Pregenerated sensors for FAM171B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048388Ensembl transcript IDs: ENSMUST00000051454.4
Found 168 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGGCAAATGAGCTGCACAGGCTCAGGAGACGGGGAACACAACCCCTaGAATCCCAGGCTGTTCTTCTCCAACCGTTCCAAAGCATCAGCA | + |
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Preference number: 1 (lower is better) Translates to: WQMSCTGSGDGEHNP*NPRLFFSNRSKASA Trigger: TGCTGATGCTTTGGAACGGTTGGAGAAGAACAGCCTGGGATTCCAGGGGTTGTGTTCCCCGTCTCCTGAGCCTGTGCAGCTCATTTGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| 3UTR GCA 90 bp | TGGCCCATGAGATTGCTCAGTCCCAGCTTCCTAAGAAGTTCACACTaGAATTTACAAGAAGCAGAAGACTACAGAGATACACAGCTCTAC | + |
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Preference number: 1 (lower is better) Translates to: WPMRLLSPSFLRSSH*NLQEAEDYRDTQLY Trigger: GTAGAGCTGTGTATCTCTGTAGTCTTCTGCTTCTTGTAAATTGCAGTGTGAACTTCTTAGGAAGCTGGGACTGAGCAATCTCATGGGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| 3UTR CCA 90 bp | ATCTCATTTCCCTTAGACAAGAATGAGCGAAGTCACTGGCGTACTTaGGCCATACACACATACATTTCTATGTGCACTGCATTGCCCAGT | + |
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Preference number: 1 (lower is better) Translates to: ISFPLDKNERSHWRT*AIHTYISMCTALPS Trigger: ACTGGGCAATGCAGTGCACATAGAAATGTATGTGTGTATGGCCCAAGTACGCCAGTGACTTCGCTCATTCTTGTCTAAGGGAAATGAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| 3UTR CCA 90 bp | GGATACCTCATCTCATTTCCCTTAGACAAGAATGAGCGAAGTCACTaGCGTACTTGGGCCATACACACATACATTTCTATGTGCACTGCA | + |
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Preference number: 1 (lower is better) Translates to: GYLISFPLDKNERSH*RTWAIHTYISMCTA Trigger: TGCAGTGCACATAGAAATGTATGTGTGTATGGCCCAAGTACGCCAGTGACTTCGCTCATTCTTGTCTAAGGGAAATGAGATGAGGTATCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| 3UTR TCA 90 bp | ATAAAAGCCCTTAGGATACCTCATCTCATTTCCCTTAGACAAGAATaGGCGAAGTCACTGGCGTACTTGGGCCATACACACATACATTTC | + |
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Preference number: 1 (lower is better) Translates to: IKALRIPHLISLRQE*AKSLAYLGHTHIHF Trigger: GAAATGTATGTGTGTATGGCCCAAGTACGCCAGTGACTTCGCTCATTCTTGTCTAAGGGAAATGAGATGAGGTATCCTAAGGGCTTTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| 3UTR TCA 90 bp | AGAGCTTTAGTATCCCTCAGTGTTTGTGATCTTTGTGGCACACTGTaGATTATAAAAGGGCATGATCCCTATTCACCTGCAGAAAGTCAT | + |
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Preference number: 1 (lower is better) Translates to: RALVSLSVCDLCGTL*IIKGHDPYSPAESH Trigger: ATGACTTTCTGCAGGTGAATAGGGATCATGCCCTTTTATAATTCACAGTGTGCCACAAAGATCACAAACACTGAGGGATACTAAAGCTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| 3UTR CCA 90 bp | TGTAGTACACATTTCACAGCTGTATTCTTAAGAGCCAGTACCAGTTaGCAAACTGAGCAACATTTTCAGATAACATCTTTACATTGTTTT | + |
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Preference number: 1 (lower is better) Translates to: CSTHFTAVFLRASTS*QTEQHFQITSLHCF Trigger: AAAACAATGTAAAGATGTTATCTGAAAATGTTGCTCAGTTTGCCAACTGGTACTGGCTCTTAAGAATACAGCTGTGAAATGTGTACTACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| 3UTR-3UTR CCA 90 bp | GAACAAGAGGGCACGACGTCAGCTCTGGATCTGAGGTCGAAACCAAGTAGACCTGGGGAACACAACCCCTaGAATCCCAGGCTGTTCTTC | + |
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Preference number: 2 (lower is better) Translates to: EQEGTTSALDLRSKPSRPGEHNP*NPRLFF Trigger: GAAGAACAGCCTGGGATTCCAGGGGTTGTGTTCCCC...AGGTCTACTTGGTTTCGACCTCAGATCCAGAGCTGACGTCGTGCCCTCTTGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| 3UTR-3UTR CCA 90 bp | ACAGGCTCAGGAGACGGGGAACACAACCCCTGGAATCCCAGGCTGTTCTTCTCCGCAGAGGCAAGATTTTaGAAAGCAACTGTAGTACAC | + |
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Preference number: 2 (lower is better) Translates to: TGSGDGEHNPWNPRLFFSAEARF*KATVVH Trigger: GTGTACTACAGTTGCTTTCCAAAATCTTGCCTCTGC...GGAGAAGAACAGCCTGGGATTCCAGGGGTTGTGTTCCCCGTCTCCTGAGCCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| 3UTR-3UTR GCA 90 bp | ACAGGCTCAGGAGACGGGGAACACAACCCCTGGAATCCCAGGCTGTTCTTCTCCTGGCCTTTCTTTTCCTaGACGATTATACAGAATATC | + |
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Preference number: 2 (lower is better) Translates to: TGSGDGEHNPWNPRLFFSWPFFS*TIIQNI Trigger: GATATTCTGTATAATCGTGCAGGAAAAGAAAGGCCA...GGAGAAGAACAGCCTGGGATTCCAGGGGTTGTGTTCCCCGTCTCCTGAGCCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| 3UTR-3UTR TCA 90 bp | CAAAGGAAAATGAACAAGGAAACGCCTGGGAACAAGAGGGCACGACGTCAGCTCCTCCTGAGTTCACACTaGGAGAACAGTAGTAAATGC | + |
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Preference number: 2 (lower is better) Translates to: QRKMNKETPGNKRARRQLLLSSH*ENSSKC Trigger: GCATTTACTACTGTTCTCTCAGTGTGAACTCAGGAG...GAGCTGACGTCGTGCCCTCTTGTTCCCAGGCGTTTCCTTGTTCATTTTCCTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| 3UTR-3UTR GCA 90 bp | ATGTTATTAATCCTCCTAACGCAAGTCTTAGTCAAAGGCACTTCCACAGAGCACCACTGGCAAATGAGCTaGACAGGCTCAGGAGACGGG | + |
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Preference number: 2 (lower is better) Translates to: MLLILLTQVLVKGTSTEHHWQMS*TGSGDG Trigger: CCCGTCTCCTGAGCCTGTGCAGCTCATTTGCCAGTG...GTGCTCTGTGGAAGTGCCTTTGACTAAGACTTGCGTTAGGAGGATTAATAACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| 3UTR-3UTR CCA 90 bp | CACAACCCCTGGAATCCCAGGCTGTTCTTCTCCAACCGTTCCAAAGCATCAGCAAGAGCCAGTACCAGTTaGCAAACTGAGCAACATTTT | + |
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Preference number: 2 (lower is better) Translates to: HNPWNPRLFFSNRSKASARASTS*QTEQHF Trigger: AAAATGTTGCTCAGTTTGCCAACTGGTACTGGCTCT...TGCTGATGCTTTGGAACGGTTGGAGAAGAACAGCCTGGGATTCCAGGGGTTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| 3UTR-3UTR GCA 90 bp | GAACAAGAGGGCACGACGTCAGCTCTGGATCTGAGGTCGAAACCAAGTAGACCTTTTTACCATCCACTTTaGTTGAGATGTGTCTATGGC | + |
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Preference number: 2 (lower is better) Translates to: EQEGTTSALDLRSKPSRPFYHPL*LRCVYG Trigger: GCCATAGACACATCTCAAGCAAAGTGGATGGTAAAA...AGGTCTACTTGGTTTCGACCTCAGATCCAGAGCTGACGTCGTGCCCTCTTGTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| 3UTR CAA 90 bp | AAACCGGGCGCTTCCCGCCCATGTTATGGGAGCACAGGATTTACGTaGGTGGCAACAACCCACAAGCCATTAATCTTAAATAAGAAAATG | + |
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Preference number: 2 (lower is better) Translates to: KPGASRPCYGSTGFT*VATTHKPLILNKKM Trigger: CATTTTCTTATTTAAGATTAATGGCTTGTGGGTTGTTGCCACCAACGTAAATCCTGTGCTCCCATAACATGGGCGGGAAGCGCCCGGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| 3UTR-3UTR GCA 90 bp | GAACAAGAGGGCACGACGTCAGCTCTGGATCTGAGGTCGAAACCAAGTAGACCTTCTCTAGTTTACATATaGAAAAGTCTGCATTGGCTT | + |
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Preference number: 2 (lower is better) Translates to: EQEGTTSALDLRSKPSRPSLVYI*KSLHWL Trigger: AAGCCAATGCAGACTTTTGCATATGTAAACTAGAGA...AGGTCTACTTGGTTTCGACCTCAGATCCAGAGCTGACGTCGTGCCCTCTTGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| 3UTR-3UTR CCA 90 bp | CAAAGGAAAATGAACAAGGAAACGCCTGGGAACAAGAGGGCACGACGTCAGCTCTCCAACATATTTAAGTaGCTTGAATTTGCTCAGGAG | + |
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Preference number: 2 (lower is better) Translates to: QRKMNKETPGNKRARRQLSNIFK*LEFAQE Trigger: CTCCTGAGCAAATTCAAGCCACTTAAATATGTTGGA...GAGCTGACGTCGTGCCCTCTTGTTCCCAGGCGTTTCCTTGTTCATTTTCCTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| 3UTR-3UTR GCA 90 bp | AACCATTTCTTCCCACCCAAAGAAAAGGGCGAGCTGCTGTACAAATGTGTCCTAGAGAACAGTAGTAAATaGCTGACACTGGCAAATGAG | + |
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Preference number: 2 (lower is better) Translates to: NHFFPPKEKGELLYKCVLENSSK*LTLANE Trigger: CTCATTTGCCAGTGTCAGGCATTTACTACTGTTCTC...TAGGACACATTTGTACAGCAGCTCGCCCTTTTCTTTGGGTGGGAAGAAATGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| 3UTR-3UTR GCA 90 bp | CAAAGGAAAATGAACAAGGAAACGCCTGGGAACAAGAGGGCACGACGTCAGCTCCATAGCAAAGGTCTTTaGATTCTTTGGGTTAAATAC | + |
