTR GCA 90 bp | GACAGAAGACAAGGTTACAATCCAGTGACAGTAAAGTACTCATCCCAAGGAAACATAAGGTTTAAGAGTTaGAGAGAGGAACCCGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: DRRQGYNPVTVKYSSQGNIRFKS*REEPGG Trigger: CCCTCCGGGTTCCTCTCTGCAACTCTTAAACCTTAT...GTTTCCTTGGGATGAGTACTTTACTGTCACTGGATTGTAACCTTGTCTTCTGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091459.12 |
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| 3UTR-3UTR GCA 90 bp | CAGGAAGAGAACAGTAAACATTTTGGCCTCAAAAGAGCAACCCATTCACACTACCCGCTGAAGCCATATTaGTTTGACAGTTGCACTCAT | + |
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Preference number: 2 (lower is better) Translates to: QEENSKHFGLKRATHSHYPLKPY*FDSCTH Trigger: ATGAGTGCAACTGTCAAAGCAATATGGCTTCAGCGG...GTAGTGTGAATGGGTTGCTCTTTTGAGGCCAAAATGTTTACTGTTCTCTTCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091459.12 ENSMUST00000099358.5 |
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| 3UTR-3UTR CCA 90 bp | CCCAAACTACATAGTCCATCATGTTCTGAATTTAAAGTTGGCATTTTTAGGACTCGTTGGCCTTACTGTTaGAATTACAGGGCAGCGCCC | + |
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Preference number: 2 (lower is better) Translates to: PKLHSPSCSEFKVGIFRTRWPYC*NYRAAP Trigger: GGGCGCTGCCCTGTAATTCCAACAGTAAGGCCAACG...AGTCCTAAAAATGCCAACTTTAAATTCAGAACATGATGGACTATGTAGTTTGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000091459.12 ENSMUST00000099358.5 |
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| 3UTR-3UTR TCA 90 bp | TACAGGGCAGCGCCCTATCACAGGAAGAGAACAGTAAACATTTTGGCCTCAAAAAACTGGAAAATTCACTaGACATGGAGACTTATACCT | + |
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Preference number: 2 (lower is better) Translates to: YRAAPYHRKRTVNILASKNWKIH*TWRLIP Trigger: AGGTATAAGTCTCCATGTTCAGTGAATTTTCCAGTT...TTTTGAGGCCAAAATGTTTACTGTTCTCTTCCTGTGATAGGGCGCTGCCCTGTA 42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000091459.12 ENSMUST00000099358.5 |
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| 3UTR-3UTR TCA 90 bp | TACAGGGCAGCGCCCTATCACAGGAAGAGAACAGTAAACATTTTGGCCTCAAAATTTTCCTACTGCAGATaGAAACTGAAGCACATTAAC | + |
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Preference number: 2 (lower is better) Translates to: YRAAPYHRKRTVNILASKFSYCR*KLKHIN Trigger: GTTAATGTGCTTCAGTTTTCATCTGCAGTAGGAAAA...TTTTGAGGCCAAAATGTTTACTGTTCTCTTCCTGTGATAGGGCGCTGCCCTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000091459.12 ENSMUST00000099358.5 |
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| 3UTR-3UTR TCA 90 bp | GACAGAAGACAAGGTTACAATCCAGTGACAGTAAAGTACTCATCCCAAGGAAACACTGCAGATGAAAACTaGAGCACATTAACCCTACTT | + |
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Preference number: 2 (lower is better) Translates to: DRRQGYNPVTVKYSSQGNTADEN*STLTLL Trigger: AAGTAGGGTTAATGTGCTTCAGTTTTCATCTGCAGT...GTTTCCTTGGGATGAGTACTTTACTGTCACTGGATTGTAACCTTGTCTTCTGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091459.12 |
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| 3UTR-3UTR CCA 90 bp | GTGCTTGACACTGTTGGAGTAACATATTTAAACTGCCCAAAAGCTGGAGAAAGCTTTTATCTTCCGCGTTaGCCTTACTGTTGGAATTAC | + |
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Preference number: 2 (lower is better) Translates to: VLDTVGVTYLNCPKAGESFYLPR*PYCWNY Trigger: GTAATTCCAACAGTAAGGCCAACGCGGAAGATAAAA...GCTTTCTCCAGCTTTTGGGCAGTTTAAATATGTTACTCCAACAGTGTCAAGCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091459.12 |
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| 3UTR-3UTR TCA 90 bp | GTGCTTGACACTGTTGGAGTAACATATTTAAACTGCCCAAAAGCTGGAGAAAGCTCCTTACAGAATTACTaGATGTATGCATGTGCAAAG | + |
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Preference number: 2 (lower is better) Translates to: VLDTVGVTYLNCPKAGESSLQNY*MYACAK Trigger: CTTTGCACATGCATACATTCAGTAATTCTGTAAGGA...GCTTTCTCCAGCTTTTGGGCAGTTTAAATATGTTACTCCAACAGTGTCAAGCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091459.12 |
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| 3UTR-3UTR GCA 90 bp | GACAGAAGACAAGGTTACAATCCAGTGACAGTAAAGTACTCATCCCAAGGAAACAACTCAGACTCATTTTaGTTATACTGTCTCAAGGTC | + |
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Preference number: 2 (lower is better) Translates to: DRRQGYNPVTVKYSSQGNNSDSF*LYCLKV Trigger: GACCTTGAGACAGTATAAGCAAAATGAGTCTGAGTT...GTTTCCTTGGGATGAGTACTTTACTGTCACTGGATTGTAACCTTGTCTTCTGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091459.12 |
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| 3UTR CAA 90 bp | GACTTCCAAGGACTGTGTGTTAGGTACCCGAAAAAGCTCCAAAGCTaGAATCAGACTATTTTGAATTTCCAATTTATGTCTCTTTCCATC | + |
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Preference number: 2 (lower is better) Translates to: DFQGLCVRYPKKLQS*NQTILNFQFMSLSI Trigger: GATGGAAAGAGACATAAATTGGAAATTCAAAATAGTCTGATTCAAGCTTTGGAGCTTTTTCGGGTACCTAACACACAGTCCTTGGAAGTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091459.12 |
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| 3UTR-3UTR TCA 90 bp | GTAAAATGTCAACTTATTTTATCTTCCGCGTTGGCCTTACTGTTGGAATTACAGTTCGACATTCCCTCCTaGAATCAGAGACATAAAGAC | + |
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Preference number: 2 (lower is better) Translates to: VKCQLILSSALALLLELQFDIPS*NQRHKD Trigger: GTCTTTATGTCTCTGATTTCAGGAGGGAATGTCGAA...CTGTAATTCCAACAGTAAGGCCAACGCGGAAGATAAAATAAGTTGACATTTTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091459.12 ENSMUST00000099358.5 |
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| 3UTR-3UTR CCA 90 bp | CCCAAACTACATAGTCCATCATGTTCTGAATTTAAAGTTGGCATTTTTAGGACTCAGAGACATAAAGACTaGAGTTCAACTGGGCACAAA | + |
|
Preference number: 2 (lower is better) Translates to: PKLHSPSCSEFKVGIFRTQRHKD*SSTGHK Trigger: TTTGTGCCCAGTTGAACTCCAGTCTTTATGTCTCTG...AGTCCTAAAAATGCCAACTTTAAATTCAGAACATGATGGACTATGTAGTTTGGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000091459.12 ENSMUST00000099358.5 |
||
| 3UTR-3UTR GCA 90 bp | CCCAAACTACATAGTCCATCATGTTCTGAATTTAAAGTTGGCATTTTTAGGACTCTGAATGTATGCATGTaGAAAGAGCATGACATGTTA | + |
|
Preference number: 2 (lower is better) Translates to: PKLHSPSCSEFKVGIFRTLNVCM*KEHDML Trigger: TAACATGTCATGCTCTTTGCACATGCATACATTCAG...AGTCCTAAAAATGCCAACTTTAAATTCAGAACATGATGGACTATGTAGTTTGGG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091459.12 |
||
| 3UTR GCA 72 bp | CCCGGCGCTTTCAGCCTCGGTCGCCGGGGCCCACAGTaGGAGGCCCGGCTCAGCCGCAGGCAACTCGGCCGC | + |
|
Preference number: 3 (lower is better) Translates to: PGAFSLGRRGPQ*EARLSRRQLGR Trigger: GCGGCCGAGTTGCCTGCGGCTGAGCCGGGCCTCGCACTGTGGGCCCCGGCGACCGAGGCTGAAAGCGCCGGG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000091459.12 ENSMUST00000099358.5 ENSMUST00000224217.2 |
||
| 3UTR GCA 72 bp | CGGCTGCGCGCTCACAGCTCCTCGTGCTTGATCCGGTaGGAGCGCCGCGTCAGGGCCGGCTTCTGCGAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: RLRAHSSSCLIR*ERRVRAGFCEL Trigger: CAGCTCGCAGAAGCCGGCCCTGACGCGGCGCTCGCACCGGATCAAGCACGAGGAGCTGTGAGCGCGCAGCCG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224217.2 |
||
| 3UTR-3UTR CAA 90 bp | CGGTCGCCGGGGCCCACAGTGCGAGGCCCGGCTCAGCCGCAGGCAACTCGGCCGAGAACAGTAAACATTTaGGCCTCAAAAGAGCAACCC | + |
|
Preference number: 3 (lower is better) Translates to: RSPGPTVRGPAQPQATRPRTVNI*ASKEQP Trigger: GGGTTGCTCTTTTGAGGCCAAAATGTTTACTGTTCT...CGGCCGAGTTGCCTGCGGCTGAGCCGGGCCTCGCACTGTGGGCCCCGGCGACCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091459.12 ENSMUST00000099358.5 |
||
| 3UTR-3UTR CAA 90 bp | CCTCGGTCGCCGGGGCCCACAGTGCGAGGCCCGGCTCAGCCGCAGGCAACTCGGATTTTATCTTCCGCGTaGGCCTTACTGTTGGAATTA | + |
|
Preference number: 3 (lower is better) Translates to: PRSPGPTVRGPAQPQATRILSSA*ALLLEL Trigger: TAATTCCAACAGTAAGGCCAACGCGGAAGATAAAAT...CCGAGTTGCCTGCGGCTGAGCCGGGCCTCGCACTGTGGGCCCCGGCGACCGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091459.12 ENSMUST00000099358.5 |
||
| 3UTR-3UTR CAA 90 bp | CAGCCTCGGTCGCCGGGGCCCACAGTGCGAGGCCCGGCTCAGCCGCAGGCAACTACCCTACTTGGACTTTaGGAAGAAAGAGGTTATGTA | + |
|
Preference number: 3 (lower is better) Translates to: QPRSPGPTVRGPAQPQATTLLGL*EERGYV Trigger: TACATAACCTCTTTCTTCCAAAAGTCCAAGTAGGGT...AGTTGCCTGCGGCTGAGCCGGGCCTCGCACTGTGGGCCCCGGCGACCGAGGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091459.12 ENSMUST00000099358.5 |
||
| 3UTR-3UTR CAA 90 bp | TCAGCCTCGGTCGCCGGGGCCCACAGTGCGAGGCCCGGCTCAGCCGCAGGCAACATTTTATCTTCCGCGTaGGCCTTACTGTTGGAATTA | + |
|
Preference number: 3 (lower is better) Translates to: SASVAGAHSARPGSAAGNILSSA*ALLLEL Trigger: TAATTCCAACAGTAAGGCCAACGCGGAAGATAAAAT...GTTGCCTGCGGCTGAGCCGGGCCTCGCACTGTGGGCCCCGGCGACCGAGGCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091459.12 ENSMUST00000099358.5 |
||
| 3UTR-3UTR CAA 90 bp | CAGCCTCGGTCGCCGGGGCCCACAGTGCGAGGCCCGGCTCAGCCGCAGGCAACTGTTCTGAATTTAAAGTaGGCATTTTTAGGACTCGAG | + |
|
Preference number: 3 (lower is better) Translates to: QPRSPGPTVRGPAQPQATVLNLK*AFLGLE Trigger: CTCGAGTCCTAAAAATGCCAACTTTAAATTCAGAAC...AGTTGCCTGCGGCTGAGCCGGGCCTCGCACTGTGGGCCCCGGCGACCGAGGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000091459.12 ENSMUST00000099358.5 ENSMUST00000224217.2 |
||
| 3UTR GCA 72 bp | GCTCTTCCAGGAAGTGAGCTCGTGACGGTCGGTGCCTaGAGACACTCTGGGACAGTCAGGCAGCATGGATTC | + |
|
Preference number: 3 (lower is better) Translates to: ALPGSELVTVGA*RHSGTVRQHGF Trigger: GAATCCATGCTGCCTGACTGTCCCAGAGTGTCTGCAGGCACCGACCGTCACGAGCTCACTTCCTGGAAGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224217.2 |
||
| 3UTR TCA 72 bp | AAGATAGACGGGAAGCTCTTCCAGGAAGTGAGCTCGTaGCGGTCGGTGCCTGCAGACACTCTGGGACAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: KIDGKLFQEVSS*RSVPADTLGQS Trigger: TGACTGTCCCAGAGTGTCTGCAGGCACCGACCGTCACGAGCTCACTTCCTGGAAGAGCTTCCCGTCTATCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224217.2 |
||
| 3UTR CCA 72 bp | CGGTGCCTGCAGACACTCTGGGACAGTCAGGCAGCATaGATTCCACCGATGTATCTAATGGTTCTGAGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: RCLQTLWDSQAA*IPPMYLMVLSW Trigger: CCAGCTCAGAACCATTAGATACATCGGTGGAATCCATGCTGCCTGACTGTCCCAGAGTGTCTGCAGGCACCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224217.2 |
||
| 3UTR GCA 72 bp | ATCATTTGTCACTCATCAGCTGGTGATCTGGGGTGCTaGGCCTGGCTCCCTCTGGGTTGCTATAGCACAGAT | + |
|
Preference number: 3 (lower is better) Translates to: IICHSSAGDLGC*AWLPLGCYSTD Trigger: ATCTGTGCTATAGCAACCCAGAGGGAGCCAGGCGCAGCACCCCAGATCACCAGCTGATGAGTGACAAATGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091459.12 |