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Preference number: 2 (lower is better) Translates to: QRKMNKETPGNKRARRQLHSKGL*ILWVKY Trigger: GTATTTAACCCAAAGAATGCAAAGACCTTTGCTATG...GAGCTGACGTCGTGCCCTCTTGTTCCCAGGCGTTTCCTTGTTCATTTTCCTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| 3UTR-3UTR TCA 90 bp | AACCATTTCTTCCCACCCAAAGAAAAGGGCGAGCTGCTGTACAAATGTGTCCTATTGATAGTCTCTAAATaGCTGATTTGGAATGGGGGA | + |
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Preference number: 2 (lower is better) Translates to: NHFFPPKEKGELLYKCVLLIVSK*LIWNGG Trigger: TCCCCCATTCCAAATCAGTCATTTAGAGACTATCAA...TAGGACACATTTGTACAGCAGCTCGCCCTTTTCTTTGGGTGGGAAGAAATGGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| 3UTR-3UTR CCA 90 bp | TATGATGTCTGCACACAGCAGAGGGTAACTCAAGCCATAGAAATAAACATGGAGCTTGAGATGTGTCTATaGCCCATGAGATTGCTCAGT | + |
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Preference number: 2 (lower is better) Translates to: YDVCTQQRVTQAIEINMELEMCL*PMRLLS Trigger: ACTGAGCAATCTCATGGGCCATAGACACATCTCAAG...CTCCATGTTTATTTCTATGGCTTGAGTTACCCTCTGCTGTGTGCAGACATCATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| 3UTR CAA 90 bp | ATTTTACCATCCACTTTGCTTGAGATGTGTCTATGGCCCATGAGATaGCTCAGTCCCAGCTTCCTAAGAAGTTCACACTGCAATTTACAA | + |
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Preference number: 2 (lower is better) Translates to: ILPSTLLEMCLWPMR*LSPSFLRSSHCNLQ Trigger: TTGTAAATTGCAGTGTGAACTTCTTAGGAAGCTGGGACTGAGCAATCTCATGGGCCATAGACACATCTCAAGCAAAGTGGATGGTAAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| 3UTR CAA 90 bp | GAAAATGCGGTTTGGTCTTTAACATCCATACACACATTTATCAGGTaGTTTCTAAGCATAGGCAGGAAACGCTTTCACAGTCCCACTGCA | + |
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Preference number: 2 (lower is better) Translates to: ENAVWSLTSIHTFIR*FLSIGRKRFHSPTA Trigger: TGCAGTGGGACTGTGAAAGCGTTTCCTGCCTATGCTTAGAAACAACCTGATAAATGTGTGTATGGATGTTAAAGACCAAACCGCATTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| 3UTR-3UTR CCA 90 bp | TATGATGTCTGCACACAGCAGAGGGTAACTCAAGCCATAGAAATAAACATGGAGTTAGGTAAAACAGGATaGTTGATGGTACTCGAGAGC | + |
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Preference number: 2 (lower is better) Translates to: YDVCTQQRVTQAIEINMELGKTG*LMVLES Trigger: GCTCTCGAGTACCATCAACCATCCTGTTTTACCTAA...CTCCATGTTTATTTCTATGGCTTGAGTTACCCTCTGCTGTGTGCAGACATCATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| 3UTR-3UTR TCA 90 bp | TCTGGAAACTGGCCTTTCTTTTCCTGCACGATTATACAGAATATCCATTTCCCTGCCTTTATGGATTCGTaGACCTTAAAAGTCAAAGCC | + |
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Preference number: 2 (lower is better) Translates to: SGNWPFFSCTIIQNIHFPAFMDS*TLKVKA Trigger: GGCTTTGACTTTTAAGGTTCACGAATCCATAAAGGC...AGGGAAATGGATATTCTGTATAATCGTGCAGGAAAAGAAAGGCCAGTTTCCAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| 3UTR-3UTR TCA 90 bp | TCTGGAAACTGGCCTTTCTTTTCCTGCACGATTATACAGAATATCCATTTCCCTTACCAGTTGGCAAACTaGGCAACATTTTCAGATAAC | + |
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Preference number: 2 (lower is better) Translates to: SGNWPFFSCTIIQNIHFPYQLAN*ATFSDN Trigger: GTTATCTGAAAATGTTGCTCAGTTTGCCAACTGGTA...AGGGAAATGGATATTCTGTATAATCGTGCAGGAAAAGAAAGGCCAGTTTCCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| 3UTR CAA 90 bp | ATGATGAAGATACCTGCCTTTCTAAGACAAGGCAGAGGCAAGATTTaGGAAAGCAACTGTAGTACACATTTCACAGCTGTATTCTTAAGA | + |
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Preference number: 2 (lower is better) Translates to: MMKIPAFLRQGRGKI*ESNCSTHFTAVFLR Trigger: TCTTAAGAATACAGCTGTGAAATGTGTACTACAGTTGCTTTCCAAAATCTTGCCTCTGCCTTGTCTTAGAAAGGCAGGTATCTTCATCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| 3UTR CCA 72 bp | AGCTGCACAGGCTCAGGAGACGGGGAACACAACCCCTaGAATCCCAGGCTGTTCTTCTCCAACCGTTCCAAA | + |
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Preference number: 3 (lower is better) Translates to: SCTGSGDGEHNP*NPRLFFSNRSK Trigger: TTTGGAACGGTTGGAGAAGAACAGCCTGGGATTCCAGGGGTTGTGTTCCCCGTCTCCTGAGCCTGTGCAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| 3UTR-3UTR CAA 90 bp | CACAACCCCTGGAATCCCAGGCTGTTCTTCTCCAACCGTTCCAAAGCATCAGCATACCATCCACTTTGCTaGAGATGTGTCTATGGCCCA | + |
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Preference number: 3 (lower is better) Translates to: HNPWNPRLFFSNRSKASAYHPLC*RCVYGP Trigger: TGGGCCATAGACACATCTCAAGCAAAGTGGATGGTA...TGCTGATGCTTTGGAACGGTTGGAGAAGAACAGCCTGGGATTCCAGGGGTTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| 3UTR-3UTR CAA 90 bp | CACAACCCCTGGAATCCCAGGCTGTTCTTCTCCAACCGTTCCAAAGCATCAGCACACACATTTATCAGGTaGTTTCTAAGCATAGGCAGG | + |
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Preference number: 3 (lower is better) Translates to: HNPWNPRLFFSNRSKASAHTFIR*FLSIGR Trigger: CCTGCCTATGCTTAGAAACAACCTGATAAATGTGTG...TGCTGATGCTTTGGAACGGTTGGAGAAGAACAGCCTGGGATTCCAGGGGTTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| 3UTR-3UTR CAA 90 bp | CAAAGGAAAATGAACAAGGAAACGCCTGGGAACAAGAGGGCACGACGTCAGCTCCACTGCATTGCCCAGTaGAGACATGAAGCCTTTTTA | + |
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Preference number: 3 (lower is better) Translates to: QRKMNKETPGNKRARRQLHCIAQ*RHEAFL Trigger: TAAAAAGGCTTCATGTCTCAACTGGGCAATGCAGTG...GAGCTGACGTCGTGCCCTCTTGTTCCCAGGCGTTTCCTTGTTCATTTTCCTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| 3UTR GCA 72 bp | TCCCACTGCACGAGGATGAGGCATGATGAAGATACCTaGCTTTCTAAGACAAGGCAGAGGCAAGATTTTGGA | + |
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Preference number: 3 (lower is better) Translates to: SHCTRMRHDEDT*LSKTRQRQDFG Trigger: TCCAAAATCTTGCCTCTGCCTTGTCTTAGAAAGGCAGGTATCTTCATCATGCCTCATCCTCGTGCAGTGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| 3UTR-3UTR CAA 90 bp | AGGCATGATGAAGATACCTGCCTTTCTAAGACAAGGCAGAGGCAAGATTTTGGACTATGGCCCATGAGATaGCTCAGTCCCAGCTTCCTA | + |
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Preference number: 3 (lower is better) Translates to: RHDEDTCLSKTRQRQDFGLWPMR*LSPSFL Trigger: TAGGAAGCTGGGACTGAGCAATCTCATGGGCCATAG...TCCAAAATCTTGCCTCTGCCTTGTCTTAGAAAGGCAGGTATCTTCATCATGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| 3UTR-3UTR CAA 90 bp | AACCATTTCTTCCCACCCAAAGAAAAGGGCGAGCTGCTGTACAAATGTGTCCTAGGTAAAACAGGATGGTaGATGGTACTCGAGAGCTCT | + |
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Preference number: 3 (lower is better) Translates to: NHFFPPKEKGELLYKCVLGKTGW*MVLESS Trigger: AGAGCTCTCGAGTACCATCAACCATCCTGTTTTACC...TAGGACACATTTGTACAGCAGCTCGCCCTTTTCTTTGGGTGGGAAGAAATGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| 3UTR TCA 72 bp | CTTAGGATACCTCATCTCATTTCCCTTAGACAAGAATaGGCGAAGTCACTGGCGTACTTGGGCCATACACAC | + |
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Preference number: 3 (lower is better) Translates to: LRIPHLISLRQE*AKSLAYLGHTH Trigger: GTGTGTATGGCCCAAGTACGCCAGTGACTTCGCTCATTCTTGTCTAAGGGAAATGAGATGAGGTATCCTAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| 3UTR CCA 72 bp | CCCTTAGACAAGAATGAGCGAAGTCACTGGCGTACTTaGGCCATACACACATACATTTCTATGTGCACTGCA | + |
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Preference number: 3 (lower is better) Translates to: PLDKNERSHWRT*AIHTYISMCTA Trigger: TGCAGTGCACATAGAAATGTATGTGTGTATGGCCCAAGTACGCCAGTGACTTCGCTCATTCTTGTCTAAGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| 3UTR-3UTR CAA 90 bp | TATGATGTCTGCACACAGCAGAGGGTAACTCAAGCCATAGAAATAAACATGGAGAGCACAGGATTTACGTaGGTGGCAACAACCCACAAG | + |
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Preference number: 3 (lower is better) Translates to: YDVCTQQRVTQAIEINMESTGFT*VATTHK Trigger: CTTGTGGGTTGTTGCCACCAACGTAAATCCTGTGCT...CTCCATGTTTATTTCTATGGCTTGAGTTACCCTCTGCTGTGTGCAGACATCATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| 3UTR CCA 72 bp | CCTATTTTACCATCCACTTTGCTTGAGATGTGTCTATaGCCCATGAGATTGCTCAGTCCCAGCTTCCTAAGA | + |