||
| 3UTR CCA 72 bp | TGTCACTCATCAGCTGGTGATCTGGGGTGCTGCGCCTaGCTCCCTCTGGGTTGCTATAGCACAGATTCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: CHSSAGDLGCCA*LPLGCYSTDSK Trigger: TTTTGAATCTGTGCTATAGCAACCCAGAGGGAGCCAGGCGCAGCACCCCAGATCACCAGCTGATGAGTGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091459.12 |
||
| 3UTR TCA 72 bp | TACATTGTAAAGAATCATTTGTCACTCATCAGCTGGTaGTCTGGGGTGCTGCGCCTGGCTCCCTCTGGGTTG | + |
|
Preference number: 3 (lower is better) Translates to: YIVKNHLSLISW*SGVLRLAPSGL Trigger: CAACCCAGAGGGAGCCAGGCGCAGCACCCCAGATCACCAGCTGATGAGTGACAAATGATTCTTTACAATGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091459.12 |
||
| 3UTR TCA 72 bp | CCACAAAGAACACATTCTCAGCAGCAGCCTGGGCTATaGAATGGTCCCACACATAGACCGCATGCTCTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: PQRTHSQQQPGL*NGPTHRPHALQ Trigger: CTGAAGAGCATGCGGTCTATGTGTGGGACCATTTCATAGCCCAGGCTGCTGCTGAGAATGTGTTCTTTGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224217.2 |
||
| 3UTR GCA 72 bp | GGTGATCTGGGGTGCTGCGCCTGGCTCCCTCTGGGTTaGTATAGCACAGATTCAAAAGTAGTAACAGACATT | + |
|
Preference number: 3 (lower is better) Translates to: GDLGCCAWLPLG*YSTDSKVVTDI Trigger: AATGTCTGTTACTACTTTTGAATCTGTGCTATAGCAACCCAGAGGGAGCCAGGCGCAGCACCCCAGATCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091459.12 |
||
| 3UTR CCA 72 bp | TGTAAAGAATCATTTGTCACTCATCAGCTGGTGATCTaGGGTGCTGCGCCTGGCTCCCTCTGGGTTGCTATA | + |
|
Preference number: 3 (lower is better) Translates to: CKESFVTHQLVI*GAAPGSLWVAI Trigger: TATAGCAACCCAGAGGGAGCCAGGCGCAGCACCCCAGATCACCAGCTGATGAGTGACAAATGATTCTTTACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091459.12 |
||
| 3UTR-3UTR CAA 90 bp | CTGCGAGCTGCTCTTGGCCTCCGAGGCTTCCGCGAAGAACTTGAAGATAGACGGTACATCTGCTTCTCGTaGAATCATCAGTTCAACAAA | + |
|
Preference number: 3 (lower is better) Translates to: LRAALGLRGFREELEDRRYICFS*NHQFNK Trigger: TTTGTTGAACTGATGATTCAACGAGAAGCAGATGTA...CCGTCTATCTTCAAGTTCTTCGCGGAAGCCTCGGAGGCCAAGAGCAGCTCGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224217.2 |
||
| 3UTR GCA 72 bp | TTCCTAAGGTACTTCTGCCTAAGTAATGTCAGGAGATaGCCAGCCATGGCACTGAGGACTTTACTGTCCTTA | + |
|
Preference number: 3 (lower is better) Translates to: FLRYFCLSNVRR*PAMALRTLLSL Trigger: TAAGGACAGTAAAGTCCTCAGTGCCATGGCTGGGCATCTCCTGACATTACTTAGGCAGAAGTACCTTAGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091459.12 |
||
| 3UTR CCA 72 bp | GTCAACTTATTTTATCTTCCGCGTTGGCCTTACTGTTaGAATTACAGGGCAGCGCCCTATCACAGGAAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: VNLFYLPRWPYC*NYRAAPYHRKR Trigger: TCTCTTCCTGTGATAGGGCGCTGCCCTGTAATTCCAACAGTAAGGCCAACGCGGAAGATAAAATAAGTTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091459.12 ENSMUST00000099358.5 |
||
| 3UTR CCA 72 bp | CCCAGTTACAACAGTTCTCTCTCATCCATTCTCGGATaGTTTTGCCAGCTTCTTGATGCCACACATTGTGAA | + |
|
Preference number: 3 (lower is better) Translates to: PSYNSSLSSILG*FCQLLDATHCE Trigger: TTCACAATGTGTGGCATCAAGAAGCTGGCAAAACCATCCGAGAATGGATGAGAGAGAACTGTTGTAACTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224217.2 |
||
| 3UTR CCA 72 bp | GCATGGATTCCACCGATGTATCTAATGGTTCTGAGCTaGAGACCCAGTTACAACAGTTCTCTCTCATCCATT | + |
|
Preference number: 3 (lower is better) Translates to: AWIPPMYLMVLS*RPSYNSSLSSI Trigger: AATGGATGAGAGAGAACTGTTGTAACTGGGTCTCCAGCTCAGAACCATTAGATACATCGGTGGAATCCATGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224217.2 |
||
| 3UTR TCA 72 bp | TGCCAAGTGCTTGTTGTTATCCCAAGAAAGCTGAGGTaGATAACATCCTTACACATATACCAACAGCAACCC | + |
|
Preference number: 3 (lower is better) Translates to: CQVLVVIPRKLR*ITSLHIYQQQP Trigger: GGGTTGCTGTTGGTATATGTGTAAGGATGTTATTCACCTCAGCTTTCTTGGGATAACAACAAGCACTTGGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091459.12 |
||
| 3UTR GCA 72 bp | ACAGGTTGTAAGGATCAACAGCCACCACCATCACCCTaGATTGGCGCACACATCGTGTTATATATTTTAATA | + |
|
Preference number: 3 (lower is better) Translates to: TGCKDQQPPPSP*IGAHIVLYILI Trigger: TATTAAAATATATAACACGATGTGTGCGCCAATGCAGGGTGATGGTGGTGGCTGTTGATCCTTACAACCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091459.12 ENSMUST00000099358.5 |
||
| 3UTR CCA 72 bp | CATGTTACCAGTTTAAACCTTGCTAAAATCAGTTCATaGGATGAGAGTATTCCTCATGAGGTGGCTGAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: HVTSLNLAKISS*DESIPHEVAEL Trigger: GAGCTCAGCCACCTCATGAGGAATACTCTCATCCCATGAACTGATTTTAGCAAGGTTTAAACTGGTAACATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091459.12 |
||
| 3UTR GCA 72 bp | GTTTTCTTCCCTGTCATTAGCAACTCAGACTCATTTTaGTTATACTGTCTCAAGGTCTCAAACAAGGTAGAC | + |
|
Preference number: 3 (lower is better) Translates to: VFFPVISNSDSF*LYCLKVSNKVD Trigger: GTCTACCTTGTTTGAGACCTTGAGACAGTATAAGCAAAATGAGTCTGAGTTGCTAATGACAGGGAAGAAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091459.12 |
||
| 3UTR GCA 72 bp | TGTCAATGCCACAGCAGTCACCTTACTTTTTACATCTaGTTCTCGTTGAATCATCAGTTCAACAAAAGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: CQCHSSHLTFYI*FSLNHQFNKSK Trigger: CTTGCTTTTGTTGAACTGATGATTCAACGAGAAGCAGATGTAAAAAGTAAGGTGACTGCTGTGGCATTGACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000224217.2 |
||
| 3UTR TCA 72 bp | AAGATCTGTTTATATTTTCCTTTCGACATTCCCTCCTaGAATCAGAGACATAAAGACTGGAGTTCAACTGGG | + |
|
Preference number: 3 (lower is better) Translates to: KICLYFPFDIPS*NQRHKDWSSTG Trigger: CCCAGTTGAACTCCAGTCTTTATGTCTCTGATTTCAGGAGGGAATGTCGAAAGGAAAATATAAACAGATCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091459.12 ENSMUST00000099358.5 |
||
| 3UTR-3UTR CAA 90 bp | CCCGAAAAAGCTCCAAAGCTTGAATCAGACTATTTTGAATTTCCAATTTATGTCAGAACAGTAAACATTTaGGCCTCAAAAGAGCAACCC | + |
|
Preference number: 3 (lower is better) Translates to: PEKAPKLESDYFEFPIYVRTVNI*ASKEQP Trigger: GGGTTGCTCTTTTGAGGCCAAAATGTTTACTGTTCT...GACATAAATTGGAAATTCAAAATAGTCTGATTCAAGCTTTGGAGCTTTTTCGGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000091459.12 |
||
| 3UTR-3UTR CAA 90 bp | CCCGAAAAAGCTCCAAAGCTTGAATCAGACTATTTTGAATTTCCAATTTATGTCGGAGAAAGCCCCATTTaGGTTTTTCCTAAGGTACTT | + |
|
Preference number: 3 (lower is better) Translates to: PEKAPKLESDYFEFPIYVGESPI*VFPKVL Trigger: AAGTACCTTAGGAAAAACCAAAATGGGGCTTTCTCC...GACATAAATTGGAAATTCAAAATAGTCTGATTCAAGCTTTGGAGCTTTTTCGGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000091459.12 |
||
| 3UTR-3UTR CAA 90 bp | CCCAAACTACATAGTCCATCATGTTCTGAATTTAAAGTTGGCATTTTTAGGACTGTTCTGAATTTAAAGTaGGCATTTTTAGGACTCGAG | + |
|
Preference number: 3 (lower is better) Translates to: PKLHSPSCSEFKVGIFRTVLNLK*AFLGLE Trigger: CTCGAGTCCTAAAAATGCCAACTTTAAATTCAGAAC...AGTCCTAAAAATGCCAACTTTAAATTCAGAACATGATGGACTATGTAGTTTGGG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000091459.12 ENSMUST00000099358.5 ENSMUST00000224217.2 |
||
| 3UTR TCA 72 bp | TACAGAATTACTGAATGTATGCATGTGCAAAGAGCATaGCATGTTACCAGTTTAAACCTTGCTAAAATCAGT | + |
|
Preference number: 3 (lower is better) Translates to: YRITECMHVQRA*HVTSLNLAKIS Trigger: ACTGATTTTAGCAAGGTTTAAACTGGTAACATGTCATGCTCTTTGCACATGCATACATTCAGTAATTCTGTA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091459.12 |
||
| 3UTR CAA 72 bp | GCGGGCGGGCGGCTGCGCGCTCACAGCTCCTCGTGCTaGATCCGGTGCGAGCGCCGCGTCAGGGCCGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: AGGRLRAHSSSC*IRCERRVRAGF Trigger: GAAGCCGGCCCTGACGCGGCGCTCGCACCGGATCAAGCACGAGGAGCTGTGAGCGCGCAGCCGCCCGCCCGC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224217.2 |
||
| CDS-3UTR GCA 90 bp | CTCCCGGCGCTTTCAGCCTCGGTCGCCGGGGCCCACAGTGCGAGGCCCGGCTCATCGTGCTTGATCCGGTaGGAGCGCCGCGTCAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LPALSASVAGAHSARPGSSCLIR*ERRVRA Trigger: GGCCCTGACGCGGCGCTCGCACCGGATCAAGCACGA...TGAGCCGGGCCTCGCACTGTGGGCCCCGGCGACCGAGGCTGAAAGCGCCGGGAG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091459.12 ENSMUST00000099358.5 |
||
| CDS-3UTR TCA 90 bp | AGACGCCGCTCGGCCAGCCGCGCCCGCGGATCAGCCGGGCAATTAGGAGCGCCCCAGGAAGTGAGCTCGTaGCGGTCGGTGCCTGCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: RRRSASRARGSAGQLGAPQEVSS*RSVPAD Trigger: GTCTGCAGGCACCGACCGTCACGAGCTCACTTCCTG...GGGCGCTCCTAATTGCCCGGCTGATCCGCGGGCGCGGCTGGCCGAGCGGCGTCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091459.12 ENSMUST00000099358.5 |
||
| CDS-3UTR CCA 90 bp | CGGTCGCCGGGGCCCACAGTGCGAGGCCCGGCTCAGCCGCAGGCAACTCGGCCGTGCCTGCAGACACTCTaGGACAGTCAGGCAGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: RSPGPTVRGPAQPQATRPCLQTL*DSQAAW Trigger: CCATGCTGCCTGACTGTCCCAGAGTGTCTGCAGGCA...CGGCCGAGTTGCCTGCGGCTGAGCCGGGCCTCGCACTGTGGGCCCCGGCGACCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091459.12 ENSMUST00000099358.5 |
||
| CDS-3UTR TCA 90 bp | GGACCGCGCAGACGCCGCTCGGCCAGCCGCGCCCGCGGATCAGCCGGGCAATTAAGCCTTCTAGCCCACTaGCCTGCCCTGACAACACCA | + |
|
Preference number: 4 (lower is better) Translates to: GPRRRRSASRARGSAGQLSLLAH*PALTTP Trigger: TGGTGTTGTCAGGGCAGGTCAGTGGGCTAGAAGGCT...TAATTGCCCGGCTGATCCGCGGGCGCGGCTGGCCGAGCGGCGTCTGCGCGGTCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091459.12 |
||
| CDS-3UTR GCA 90 bp | GGCGCTTTCAGCCTCGGTCGCCGGGGCCCACAGTGCGAGGCCCGGCTCAGCCGCCCTTTCCCGCTTCCCTaGTGGCTCATCTGTACCATC | + |
|
Preference number: 4 (lower is better) Translates to: GAFSLGRRGPQCEARLSRPFPLP*WLICTI Trigger: GATGGTACAGATGAGCCAGCAGGGAAGCGGGAAAGG...GCGGCTGAGCCGGGCCTCGCACTGTGGGCCCCGGCGACCGAGGCTGAAAGCGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091459.12 ENSMUST00000099358.5 |
||
| CDS-3UTR CCA 90 bp | CAGCCTCGGTCGCCGGGGCCCACAGTGCGAGGCCCGGCTCAGCCGCAGGCAACTTGCCTGCAGACACTCTaGGACAGTCAGGCAGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: QPRSPGPTVRGPAQPQATCLQTL*DSQAAW Trigger: CCATGCTGCCTGACTGTCCCAGAGTGTCTGCAGGCA...AGTTGCCTGCGGCTGAGCCGGGCCTCGCACTGTGGGCCCCGGCGACCGAGGCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091459.12 ENSMUST00000099358.5 |
||
| CDS-3UTR TCA 90 bp | AGACGCCGCTCGGCCAGCCGCGCCCGCGGATCAGCCGGGCAATTAGGAGCGCCCCCCACTGACCTGCCCTaGCAACACCACTACCATGAA | + |
|
Preference number: 4 (lower is better) Translates to: RRRSASRARGSAGQLGAPPTDLP*QHHYHE Trigger: TTCATGGTAGTGGTGTTGTCAGGGCAGGTCAGTGGG...GGGCGCTCCTAATTGCCCGGCTGATCCGCGGGCGCGGCTGGCCGAGCGGCGTCT 68% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000091459.12 |
||