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Preference number: 3 (lower is better) Translates to: PILPSTLLEMCL*PMRLLSPSFLR Trigger: TCTTAGGAAGCTGGGACTGAGCAATCTCATGGGCCATAGACACATCTCAAGCAAAGTGGATGGTAAAATAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| 3UTR GCA 72 bp | CTGAGGTCGAAACCAAGTAGACCTCTTTATGATGTCTaGACACAGCAGAGGGTAACTCAAGCCATAGAAATA | + |
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Preference number: 3 (lower is better) Translates to: LRSKPSRPLYDV*TQQRVTQAIEI Trigger: TATTTCTATGGCTTGAGTTACCCTCTGCTGTGTGCAGACATCATAAAGAGGTCTACTTGGTTTCGACCTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| 3UTR TCA 72 bp | GTATCCCTCAGTGTTTGTGATCTTTGTGGCACACTGTaGATTATAAAAGGGCATGATCCCTATTCACCTGCA | + |
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Preference number: 3 (lower is better) Translates to: VSLSVCDLCGTL*IIKGHDPYSPA Trigger: TGCAGGTGAATAGGGATCATGCCCTTTTATAATTCACAGTGTGCCACAAAGATCACAAACACTGAGGGATAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| 3UTR GCA 72 bp | TACTTGGGCCATACACACATACATTTCTATGTGCACTaGATTGCCCAGTTGAGACATGAAGCCTTTTTAAGG | + |
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Preference number: 3 (lower is better) Translates to: YLGHTHIHFYVH*IAQLRHEAFLR Trigger: CCTTAAAAAGGCTTCATGTCTCAACTGGGCAATGCAGTGCACATAGAAATGTATGTGTGTATGGCCCAAGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| 3UTR CCA 72 bp | ATCTCATTTCCCTTAGACAAGAATGAGCGAAGTCACTaGCGTACTTGGGCCATACACACATACATTTCTATG | + |
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Preference number: 3 (lower is better) Translates to: ISFPLDKNERSH*RTWAIHTYISM Trigger: CATAGAAATGTATGTGTGTATGGCCCAAGTACGCCAGTGACTTCGCTCATTCTTGTCTAAGGGAAATGAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| 3UTR TCA 72 bp | ATGCTGCTTAGGATTGAATTCTGTGTAGAACCAACATaGAAGCCTCCTCTAAAAGTGAGCTGTATCACTCTC | + |
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Preference number: 3 (lower is better) Translates to: MLLRIEFCVEPT*KPPLKVSCITL Trigger: GAGAGTGATACAGCTCACTTTTAGAGGAGGCTTTCATGTTGGTTCTACACAGAATTCAATCCTAAGCAGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| 3UTR TCA 72 bp | CTTTTTAAGGTGAGGATACATACACACTTAAAGTGTTaGCCGGGTGCAGCATTTAACTATATCGTCCCTAAC | + |
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Preference number: 3 (lower is better) Translates to: LFKVRIHTHLKC*PGAAFNYIVPN Trigger: GTTAGGGACGATATAGTTAAATGCTGCACCCGGTCAACACTTTAAGTGTGTATGTATCCTCACCTTAAAAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| 3UTR TCA 72 bp | ACATTTCTATGTGCACTGCATTGCCCAGTTGAGACATaGAGCCTTTTTAAGGTGAGGATACATACACACTTA | + |
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Preference number: 3 (lower is better) Translates to: TFLCALHCPVET*SLFKVRIHTHL Trigger: TAAGTGTGTATGTATCCTCACCTTAAAAAGGCTTCATGTCTCAACTGGGCAATGCAGTGCACATAGAAATGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| CDS-3UTR CCA 90 bp | ACAGGCTCAGGAGACGGGGAACACAACCCCTGGAATCCCAGGCTGTTCTTCTCCGCGGAGGCTTGCCTTTaGACAGCTCCAGGAGGGTCT | + |
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Preference number: 4 (lower is better) Translates to: TGSGDGEHNPWNPRLFFSAEACL*TAPGGS Trigger: AGACCCTCCTGGAGCTGTCCAAAGGCAAGCCTCCGC...GGAGAAGAACAGCCTGGGATTCCAGGGGTTGTGTTCCCCGTCTCCTGAGCCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| CDS-3UTR GCA 90 bp | CAAAGGAAAATGAACAAGGAAACGCCTGGGAACAAGAGGGCACGACGTCAGCTCCGGCCTCCCCTCCTCTaGCTCCTCCCGCTGCTTTTG | + |
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Preference number: 4 (lower is better) Translates to: QRKMNKETPGNKRARRQLRPPLL*LLPLLL Trigger: CAAAAGCAGCGGGAGGAGGCAGAGGAGGGGAGGCCG...GAGCTGACGTCGTGCCCTCTTGTTCCCAGGCGTTTCCTTGTTCATTTTCCTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| CDS-3UTR GCA 90 bp | GAACAAGAGGGCACGACGTCAGCTCTGGATCTGAGGTCGAAACCAAGTAGACCTAACCAAGCCCTGGGATaGGGAGGCTTGCCTTTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: EQEGTTSALDLRSKPSRPNQALG*GGLPLD Trigger: GTCCAAAGGCAAGCCTCCGCATCCCAGGGCTTGGTT...AGGTCTACTTGGTTTCGACCTCAGATCCAGAGCTGACGTCGTGCCCTCTTGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
||
| CDS-3UTR GCA 90 bp | ACAGGCTCAGGAGACGGGGAACACAACCCCTGGAATCCCAGGCTGTTCTTCTCCCCCTCTCCAGCTTTCTaGTTGACTGATGCTCGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TGSGDGEHNPWNPRLFFSPSPAF*LTDARS Trigger: TGAACGAGCATCAGTCAAGCAGAAAGCTGGAGAGGG...GGAGAAGAACAGCCTGGGATTCCAGGGGTTGTGTTCCCCGTCTCCTGAGCCTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
||
| CDS-3UTR TCA 90 bp | CAAAGGAAAATGAACAAGGAAACGCCTGGGAACAAGAGGGCACGACGTCAGCTCACTGTTCCCCAACCGTaGTGCACCCAAACACCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: QRKMNKETPGNKRARRQLTVPQP*CTQTPA Trigger: TGCAGGTGTTTGGGTGCATCACGGTTGGGGAACAGT...GAGCTGACGTCGTGCCCTCTTGTTCCCAGGCGTTTCCTTGTTCATTTTCCTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
||
| CDS-3UTR TCA 90 bp | ACAGGCTCAGGAGACGGGGAACACAACCCCTGGAATCCCAGGCTGTTCTTCTCCCATGGAGAAAAGGTCTaGTGTCTGAAGGATGGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: TGSGDGEHNPWNPRLFFSHGEKV*CLKDGN Trigger: ATTGCCATCCTTCAGACATCAGACCTTTTCTCCATG...GGAGAAGAACAGCCTGGGATTCCAGGGGTTGTGTTCCCCGTCTCCTGAGCCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
||
| CDS-3UTR CCA 90 bp | CACAACCCCTGGAATCCCAGGCTGTTCTTCTCCAACCGTTCCAAAGCATCAGCACTGCCTCCGTTTTTGTaGTTTCCTTTCTCTGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: HNPWNPRLFFSNRSKASALPPFL*FPFSGD Trigger: GTCCCCAGAGAAAGGAAACCACAAAAACGGAGGCAG...TGCTGATGCTTTGGAACGGTTGGAGAAGAACAGCCTGGGATTCCAGGGGTTGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
||
| CDS-3UTR CCA 90 bp | ATGTTATTAATCCTCCTAACGCAAGTCTTAGTCAAAGGCACTTCCACAGAGCACCGGGGGAGCAGACGGTaGTTCCACTCTCGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: MLLILLTQVLVKGTSTEHRGSRR*FHSRCC Trigger: GCAGCAGCGAGAGTGGAACCACCGTCTGCTCCCCCG...GTGCTCTGTGGAAGTGCCTTTGACTAAGACTTGCGTTAGGAGGATTAATAACAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
||
| CDS-3UTR TCA 90 bp | CACAACCCCTGGAATCCCAGGCTGTTCTTCTCCAACCGTTCCAAAGCATCAGCAGATGGCAAGCTCTGCTaGCCTTCAAGTACAATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: HNPWNPRLFFSNRSKASADGKLC*PSSTMS Trigger: AGACATTGTACTTGAAGGTCAGCAGAGCTTGCCATC...TGCTGATGCTTTGGAACGGTTGGAGAAGAACAGCCTGGGATTCCAGGGGTTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
||
| CDS-3UTR GCA 90 bp | AGGCATGATGAAGATACCTGCCTTTCTAAGACAAGGCAGAGGCAAGATTTTGGATGCTGCTGCTGCTGCTaGTGGATGAGGCTGAGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: RHDEDTCLSKTRQRQDFGCCCCC*WMRLRS Trigger: CGACCTCAGCCTCATCCAGCAGCAGCAGCAGCAGCA...TCCAAAATCTTGCCTCTGCCTTGTCTTAGAAAGGCAGGTATCTTCATCATGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
||
| CDS-3UTR TCA 90 bp | CACAACCCCTGGAATCCCAGGCTGTTCTTCTCCAACCGTTCCAAAGCATCAGCAGTCACGTTGCTGATGTaGTGGTTGTCAGGAAGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: HNPWNPRLFFSNRSKASAVTLLM*WLSGSL Trigger: TAAACTTCCTGACAACCATCACATCAGCAACGTGAC...TGCTGATGCTTTGGAACGGTTGGAGAAGAACAGCCTGGGATTCCAGGGGTTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
||
| CDS-3UTR TCA 90 bp | ATGTTATTAATCCTCCTAACGCAAGTCTTAGTCAAAGGCACTTCCACAGAGCACGGCTGTAGATGTGCATaGGCTGCTCGGGAATGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: MLLILLTQVLVKGTSTEHGCRCA*AARECG Trigger: CCCACATTCCCGAGCAGCTCATGCACATCTACAGCC...GTGCTCTGTGGAAGTGCCTTTGACTAAGACTTGCGTTAGGAGGATTAATAACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
||
| CDS-3UTR GCA 90 bp | ATGTTATTAATCCTCCTAACGCAAGTCTTAGTCAAAGGCACTTCCACAGAGCACTCTGCCTCCTCCCGCTaGTTTTGCTCTTGCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: MLLILLTQVLVKGTSTEHSASSR*FCSCSC Trigger: GCAGCTGCAAGAGCAAAAGCAGCGGGAGGAGGCAGA...GTGCTCTGTGGAAGTGCCTTTGACTAAGACTTGCGTTAGGAGGATTAATAACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
||
| CDS-3UTR GCA 90 bp | CACAACCCCTGGAATCCCAGGCTGTTCTTCTCCAACCGTTCCAAAGCATCAGCAGGAAATCGTCATTTATaGCGAAATCTAGAGTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: HNPWNPRLFFSNRSKASAGNRHL*RNLEWL Trigger: CAGCCACTCTAGATTTCGGCATAAATGACGATTTCC...TGCTGATGCTTTGGAACGGTTGGAGAAGAACAGCCTGGGATTCCAGGGGTTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
||
| CDS-3UTR GCA 90 bp | TATGATGTCTGCACACAGCAGAGGGTAACTCAAGCCATAGAAATAAACATGGAGTGGGATGCGGAGGCTTaGCTTTGGACAGCTCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: YDVCTQQRVTQAIEINMEWDAEA*LWTAPG Trigger: TCCTGGAGCTGTCCAAAGGCAAGCCTCCGCATCCCA...CTCCATGTTTATTTCTATGGCTTGAGTTACCCTCTGCTGTGTGCAGACATCATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
||
| CDS-3UTR GCA 90 bp | CAAAGGAAAATGAACAAGGAAACGCCTGGGAACAAGAGGGCACGACGTCAGCTCCTAGACTCGTATCATTaGTCTGGGTTCTCTTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: QRKMNKETPGNKRARRQLLDSYH*SGFSCL Trigger: AAGGCAAGAGAACCCAGAGCAATGATACGAGTCTAG...GAGCTGACGTCGTGCCCTCTTGTTCCCAGGCGTTTCCTTGTTCATTTTCCTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
||
| CDS-3UTR CCA 90 bp | TATGATGTCTGCACACAGCAGAGGGTAACTCAAGCCATAGAAATAAACATGGAGACCTCCACAACGGCTTaGCTCAGGTACTGGCGACTG | + |
|
Preference number: 4 (lower is better) Translates to: YDVCTQQRVTQAIEINMETSTTA*LRYWRL Trigger: CAGTCGCCAGTACCTGAGCCAAGCCGTTGTGGAGGT...CTCCATGTTTATTTCTATGGCTTGAGTTACCCTCTGCTGTGTGCAGACATCATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
||
| CDS-3UTR CCA 90 bp | CACAACCCCTGGAATCCCAGGCTGTTCTTCTCCAACCGTTCCAAAGCATCAGCAAGCCATATATTTGCTTaGCTTTGCGGGAACAGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: HNPWNPRLFFSNRSKASASHIFA*LCGNSE Trigger: TTCACTGTTCCCGCAAAGCCAAGCAAATATATGGCT...TGCTGATGCTTTGGAACGGTTGGAGAAGAACAGCCTGGGATTCCAGGGGTTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
||
| CDS-3UTR CCA 90 bp | GAACAAGAGGGCACGACGTCAGCTCTGGATCTGAGGTCGAAACCAAGTAGACCTGTTCTCTCTGTTCACTaGTTCCATCAATTGGCCATA | + |
|
Preference number: 4 (lower is better) Translates to: EQEGTTSALDLRSKPSRPVLSVH*FHQLAI Trigger: TATGGCCAATTGATGGAACCAGTGAACAGAGAGAAC...AGGTCTACTTGGTTTCGACCTCAGATCCAGAGCTGACGTCGTGCCCTCTTGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
||
| CDS-3UTR TCA 90 bp | AACCATTTCTTCCCACCCAAAGAAAAGGGCGAGCTGCTGTACAAATGTGTCCTAAGCCAGTCACGTTGCTaGTGTGATGGTTGTCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: NHFFPPKEKGELLYKCVLSQSRC*CDGCQE Trigger: TTCCTGACAACCATCACATCAGCAACGTGACTGGCT...TAGGACACATTTGTACAGCAGCTCGCCCTTTTCTTTGGGTGGGAAGAAATGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
||
| CDS-3UTR GCA 90 bp | CACAACCCCTGGAATCCCAGGCTGTTCTTCTCCAACCGTTCCAAAGCATCAGCAATATTTGCTTGGCTTTaGGGGAACAGTGAAAGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: HNPWNPRLFFSNRSKASAIFAWL*GNSESV Trigger: TACACTTTCACTGTTCCCGCAAAGCCAAGCAAATAT...TGCTGATGCTTTGGAACGGTTGGAGAAGAACAGCCTGGGATTCCAGGGGTTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
||
| CDS-3UTR GCA 90 bp | AACCATTTCTTCCCACCCAAAGAAAAGGGCGAGCTGCTGTACAAATGTGTCCTATGGTTCCACTCTCGCTaGTGCTCAGGTCTAAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: NHFFPPKEKGELLYKCVLWFHSR*CSGLSL Trigger: AAGACTTAGACCTGAGCAGCAGCGAGAGTGGAACCA...TAGGACACATTTGTACAGCAGCTCGCCCTTTTCTTTGGGTGGGAAGAAATGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
||
| CDS-3UTR CCA 90 bp | AGGCATGATGAAGATACCTGCCTTTCTAAGACAAGGCAGAGGCAAGATTTTGGAGCTTGGCTCAGGTACTaGCGACTGACGATGTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: RHDEDTCLSKTRQRQDFGAWLRY*RLTMSL Trigger: CAATGACATCGTCAGTCGCCAGTACCTGAGCCAAGC...TCCAAAATCTTGCCTCTGCCTTGTCTTAGAAAGGCAGGTATCTTCATCATGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
||
| CDS-3UTR CCA 90 bp | CAAAGGAAAATGAACAAGGAAACGCCTGGGAACAAGAGGGCACGACGTCAGCTCCCCGAGTTTTCACCATaGAAATTCTTTCTTCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QRKMNKETPGNKRARRQLPEFSP*KFFLLP Trigger: AGGCAGAAGAAAGAATTTCCATGGTGAAAACTCGGG...GAGCTGACGTCGTGCCCTCTTGTTCCCAGGCGTTTCCTTGTTCATTTTCCTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
||
| CDS-3UTR CCA 90 bp | AACCATTTCTTCCCACCCAAAGAAAAGGGCGAGCTGCTGTACAAATGTGTCCTAGTTTGCTCCCCATACTaGGCTCCAAAGACTGTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: NHFFPPKEKGELLYKCVLVCSPY*APKTVL Trigger: CAACACAGTCTTTGGAGCCCAGTATGGGGAGCAAAC...TAGGACACATTTGTACAGCAGCTCGCCCTTTTCTTTGGGTGGGAAGAAATGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
||
| CDS-3UTR GCA 90 bp | CACAACCCCTGGAATCCCAGGCTGTTCTTCTCCAACCGTTCCAAAGCATCAGCATATTTTCACACATATTaGAGCATGAGGAGTCAACTC | + |
|
Preference number: 4 (lower is better) Translates to: HNPWNPRLFFSNRSKASAYFHTY*SMRSQL Trigger: GAGTTGACTCCTCATGCTGCAATATGTGTGAAAATA...TGCTGATGCTTTGGAACGGTTGGAGAAGAACAGCCTGGGATTCCAGGGGTTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
||
| CDS-3UTR CCA 90 bp | TATGATGTCTGCACACAGCAGAGGGTAACTCAAGCCATAGAAATAAACATGGAGTGCCGAAATCTAGAGTaGCTGGGGATGGAGCTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: YDVCTQQRVTQAIEINMECRNLE*LGMELL Trigger: TAGCAGCTCCATCCCCAGCCACTCTAGATTTCGGCA...CTCCATGTTTATTTCTATGGCTTGAGTTACCCTCTGCTGTGTGCAGACATCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
||
| CDS-3UTR CCA 90 bp | TCTGGAAACTGGCCTTTCTTTTCCTGCACGATTATACAGAATATCCATTTCCCTTCTTGCTATCTCTTTTaGCTAGTGGCGGTGGCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: SGNWPFFSCTIIQNIHFPSCYLF*LVAVAG Trigger: GCCGGCCACCGCCACTAGCCAAAAGAGATAGCAAGA...AGGGAAATGGATATTCTGTATAATCGTGCAGGAAAAGAAAGGCCAGTTTCCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
||
| 3UTR CAA 72 bp | GCTTCCCGCCCATGTTATGGGAGCACAGGATTTACGTaGGTGGCAACAACCCACAAGCCATTAATCTTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: ASRPCYGSTGFT*VATTHKPLILN Trigger: ATTTAAGATTAATGGCTTGTGGGTTGTTGCCACCAACGTAAATCCTGTGCTCCCATAACATGGGCGGGAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
||
| CDS-3UTR TCA 90 bp | TCTGGAAACTGGCCTTTCTTTTCCTGCACGATTATACAGAATATCCATTTCCCTATATCGGCTCCAATCTaGGGTCTGGGATGGCAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SGNWPFFSCTIIQNIHFPISAPI*GLGWQA Trigger: AGCTTGCCATCCCAGACCTCAGATTGGAGCCGATAT...AGGGAAATGGATATTCTGTATAATCGTGCAGGAAAAGAAAGGCCAGTTTCCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
||
| CDS-3UTR CCA 90 bp | AACCATTTCTTCCCACCCAAAGAAAAGGGCGAGCTGCTGTACAAATGTGTCCTAGTAACTGCTCTGGCATaGAGAAAAGGTCTGATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: NHFFPPKEKGELLYKCVLVTALA*RKGLMS Trigger: AGACATCAGACCTTTTCTCCATGCCAGAGCAGTTAC...TAGGACACATTTGTACAGCAGCTCGCCCTTTTCTTTGGGTGGGAAGAAATGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
||
| CDS-3UTR CCA 90 bp | TATGATGTCTGCACACAGCAGAGGGTAACTCAAGCCATAGAAATAAACATGGAGAAGGAGTGTCTCACTTaGGCCACAGGCTTTCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: YDVCTQQRVTQAIEINMEKECLT*ATGFPS Trigger: TGATGGAAAGCCTGTGGCCCAAGTGAGACACTCCTT...CTCCATGTTTATTTCTATGGCTTGAGTTACCCTCTGCTGTGTGCAGACATCATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
||
| CDS-3UTR TCA 90 bp | TCTGGAAACTGGCCTTTCTTTTCCTGCACGATTATACAGAATATCCATTTCCCTTCCTTGAAGTTCCGATaGAAAGGGGGTCATCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: SGNWPFFSCTIIQNIHFPSLKFR*KGGHHH Trigger: GTGGTGATGACCCCCTTTTCATCGGAACTTCAAGGA...AGGGAAATGGATATTCTGTATAATCGTGCAGGAAAAGAAAGGCCAGTTTCCAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
||
| CDS-3UTR TCA 90 bp | TATGATGTCTGCACACAGCAGAGGGTAACTCAAGCCATAGAAATAAACATGGAGCTCCAGCTTTCTGCTTaGCTGATGCTCGTTCATATC | + |
|
Preference number: 4 (lower is better) Translates to: YDVCTQQRVTQAIEINMELQLSA*LMLVHI Trigger: GATATGAACGAGCATCAGTCAAGCAGAAAGCTGGAG...CTCCATGTTTATTTCTATGGCTTGAGTTACCCTCTGCTGTGTGCAGACATCATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
||
| CDS-3UTR CCA 90 bp | AGGCATGATGAAGATACCTGCCTTTCTAAGACAAGGCAGAGGCAAGATTTTGGACATAAATACGGACACTaGAGCCACCAAAGTAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RHDEDTCLSKTRQRQDFGHKYGH*SHQSRG Trigger: TCCTCTACTTTGGTGGCTCCAGTGTCCGTATTTATG...TCCAAAATCTTGCCTCTGCCTTGTCTTAGAAAGGCAGGTATCTTCATCATGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
||
| CDS-3UTR TCA 90 bp | TCTGGAAACTGGCCTTTCTTTTCCTGCACGATTATACAGAATATCCATTTCCCTGTTGTCGAGGTTGTCTaGTCTCTCTTGAGGATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SGNWPFFSCTIIQNIHFPVVEVV*SLLRIS Trigger: TGAGATCCTCAAGAGAGATCAGACAACCTCGACAAC...AGGGAAATGGATATTCTGTATAATCGTGCAGGAAAAGAAAGGCCAGTTTCCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