| CDS-3UTR GCA 90 bp | CAGCCTCGGTCGCCGGGGCCCACAGTGCGAGGCCCGGCTCAGCCGCAGGCAACTCCTTTCCCGCTTCCCTaGTGGCTCATCTGTACCATC | + |
|
Preference number: 4 (lower is better) Translates to: QPRSPGPTVRGPAQPQATPFPLP*WLICTI Trigger: GATGGTACAGATGAGCCAGCAGGGAAGCGGGAAAGG...AGTTGCCTGCGGCTGAGCCGGGCCTCGCACTGTGGGCCCCGGCGACCGAGGCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091459.12 ENSMUST00000099358.5 |
||
| CDS-3UTR GCA 90 bp | GCGCTGGAGAAAGAAAGCAATCTAATGGGGGCCAGGAGGCTACGGGCGGCGGGCTCGTGCTTGATCCGGTaGGAGCGCCGCGTCAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: ALEKESNLMGARRLRAAGSCLIR*ERRVRA Trigger: GGCCCTGACGCGGCGCTCGCACCGGATCAAGCACGA...GCCCGCCGCCCGTAGCCTCCTGGCCCCCATTAGATTGCTTTCTTTCTCCAGCGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000091459.12 ENSMUST00000099358.5 |
||
| CDS-3UTR CCA 90 bp | CAGCCTCGGTCGCCGGGGCCCACAGTGCGAGGCCCGGCTCAGCCGCAGGCAACTTTCTCAGCAGCAGCCTaGGCTATGAAATGGTCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: QPRSPGPTVRGPAQPQATFSAAA*AMKWSH Trigger: GTGGGACCATTTCATAGCCCAGGCTGCTGCTGAGAA...AGTTGCCTGCGGCTGAGCCGGGCCTCGCACTGTGGGCCCCGGCGACCGAGGCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091459.12 ENSMUST00000099358.5 |
||
| CDS-3UTR CCA 90 bp | CGGTCGCCGGGGCCCACAGTGCGAGGCCCGGCTCAGCCGCAGGCAACTCGGCCGCTAATGGTTCTGAGCTaGAGACCCAGTTACAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: RSPGPTVRGPAQPQATRPLMVLS*RPSYNS Trigger: ACTGTTGTAACTGGGTCTCCAGCTCAGAACCATTAG...CGGCCGAGTTGCCTGCGGCTGAGCCGGGCCTCGCACTGTGGGCCCCGGCGACCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091459.12 ENSMUST00000099358.5 |
||
| CDS-3UTR TCA 90 bp | GCGCTGGAGAAAGAAAGCAATCTAATGGGGGCCAGGAGGCTACGGGCGGCGGGCCAGGAAGTGAGCTCGTaGCGGTCGGTGCCTGCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: ALEKESNLMGARRLRAAGQEVSS*RSVPAD Trigger: GTCTGCAGGCACCGACCGTCACGAGCTCACTTCCTG...GCCCGCCGCCCGTAGCCTCCTGGCCCCCATTAGATTGCTTTCTTTCTCCAGCGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000091459.12 ENSMUST00000099358.5 |
||
| CDS-3UTR GCA 90 bp | GGCGCTTTCAGCCTCGGTCGCCGGGGCCCACAGTGCGAGGCCCGGCTCAGCCGCATTCTCGGATGGTTTTaGCAGCTTCTTGATGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: GAFSLGRRGPQCEARLSRILGWF*QLLDAT Trigger: TGTGGCATCAAGAAGCTGGCAAAACCATCCGAGAAT...GCGGCTGAGCCGGGCCTCGCACTGTGGGCCCCGGCGACCGAGGCTGAAAGCGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091459.12 ENSMUST00000099358.5 |
||
| CDS-3UTR GCA 90 bp | AGTGCGAGGCCCGGCTCAGCCGCAGGCAACTCGGCCGCTGAAGCCATATTGCTTCCGGCTTCTGCGAGCTaGTCTTGGCCTCCGAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SARPGSAAGNSAAEAILLPASAS*SWPPRL Trigger: AAGCCTCGGAGGCCAAGAGCAGCTCGCAGAAGCCGG...AAGCAATATGGCTTCAGCGGCCGAGTTGCCTGCGGCTGAGCCGGGCCTCGCACT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091459.12 ENSMUST00000099358.5 |
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| CDS-3UTR CCA 90 bp | CCTCGGTCGCCGGGGCCCACAGTGCGAGGCCCGGCTCAGCCGCAGGCAACTCGGCTAATGGTTCTGAGCTaGAGACCCAGTTACAACAGT | + |
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Preference number: 4 (lower is better) Translates to: PRSPGPTVRGPAQPQATRLMVLS*RPSYNS Trigger: ACTGTTGTAACTGGGTCTCCAGCTCAGAACCATTAG...CCGAGTTGCCTGCGGCTGAGCCGGGCCTCGCACTGTGGGCCCCGGCGACCGAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091459.12 ENSMUST00000099358.5 |
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| CDS-3UTR TCA 90 bp | GGCGCTTTCAGCCTCGGTCGCCGGGGCCCACAGTGCGAGGCCCGGCTCAGCCGCATTTCTTTCTCCTTTTaGGGGTTGCGGTACTTCTCA | + |
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Preference number: 4 (lower is better) Translates to: GAFSLGRRGPQCEARLSRISFSF*GLRYFS Trigger: TGAGAAGTACCGCAACCCTCAAAAGGAGAAAGAAAT...GCGGCTGAGCCGGGCCTCGCACTGTGGGCCCCGGCGACCGAGGCTGAAAGCGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000091459.12 ENSMUST00000099358.5 |
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| CDS-3UTR GCA 90 bp | GGCGCTTTCAGCCTCGGTCGCCGGGGCCCACAGTGCGAGGCCCGGCTCAGCCGCTCTCCTTTTGAGGGTTaGGGTACTTCTCATAGAAAT | + |
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Preference number: 4 (lower is better) Translates to: GAFSLGRRGPQCEARLSRSPFEG*GTSHRN Trigger: ATTTCTATGAGAAGTACCGCAACCCTCAAAAGGAGA...GCGGCTGAGCCGGGCCTCGCACTGTGGGCCCCGGCGACCGAGGCTGAAAGCGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091459.12 ENSMUST00000099358.5 |
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| CDS-3UTR CCA 90 bp | TCAGCCTCGGTCGCCGGGGCCCACAGTGCGAGGCCCGGCTCAGCCGCAGGCAACGCCTTCCAGTGTATCTaGAAAATCAAAAGGTGGTTC | + |
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Preference number: 4 (lower is better) Translates to: SASVAGAHSARPGSAAGNAFQCI*KIKRWF Trigger: GAACCACCTTTTGATTTTCCAGATACACTGGAAGGC...GTTGCCTGCGGCTGAGCCGGGCCTCGCACTGTGGGCCCCGGCGACCGAGGCTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000091459.12 ENSMUST00000099358.5 ENSMUST00000224217.2 |
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| CDS-3UTR CCA 90 bp | GGACCGCGCAGACGCCGCTCGGCCAGCCGCGCCCGCGGATCAGCCGGGCAATTAGCCTTCCAGTGTATCTaGAAAATCAAAAGGTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: GPRRRRSASRARGSAGQLAFQCI*KIKRWF Trigger: GAACCACCTTTTGATTTTCCAGATACACTGGAAGGC...TAATTGCCCGGCTGATCCGCGGGCGCGGCTGGCCGAGCGGCGTCTGCGCGGTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000091459.12 ENSMUST00000099358.5 ENSMUST00000224217.2 |