||
| CDS-3UTR CCA 90 bp | TATGATGTCTGCACACAGCAGAGGGTAACTCAAGCCATAGAAATAAACATGGAGACTCCAACAAGCTGTTaGAATATCGGCTCCAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: YDVCTQQRVTQAIEINMETPTSC*NIGSNL Trigger: CAGATTGGAGCCGATATTCCAACAGCTTGTTGGAGT...CTCCATGTTTATTTCTATGGCTTGAGTTACCCTCTGCTGTGTGCAGACATCATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
||
| CDS-3UTR TCA 90 bp | TCTGGAAACTGGCCTTTCTTTTCCTGCACGATTATACAGAATATCCATTTCCCTTGCTCTGAAATTCCTTaGAGTTCCGATGAAAAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SGNWPFFSCTIIQNIHFPCSEIP*SSDEKG Trigger: CCCCTTTTCATCGGAACTTCAAGGAATTTCAGAGCA...AGGGAAATGGATATTCTGTATAATCGTGCAGGAAAAGAAAGGCCAGTTTCCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
||
| CDS-3UTR GCA 90 bp | TATGATGTCTGCACACAGCAGAGGGTAACTCAAGCCATAGAAATAAACATGGAGAAAGAGCCATATATTTaGTTGGCTTTGCGGGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: YDVCTQQRVTQAIEINMEKEPYI*LALREQ Trigger: CTGTTCCCGCAAAGCCAAGCAAATATATGGCTCTTT...CTCCATGTTTATTTCTATGGCTTGAGTTACCCTCTGCTGTGTGCAGACATCATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
||
| CDS-3UTR GCA 90 bp | AGGCATGATGAAGATACCTGCCTTTCTAAGACAAGGCAGAGGCAAGATTTTGGAAGATTGTTGTTAATATaGTTAGGCTGTTTGCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: RHDEDTCLSKTRQRQDFGRLLLI*LGCLLP Trigger: GGGGAGCAAACAGCCTAAGCATATTAACAACAATCT...TCCAAAATCTTGCCTCTGCCTTGTCTTAGAAAGGCAGGTATCTTCATCATGCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
||
| CDS-3UTR CCA 90 bp | CTCAGTCCCAGCTTCCTAAGAAGTTCACACTGCAATTTACAAGAAGCAGAAGACCACTTGGTTGAGATTTaGCATCAGCTAATTTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSPSFLRSSHCNLQEAEDHLVEI*HQLIFL Trigger: CAGGAAAATTAGCTGATGCCAAATCTCAACCAAGTG...GTCTTCTGCTTCTTGTAAATTGCAGTGTGAACTTCTTAGGAAGCTGGGACTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
||
| 3UTR CAA 72 bp | ATACCTGCCTTTCTAAGACAAGGCAGAGGCAAGATTTaGGAAAGCAACTGTAGTACACATTTCACAGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: IPAFLRQGRGKI*ESNCSTHFTAV Trigger: TACAGCTGTGAAATGTGTACTACAGTTGCTTTCCAAAATCTTGCCTCTGCCTTGTCTTAGAAAGGCAGGTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
||
| CDS-3UTR TCA 90 bp | ATGTTATTAATCCTCCTAACGCAAGTCTTAGTCAAAGGCACTTCCACAGAGCACACACATATTGCAGCATaGGGAGTCAACTCAACATTT | + |
|
Preference number: 4 (lower is better) Translates to: MLLILLTQVLVKGTSTEHTHIAA*GVNSTF Trigger: AAATGTTGAGTTGACTCCTCATGCTGCAATATGTGT...GTGCTCTGTGGAAGTGCCTTTGACTAAGACTTGCGTTAGGAGGATTAATAACAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
||
| CDS-3UTR TCA 90 bp | TCTGGAAACTGGCCTTTCTTTTCCTGCACGATTATACAGAATATCCATTTCCCTGGATCTCAAGCTTCGTaGTATTTCTTTCTCTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SGNWPFFSCTIIQNIHFPGSQAS*YFFLFS Trigger: AGAAAAGAGAAAGAAATATCACGAAGCTTGAGATCC...AGGGAAATGGATATTCTGTATAATCGTGCAGGAAAAGAAAGGCCAGTTTCCAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
||
| 3UTR CAA 72 bp | GTTTGGTCTTTAACATCCATACACACATTTATCAGGTaGTTTCTAAGCATAGGCAGGAAACGCTTTCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: VWSLTSIHTFIR*FLSIGRKRFHS Trigger: ACTGTGAAAGCGTTTCCTGCCTATGCTTAGAAACAACCTGATAAATGTGTGTATGGATGTTAAAGACCAAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
||
| 3UTR CAA 72 bp | TTTTCCTGCACGATTATACAGAATATCCATTTCCCTTaGTCTCCACAGTCTATTCATTTTCGGCATTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: FSCTIIQNIHFP*SPQSIHFRHSK Trigger: TTTGGAATGCCGAAAATGAATAGACTGTGGAGACAAAGGGAAATGGATATTCTGTATAATCGTGCAGGAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
||
| CDS GCA 90 bp | GGCCTCCCCTCCTCTGCCTCCTCCCGCTGCTTTTGCTCTTGCAGCTaGTGCTGCTGCTGCTGCTGGATGAGGCTGAGGTCGGAGCGACTG | + |
|
Preference number: 5 (lower is better) Translates to: GLPSSASSRCFCSCS*CCCCCWMRLRSERL Trigger: CAGTCGCTCCGACCTCAGCCTCATCCAGCAGCAGCAGCAGCAGCAGCTGCAAGAGCAAAAGCAGCGGGAGGAGGCAGAGGAGGGGAGGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
||
| CDS GCA 90 bp | GCCTCCTCCCGCTGCTTTTGCTCTTGCAGCTGCTGCTGCTGCTGCTaGTGGATGAGGCTGAGGTCGGAGCGACTGAGTTCGGCTCTAGCG | + |
|
Preference number: 5 (lower is better) Translates to: ASSRCFCSCSCCCCC*WMRLRSERLSSALA Trigger: CGCTAGAGCCGAACTCAGTCGCTCCGACCTCAGCCTCATCCAGCAGCAGCAGCAGCAGCAGCTGCAAGAGCAAAAGCAGCGGGAGGAGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| CDS CCA 90 bp | TCCTCCCGCTGCTTTTGCTCTTGCAGCTGCTGCTGCTGCTGCTGCTaGATGAGGCTGAGGTCGGAGCGACTGAGTTCGGCTCTAGCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SSRCFCSCSCCCCCC*MRLRSERLSSALAA Trigger: GGCCGCTAGAGCCGAACTCAGTCGCTCCGACCTCAGCCTCATCCAGCAGCAGCAGCAGCAGCAGCTGCAAGAGCAAAAGCAGCGGGAGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| CDS GCA 90 bp | TCCTCTGCCTCCTCCCGCTGCTTTTGCTCTTGCAGCTGCTGCTGCTaGTGCTGCTGGATGAGGCTGAGGTCGGAGCGACTGAGTTCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SSASSRCFCSCSCCC*CCWMRLRSERLSSA Trigger: AGCCGAACTCAGTCGCTCCGACCTCAGCCTCATCCAGCAGCAGCAGCAGCAGCAGCTGCAAGAGCAAAAGCAGCGGGAGGAGGCAGAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| CDS GCA 90 bp | TCTGCCTCCTCCCGCTGCTTTTGCTCTTGCAGCTGCTGCTGCTGCTaGTGCTGGATGAGGCTGAGGTCGGAGCGACTGAGTTCGGCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: SASSRCFCSCSCCCC*CWMRLRSERLSSAL Trigger: TAGAGCCGAACTCAGTCGCTCCGACCTCAGCCTCATCCAGCAGCAGCAGCAGCAGCAGCTGCAAGAGCAAAAGCAGCGGGAGGAGGCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
||
| CDS-3UTR CAA 90 bp | ACAGGCTCAGGAGACGGGGAACACAACCCCTGGAATCCCAGGCTGTTCTTCTCCCACCTCCACAACGGCTaGGCTCAGGTACTGGCGACT | + |
|
Preference number: 5 (lower is better) Translates to: TGSGDGEHNPWNPRLFFSHLHNG*AQVLAT Trigger: AGTCGCCAGTACCTGAGCCAAGCCGTTGTGGAGGTG...GGAGAAGAACAGCCTGGGATTCCAGGGGTTGTGTTCCCCGTCTCCTGAGCCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| CDS GCA 90 bp | TGGGCCACAGGCTTTCCATCAAGAGACACAAACCAAGCCCTGGGATaGGGAGGCTTGCCTTTGGACAGCTCCAGGAGGGTCTGCTCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: WATGFPSRDTNQALG*GGLPLDSSRRVCSE Trigger: TTCAGAGCAGACCCTCCTGGAGCTGTCCAAAGGCAAGCCTCCGCATCCCAGGGCTTGGTTTGTGTCTCTTGATGGAAAGCCTGTGGCCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| CDS GCA 90 bp | ATGCGGGATCCTCGGGGGAGCAGACGGTGGTTCCACTCTCGCTGCTaGTCAGGTCTAAGTCTTCCAGGTAAAGGATCTTGGGCTGATGCA | + |
|
Preference number: 5 (lower is better) Translates to: MRDPRGSRRWFHSRC*SGLSLPGKGSWADA Trigger: TGCATCAGCCCAAGATCCTTTACCTGGAAGACTTAGACCTGAGCAGCAGCGAGAGTGGAACCACCGTCTGCTCCCCCGAGGATCCCGCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
||
| CDS CCA 90 bp | TCACTTGGGCCACAGGCTTTCCATCAAGAGACACAAACCAAGCCCTaGGATGCGGAGGCTTGCCTTTGGACAGCTCCAGGAGGGTCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: SLGPQAFHQETQTKP*DAEACLWTAPGGSA Trigger: AGCAGACCCTCCTGGAGCTGTCCAAAGGCAAGCCTCCGCATCCCAGGGCTTGGTTTGTGTCTCTTGATGGAAAGCCTGTGGCCCAAGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
||
| CDS-3UTR CAA 90 bp | CACAACCCCTGGAATCCCAGGCTGTTCTTCTCCAACCGTTCCAAAGCATCAGCATGCGGAGGCTTGCCTTaGGACAGCTCCAGGAGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: HNPWNPRLFFSNRSKASACGGLP*DSSRRV Trigger: GACCCTCCTGGAGCTGTCCAAAGGCAAGCCTCCGCA...TGCTGATGCTTTGGAACGGTTGGAGAAGAACAGCCTGGGATTCCAGGGGTTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| CDS GCA 90 bp | TCAATGCGGGATCCTCGGGGGAGCAGACGGTGGTTCCACTCTCGCTaGTGCTCAGGTCTAAGTCTTCCAGGTAAAGGATCTTGGGCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: SMRDPRGSRRWFHSR*CSGLSLPGKGSWAD Trigger: ATCAGCCCAAGATCCTTTACCTGGAAGACTTAGACCTGAGCAGCAGCGAGAGTGGAACCACCGTCTGCTCCCCCGAGGATCCCGCATTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
||
| CDS CCA 90 bp | CTTCTAAGATGTGCCTCAATGCGGGATCCTCGGGGGAGCAGACGGTaGTTCCACTCTCGCTGCTGCTCAGGTCTAAGTCTTCCAGGTAAA | + |
|
Preference number: 5 (lower is better) Translates to: LLRCASMRDPRGSRR*FHSRCCSGLSLPGK Trigger: TTTACCTGGAAGACTTAGACCTGAGCAGCAGCGAGAGTGGAACCACCGTCTGCTCCCCCGAGGATCCCGCATTGAGGCACATCTTAGAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
||
| CDS CCA 90 bp | CATCAAGAGACACAAACCAAGCCCTGGGATGCGGAGGCTTGCCTTTaGACAGCTCCAGGAGGGTCTGCTCTGAAATTCCTTGAAGTTCCG | + |
|