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| CDS-3UTR CCA 90 bp | CTCCCGGCGCTTTCAGCCTCGGTCGCCGGGGCCCACAGTGCGAGGCCCGGCTCATCATCCATTCTCGGATaGTTTTGCCAGCTTCTTGAT | + |
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Preference number: 4 (lower is better) Translates to: LPALSASVAGAHSARPGSSSILG*FCQLLD Trigger: ATCAAGAAGCTGGCAAAACCATCCGAGAATGGATGA...TGAGCCGGGCCTCGCACTGTGGGCCCCGGCGACCGAGGCTGAAAGCGCCGGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091459.12 ENSMUST00000099358.5 |
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| CDS-3UTR TCA 90 bp | CCTCGGTCGCCGGGGCCCACAGTGCGAGGCCCGGCTCAGCCGCAGGCAACTCGGACAACACCACTACCATaGATTAAAACCATCAGTTTC | + |
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Preference number: 4 (lower is better) Translates to: PRSPGPTVRGPAQPQATRTTPLP*IKTISF Trigger: GAAACTGATGGTTTTAATTCATGGTAGTGGTGTTGT...CCGAGTTGCCTGCGGCTGAGCCGGGCCTCGCACTGTGGGCCCCGGCGACCGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091459.12 |
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| CDS-3UTR TCA 90 bp | GGCGCTTTCAGCCTCGGTCGCCGGGGCCCACAGTGCGAGGCCCGGCTCAGCCGCACATCTGCTTCTCGTTaGATCATCAGTTCAACAAAA | + |
|
Preference number: 4 (lower is better) Translates to: GAFSLGRRGPQCEARLSRTSASR*IISSTK Trigger: TTTTGTTGAACTGATGATTCAACGAGAAGCAGATGT...GCGGCTGAGCCGGGCCTCGCACTGTGGGCCCCGGCGACCGAGGCTGAAAGCGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091459.12 ENSMUST00000099358.5 |
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| CDS-3UTR TCA 90 bp | CGACCCTGCGCTGGAGAAAGAAAGCAATCTAATGGGGGCCAGGAGGCTACGGGCAGCTCTTCCAGGAAGTaGGCTCGTGACGGTCGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: RPCAGERKQSNGGQEATGSSSRK*ARDGRC Trigger: GCACCGACCGTCACGAGCTCACTTCCTGGAAGAGCT...GCCCGTAGCCTCCTGGCCCCCATTAGATTGCTTTCTTTCTCCAGCGCAGGGTCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000091459.12 ENSMUST00000099358.5 |
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| CDS-3UTR GCA 90 bp | CGGTCGCCGGGGCCCACAGTGCGAGGCCCGGCTCAGCCGCAGGCAACTCGGCCGCTTACTTTTTACATCTaGTTCTCGTTGAATCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: RSPGPTVRGPAQPQATRPLTFYI*FSLNHQ Trigger: CTGATGATTCAACGAGAAGCAGATGTAAAAAGTAAG...CGGCCGAGTTGCCTGCGGCTGAGCCGGGCCTCGCACTGTGGGCCCCGGCGACCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000091459.12 ENSMUST00000099358.5 |
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| CDS-3UTR TCA 90 bp | AGTGCGAGGCCCGGCTCAGCCGCAGGCAACTCGGCCGCTGAAGCCATATTGCTTATTTCTTTCTCCTTTTaGGGGTTGCGGTACTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SARPGSAAGNSAAEAILLISFSF*GLRYFS Trigger: TGAGAAGTACCGCAACCCTCAAAAGGAGAAAGAAAT...AAGCAATATGGCTTCAGCGGCCGAGTTGCCTGCGGCTGAGCCGGGCCTCGCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091459.12 ENSMUST00000099358.5 |
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| CDS-3UTR GCA 90 bp | GCAAAACGCTATTTAGACGGACACATCACGACCCTGCGCTGGAGAAAGAAAGCAGTGACGGTCGGTGCCTaGAGACACTCTGGGACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: AKRYLDGHITTLRWRKKAVTVGA*RHSGTV Trigger: GACTGTCCCAGAGTGTCTGCAGGCACCGACCGTCAC...TGCTTTCTTTCTCCAGCGCAGGGTCGTGATGTGTCCGTCTAAATAGCGTTTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091459.12 ENSMUST00000099358.5 |
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| CDS-3UTR TCA 90 bp | AGTGCGAGGCCCGGCTCAGCCGCAGGCAACTCGGCCGCTGAAGCCATATTGCTTACATCTGCTTCTCGTTaGATCATCAGTTCAACAAAA | + |
|
Preference number: 4 (lower is better) Translates to: SARPGSAAGNSAAEAILLTSASR*IISSTK Trigger: TTTTGTTGAACTGATGATTCAACGAGAAGCAGATGT...AAGCAATATGGCTTCAGCGGCCGAGTTGCCTGCGGCTGAGCCGGGCCTCGCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091459.12 ENSMUST00000099358.5 |
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| CDS-3UTR GCA 90 bp | GCAAAACGCTATTTAGACGGACACATCACGACCCTGCGCTGGAGAAAGAAAGCATCTAGCCCACTGACCTaGCCTGACAACACCACTACC | + |
|
Preference number: 4 (lower is better) Translates to: AKRYLDGHITTLRWRKKASSPLT*PDNTTT Trigger: GGTAGTGGTGTTGTCAGGGCAGGTCAGTGGGCTAGA...TGCTTTCTTTCTCCAGCGCAGGGTCGTGATGTGTCCGTCTAAATAGCGTTTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091459.12 |
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| CDS-3UTR GCA 90 bp | GACAGAAGACAAGGTTACAATCCAGTGACAGTAAAGTACTCATCCCAAGGAAACCCGGCTTCTGCGAGCTaGTCTTGGCCTCCGAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: DRRQGYNPVTVKYSSQGNPASAS*SWPPRL Trigger: AAGCCTCGGAGGCCAAGAGCAGCTCGCAGAAGCCGG...GTTTCCTTGGGATGAGTACTTTACTGTCACTGGATTGTAACCTTGTCTTCTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091459.12 |
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| CDS-3UTR CCA 90 bp | AGAAATATTAACCCTGGCCTCCCTGTAGGCAGGGTACTGCCAAGTGCTTGTTGTTTCCCGCTTCCCTGCTaGCTCATCTGTACCATCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RNINPGLPVGRVLPSACCFPLPC*LICTIR Trigger: TCTGATGGTACAGATGAGCCAGCAGGGAAGCGGGAA...ACAACAAGCACTTGGCAGTACCCTGCCTACAGGGAGGCCAGGGTTAATATTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091459.12 |
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| CDS-3UTR CCA 90 bp | GCAAAACGCTATTTAGACGGACACATCACGACCCTGCGCTGGAGAAAGAAAGCATTCTCAGCAGCAGCCTaGGCTATGAAATGGTCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: AKRYLDGHITTLRWRKKAFSAAA*AMKWSH Trigger: GTGGGACCATTTCATAGCCCAGGCTGCTGCTGAGAA...TGCTTTCTTTCTCCAGCGCAGGGTCGTGATGTGTCCGTCTAAATAGCGTTTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091459.12 ENSMUST00000099358.5 |
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| CDS-3UTR TCA 90 bp | GACAGAAGACAAGGTTACAATCCAGTGACAGTAAAGTACTCATCCCAAGGAAACAGCTCTTCCAGGAAGTaGGCTCGTGACGGTCGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: DRRQGYNPVTVKYSSQGNSSSRK*ARDGRC Trigger: GCACCGACCGTCACGAGCTCACTTCCTGGAAGAGCT...GTTTCCTTGGGATGAGTACTTTACTGTCACTGGATTGTAACCTTGTCTTCTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091459.12 |
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| CDS-3UTR CCA 90 bp | GGCCTCCGAGGCTTCCGCGAAGAACTTGAAGATAGACGGGAAGCTCTTCCAGGAGCTTCATATCTTTTCTaGTTCCACCTGTGTAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GLRGFREELEDRREALPGASYLF*FHLCKS Trigger: AGACTTACACAGGTGGAACCAGAAAAGATATGAAGC...TCCTGGAAGAGCTTCCCGTCTATCTTCAAGTTCTTCGCGGAAGCCTCGGAGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224217.2 |
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| CDS-3UTR GCA 90 bp | GTAAAATGTCAACTTATTTTATCTTCCGCGTTGGCCTTACTGTTGGAATTACAGGTGACGGTCGGTGCCTaGAGACACTCTGGGACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: VKCQLILSSALALLLELQVTVGA*RHSGTV Trigger: GACTGTCCCAGAGTGTCTGCAGGCACCGACCGTCAC...CTGTAATTCCAACAGTAAGGCCAACGCGGAAGATAAAATAAGTTGACATTTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091459.12 ENSMUST00000099358.5 |
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| CDS-3UTR CCA 90 bp | CCCAAACTACATAGTCCATCATGTTCTGAATTTAAAGTTGGCATTTTTAGGACTTCTGCGAGCTGCTCTTaGCCTCCGAGGCTTCCGCGA | + |
|
Preference number: 4 (lower is better) Translates to: PKLHSPSCSEFKVGIFRTSASCS*PPRLPR Trigger: TCGCGGAAGCCTCGGAGGCCAAGAGCAGCTCGCAGA...AGTCCTAAAAATGCCAACTTTAAATTCAGAACATGATGGACTATGTAGTTTGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000091459.12 ENSMUST00000099358.5 |
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| 3UTR CAA 72 bp | TGTCAACTTATTTTATCTTCCGCGTTGGCCTTACTGTaGGAATTACAGGGCAGCGCCCTATCACAGGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: CQLILSSALALL*ELQGSALSQEE Trigger: CTCTTCCTGTGATAGGGCGCTGCCCTGTAATTCCAACAGTAAGGCCAACGCGGAAGATAAAATAAGTTGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091459.12 ENSMUST00000099358.5 |
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| CDS-3UTR CCA 90 bp | CCCAAACTACATAGTCCATCATGTTCTGAATTTAAAGTTGGCATTTTTAGGACTTTCCCGCTTCCCTGCTaGCTCATCTGTACCATCAGA | + |
|
Preference number: 4 (lower is better) Translates to: PKLHSPSCSEFKVGIFRTFPLPC*LICTIR Trigger: TCTGATGGTACAGATGAGCCAGCAGGGAAGCGGGAA...AGTCCTAAAAATGCCAACTTTAAATTCAGAACATGATGGACTATGTAGTTTGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000091459.12 ENSMUST00000099358.5 |
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| CDS-3UTR CCA 90 bp | CAGGAAGAGAACAGTAAACATTTTGGCCTCAAAAGAGCAACCCATTCACACTACGCTTCATATCTTTTCTaGTTCCACCTGTGTAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: QEENSKHFGLKRATHSHYASYLF*FHLCKS Trigger: AGACTTACACAGGTGGAACCAGAAAAGATATGAAGC...GTAGTGTGAATGGGTTGCTCTTTTGAGGCCAAAATGTTTACTGTTCTCTTCCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000091459.12 ENSMUST00000099358.5 |
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| CDS-3UTR GCA 90 bp | CTACATAGTCCATCATGTTCTGAATTTAAAGTTGGCATTTTTAGGACTCGAGTGATTCTCGGATGGTTTTaGCAGCTTCTTGATGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: LHSPSCSEFKVGIFRTRVILGWF*QLLDAT Trigger: TGTGGCATCAAGAAGCTGGCAAAACCATCCGAGAAT...CACTCGAGTCCTAAAAATGCCAACTTTAAATTCAGAACATGATGGACTATGTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000091459.12 ENSMUST00000099358.5 |
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| 3UTR CAA 72 bp | CCAAACTACATAGTCCATCATGTTCTGAATTTAAAGTaGGCATTTTTAGGACTCGAGTGTGTGGCTTTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PNYIVHHVLNLK*AFLGLECVALC Trigger: ACACAAAGCCACACACTCGAGTCCTAAAAATGCCAACTTTAAATTCAGAACATGATGGACTATGTAGTTTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000091459.12 ENSMUST00000099358.5 ENSMUST00000224217.2 |
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| CDS-3UTR GCA 90 bp | GTAAAATGTCAACTTATTTTATCTTCCGCGTTGGCCTTACTGTTGGAATTACAGTCTCCTTTTGAGGGTTaGGGTACTTCTCATAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: VKCQLILSSALALLLELQSPFEG*GTSHRN Trigger: ATTTCTATGAGAAGTACCGCAACCCTCAAAAGGAGA...CTGTAATTCCAACAGTAAGGCCAACGCGGAAGATAAAATAAGTTGACATTTTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000091459.12 ENSMUST00000099358.5 |
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| CDS-3UTR CCA 90 bp | GTAAAATGTCAACTTATTTTATCTTCCGCGTTGGCCTTACTGTTGGAATTACAGAACCATCAGTTTCTGTaGATTTGTCAAAGCATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VKCQLILSSALALLLELQNHQFL*ICQSIL Trigger: GAGGATGCTTTGACAAATCCACAGAAACTGATGGTT...CTGTAATTCCAACAGTAAGGCCAACGCGGAAGATAAAATAAGTTGACATTTTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091459.12 |