Preference number: 5 (lower is better) Translates to: HQETQTKPWDAEACL*TAPGGSALKFLEVP Trigger: CGGAACTTCAAGGAATTTCAGAGCAGACCCTCCTGGAGCTGTCCAAAGGCAAGCCTCCGCATCCCAGGGCTTGGTTTGTGTCTCTTGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
||
| CDS GCA 90 bp | GCTTTCCATCAAGAGACACAAACCAAGCCCTGGGATGCGGAGGCTTaGCTTTGGACAGCTCCAGGAGGGTCTGCTCTGAAATTCCTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: AFHQETQTKPWDAEA*LWTAPGGSALKFLE Trigger: TTCAAGGAATTTCAGAGCAGACCCTCCTGGAGCTGTCCAAAGGCAAGCCTCCGCATCCCAGGGCTTGGTTTGTGTCTCTTGATGGAAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
||
| CDS CCA 90 bp | GGGATGGCAAGCTCTGCTGACCTTCAAGTACAATGTCTTCTTCTCTaGCATCTGGGGCCTGGACGTGAGAATGCATCGGCATTTTGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: GMASSADLQVQCLLL*HLGPGRENASAFWA Trigger: TGCCCAAAATGCCGATGCATTCTCACGTCCAGGCCCCAGATGCCAGAGAAGAAGACATTGTACTTGAAGGTCAGCAGAGCTTGCCATCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| CDS TCA 90 bp | TTGGAATATCGGCTCCAATCTGAGGTCTGGGATGGCAAGCTCTGCTaGCCTTCAAGTACAATGTCTTCTTCTCTGGCATCTGGGGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LEYRLQSEVWDGKLC*PSSTMSSSLASGAW Trigger: CCAGGCCCCAGATGCCAGAGAAGAAGACATTGTACTTGAAGGTCAGCAGAGCTTGCCATCCCAGACCTCAGATTGGAGCCGATATTCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
||
| CDS-3UTR CAA 90 bp | ACAGGCTCAGGAGACGGGGAACACAACCCCTGGAATCCCAGGCTGTTCTTCTCCATCAATACTGCTCCATaGCTTCTGGTGACTGTAGAA | + |
|
Preference number: 5 (lower is better) Translates to: TGSGDGEHNPWNPRLFFSINTAP*LLVTVE Trigger: TTCTACAGTCACCAGAAGCAATGGAGCAGTATTGAT...GGAGAAGAACAGCCTGGGATTCCAGGGGTTGTGTTCCCCGTCTCCTGAGCCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| CDS-3UTR CAA 90 bp | CTCAGTCCCAGCTTCCTAAGAAGTTCACACTGCAATTTACAAGAAGCAGAAGACCTGGGATGCGGAGGCTaGCCTTTGGACAGCTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LSPSFLRSSHCNLQEAEDLGCGG*PLDSSR Trigger: CCTGGAGCTGTCCAAAGGCAAGCCTCCGCATCCCAG...GTCTTCTGCTTCTTGTAAATTGCAGTGTGAACTTCTTAGGAAGCTGGGACTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
||
| CDS CCA 90 bp | ACAACGGCTTGGCTCAGGTACTGGCGACTGACGATGTCATTGACCTaGACTTTCAGCATAAATACGGACACTGGAGCCACCAAAGTAGAG | + |
|
Preference number: 5 (lower is better) Translates to: TTAWLRYWRLTMSLT*TFSINTDTGATKVE Trigger: CTCTACTTTGGTGGCTCCAGTGTCCGTATTTATGCTGAAAGTCCAGGTCAATGACATCGTCAGTCGCCAGTACCTGAGCCAAGCCGTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| CDS-3UTR CAA 90 bp | AGGCATGATGAAGATACCTGCCTTTCTAAGACAAGGCAGAGGCAAGATTTTGGACTCCTCCCGCTGCTTTaGCTCTTGCAGCTGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RHDEDTCLSKTRQRQDFGLLPLL*LLQLLL Trigger: CAGCAGCAGCTGCAAGAGCAAAAGCAGCGGGAGGAG...TCCAAAATCTTGCCTCTGCCTTGTCTTAGAAAGGCAGGTATCTTCATCATGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
||
| CDS-3UTR CAA 90 bp | AACCATTTCTTCCCACCCAAAGAAAAGGGCGAGCTGCTGTACAAATGTGTCCTAGTCTTGCTATCTCTTTaGGCTAGTGGCGGTGGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: NHFFPPKEKGELLYKCVLVLLSL*ASGGGR Trigger: CCGGCCACCGCCACTAGCCAAAAGAGATAGCAAGAC...TAGGACACATTTGTACAGCAGCTCGCCCTTTTCTTTGGGTGGGAAGAAATGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| CDS TCA 90 bp | GGCTTGCCTTTGGACAGCTCCAGGAGGGTCTGCTCTGAAATTCCTTaGAGTTCCGATGAAAAGGGGGTCATCACCACAGCTTCATTTAGA | + |
|
Preference number: 5 (lower is better) Translates to: GLPLDSSRRVCSEIP*SSDEKGVITTASFR Trigger: TCTAAATGAAGCTGTGGTGATGACCCCCTTTTCATCGGAACTTCAAGGAATTTCAGAGCAGACCCTCCTGGAGCTGTCCAAAGGCAAGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| CDS CCA 90 bp | CAAGCTCTGCTGACCTTCAAGTACAATGTCTTCTTCTCTGGCATCTaGGGCCTGGACGTGAGAATGCATCGGCATTTTGGGCAATGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: QALLTFKYNVFFSGI*GLDVRMHRHFGQCL Trigger: CAAACATTGCCCAAAATGCCGATGCATTCTCACGTCCAGGCCCCAGATGCCAGAGAAGAAGACATTGTACTTGAAGGTCAGCAGAGCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
||
| CDS TCA 90 bp | AACAGACACAGACTCCAACAAGCTGTTGGAATATCGGCTCCAATCTaGGGTCTGGGATGGCAAGCTCTGCTGACCTTCAAGTACAATGTC | + |
|
Preference number: 5 (lower is better) Translates to: NRHRLQQAVGISAPI*GLGWQALLTFKYNV Trigger: GACATTGTACTTGAAGGTCAGCAGAGCTTGCCATCCCAGACCTCAGATTGGAGCCGATATTCCAACAGCTTGTTGGAGTCTGTGTCTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| CDS CCA 90 bp | CTTCATTTAGAGTTCCAGGAACAGACACAGACTCCAACAAGCTGTTaGAATATCGGCTCCAATCTGAGGTCTGGGATGGCAAGCTCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: LHLEFQEQTQTPTSC*NIGSNLRSGMASSA Trigger: AGCAGAGCTTGCCATCCCAGACCTCAGATTGGAGCCGATATTCCAACAGCTTGTTGGAGTCTGTGTCTGTTCCTGGAACTCTAAATGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| CDS TCA 90 bp | CCTTCAAGTACAATGTCTTCTTCTCTGGCATCTGGGGCCTGGACGTaGGAATGCATCGGCATTTTGGGCAATGTTTGTGTAAAGTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: PSSTMSSSLASGAWT*ECIGILGNVCVKFS Trigger: AGAGAACTTTACACAAACATTGCCCAAAATGCCGATGCATTCTCACGTCCAGGCCCCAGATGCCAGAGAAGAAGACATTGTACTTGAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| CDS-3UTR CAA 90 bp | AACCATTTCTTCCCACCCAAAGAAAAGGGCGAGCTGCTGTACAAATGTGTCCTACGACTGACGATGTCATaGACCTGGACTTTCAGCATA | + |
|
Preference number: 5 (lower is better) Translates to: NHFFPPKEKGELLYKCVLRLTMS*TWTFSI Trigger: TATGCTGAAAGTCCAGGTCAATGACATCGTCAGTCG...TAGGACACATTTGTACAGCAGCTCGCCCTTTTCTTTGGGTGGGAAGAAATGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| CDS-3UTR CAA 90 bp | CAAAGGAAAATGAACAAGGAAACGCCTGGGAACAAGAGGGCACGACGTCAGCTCTTGAAAACTGAACACTaGGTTGAGATTTGGCATCAG | + |
|
Preference number: 5 (lower is better) Translates to: QRKMNKETPGNKRARRQLLKTEH*VEIWHQ Trigger: CTGATGCCAAATCTCAACCAAGTGTTCAGTTTTCAA...GAGCTGACGTCGTGCCCTCTTGTTCCCAGGCGTTTCCTTGTTCATTTTCCTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| CDS-3UTR CAA 90 bp | CAAAGGAAAATGAACAAGGAAACGCCTGGGAACAAGAGGGCACGACGTCAGCTCGAGGAAGTTTTGGCATaGAACAACTGTGGTTTATCT | + |
|
Preference number: 5 (lower is better) Translates to: QRKMNKETPGNKRARRQLEEVLA*NNCGLS Trigger: AGATAAACCACAGTTGTTCAATGCCAAAACTTCCTC...GAGCTGACGTCGTGCCCTCTTGTTCCCAGGCGTTTCCTTGTTCATTTTCCTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| CDS GCA 90 bp | GTTATGCTCCTTGACTGTTCCCCAACCGTGATGCACCCAAACACCTaGATTCATATCAAATGTCCAAGCAGGTATCCGATCTCCTATTTT | + |
|
Preference number: 5 (lower is better) Translates to: VMLLDCSPTVMHPNT*IHIKCPSRYPISYF Trigger: AAAATAGGAGATCGGATACCTGCTTGGACATTTGATATGAATGCAGGTGTTTGGGTGCATCACGGTTGGGGAACAGTCAAGGAGCATAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| CDS-3UTR CAA 90 bp | CAAAGGAAAATGAACAAGGAAACGCCTGGGAACAAGAGGGCACGACGTCAGCTCTATGATTTATATGTGTaGTCGAGGTTGTCTGATCTC | + |
|
Preference number: 5 (lower is better) Translates to: QRKMNKETPGNKRARRQLYDLYV*SRLSDL Trigger: GAGATCAGACAACCTCGACAACACATATAAATCATA...GAGCTGACGTCGTGCCCTCTTGTTCCCAGGCGTTTCCTTGTTCATTTTCCTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| CDS-3UTR CAA 90 bp | AACCATTTCTTCCCACCCAAAGAAAAGGGCGAGCTGCTGTACAAATGTGTCCTAGACGGGGAGAGATTGTaGTTAATATGCTTAGGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: NHFFPPKEKGELLYKCVLDGERL*LICLGC Trigger: ACAGCCTAAGCATATTAACAACAATCTCTCCCCGTC...TAGGACACATTTGTACAGCAGCTCGCCCTTTTCTTTGGGTGGGAAGAAATGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| CDS-3UTR CAA 90 bp | AACCATTTCTTCCCACCCAAAGAAAAGGGCGAGCTGCTGTACAAATGTGTCCTATTAGTGGGGGATGTGTaGGCTTCAAAATCTTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: NHFFPPKEKGELLYKCVLLVGDV*ASKSST Trigger: TGTGGAAGATTTTGAAGCCAACACATCCCCCACTAA...TAGGACACATTTGTACAGCAGCTCGCCCTTTTCTTTGGGTGGGAAGAAATGGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| CDS TCA 90 bp | AATGTGGTGCATCATAGGTCCAAATCAAATGACTGTTATGCTCCTTaGCTGTTCCCCAACCGTGATGCACCCAAACACCTGCATTCATAT | + |
|
Preference number: 5 (lower is better) Translates to: NVVHHRSKSNDCYAP*LFPNRDAPKHLHSY Trigger: ATATGAATGCAGGTGTTTGGGTGCATCACGGTTGGGGAACAGTCAAGGAGCATAACAGTCATTTGATTTGGACCTATGATGCACCACATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| CDS-3UTR CAA 90 bp | ATGTTATTAATCCTCCTAACGCAAGTCTTAGTCAAAGGCACTTCCACAGAGCACTCTAGACTCGTATCATaGCTCTGGGTTCTCTTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: MLLILLTQVLVKGTSTEHSRLVS*LWVLLP Trigger: AGGCAAGAGAACCCAGAGCAATGATACGAGTCTAGA...GTGCTCTGTGGAAGTGCCTTTGACTAAGACTTGCGTTAGGAGGATTAATAACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| CDS-3UTR CAA 90 bp | AGGCATGATGAAGATACCTGCCTTTCTAAGACAAGGCAGAGGCAAGATTTTGGATCTCCAGCTTTCTGCTaGACTGATGCTCGTTCATAT | + |
|
Preference number: 5 (lower is better) Translates to: RHDEDTCLSKTRQRQDFGSPAFC*TDARSY Trigger: ATATGAACGAGCATCAGTCAAGCAGAAAGCTGGAGA...TCCAAAATCTTGCCTCTGCCTTGTCTTAGAAAGGCAGGTATCTTCATCATGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| CDS TCA 90 bp | CACACATATTGCAGCATGAGGAGTCAACTCAACATTTTCCAAACCTaGTTTATAAGTGACTCCAGTCGCAGGCAGAAAACTGTCCACCTT | + |
|
Preference number: 5 (lower is better) Translates to: HTYCSMRSQLNIFQT*FISDSSRRQKTVHL Trigger: AAGGTGGACAGTTTTCTGCCTGCGACTGGAGTCACTTATAAATCAGGTTTGGAAAATGTTGAGTTGACTCCTCATGCTGCAATATGTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| CDS-3UTR CAA 90 bp | ATGTTATTAATCCTCCTAACGCAAGTCTTAGTCAAAGGCACTTCCACAGAGCACCAAAGAGCCATATATTaGCTTGGCTTTGCGGGAACA | + |
|
Preference number: 5 (lower is better) Translates to: MLLILLTQVLVKGTSTEHQRAIY*LGFAGT Trigger: TGTTCCCGCAAAGCCAAGCAAATATATGGCTCTTTG...GTGCTCTGTGGAAGTGCCTTTGACTAAGACTTGCGTTAGGAGGATTAATAACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
||
| CDS-3UTR CAA 90 bp | TCTGGAAACTGGCCTTTCTTTTCCTGCACGATTATACAGAATATCCATTTCCCTCACTGGTTCCATCAATaGGCCATAGACCAATTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SGNWPFFSCTIIQNIHFPHWFHQ*AIDQLS Trigger: GGACAATTGGTCTATGGCCAATTGATGGAACCAGTG...AGGGAAATGGATATTCTGTATAATCGTGCAGGAAAAGAAAGGCCAGTTTCCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| CDS-3UTR CAA 90 bp | AGGCATGATGAAGATACCTGCCTTTCTAAGACAAGGCAGAGGCAAGATTTTGGAATATTTTCACACATATaGCAGCATGAGGAGTCAACT | + |
|
Preference number: 5 (lower is better) Translates to: RHDEDTCLSKTRQRQDFGIFSHI*QHEEST Trigger: AGTTGACTCCTCATGCTGCAATATGTGTGAAAATAT...TCCAAAATCTTGCCTCTGCCTTGTCTTAGAAAGGCAGGTATCTTCATCATGCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
||
| CDS-3UTR CAA 90 bp | TATGATGTCTGCACACAGCAGAGGGTAACTCAAGCCATAGAAATAAACATGGAGGCTCCAAAGACTGTGTaGGGTTTCTTGAATAATTGT | + |
|
Preference number: 5 (lower is better) Translates to: YDVCTQQRVTQAIEINMEAPKTV*GFLNNC Trigger: ACAATTATTCAAGAAACCCAACACAGTCTTTGGAGC...CTCCATGTTTATTTCTATGGCTTGAGTTACCCTCTGCTGTGTGCAGACATCATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
||
| CDS-3UTR CAA 90 bp | ATGTTATTAATCCTCCTAACGCAAGTCTTAGTCAAAGGCACTTCCACAGAGCACTTCCAGATGTTAGTCTaGCTATCTCTTTTGGCTAGT | + |
|
Preference number: 5 (lower is better) Translates to: MLLILLTQVLVKGTSTEHFQMLV*LSLLAS Trigger: ACTAGCCAAAAGAGATAGCAAGACTAACATCTGGAA...GTGCTCTGTGGAAGTGCCTTTGACTAAGACTTGCGTTAGGAGGATTAATAACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| CDS-3UTR CAA 90 bp | ATGTTATTAATCCTCCTAACGCAAGTCTTAGTCAAAGGCACTTCCACAGAGCACCATTTTGGGCAATGTTaGTGTAAAGTTCTCTCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: MLLILLTQVLVKGTSTEHHFGQC*CKVLSV Trigger: AACAGAGAGAACTTTACACAAACATTGCCCAAAATG...GTGCTCTGTGGAAGTGCCTTTGACTAAGACTTGCGTTAGGAGGATTAATAACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
||
| CDS GCA 72 bp | GCCTCCTCCCGCTGCTTTTGCTCTTGCAGCTGCTGCTaGTGCTGCTGCTGGATGAGGCTGAGGTCGGAGCGA | + |
|
Preference number: 6 (lower is better) Translates to: ASSRCFCSCSCC*CCCWMRLRSER Trigger: TCGCTCCGACCTCAGCCTCATCCAGCAGCAGCAGCAGCAGCAGCTGCAAGAGCAAAAGCAGCGGGAGGAGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
||
| CDS GCA 72 bp | TCCTCCCGCTGCTTTTGCTCTTGCAGCTGCTGCTGCTaGTGCTGCTGGATGAGGCTGAGGTCGGAGCGACTG | + |
|
Preference number: 6 (lower is better) Translates to: SSRCFCSCSCCC*CCWMRLRSERL Trigger: CAGTCGCTCCGACCTCAGCCTCATCCAGCAGCAGCAGCAGCAGCAGCTGCAAGAGCAAAAGCAGCGGGAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
||
| CDS GCA 72 bp | TCCTCTGCCTCCTCCCGCTGCTTTTGCTCTTGCAGCTaGTGCTGCTGCTGCTGCTGGATGAGGCTGAGGTCG | + |
|
Preference number: 6 (lower is better) Translates to: SSASSRCFCSCS*CCCCCWMRLRS Trigger: CGACCTCAGCCTCATCCAGCAGCAGCAGCAGCAGCAGCTGCAAGAGCAAAAGCAGCGGGAGGAGGCAGAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
||
| CDS GCA 72 bp | CGCTGCTTTTGCTCTTGCAGCTGCTGCTGCTGCTGCTaGTGGATGAGGCTGAGGTCGGAGCGACTGAGTTCG | + |
|
Preference number: 6 (lower is better) Translates to: RCFCSCSCCCCC*WMRLRSERLSS Trigger: CGAACTCAGTCGCTCCGACCTCAGCCTCATCCAGCAGCAGCAGCAGCAGCAGCTGCAAGAGCAAAAGCAGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
||
| CDS GCA 72 bp | GGCTTTCCATCAAGAGACACAAACCAAGCCCTGGGATaGGGAGGCTTGCCTTTGGACAGCTCCAGGAGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: GFPSRDTNQALG*GGLPLDSSRRV Trigger: GACCCTCCTGGAGCTGTCCAAAGGCAAGCCTCCGCATCCCAGGGCTTGGTTTGTGTCTCTTGATGGAAAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| CDS GCA 72 bp | CCTCGGGGGAGCAGACGGTGGTTCCACTCTCGCTGCTaGTCAGGTCTAAGTCTTCCAGGTAAAGGATCTTGG | + |
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Preference number: 6 (lower is better) Translates to: PRGSRRWFHSRC*SGLSLPGKGSW Trigger: CCAAGATCCTTTACCTGGAAGACTTAGACCTGAGCAGCAGCGAGAGTGGAACCACCGTCTGCTCCCCCGAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| CDS GCA 72 bp | CAAGAGACACAAACCAAGCCCTGGGATGCGGAGGCTTaGCTTTGGACAGCTCCAGGAGGGTCTGCTCTGAAA | + |
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Preference number: 6 (lower is better) Translates to: QETQTKPWDAEA*LWTAPGGSALK Trigger: TTTCAGAGCAGACCCTCCTGGAGCTGTCCAAAGGCAAGCCTCCGCATCCCAGGGCTTGGTTTGTGTCTCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| CDS GCA 72 bp | GATCCTCGGGGGAGCAGACGGTGGTTCCACTCTCGCTaGTGCTCAGGTCTAAGTCTTCCAGGTAAAGGATCT | + |
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Preference number: 6 (lower is better) Translates to: DPRGSRRWFHSR*CSGLSLPGKGS Trigger: AGATCCTTTACCTGGAAGACTTAGACCTGAGCAGCAGCGAGAGTGGAACCACCGTCTGCTCCCCCGAGGATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| CDS CCA 72 bp | CCACAGGCTTTCCATCAAGAGACACAAACCAAGCCCTaGGATGCGGAGGCTTGCCTTTGGACAGCTCCAGGA | + |
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Preference number: 6 (lower is better) Translates to: PQAFHQETQTKP*DAEACLWTAPG Trigger: TCCTGGAGCTGTCCAAAGGCAAGCCTCCGCATCCCAGGGCTTGGTTTGTGTCTCTTGATGGAAAGCCTGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| CDS CAA 72 bp | GACACAAACCAAGCCCTGGGATGCGGAGGCTTGCCTTaGGACAGCTCCAGGAGGGTCTGCTCTGAAATTCCT | + |
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Preference number: 6 (lower is better) Translates to: DTNQALGCGGLP*DSSRRVCSEIP Trigger: AGGAATTTCAGAGCAGACCCTCCTGGAGCTGTCCAAAGGCAAGCCTCCGCATCCCAGGGCTTGGTTTGTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| CDS CAA 72 bp | AGTGGGCGTTCCTCTCGCTTCTTCCAGATGTTAGTCTaGCTATCTCTTTTGGCTAGTGGCGGTGGCCGGCCT | + |
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Preference number: 6 (lower is better) Translates to: SGRSSRFFQMLV*LSLLASGGGRP Trigger: AGGCCGGCCACCGCCACTAGCCAAAAGAGATAGCAAGACTAACATCTGGAAGAAGCGAGAGGAACGCCCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| CDS CCA 72 bp | TGGCTCAGGTACTGGCGACTGACGATGTCATTGACCTaGACTTTCAGCATAAATACGGACACTGGAGCCACC | + |
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Preference number: 6 (lower is better) Translates to: WLRYWRLTMSLT*TFSINTDTGAT Trigger: GGTGGCTCCAGTGTCCGTATTTATGCTGAAAGTCCAGGTCAATGACATCGTCAGTCGCCAGTACCTGAGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| CDS CAA 90 bp | ACCTCCACAACGGCTTGGCTCAGGTACTGGCGACTGACGATGTCATaGACCTGGACTTTCAGCATAAATACGGACACTGGAGCCACCAAA | + |
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Preference number: 6 (lower is better) Translates to: TSTTAWLRYWRLTMS*TWTFSINTDTGATK Trigger: TTTGGTGGCTCCAGTGTCCGTATTTATGCTGAAAGTCCAGGTCAATGACATCGTCAGTCGCCAGTACCTGAGCCAAGCCGTTGTGGAGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| CDS TCA 72 bp | CGGCTCCAATCTGAGGTCTGGGATGGCAAGCTCTGCTaGCCTTCAAGTACAATGTCTTCTTCTCTGGCATCT | + |