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| CDS-3UTR CCA 90 bp | CCCAAACTACATAGTCCATCATGTTCTGAATTTAAAGTTGGCATTTTTAGGACTTCATCCATTCTCGGATaGTTTTGCCAGCTTCTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: PKLHSPSCSEFKVGIFRTSSILG*FCQLLD Trigger: ATCAAGAAGCTGGCAAAACCATCCGAGAATGGATGA...AGTCCTAAAAATGCCAACTTTAAATTCAGAACATGATGGACTATGTAGTTTGGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000091459.12 ENSMUST00000099358.5 |
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| CDS-3UTR CCA 90 bp | CCCAAACTACATAGTCCATCATGTTCTGAATTTAAAGTTGGCATTTTTAGGACTGCTTCATATCTTTTCTaGTTCCACCTGTGTAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: PKLHSPSCSEFKVGIFRTASYLF*FHLCKS Trigger: AGACTTACACAGGTGGAACCAGAAAAGATATGAAGC...AGTCCTAAAAATGCCAACTTTAAATTCAGAACATGATGGACTATGTAGTTTGGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000091459.12 ENSMUST00000099358.5 ENSMUST00000224217.2 |
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| CDS-3UTR GCA 90 bp | GTAAAATGTCAACTTATTTTATCTTCCGCGTTGGCCTTACTGTTGGAATTACAGTCCCTGATAAACAACTaGATCATTTCTTTCTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: VKCQLILSSALALLLELQSLINN*IISFSF Trigger: AAAGGAGAAAGAAATGATGCAGTTGTTTATCAGGGA...CTGTAATTCCAACAGTAAGGCCAACGCGGAAGATAAAATAAGTTGACATTTTAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091459.12 ENSMUST00000099358.5 |
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| CDS-3UTR GCA 90 bp | CCCGAAAAAGCTCCAAAGCTTGAATCAGACTATTTTGAATTTCCAATTTATGTCTCCCTGATAAACAACTaGATCATTTCTTTCTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: PEKAPKLESDYFEFPIYVSLINN*IISFSF Trigger: AAAGGAGAAAGAAATGATGCAGTTGTTTATCAGGGA...GACATAAATTGGAAATTCAAAATAGTCTGATTCAAGCTTTGGAGCTTTTTCGGG 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091459.12 |
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| CDS-3UTR GCA 90 bp | CCCGAAAAAGCTCCAAAGCTTGAATCAGACTATTTTGAATTTCCAATTTATGTCCTTACTTTTTACATCTaGTTCTCGTTGAATCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: PEKAPKLESDYFEFPIYVLTFYI*FSLNHQ Trigger: CTGATGATTCAACGAGAAGCAGATGTAAAAAGTAAG...GACATAAATTGGAAATTCAAAATAGTCTGATTCAAGCTTTGGAGCTTTTTCGGG 34% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000091459.12 |
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| CDS-3UTR CAA 90 bp | GCAAAACGCTATTTAGACGGACACATCACGACCCTGCGCTGGAGAAAGAAAGCAAATCACGACGCTTCTTaGTTTCCTTGGAGACCTTAT | + |
|
Preference number: 5 (lower is better) Translates to: AKRYLDGHITTLRWRKKANHDAS*FPWRPY Trigger: ATAAGGTCTCCAAGGAAACAAAGAAGCGTCGTGATT...TGCTTTCTTTCTCCAGCGCAGGGTCGTGATGTGTCCGTCTAAATAGCGTTTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091459.12 ENSMUST00000099358.5 |
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| CDS-3UTR CAA 90 bp | TCATCTAGAAATAATGCAAAACGCTATTTAGACGGACACATCACGACCCTGCGCAATCACGACGCTTCTTaGTTTCCTTGGAGACCTTAT | + |
|
Preference number: 5 (lower is better) Translates to: SSRNNAKRYLDGHITTLRNHDAS*FPWRPY Trigger: ATAAGGTCTCCAAGGAAACAAAGAAGCGTCGTGATT...GCGCAGGGTCGTGATGTGTCCGTCTAAATAGCGTTTTGCATTATTTCTAGATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091459.12 ENSMUST00000099358.5 |
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| CDS TCA 90 bp | CCTAGACAGCAAATCTTTCAATGCTGCAGTCTGTTCTGTTTCATTTaGACCTCCCTGCTGCATTTGTGCCATGTTTATCCAAATTGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: PRQQIFQCCSLFCFI*TSLLHLCHVYPNWQ Trigger: TTGCCAATTTGGATAAACATGGCACAAATGCAGCAGGGAGGTTCAAATGAAACAGAACAGACTGCAGCATTGAAAGATTTGCTGTCTAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163257.9 |
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| CDS-3UTR CAA 90 bp | GTAAAATGTCAACTTATTTTATCTTCCGCGTTGGCCTTACTGTTGGAATTACAGTCAGTTTCTGTGGATTaGTCAAAGCATCCTCACTCA | + |
|
Preference number: 5 (lower is better) Translates to: VKCQLILSSALALLLELQSVSVD*SKHPHS Trigger: TGAGTGAGGATGCTTTGACAAATCCACAGAAACTGA...CTGTAATTCCAACAGTAAGGCCAACGCGGAAGATAAAATAAGTTGACATTTTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091459.12 |
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| CDS-3UTR CAA 90 bp | CCCGAAAAAGCTCCAAAGCTTGAATCAGACTATTTTGAATTTCCAATTTATGTCTACATCTGCTTCTCGTaGAATCATCAGTTCAACAAA | + |
|
Preference number: 5 (lower is better) Translates to: PEKAPKLESDYFEFPIYVYICFS*NHQFNK Trigger: TTTGTTGAACTGATGATTCAACGAGAAGCAGATGTA...GACATAAATTGGAAATTCAAAATAGTCTGATTCAAGCTTTGGAGCTTTTTCGGG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091459.12 |
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| CDS-3UTR CAA 90 bp | CCCAAACTACATAGTCCATCATGTTCTGAATTTAAAGTTGGCATTTTTAGGACTTACATCTGCTTCTCGTaGAATCATCAGTTCAACAAA | + |
|
Preference number: 5 (lower is better) Translates to: PKLHSPSCSEFKVGIFRTYICFS*NHQFNK Trigger: TTTGTTGAACTGATGATTCAACGAGAAGCAGATGTA...AGTCCTAAAAATGCCAACTTTAAATTCAGAACATGATGGACTATGTAGTTTGGG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000091459.12 ENSMUST00000099358.5 |
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