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Preference number: 6 (lower is better) Translates to: RLQSEVWDGKLC*PSSTMSSSLAS Trigger: AGATGCCAGAGAAGAAGACATTGTACTTGAAGGTCAGCAGAGCTTGCCATCCCAGACCTCAGATTGGAGCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| CDS TCA 72 bp | AGACTCCAACAAGCTGTTGGAATATCGGCTCCAATCTaGGGTCTGGGATGGCAAGCTCTGCTGACCTTCAAG | + |
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Preference number: 6 (lower is better) Translates to: RLQQAVGISAPI*GLGWQALLTFK Trigger: CTTGAAGGTCAGCAGAGCTTGCCATCCCAGACCTCAGATTGGAGCCGATATTCCAACAGCTTGTTGGAGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| CDS TCA 72 bp | TTGGACAGCTCCAGGAGGGTCTGCTCTGAAATTCCTTaGAGTTCCGATGAAAAGGGGGTCATCACCACAGCT | + |
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Preference number: 6 (lower is better) Translates to: LDSSRRVCSEIP*SSDEKGVITTA Trigger: AGCTGTGGTGATGACCCCCTTTTCATCGGAACTTCAAGGAATTTCAGAGCAGACCCTCCTGGAGCTGTCCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| CDS GCA 72 bp | GCGTCACCTAGCGACGGGGAGAGATTGTTGTTAATATaGTTAGGCTGTTTGCTCCCCATACTGGGCTCCAAA | + |
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Preference number: 6 (lower is better) Translates to: ASPSDGERLLLI*LGCLLPILGSK Trigger: TTTGGAGCCCAGTATGGGGAGCAAACAGCCTAAGCATATTAACAACAATCTCTCCCCGTCGCTAGGTGACGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| CDS CCA 72 bp | TTAACAAACACCTCCACAACGGCTTGGCTCAGGTACTaGCGACTGACGATGTCATTGACCTGGACTTTCAGC | + |
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Preference number: 6 (lower is better) Translates to: LTNTSTTAWLRY*RLTMSLTWTFS Trigger: GCTGAAAGTCCAGGTCAATGACATCGTCAGTCGCCAGTACCTGAGCCAAGCCGTTGTGGAGGTGTTTGTTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| CDS CCA 72 bp | CTGACCTTCAAGTACAATGTCTTCTTCTCTGGCATCTaGGGCCTGGACGTGAGAATGCATCGGCATTTTGGG | + |
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Preference number: 6 (lower is better) Translates to: LTFKYNVFFSGI*GLDVRMHRHFG Trigger: CCCAAAATGCCGATGCATTCTCACGTCCAGGCCCCAGATGCCAGAGAAGAAGACATTGTACTTGAAGGTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| CDS CCA 72 bp | GAGTTCCAGGAACAGACACAGACTCCAACAAGCTGTTaGAATATCGGCTCCAATCTGAGGTCTGGGATGGCA | + |
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Preference number: 6 (lower is better) Translates to: EFQEQTQTPTSC*NIGSNLRSGMA Trigger: TGCCATCCCAGACCTCAGATTGGAGCCGATATTCCAACAGCTTGTTGGAGTCTGTGTCTGTTCCTGGAACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| CDS CAA 72 bp | ACGGCTTGGCTCAGGTACTGGCGACTGACGATGTCATaGACCTGGACTTTCAGCATAAATACGGACACTGGA | + |
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Preference number: 6 (lower is better) Translates to: TAWLRYWRLTMS*TWTFSINTDTG Trigger: TCCAGTGTCCGTATTTATGCTGAAAGTCCAGGTCAATGACATCGTCAGTCGCCAGTACCTGAGCCAAGCCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| CDS CAA 72 bp | CGTCTTCGAGTAGTTAACAAACACCTCCACAACGGCTaGGCTCAGGTACTGGCGACTGACGATGTCATTGAC | + |
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Preference number: 6 (lower is better) Translates to: RLRVVNKHLHNG*AQVLATDDVID Trigger: GTCAATGACATCGTCAGTCGCCAGTACCTGAGCCAAGCCGTTGTGGAGGTGTTTGTTAACTACTCGAAGACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| CDS TCA 72 bp | ACCTCTTCGGTCCCTGTAAGGTATCTCTTTTCCTCTTaGGCGTCACCTAGCGACGGGGAGAGATTGTTGTTA | + |
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Preference number: 6 (lower is better) Translates to: TSSVPVRYLFSS*ASPSDGERLLL Trigger: TAACAACAATCTCTCCCCGTCGCTAGGTGACGCTCAAGAGGAAAAGAGATACCTTACAGGGACCGAAGAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| CDS CAA 72 bp | GACGGGGAGAGATTGTTGTTAATATGCTTAGGCTGTTaGCTCCCCATACTGGGCTCCAAAGACTGTGTTGGG | + |
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Preference number: 6 (lower is better) Translates to: DGERLLLICLGC*LPILGSKDCVG Trigger: CCCAACACAGTCTTTGGAGCCCAGTATGGGGAGCAAACAGCCTAAGCATATTAACAACAATCTCTCCCCGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| CDS TCA 72 bp | ACAATGTCTTCTTCTCTGGCATCTGGGGCCTGGACGTaGGAATGCATCGGCATTTTGGGCAATGTTTGTGTA | + |
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Preference number: 6 (lower is better) Translates to: TMSSSLASGAWT*ECIGILGNVCV Trigger: TACACAAACATTGCCCAAAATGCCGATGCATTCTCACGTCCAGGCCCCAGATGCCAGAGAAGAAGACATTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| CDS GCA 72 bp | CTTGACTGTTCCCCAACCGTGATGCACCCAAACACCTaGATTCATATCAAATGTCCAAGCAGGTATCCGATC | + |
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Preference number: 6 (lower is better) Translates to: LDCSPTVMHPNT*IHIKCPSRYPI Trigger: GATCGGATACCTGCTTGGACATTTGATATGAATGCAGGTGTTTGGGTGCATCACGGTTGGGGAACAGTCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| CDS CCA 72 bp | GGCTGGGGATGGAGCTGCTATCCAGTAGCCCAAATGTaGTGCATCATAGGTCCAAATCAAATGACTGTTATG | + |
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Preference number: 6 (lower is better) Translates to: GWGWSCYPVAQM*CIIGPNQMTVM Trigger: CATAACAGTCATTTGATTTGGACCTATGATGCACCACATTTGGGCTACTGGATAGCAGCTCCATCCCCAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| CDS CAA 90 bp | TGTAGAATTCGTCTTCGAGTAGTTAACAAACACCTCCACAACGGCTaGGCTCAGGTACTGGCGACTGACGATGTCATTGACCTGGACTTT | + |
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Preference number: 6 (lower is better) Translates to: CRIRLRVVNKHLHNG*AQVLATDDVIDLDF Trigger: AAAGTCCAGGTCAATGACATCGTCAGTCGCCAGTACCTGAGCCAAGCCGTTGTGGAGGTGTTTGTTAACTACTCGAAGACGAATTCTACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| CDS CAA 90 bp | TCACCTAGCGACGGGGAGAGATTGTTGTTAATATGCTTAGGCTGTTaGCTCCCCATACTGGGCTCCAAAGACTGTGTTGGGTTTCTTGAA | + |
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Preference number: 6 (lower is better) Translates to: SPSDGERLLLICLGC*LPILGSKDCVGFLE Trigger: TTCAAGAAACCCAACACAGTCTTTGGAGCCCAGTATGGGGAGCAAACAGCCTAAGCATATTAACAACAATCTCTCCCCGTCGCTAGGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| CDS CAA 90 bp | ATCTGGGGCCTGGACGTGAGAATGCATCGGCATTTTGGGCAATGTTaGTGTAAAGTTCTCTCTGTTCACTGGTTCCATCAATTGGCCATA | + |
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Preference number: 6 (lower is better) Translates to: IWGLDVRMHRHFGQC*CKVLSVHWFHQLAI Trigger: TATGGCCAATTGATGGAACCAGTGAACAGAGAGAACTTTACACAAACATTGCCCAAAATGCCGATGCATTCTCACGTCCAGGCCCCAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| CDS CAA 72 bp | CTGGACGTGAGAATGCATCGGCATTTTGGGCAATGTTaGTGTAAAGTTCTCTCTGTTCACTGGTTCCATCAA | + |
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Preference number: 6 (lower is better) Translates to: LDVRMHRHFGQC*CKVLSVHWFHQ Trigger: TTGATGGAACCAGTGAACAGAGAGAACTTTACACAAACATTGCCCAAAATGCCGATGCATTCTCACGTCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| CDS TCA 72 bp | TGCAGCATGAGGAGTCAACTCAACATTTTCCAAACCTaGTTTATAAGTGACTCCAGTCGCAGGCAGAAAACT | + |
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Preference number: 6 (lower is better) Translates to: CSMRSQLNIFQT*FISDSSRRQKT Trigger: AGTTTTCTGCCTGCGACTGGAGTCACTTATAAATCAGGTTTGGAAAATGTTGAGTTGACTCCTCATGCTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| CDS CCA 72 bp | ATCAAAACGGTGTCTTCAAAGAGCCATATATTTGCTTaGCTTTGCGGGAACAGTGAAAGTGTAACTGAAGAA | + |
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Preference number: 6 (lower is better) Translates to: IKTVSSKSHIFA*LCGNSESVTEE Trigger: TTCTTCAGTTACACTTTCACTGTTCCCGCAAAGCCAAGCAAATATATGGCTCTTTGAAGACACCGTTTTGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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| CDS GCA 72 bp | ACGGTGTCTTCAAAGAGCCATATATTTGCTTGGCTTTaGGGGAACAGTGAAAGTGTAACTGAAGAATATATT | + |
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Preference number: 6 (lower is better) Translates to: TVSSKSHIFAWL*GNSESVTEEYI Trigger: AATATATTCTTCAGTTACACTTTCACTGTTCCCGCAAAGCCAAGCAAATATATGGCTCTTTGAAGACACCGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051454.4 |
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